HG10013034 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013034
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	F-box family protein
Location	Chr01: 26302500 .. 26304421 (-)
RNA-Seq Expression	HG10013034
Synteny	HG10013034

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATATGATTGGTTCAAGGAAGATGGATACTATGATGAGACAACCATATTGGACTTGGAAACGAGTCCCTCAATCAAGGTGCCCCCATCAACTCTTACCTTTTTTATCATTCATTGTTCTAAAATTATCTATATTGATATCTTTCTTTTTCAAATTATGAATGAATGAATTATTACCGGTTAAATAAGTTATAGGTAAAATTAATTTTCTTAAAGAATTTTTGAGAGAGTTGTGAAATGAGAGACTTATCTGATTGTAATCTTCATTCCAGCACCTTGCTAATAAGATTGAACTGCCTAGACCCTCATCTTTCTTAGAATAAAGAAAAGCTTTCTTAGAGTTAAGATTTTCAAAAATCTCAATCATTAGATATGAGATTGACAAATTCTGAACTTTAAAGGTAAAAATCAACGCAATTCTTGGACAACAAAAAGCTTTGAAAGGCATTCAAGATCTATCAAAGTTGCCCAAGATAGTGACAGAAGAAGAGAAGGAAAAGATTATGAAAATTATTGTTCTAAATCTCAATGATTTTGTATTAAAACAAGTAATTGATAAAGTAACTCCATATGAACTATGGATGAAGCTAGAGGGAAAGATTCTTTACGTAGAAAGGAACTTCCCAATAAATCATACTTAAGGGAAAGATTCTTTACATACAAGACGGATGCAAGTGAAACATTTCTCATAATCTAAATGATTTCAAAAGAATATAACTTGAGAATTTAAATATATGAAAGTTCAAATTGGTGAAGAAAATGAAGCTTTCATATTAATTGAACTCTTTGCCAGATTCAACTCCTTCTATCCGATCTTTGGGGACCTTCATCCAACTCCTTCCATAAGCGGTTCTAGAAAAAGTTTGATCTATTTTCTTAAAACTAAGGACCAAACTTTAAATAAGTTTAAAGAATGGAAGATACTTATTGAAAAACATACCTTTAAAGAAATTGAATACTTGAAAACTAACAATGAGCTAGCATTTAGTGGAGAAGAGTTTAATTCTTATTACTGATAACAAGGAATAACAAGACATCGAAATGTAAGGTACACTCTATGGCAAAATGGTGTAGCAGAAAGATTAAATCATACAATAATGGAACGTGTTAGATATGTTTACTGTCAAATACCTTAGTGCGAGAAAGGTTTTGGGCAGAAGTTGCCTCTTATGCTATCTATATATACTCTAAATAGAACTTCTCATGTGACCATGTCTCAACTAATTTATCTAAAACTAGCGTACTAGATACAAAATTAAAAGTTTAGGCTTCATTTGATAATCATTTACTTCCATTTGAGTTTTCATTATTCATTTTCTACAAATGTTTCAAAAACCAAGTCAAATTTTTTAAAAAAATAAATTTGATAAAAAAATTAGTGTTTCTACCATAAACATGAAACTCATGTAAATGTTTATTATTTATATTATATTCAAGTGAAGTTTGATTGTTTTTTTCTTACTTTGATATTAGATCTATCAAAATATGAAAATCTCGATGAAAATTTAATATTATAGTTATAAGTACAAGTTTTCTCGCGCTGCTGATGTGGAGTTCGAAAGTCGAATTCAAATGAAAGGGAAGATAGAAGCCAAAATCTTGAGTCCAAAAACCTACTATGGAGCTTATTTTGTGTTCAAGTTTGAGGAGATGATAGAAGAACCTTTAGAAACTTTTCGTCCCTTTAAACCAATTCTACCATACCTTTATCTTGGAAGAGAGGAGGAGAAGAAGAGAAAGCAGGCTTTTGAAGGTTTTCCTATGGAAAGAGAAGATGGATGGATGGAGCTTAAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATATTTATCCCACTTGTTTACCATGTAGGTTCATTTTTGAAGGAATTGAGTTTAGGCCAATCTCTAAAGATATTGAATAA

mRNA sequence

ATGTTATATGATTGGTTCAAGGAAGATGGATACTATGATGAGACAACCATATTGGACTTGGAAACGAGTCCCTCAATCAAGTTTTCTCGCGCTGCTGATGTGGAGTTCGAAAGTCGAATTCAAATGAAAGGGAAGATAGAAGCCAAAATCTTGAGTCCAAAAACCTACTATGGAGCTTATTTTGTGTTCAAGTTTGAGGAGATGATAGAAGAACCTTTAGAAACTTTTCGTCCCTTTAAACCAATTCTACCATACCTTTATCTTGGAAGAGAGGAGGAGAAGAAGAGAAAGCAGGCTTTTGAAGGTTTTCCTATGGAAAGAGAAGATGGATGGATGGAGCTTAAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATATTTATCCCACTTGTTTACCATGTAGGTTCATTTTTGAAGGAATTGAGTTTAGGCCAATCTCTAAAGATATTGAATAA

Coding sequence (CDS)

ATGTTATATGATTGGTTCAAGGAAGATGGATACTATGATGAGACAACCATATTGGACTTGGAAACGAGTCCCTCAATCAAGTTTTCTCGCGCTGCTGATGTGGAGTTCGAAAGTCGAATTCAAATGAAAGGGAAGATAGAAGCCAAAATCTTGAGTCCAAAAACCTACTATGGAGCTTATTTTGTGTTCAAGTTTGAGGAGATGATAGAAGAACCTTTAGAAACTTTTCGTCCCTTTAAACCAATTCTACCATACCTTTATCTTGGAAGAGAGGAGGAGAAGAAGAGAAAGCAGGCTTTTGAAGGTTTTCCTATGGAAAGAGAAGATGGATGGATGGAGCTTAAGATGGGCCAATTTTTTACCCAAGGAGATGATCTCTCAATTATTTTCAATATTTATCCCACTTGTTTACCATGTAGGTTCATTTTTGAAGGAATTGAGTTTAGGCCAATCTCTAAAGATATTGAATAA

Protein sequence

MLYDWFKEDGYYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKMGQFFTQGDDLSIIFNIYPTCLPCRFIFEGIEFRPISKDIE

Homology

[Close]

BLAST of HG10013034 vs. NCBI nr
Match: XP_011650883.2 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650311.1 hypothetical protein Csa_009925 [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-11
Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRP 80
           ++ P+ +FS  A++++   +++KGKIE + LSPKT Y AYFVFK   ++E+      F  
Sbjct: 125 QSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFK---LVEDNFCRHVFET 184

Query: 81  FKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDGWMELKMGQFFTQ-GDDLSII 140
               L   + G E EE +RK+      EG     +ER DGWME++MG+FF + GDD SII
Sbjct: 185 TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 244

Query: 141 FNI--YPTCLPCRFIFEGIEFRP 151
           F++           I EG+E RP
Sbjct: 245 FHLMQIDRLRKGGLIVEGVEIRP 264

[Close]

BLAST of HG10013034 vs. NCBI nr
Match: XP_004134378.3 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical protein Csa_010742 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-11
Identity = 56/144 (38.89%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRP 80
           ++ P+ +F   A++     +++KGKIE + LSPKT Y AYFVFKF+E     +   T   
Sbjct: 125 QSIPTSRFPEVAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGT--- 184

Query: 81  FKPILPYLYLGREE--EKKRKQAF----EGFPM---EREDGWMELKMGQFFTQ-GDDLSI 140
            KP+   +Y   EE  E   K       EG P+   ER DGWME++MG+FF + GDD  +
Sbjct: 185 -KPVSLEVYFEGEEVGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMV 244

Query: 141 IFNI--YPTCLPCRFIFEGIEFRP 151
           IF++      +    I EGIE RP
Sbjct: 245 IFHLKQIDGIIKGGLIVEGIEIRP 264

[Close]

BLAST of HG10013034 vs. NCBI nr
Match: XP_031282159.1 (F-box protein At2g02240-like [Pistacia vera])

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-10
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPIL 83
           P  +F   A+++     ++KGKIE K+LSP+T Y AY VFKF +      +T    +P+ 
Sbjct: 127 PESRFPEVAELKPVCWFEVKGKIETKLLSPETTYAAYLVFKFADS-RNGFDT----RPVE 186

Query: 84  PYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKMGQFFTQ-GDDLSIIFNIYP- 143
              Y+G  EE++R + F     G P    +R DGWME+++G+FF + G++  +++N++  
Sbjct: 187 LCFYVGGMEEEERSKVFLDARAGAPNLSQDRGDGWMEIEIGEFFKKHGENEGVVYNLFDF 246

Query: 144 --TCLPCRFIFEGIEFRPIS 153
                    I EGIE RP S
Sbjct: 247 DGFSSKHGLIIEGIELRPKS 261

[Close]

BLAST of HG10013034 vs. NCBI nr
Match: XP_023528482.1 (putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-10
Identity = 54/142 (38.03%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 22  TSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPF 81
           ++P  +FS  A+++    +++KG+IEA+ LSP+T Y AY VFK   ++E+  +   FR  
Sbjct: 126 SNPISRFSEVAELQTVWWLEIKGRIEARNLSPQTNYAAYLVFK---LVEDRYQRRGFRE- 185

Query: 82  KPILPYLYLGREEEKKRKQAF----EGFPM---EREDGWMELKMGQFFTQ-GDDLSIIFN 141
           +P+L  +Y    E ++ K A     EG  +   ER DGWME++MG+ F + GDD SIIF+
Sbjct: 186 RPVLLRVYFEGAEVEEGKMAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDGSIIFH 245

Query: 142 I---YPTCLPCRFIFEGIEFRP 151
           +   +        I EGIE RP
Sbjct: 246 LKEFHDFITKSGLIVEGIEIRP 263

[Close]

BLAST of HG10013034 vs. NCBI nr
Match: XP_022960303.1 (F-box protein PP2-B11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-10
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFK 80
           E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   K
Sbjct: 129 EHDPQSRFGVVARLDHVWWLEIEGRIEARKLSLKTNYAAHFVFK----LTEEAQVFER-K 188

Query: 81  PILPYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKMGQFFT-QGDDLSIIFNI 140
           P+   +Y   ++ ++ KQ      EG P    ER+DGWME+ MG+F+   GDD SIIFN+
Sbjct: 189 PVKLRVYSEGDDTQEAKQVLLEPPEGAPTQIRERQDGWMEVHMGEFYNHSGDDGSIIFNL 248

Query: 141 YPTC-LPCR-FIFEGIEFRPIS 153
                 P +  I EGIE RP++
Sbjct: 249 QQLARSPYQGLIVEGIEIRPVN 265

[Close]

BLAST of HG10013034 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLET 83
           P  +F++ A++      +++GK  A++LSP T Y AY VFK ++         +E  L  
Sbjct: 178 PESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGL 237

Query: 84  FRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMELKMGQFFTQGDDLSIIFNIYP 143
                      ++G  + + R++  +   P +REDGWME ++G+FF +     I F++  
Sbjct: 238 VGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIE 297

Query: 144 TCLP---CRFIFEGIEFRP 151
              P      I +GIEFRP
Sbjct: 298 IKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of HG10013034 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 40/140 (28.57%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETF 83
           P  +F + A +      +++G+   ++LSP+T Y AY VFK       F+ +  E     
Sbjct: 131 PESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGV 190

Query: 84  RPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKMGQFFTQG---DDLSIIFNIY 143
              +P    +       + R+   +  P +REDGWME+++G+FF  G   D+  I  +  
Sbjct: 191 VGQEPSRRLICFSEAIRRGRRNVVK--PKQREDGWMEIELGEFFNDGGIMDNDEIEMSAL 250

Query: 144 PT---CLPCRFIFEGIEFRP 151
            T      C  I +GIE RP
Sbjct: 251 ETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of HG10013034 vs. ExPASy Swiss-Prot
Match: Q9C7J9 (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-08
Identity = 47/174 (27.01%), Postives = 77/174 (44.25%), Query Frame = 0


Query: 11  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--- 70
           Y D  +          +FS +A++    R+++KGKI+  +LSP T YGAY + K      
Sbjct: 108 YSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAY 167

Query: 71  -MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFEG------------------- 130
            +   P ET    K         YL    E++++ K+ F G                   
Sbjct: 168 GLDLVPAETSVKSKNGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKR 227

Query: 131 -FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI 152
             P  R+DGW+E+++G+F T +G+D  +   +  +    L    + +GIE RPI
Sbjct: 228 REPKARDDGWLEIELGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRPI 281

[Close]

BLAST of HG10013034 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08
Identity = 40/132 (30.30%), Postives = 61/132 (46.21%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPIL 83
           P  +F   A +      +++GKI   +LS  T Y AY VFK +EM     E+     P+ 
Sbjct: 120 PDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESL----PLE 179

Query: 84  PYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFTQGDDLSIIFNIYPT---CLP 143
                 R E    ++ F   G    REDGW+E+++G+++   DD  I  ++  T      
Sbjct: 180 VSFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWK 239

Query: 144 CRFIFEGIEFRP 151
              I +GIE RP
Sbjct: 240 GGIIVQGIEIRP 247

[Close]

BLAST of HG10013034 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-06
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL--- 83
           P+ +F   A++     +++ GKI   +LS  T Y AYFVFK       F + +E  L   
Sbjct: 118 PNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLA 177

Query: 84  ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWMELKMGQFFTQGDDL-SIIFN 143
           +T      + P  + L ++   +  Q+    P+ R DGW E+++GQFF +  DL  I  +
Sbjct: 178 DTESTDNVVQPSMISLMQDSGGEEGQS----PVLRRDGWYEVELGQFFKRRGDLGEIEMS 237

Query: 144 IYPTCLPCR---FIFEGIEFRPI 152
           +  T  P      I  GIE RP+
Sbjct: 238 LKETKGPYEKKGLIVYGIEIRPV 256

[Close]

BLAST of HG10013034 vs. ExPASy TrEMBL
Match: A0A0A0L9G5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-12
Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPL--ETFRP 80
           ++ P+ +FS  A++++   +++KGKIE + LSPKT Y AYFVFK   ++E+      F  
Sbjct: 125 QSIPTSRFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFK---LVEDNFCRHVFET 184

Query: 81  FKPILPYLYLGRE-EEKKRKQA----FEGFP---MEREDGWMELKMGQFFTQ-GDDLSII 140
               L   + G E EE +RK+      EG     +ER DGWME++MG+FF + GDD SII
Sbjct: 185 TPVSLEVHFEGAEVEEDRRKRVILDPLEGSSVVCVERSDGWMEVEMGEFFNECGDDGSII 244

Query: 141 FNI--YPTCLPCRFIFEGIEFRP 151
           F++           I EG+E RP
Sbjct: 245 FHLMQIDRLRKGGLIVEGVEIRP 264

[Close]

BLAST of HG10013034 vs. ExPASy TrEMBL
Match: A0A0A0L445 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-10
Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--MIEEPLETFRP 80
           ++ P+ +F   A++     +++KGKIE + LSPKT Y AYFVFKF+E     +   T   
Sbjct: 125 QSIPTSRFPEVAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGT--- 184

Query: 81  FKPILPYLYLGREE--EKKRKQAF----EGFPM---EREDGWMELKMGQFFTQ-GDDLSI 140
            KP+   +Y   EE  E   K       EG P+   ER DGWME++MG+FF + GDD  +
Sbjct: 185 -KPVSLEVYFEGEEVGEDGTKMVLLDPPEGSPVVCKERSDGWMEVEMGEFFNELGDDGMV 244

Query: 141 IFNI--YPTCLPCRFIFEGIEFRP 151
           IF++      +    I EGIE  P
Sbjct: 245 IFHLKQIDGIIKGGLIVEGIEISP 264

[Close]

BLAST of HG10013034 vs. ExPASy TrEMBL
Match: A0A6J1H715 (F-box protein PP2-B11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461076 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-10
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFK 80
           E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   K
Sbjct: 131 EHDPQSRFGVVARLDHVWWLEIEGRIEARKLSLKTNYAAHFVFK----LTEEAQVFER-K 190

Query: 81  PILPYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKMGQFFT-QGDDLSIIFNI 140
           P+   +Y   ++ ++ KQ      EG P    ER+DGWME+ MG+F+   GDD SIIFN+
Sbjct: 191 PVKLRVYSEGDDTQEAKQVLLEPPEGAPTQIRERQDGWMEVHMGEFYNHSGDDGSIIFNL 250

Query: 141 YPTC-LPCR-FIFEGIEFRPIS 153
                 P +  I EGIE RP++
Sbjct: 251 QQLARSPYQGLIVEGIEIRPVN 267

[Close]

BLAST of HG10013034 vs. ExPASy TrEMBL
Match: A0A6J1H8G3 (F-box protein PP2-B11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461076 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-10
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 21  ETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFK 80
           E  P  +F   A ++    ++++G+IEA+ LS KT Y A+FVFK    + E  + F   K
Sbjct: 129 EHDPQSRFGVVARLDHVWWLEIEGRIEARKLSLKTNYAAHFVFK----LTEEAQVFER-K 188

Query: 81  PILPYLYLGREEEKKRKQAF----EGFP---MEREDGWMELKMGQFFT-QGDDLSIIFNI 140
           P+   +Y   ++ ++ KQ      EG P    ER+DGWME+ MG+F+   GDD SIIFN+
Sbjct: 189 PVKLRVYSEGDDTQEAKQVLLEPPEGAPTQIRERQDGWMEVHMGEFYNHSGDDGSIIFNL 248

Query: 141 YPTC-LPCR-FIFEGIEFRPIS 153
                 P +  I EGIE RP++
Sbjct: 249 QQLARSPYQGLIVEGIEIRPVN 265

[Close]

BLAST of HG10013034 vs. ExPASy TrEMBL
Match: A0A6J1EFS1 (putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10
Identity = 54/141 (38.30%), Postives = 82/141 (58.16%), Query Frame = 0


Query: 23  SPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLET--FRPFK 82
           +P  +FS  A+++    +++KG+IEA+ LSP+T Y AY VFK   ++E+  +   FR  +
Sbjct: 127 NPISRFSEVAELQMVWWLEIKGRIEARNLSPQTNYAAYLVFK---LVEDRYQRRGFRE-R 186

Query: 83  PILPYLYLGREEEKKRKQAF----EGFPM---EREDGWMELKMGQFFTQ-GDDLSIIFNI 142
           P+L  +Y    E ++ K A     EG  +   ER DGWME++MG+ F + GDD SIIF++
Sbjct: 187 PVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDGSIIFHL 246

Query: 143 ---YPTCLPCRFIFEGIEFRP 151
              +        I EGIE RP
Sbjct: 247 KEFHNFITKSGLIVEGIEIRP 263

[Close]

BLAST of HG10013034 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEM--------IEEPLET 83
           P  +F++ A++      +++GK  A++LSP T Y AY VFK ++         +E  L  
Sbjct: 178 PESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGL 237

Query: 84  FRPFKPILPYLYLGREEEKKRKQAFE-GFPMEREDGWMELKMGQFFTQGDDLSIIFNIYP 143
                      ++G  + + R++  +   P +REDGWME ++G+FF +     I F++  
Sbjct: 238 VGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCDEIEFSVIE 297

Query: 144 TCLP---CRFIFEGIEFRP 151
              P      I +GIEFRP
Sbjct: 298 IKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of HG10013034 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 40/140 (28.57%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPLETF 83
           P  +F + A +      +++G+   ++LSP+T Y AY VFK       F+ +  E     
Sbjct: 131 PESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGV 190

Query: 84  RPFKPILPYLYLGREEEKKRKQAFEGFPMEREDGWMELKMGQFFTQG---DDLSIIFNIY 143
              +P    +       + R+   +  P +REDGWME+++G+FF  G   D+  I  +  
Sbjct: 191 VGQEPSRRLICFSEAIRRGRRNVVK--PKQREDGWMEIELGEFFNDGGIMDNDEIEMSAL 250

Query: 144 PT---CLPCRFIFEGIEFRP 151
            T      C  I +GIE RP
Sbjct: 251 ETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of HG10013034 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09
Identity = 47/174 (27.01%), Postives = 77/174 (44.25%), Query Frame = 0


Query: 11  YYDETTILDLETSPSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEE--- 70
           Y D  +          +FS +A++    R+++KGKI+  +LSP T YGAY + K      
Sbjct: 108 YSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAY 167

Query: 71  -MIEEPLETFRPFK-----PILPYLYLGREEEKKRKQAFEG------------------- 130
            +   P ET    K         YL    E++++ K+ F G                   
Sbjct: 168 GLDLVPAETSVKSKNGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKR 227

Query: 131 -FPMEREDGWMELKMGQFFT-QGDDLSI---IFNIYPTCLPCRFIFEGIEFRPI 152
             P  R+DGW+E+++G+F T +G+D  +   +  +    L    + +GIE RPI
Sbjct: 228 REPKARDDGWLEIELGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRPI 281

[Close]

BLAST of HG10013034 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 58.2 bits (139), Expect = 7.1e-09
Identity = 40/132 (30.30%), Postives = 61/132 (46.21%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFKFEEMIEEPLETFRPFKPIL 83
           P  +F   A +      +++GKI   +LS  T Y AY VFK +EM     E+     P+ 
Sbjct: 120 PDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESL----PLE 179

Query: 84  PYLYLGREEEKKRKQAF--EGFPMEREDGWMELKMGQFFTQGDDLSIIFNIYPT---CLP 143
                 R E    ++ F   G    REDGW+E+++G+++   DD  I  ++  T      
Sbjct: 180 VSFRSTRTEVYNNRRVFLKSGTQESREDGWLEIELGEYYVGFDDEEIEMSVLETREGGWK 239

Query: 144 CRFIFEGIEFRP 151
              I +GIE RP
Sbjct: 240 GGIIVQGIEIRP 247

[Close]

BLAST of HG10013034 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 52.8 bits (125), Expect = 3.0e-07
Identity = 44/143 (30.77%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 24  PSIKFSRAADVEFESRIQMKGKIEAKILSPKTYYGAYFVFK-------FEEMIEEPL--- 83
           P+ +F   A++     +++ GKI   +LS  T Y AYFVFK       F + +E  L   
Sbjct: 118 PNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFRQPVETSLVLA 177

Query: 84  ETFRPFKPILP-YLYLGREEEKKRKQAFEGFPMEREDGWMELKMGQFFTQGDDL-SIIFN 143
           +T      + P  + L ++   +  Q+    P+ R DGW E+++GQFF +  DL  I  +
Sbjct: 178 DTESTDNVVQPSMISLMQDSGGEEGQS----PVLRRDGWYEVELGQFFKRRGDLGEIEMS 237

Query: 144 IYPTCLPCR---FIFEGIEFRPI 152
           +  T  P      I  GIE RP+
Sbjct: 238 LKETKGPYEKKGLIVYGIEIRPV 256

The following BLAST results are available for this feature:

BLAST of HG10013034 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650883.2	1.1e-11	39.16	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650311.1 hypothetical prot...	[more]
XP_004134378.3	4.1e-11	38.89	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8650310.1 hypothetical prot...	[more]
XP_031282159.1	1.6e-10	35.00	F-box protein At2g02240-like [Pistacia vera]	[more]
XP_023528482.1	2.1e-10	38.03	putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo]	[more]
XP_022960303.1	2.1e-10	38.03	F-box protein PP2-B11-like isoform X2 [Cucurbita moschata]	[more]

BLAST of HG10013034 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	1.5e-08	29.50	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ6	3.4e-08	28.57	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9C7J9	5.8e-08	27.01	F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1	[more]
Q9FLU7	9.9e-08	30.30	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
Q949S5	4.2e-06	30.77	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]

BLAST of HG10013034 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9G5	5.3e-12	39.16	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 ...	[more]
A0A0A0L445	1.0e-10	38.19	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 ...	[more]
A0A6J1H715	1.0e-10	38.03	F-box protein PP2-B11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1H8G3	1.0e-10	38.03	F-box protein PP2-B11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1EFS1	1.7e-10	38.30	putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=...	[more]

BLAST of HG10013034 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02240.1	1.1e-09	29.50	F-box family protein	[more]
AT2G02360.1	2.4e-09	28.57	phloem protein 2-B10	[more]
AT1G56240.1	4.1e-09	27.01	phloem protein 2-B13	[more]
AT5G24560.1	7.1e-09	30.30	phloem protein 2-B12	[more]
AT1G80110.1	3.0e-07	30.77	phloem protein 2-B11	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 22..150 e-value: 3.9E-15 score: 56.2
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 19..152
None	No IPR available	PANTHER	PTHR32278:SF81	SUBFAMILY NOT NAMED	coord: 19..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013034.1	HG10013034.1	mRNA