HG10013167 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013167
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	cyclic nucleotide-gated ion channel 1-like
Location	Chr01: 27453369 .. 27453764 (+)
RNA-Seq Expression	HG10013167
Synteny	HG10013167

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTAGGTTCTACTCTCATCAATGGAAAGTATGGGCAGCCTACAAAATACAAGAAGTTTGGCATGATTACTGCGAAAGAAAGCGGAGGGGGGGTGGAGATGGTAGGTTTCAAGATGCATTAGCTAAAAAAGTTGGCACCTCGGTGAGCTTTAGTGCCACTCTGTATGCATCCATATTCATATCCCATCTACTGCAAGCCGTGCAGGGAGATCAACCCCCAGCAAACTGCCCAAGTCACACGAGTGATGACACTATTGGCGCCTCCAAAGCCAGACAAAGAGCAAGACAAACCAAACTTCACCATCATGGATCTTTAAAATGTATTGTTTCAAGCTCTTTAACCTTCTATGTCCTGAGTTTTAGGTGCTTGGTTTCTCTGTGTGATATGTGA

mRNA sequence

ATGTTCTCTAGGTTCTACTCTCATCAATGGAAAGTATGGGCAGCCTACAAAATACAAGAAGTTTGGCATGATTACTGCGAAAGAAAGCGGAGGGGGGGTGGAGATGGTAGGTTTCAAGATGCATTAGCTAAAAAAGTTGGCACCTCGGTGAGCTTTAGTGCCACTCTGTATGCATCCATATTCATATCCCATCTACTGCAAGCCGTGCAGGGAGATCAACCCCCAGCAAACTGCCCAAGTCACACGAGTGATGACACTATTGGCGCCTCCAAAGCCAGACAAAGAGCAAGACAAACCAAACTTCACCATCATGGATCTTTAAAATGTATTGTTTCAAGCTCTTTAACCTTCTATGTCCTGAGTTTTAGGTGCTTGGTTTCTCTGTGTGATATGTGA

Coding sequence (CDS)

ATGTTCTCTAGGTTCTACTCTCATCAATGGAAAGTATGGGCAGCCTACAAAATACAAGAAGTTTGGCATGATTACTGCGAAAGAAAGCGGAGGGGGGGTGGAGATGGTAGGTTTCAAGATGCATTAGCTAAAAAAGTTGGCACCTCGGTGAGCTTTAGTGCCACTCTGTATGCATCCATATTCATATCCCATCTACTGCAAGCCGTGCAGGGAGATCAACCCCCAGCAAACTGCCCAAGTCACACGAGTGATGACACTATTGGCGCCTCCAAAGCCAGACAAAGAGCAAGACAAACCAAACTTCACCATCATGGATCTTTAAAATGTATTGTTTCAAGCTCTTTAACCTTCTATGTCCTGAGTTTTAGGTGCTTGGTTTCTCTGTGTGATATGTGA

Protein sequence

MFSRFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFISHLLQAVQGDQPPANCPSHTSDDTIGASKARQRARQTKLHHHGSLKCIVSSSLTFYVLSFRCLVSLCDM

Homology

[Close]

BLAST of HG10013167 vs. NCBI nr
Match: XP_022147437.1 (LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27
Identity = 62/70 (88.57%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYKIQE WHDYCERKRRGGGDGRFQDALAK  G S SF ATLYASIFIS
Sbjct: 613 RFYSHQWKVWAAYKIQEAWHDYCERKRRGGGDGRFQDALAKTAGASASFGATLYASIFIS 672

Query: 64  HLLQAVQGDQ 74
           HLLQ VQ DQ
Sbjct: 673 HLLQVVQRDQ 682

[Close]

BLAST of HG10013167 vs. NCBI nr
Match: XP_038884413.1 (cyclic nucleotide-gated ion channel 1-like [Benincasa hispida] >XP_038884420.1 cyclic nucleotide-gated ion channel 1-like [Benincasa hispida])

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-27
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYKIQE WHD+ ERKRRGGGDGRFQDALAK VG SVSFSATLYASIFIS
Sbjct: 627 RFYSHQWKVWAAYKIQEAWHDHTERKRRGGGDGRFQDALAKTVGPSVSFSATLYASIFIS 686

Query: 64  HLLQAVQGDQ 74
           HLLQ VQ DQ
Sbjct: 687 HLLQTVQRDQ 696

[Close]

BLAST of HG10013167 vs. NCBI nr
Match: XP_022147438.1 (cyclic nucleotide-gated ion channel 1-like [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 61/70 (87.14%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYKIQE WHDYCERKRRGGGD RFQ ALAK VG S SF ATLYASIFIS
Sbjct: 612 RFYSHQWKVWAAYKIQEAWHDYCERKRRGGGDSRFQGALAKTVGASASFGATLYASIFIS 671

Query: 64  HLLQAVQGDQ 74
           HLLQ VQ DQ
Sbjct: 672 HLLQVVQRDQ 681

[Close]

BLAST of HG10013167 vs. NCBI nr
Match: XP_008437903.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+VWAAYKIQE W DY ERKRRGGGDGRFQDALAK VGTS +FSATLYASIFIS
Sbjct: 593 RFYSHQWRVWAAYKIQEAWEDYRERKRRGGGDGRFQDALAKIVGTSANFSATLYASIFIS 652

Query: 64  HLLQAVQGDQP 75
           +LLQ+VQ DQP
Sbjct: 653 YLLQSVQRDQP 663

[Close]

BLAST of HG10013167 vs. NCBI nr
Match: XP_022938348.1 (cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-25
Identity = 59/76 (77.63%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYK+QE WHDY ERK+RGGGDGRFQDALAK VG S SF ATLYAS+FIS
Sbjct: 553 RFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKTVGVSASFGATLYASMFIS 612

Query: 64  HLLQAVQGDQPPANCP 80
           +LL AVQ DQ     P
Sbjct: 613 YLLLAVQRDQHQKTAP 628

[Close]

BLAST of HG10013167 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGG---GDGRFQDALAKKV-GTSVSFSATLYAS 63
           R+YS QWK WAA  IQ  W  Y ++K        + R QDALAK+  G+S S  AT+YAS
Sbjct: 615 RYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYAS 674

Query: 64  IFISHLLQAVQ 71
            F +++L+ ++
Sbjct: 675 RFAANILRTIR 685

[Close]

BLAST of HG10013167 vs. ExPASy Swiss-Prot
Match: Q8RWS9 (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-06
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+ WAA  IQ  W  YC+RK+    +       +   G S S  A   A+ F +
Sbjct: 627 RFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTAGPSYSIGAAFLATKFAA 686

Query: 64  HLLQAV 70
           + L+ +
Sbjct: 687 NALRTI 692

[Close]

BLAST of HG10013167 vs. ExPASy Swiss-Prot
Match: Q9LD40 (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-06
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGG---GDGRFQDALAKK---VGTSVSFSATLY 63
           RFYS QW+ W A  IQ  W  +C RK        + RF++A+ K+     +S S  ATLY
Sbjct: 603 RFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVATLY 662

Query: 64  ASIFISHLLQAVQGDQPPANCPSHTSDD 86
           AS F S+ L+ ++ +  P   P  +  D
Sbjct: 663 ASRFASNALRNLRTNNLPLLPPKPSEPD 690

[Close]

BLAST of HG10013167 vs. ExPASy Swiss-Prot
Match: Q8GWD2 (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana OX=3702 GN=CNGC12 PE=2 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-05
Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           R YS QW+ WAA+ IQ  W  +C+RK       + +D      GT ++ ++TLY S F+S
Sbjct: 558 RLYSQQWRSWAAFFIQAAWRKHCKRKL-----SKTRDNENIPQGTQLNLASTLYVSRFVS 617

Query: 64  HLLQAVQGDQPPANCPS 81
             LQ  + D   A+C S
Sbjct: 618 KALQNRRKD--TADCSS 627

[Close]

BLAST of HG10013167 vs. ExPASy Swiss-Prot
Match: Q9SKD7 (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 27/79 (34.18%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGG---GDGRFQDALAK--KVGTSVSFSATLYA 63
           RFYS QW+ WAA  IQ  W  +C RK        +G+  + L      G  ++  A +YA
Sbjct: 604 RFYSVQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYA 663

Query: 64  SIFISHLLQAVQGDQPPAN 78
           S F SH L+ ++ +    N
Sbjct: 664 SRFASHALRNLRANAAARN 682

[Close]

BLAST of HG10013167 vs. ExPASy TrEMBL
Match: A0A6J1D2C8 (LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like OS=Momordica charantia OX=3673 GN=LOC111016362 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.5e-28
Identity = 62/70 (88.57%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYKIQE WHDYCERKRRGGGDGRFQDALAK  G S SF ATLYASIFIS
Sbjct: 613 RFYSHQWKVWAAYKIQEAWHDYCERKRRGGGDGRFQDALAKTAGASASFGATLYASIFIS 672

Query: 64  HLLQAVQGDQ 74
           HLLQ VQ DQ
Sbjct: 673 HLLQVVQRDQ 682

[Close]

BLAST of HG10013167 vs. ExPASy TrEMBL
Match: A0A6J1D1B4 (cyclic nucleotide-gated ion channel 1-like OS=Momordica charantia OX=3673 GN=LOC111016363 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.3e-27
Identity = 61/70 (87.14%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYKIQE WHDYCERKRRGGGD RFQ ALAK VG S SF ATLYASIFIS
Sbjct: 612 RFYSHQWKVWAAYKIQEAWHDYCERKRRGGGDSRFQGALAKTVGASASFGATLYASIFIS 671

Query: 64  HLLQAVQGDQ 74
           HLLQ VQ DQ
Sbjct: 672 HLLQVVQRDQ 681

[Close]

BLAST of HG10013167 vs. ExPASy TrEMBL
Match: A0A1S3AVQ5 (cyclic nucleotide-gated ion channel 1-like OS=Cucumis melo OX=3656 GN=LOC103483193 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+VWAAYKIQE W DY ERKRRGGGDGRFQDALAK VGTS +FSATLYASIFIS
Sbjct: 593 RFYSHQWRVWAAYKIQEAWEDYRERKRRGGGDGRFQDALAKIVGTSANFSATLYASIFIS 652

Query: 64  HLLQAVQGDQP 75
           +LLQ+VQ DQP
Sbjct: 653 YLLQSVQRDQP 663

[Close]

BLAST of HG10013167 vs. ExPASy TrEMBL
Match: A0A6J1FDS7 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444588 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 59/76 (77.63%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYK+QE WHDY ERK+RGGGDGRFQDALAK VG S SF ATLYAS+FIS
Sbjct: 594 RFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKTVGVSASFGATLYASMFIS 653

Query: 64  HLLQAVQGDQPPANCP 80
           +LL AVQ DQ     P
Sbjct: 654 YLLLAVQRDQHQKTAP 669

[Close]

BLAST of HG10013167 vs. ExPASy TrEMBL
Match: A0A6J1FIM7 (cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444588 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 59/76 (77.63%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQWKVWAAYK+QE WHDY ERK+RGGGDGRFQDALAK VG S SF ATLYAS+FIS
Sbjct: 553 RFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKTVGVSASFGATLYASMFIS 612

Query: 64  HLLQAVQGDQPPANCP 80
           +LL AVQ DQ     P
Sbjct: 613 YLLLAVQRDQHQKTAP 628

[Close]

BLAST of HG10013167 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGG---GDGRFQDALAKKV-GTSVSFSATLYAS 63
           R+YS QWK WAA  IQ  W  Y ++K        + R QDALAK+  G+S S  AT+YAS
Sbjct: 615 RYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYAS 674

Query: 64  IFISHLLQAVQ 71
            F +++L+ ++
Sbjct: 675 RFAANILRTIR 685

[Close]

BLAST of HG10013167 vs. TAIR 10
Match: AT5G57940.1 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+ WAA  IQ  W  YC+RK+    +       +   G S S  A   A+ F +
Sbjct: 627 RFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTAGPSYSIGAAFLATKFAA 686

Query: 64  HLLQAV 70
           + L+ +
Sbjct: 687 NALRTI 692

[Close]

BLAST of HG10013167 vs. TAIR 10
Match: AT5G57940.3 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+ WAA  IQ  W  YC+RK+    +       +   G S S  A   A+ F +
Sbjct: 620 RFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTAGPSYSIGAAFLATKFAA 679

Query: 64  HLLQAV 70
           + L+ +
Sbjct: 680 NALRTI 685

[Close]

BLAST of HG10013167 vs. TAIR 10
Match: AT5G57940.2 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07
Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGGGDGRFQDALAKKVGTSVSFSATLYASIFIS 63
           RFYSHQW+ WAA  IQ  W  YC+RK+    +       +   G S S  A   A+ F +
Sbjct: 627 RFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTAGPSYSIGAAFLATKFAA 686

Query: 64  HLLQAV 70
           + L+ +
Sbjct: 687 NALRTI 692

[Close]

BLAST of HG10013167 vs. TAIR 10
Match: AT4G01010.1 (cyclic nucleotide-gated channel 13 )

HSP 1 Score: 51.6 bits (122), Expect = 5.5e-07
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 4   RFYSHQWKVWAAYKIQEVWHDYCERKRRGG---GDGRFQDALAKK---VGTSVSFSATLY 63
           RFYS QW+ W A  IQ  W  +C RK        + RF++A+ K+     +S S  ATLY
Sbjct: 603 RFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVATLY 662

Query: 64  ASIFISHLLQAVQGDQPPANCPSHTSDD 86
           AS F S+ L+ ++ +  P   P  +  D
Sbjct: 663 ASRFASNALRNLRTNNLPLLPPKPSEPD 690

The following BLAST results are available for this feature:

BLAST of HG10013167 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147437.1	1.6e-27	88.57	LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like [Momordica chara...	[more]
XP_038884413.1	4.5e-27	90.00	cyclic nucleotide-gated ion channel 1-like [Benincasa hispida] >XP_038884420.1 c...	[more]
XP_022147438.1	1.7e-26	87.14	cyclic nucleotide-gated ion channel 1-like [Momordica charantia]	[more]
XP_008437903.1	5.0e-26	85.92	PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo]	[more]
XP_022938348.1	2.5e-25	77.63	cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of HG10013167 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65717	1.1e-07	43.66	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q8RWS9	4.6e-06	36.36	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LD40	7.8e-06	36.36	Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8GWD2	2.3e-05	37.66	Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SKD7	2.5e-04	34.18	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of HG10013167 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2C8	7.5e-28	88.57	LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like OS=Momordica cha...	[more]
A0A6J1D1B4	8.3e-27	87.14	cyclic nucleotide-gated ion channel 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3AVQ5	2.4e-26	85.92	cyclic nucleotide-gated ion channel 1-like OS=Cucumis melo OX=3656 GN=LOC1034831...	[more]
A0A6J1FDS7	1.2e-25	77.63	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]
A0A6J1FIM7	1.2e-25	77.63	cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucurbita moschata OX=3...	[more]

BLAST of HG10013167 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53130.1	7.7e-09	43.66	cyclic nucleotide gated channel 1	[more]
AT5G57940.1	3.3e-07	36.36	cyclic nucleotide gated channel 5	[more]
AT5G57940.3	3.3e-07	36.36	cyclic nucleotide gated channel 5	[more]
AT5G57940.2	3.3e-07	36.36	cyclic nucleotide gated channel 5	[more]
AT4G01010.1	5.5e-07	36.36	cyclic nucleotide-gated channel 13	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013167.1	HG10013167.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005216	ion channel activity