HG10013089 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTAGCTTTCAATGGCGTAGGGCTCGATCGTATCGTATCGTCTTCTACCTCATCTGTCTGTTTTCGTGGTGAGTCAAATTTCTGCATTCTTACTCCGCAAATCCATACAAAAATGAAAAGATTTCCTTTGTTTTCTTTCAATTTTTGGTTTCTTTTTGATTCACCAGTCCGATGCTCGCAGAGTTTGAAACTGATGCCCTCGAATTTCAGCTTTCTCGCTCTTTACCCCTTCTCTGCTTTTATTCAATTTCATTTTTCAACTCCTTTACCTAATTTCTAAAAGAAGTAATGGTATTATGACATTTTGTTTTGTCTCTCTCTCTCTTTCCGAGGCATTTATTGTCACAACTTTCGATTGCCCAGTGAGATAAAGTTAACTCTGTTTTGTTTCAGTATTTACCTATTTTAGTTTAGACTCATTTTGACTTCGATTATTGTTGAAATCCTGTGAATTATTGGCTTCTGTTTATAGTGGCGGATAGATACTATCAGTGAATAATTCCTATTATTAAGATTTAATCTTATCTTAAATAGCATATACAAAAACGAAATCTGTCCAATTTTAGTTAGGAAAAAGGTATGGTCGATGTATTTGTTTATTTTAGACACACATACACGTTTTGTAATTTAACTTTATCTTAATCAAAGGGAAGGTTTCTCACAATTTAGAGTTTCCTACTAAAATTAAGCAGGAAAGTTCACTGATTATGAAGTTCTAGACTTCTAGTTGAAGAAATCAAGTTCGTTTTGTTTATTGTTTAGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGGAAGAGGAAGTTTTGAAAGACCCACAGGGGAACAGTGGTGAAGGCCTGGTCTTGTCATGGTATGTCCCGTACTCTGTATATCATTTTCATCATAATAAATGCGTCTCAAATCTCTCTCTGTTCAATAAATGCTCGTCTGCATTGTGAGAATCCGCATTAAATTCTTCTCCTTATTCGCTTATTTCTTATATCAGTTGTGCGTAATTGTAAAACCTCAGAATAAGAAACCTCTGCATTAACTCCCTCAATTTTTTTGGACAAATTTTACTTTCAATGATGATTCAATTCTTACTATGCTCAACCATGTCAGTATTTATTGCAAGAACCAGCTTGAAACTAGCTGATTCTTGTCCTTCCCCTTCAGACTCACATAGCCATTAATTTCCTCTTTTCATTTCAGTTCATTGAGATAACCCCTTTCACATGGCTTCCCTCCTCCCTTTGTAATTCGCTCTGAAAAGTTGATGCTCTAAGGAAGGATCTGGATTTTGTTCTTTCACTCTTGGTCACTTGAAAGGGTGTCTCTGCCTCTGGTAGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTTTAGTGATCCAAATTTTCCGCTAGTTTCCCACTTGCCATCTCTCATTCTGCAGTCTCTTTTTATTATTTTTACTTCTGGAACTTATTCCTTCCTTCATAACTTCGAAATTTATTGTAACTGGAGTGATTAAAGAAATGGAAAAAGAAGGAAGAAGAAGAAGCTTGAGTAGTTAGTCCTTTACCTTGCCATTTTCCTTTTCACTTTCCCAATATCCCACCGTTCTCCTTTCTCCGATCTCATAGATTTAACGACAGCTATGTCTTGTGCTTTGTTACCAAATAATGTGCAGAAAATGGTTCTAGCATCAGTTTGAATCTTTTGTTCTGGTAAATTTGTTTTTCTGTATAGACGTTCTGTGTGCCCGGCAAATGATGCTAAACATAAGACAATAATTTTTTTTCTTCCCTGCAAACTCTTCTCCTGTCAAGGAATGCCTACCTGCCTCGACCATCCTTCAAAATAAGAATAGTTGGTCTTTTGATTTATCTTTAGAGTTCCCTATTTCATCTCCAGTGTAATCCATGAGATTCCGAGTTTGGTCACCTGGACTGGACATTTTTATACTCAAACTTACTCTGTTCAATATCCTAGTTCTTACACATGGGAAGCACCAATTATTTTCATTTACAATTGGGAGGGAACGATTTTTGTCTTATGTTCTACATGTTTTTTATTTTGTCTCTCACATTGGCTGGGATGGTCTGTCTACGTGATTTGTTTATTTTAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGATGCTTCATTGTTTCTTCCTGAATGTTATCGTAGATTTGGCTACTTCAATTTATGACATCTTTTGTTTAATCGCCTCTGAACTACTATTTAGTTCAAATTATGTTTATGGTCCCTTTTGTTTAATCGTCTGATATTTGCTATATGTTTATGCTGTACTACACACGAGTAACAATTAGATATTTGACTATAGCTGACTACGTTAGTGGTCTTTCTTTCTGACTTTCTGCTCTAGAGAAAGATATTTAGCTCGTGTTTGGCCGTTGGAACCCCTTTCAAGAAAACTCAAGTCTAAGTCTTGACTCTAAATAGAAGTTTGTAGAACCTGCAGGCCAGTCATGCTAATTGGTTGTTTGCTTTATCTGAGGTTTGGAGACTTTTTGAAAATCACAAAAAAAATCAACATTCTCGGGCTATCTACTTCTTGAACACGTTTTAGGATGGAATGGGAAAATTGTTTCTCTTCAACTATTTGCTGCTTTATGGATGTTGTTTGATGGAGTTTTACGGATCAAATCCTTGCAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGGACAGATAATGAAATCAAAAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCATTGGCATTGATCCACAGACACATGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCGGCATCTCCAACCACCCGCCACATGGCGCAGTGGGAGAGTGCTCGGCTTGAAGCTGAAGCGCGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGATGACAAAACCACATGCCAAAGCCAAAGTCCCCTATCCTCATCGATTAAATGTGAGTCGCTTTTCATTGTTGCAACTCACAACAGAGTTGATTACACCGGTTCCTCAGCCATGGAAAGCAATGAAAATGAAGAAACAGAATACAAAAACTTCCAATCCATGGCTGACATTGTGATGTCCAAATCTGATTCATCTAGTGCGAACGAGTTCGAGGACTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGATATGAGCTTCTTGGAAGAAAACATAAACACGCAGCAGCATCTGCTTTAG ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTAGCTTTCAATGGCGTAGGGCTCGATCGTATCGTATCGTCTTCTACCTCATCTGTCTGTTTTCGTGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGGAAGAGGAAGTTTTGAAAGACCCACAGGGGAACAGTGGTGAAGGCCTGGTCTTGTCATGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGGACAGATAATGAAATCAAAAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCATTGGCATTGATCCACAGACACATGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCGGCATCTCCAACCACCCGCCACATGGCGCAGTGGGAGAGTGCTCGGCTTGAAGCTGAAGCGCGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGATGACAAAACCACATGCCAAAGCCAAAGTCCCCTATCCTCATCGATTAAATGTGAGTCGCTTTTCATTGTTGCAACTCACAACAGAGTTGATTACACCGGTTCCTCAGCCATGGAAAGCAATGAAAATGAAGAAACAGAATACAAAAACTTCCAATCCATGGCTGACATTGTGATGTCCAAATCTGATTCATCTAGTGCGAACGAGTTCGAGGACTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGATATGAGCTTCTTGGAAGAAAACATAAACACGCAGCAGCATCTGCTTTAG ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTAGCTTTCAATGGCGTAGGGCTCGATCGTATCGTATCGTCTTCTACCTCATCTGTCTGTTTTCGTGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGGAAGAGGAAGTTTTGAAAGACCCACAGGGGAACAGTGGTGAAGGCCTGGTCTTGTCATGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGGACAGATAATGAAATCAAAAACTTATGGAACACCCACCTCAAGAAACGTCTTCTTTGCATTGGCATTGATCCACAGACACATGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCGGCATCTCCAACCACCCGCCACATGGCGCAGTGGGAGAGTGCTCGGCTTGAAGCTGAAGCGCGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGATGACAAAACCACATGCCAAAGCCAAAGTCCCCTATCCTCATCGATTAAATGTGAGTCGCTTTTCATTGTTGCAACTCACAACAGAGTTGATTACACCGGTTCCTCAGCCATGGAAAGCAATGAAAATGAAGAAACAGAATACAAAAACTTCCAATCCATGGCTGACATTGTGATGTCCAAATCTGATTCATCTAGTGCGAACGAGTTCGAGGACTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGATATGAGCTTCTTGGAAGAAAACATAAACACGCAGCAGCATCTGCTTTAG MAPNSNQQSQELLVLVAFNGVGLDRIVSSSTSSVCFRAIRLEEGRGKREEEVLKDPQGNSGEGLVLSCESCEMGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDSDFFLQIWNSEVGESFRRCRDDKTTCQSQSPLSSSIKCESLFIVATHNRVDYTGSSAMESNENEETEYKNFQSMADIVMSKSDSSSANEFEDSSDSALGLLLDFPINNDMSFLEENINTQQHLL Homology
BLAST of HG10013089 vs. NCBI nr
Match: XP_004133870.1 (transcription factor MYB17 [Cucumis sativus] >KGN56561.2 hypothetical protein Csa_011566 [Cucumis sativus]) HSP 1 Score: 597.0 bits (1538), Expect = 1.1e-166 Identity = 295/304 (97.04%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of HG10013089 vs. NCBI nr
Match: XP_016898895.1 (PREDICTED: transcription repressor MYB6 [Cucumis melo] >KAA0048976.1 transcription repressor MYB6 [Cucumis melo var. makuwa] >TYK17590.1 transcription repressor MYB6 [Cucumis melo var. makuwa]) HSP 1 Score: 597.0 bits (1538), Expect = 1.1e-166 Identity = 294/304 (96.71%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of HG10013089 vs. NCBI nr
Match: XP_038884956.1 (transcription factor MYB17 [Benincasa hispida] >XP_038884962.1 transcription factor MYB17 [Benincasa hispida]) HSP 1 Score: 591.3 bits (1523), Expect = 6.0e-165 Identity = 289/303 (95.38%), Postives = 295/303 (97.36%), Query Frame = 0
BLAST of HG10013089 vs. NCBI nr
Match: KAG6582606.1 (Transcription factor MYB17, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 581.6 bits (1498), Expect = 4.7e-162 Identity = 283/295 (95.93%), Postives = 290/295 (98.31%), Query Frame = 0
BLAST of HG10013089 vs. NCBI nr
Match: XP_023526750.1 (transcription factor MYB41-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 577.8 bits (1488), Expect = 6.8e-161 Identity = 281/295 (95.25%), Postives = 289/295 (97.97%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy Swiss-Prot
Match: Q9M2D9 (Transcription factor MYB17 OS=Arabidopsis thaliana OX=3702 GN=MYB17 PE=1 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 8.6e-98 Identity = 192/303 (63.37%), Postives = 226/303 (74.59%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 9.2e-68 Identity = 123/170 (72.35%), Postives = 141/170 (82.94%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.6e-64 Identity = 119/170 (70.00%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy Swiss-Prot
Match: Q9S9Z2 (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55 Identity = 94/129 (72.87%), Postives = 111/129 (86.05%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy Swiss-Prot
Match: Q9SBF3 (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.2e-54 Identity = 90/129 (69.77%), Postives = 109/129 (84.50%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy TrEMBL
Match: A0A5D3D1U6 (Transcription repressor MYB6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004600 PE=4 SV=1) HSP 1 Score: 597.0 bits (1538), Expect = 5.3e-167 Identity = 294/304 (96.71%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy TrEMBL
Match: A0A1S4DT66 (transcription repressor MYB6 OS=Cucumis melo OX=3656 GN=LOC103484167 PE=4 SV=1) HSP 1 Score: 597.0 bits (1538), Expect = 5.3e-167 Identity = 294/304 (96.71%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy TrEMBL
Match: A0A6J1ITE6 (transcription factor MYB41-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479755 PE=4 SV=1) HSP 1 Score: 577.8 bits (1488), Expect = 3.3e-161 Identity = 281/295 (95.25%), Postives = 289/295 (97.97%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy TrEMBL
Match: A0A6J1ECF6 (transcription factor MYB41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431942 PE=4 SV=1) HSP 1 Score: 577.8 bits (1488), Expect = 3.3e-161 Identity = 281/295 (95.25%), Postives = 289/295 (97.97%), Query Frame = 0
BLAST of HG10013089 vs. ExPASy TrEMBL
Match: A0A6J1D0Y2 (transcription factor MYB41 OS=Momordica charantia OX=3673 GN=LOC111016284 PE=4 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 1.4e-159 Identity = 279/306 (91.18%), Postives = 293/306 (95.75%), Query Frame = 0
BLAST of HG10013089 vs. TAIR 10
Match: AT3G61250.1 (myb domain protein 17 ) HSP 1 Score: 358.6 bits (919), Expect = 6.1e-99 Identity = 192/303 (63.37%), Postives = 226/303 (74.59%), Query Frame = 0
BLAST of HG10013089 vs. TAIR 10
Match: AT3G01140.1 (myb domain protein 106 ) HSP 1 Score: 252.7 bits (644), Expect = 4.7e-67 Identity = 120/167 (71.86%), Postives = 138/167 (82.63%), Query Frame = 0
BLAST of HG10013089 vs. TAIR 10
Match: AT5G15310.1 (myb domain protein 16 ) HSP 1 Score: 248.1 bits (632), Expect = 1.2e-65 Identity = 119/170 (70.00%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of HG10013089 vs. TAIR 10
Match: AT5G15310.2 (myb domain protein 16 ) HSP 1 Score: 248.1 bits (632), Expect = 1.2e-65 Identity = 119/170 (70.00%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of HG10013089 vs. TAIR 10
Match: AT3G02940.1 (myb domain protein 107 ) HSP 1 Score: 219.5 bits (558), Expect = 4.4e-57 Identity = 93/129 (72.09%), Postives = 112/129 (86.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|