HG10013027 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013027
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent DNA helicase 2 subunit KU80
Location	Chr01: 26249241 .. 26256603 (-)
RNA-Seq Expression	HG10013027
Synteny	HG10013027

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATATTTCTCACATTCAAGGATTTATGTTATGTGGAATAGGAAATTTTGGTGCTGGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCCGAGGTCGAAAAAGTGTGTTCAATGCTAGTAGAGAAGAAGGTATTCCGTTGACAGTTTTCTATAGATATTTTGTAGTTTATAACTTATTTAGAGTTTTTCCTTCTATCTAGGACTAATGAGTTTGTTATCAACCAAAGAAATTTTCATGTATCAGAAAGTCGGAATATATTCTCTGGAACTATTTTAATTAATATTACCTTCTTTTGATGCAGCTAATCTACAACAAATATGATGAAGTAGGAATTGTTCTATTTGGAACTGAAGGTCTCTCTCTCTCTCTCTCACAATTTTAATTTGTATTCTCTTAAATGTTCATTAGCAGATGCGTTTGAAAACTTGTTTGTATTTTCAAAATTTTATTGTATGGATTACTATACCTATGTAATGAAATTTGCAGACACTAAAAATGAGCTGACGGAGGAAGTTGGCGGATATCAGCATGTGGTAGTTTTACAGAACATGAAAGTGGTTGATGGAGATCTTGTTGATGTTCTAAAACGGATCCCTCGAGGGACTGTTTCCGGTGATTGTATCCATTATCCAGCATTCTAATAGAGTTCTTTGTTTGTTTGTTTTGATGGAGGATCATGCTTTGCTTTCTATACCTATATCATTTTATAATTGATTACATACTGCTTGAAACTGTGATCTTTTTGTTTATATTCCTTTCCAGTTCCCATATTACTTTGCACTTCTATTTTTTTAAAAAAATTATTTAAATAACAGTGGTATCAGAATAGATCCCTGGCTAATATGGTCTACTCCGCTATTCTTAGAGAGGCTGTTTCGTCCACCCTAAGACTAGCTCCAAGAAAAAAATTATTTAAATAACAGTGGTGTCAGAATTGTCTAATGCTCATATCTTTGGGTACCTTGACATTGTCGGTAGTTCTTGACGCCATAATTGTAGGAATGGATATGTTGATAAAGAAATTTGGAGAGACAGAGAAGGGGAAGAAACGCTTATGTCTTGTTACAGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGAACCAAAGAGGATCAAGTTACGACCATTGCACAACAGATGACAAAACATGGCATGAGAATGGATAGTGTTGTCGTGAGAGGGAGGTTCGGTCAGGATGCGAATGAGAAAATAATGGATGAAAATGACATTCTTTTAAACATATTTTCAGAGAAAACAAATGCAAAAATGGTGTATGTGGAGAGTCCAACTTCATTATTAGGTGCAATCCGGACTCGAAGTATAGCGCCTGTGACAATTTTCAGAGGCAATCTTGAGATAAGCACCCTTATCAAGATTAAGGTGAAGTGTCAGGTCTTTGATACGACTTATGCCCAGCATTTTCAGCTACTCTTATCATAAAAATTCTGGCATAGCGTTCAAATTTTTTGATAGAAAATTAAGGGTAGCTTCTATTTCTTTTACACATGATTGATAATCATCATTTATCAATGTTGATACTCTAATTTAATCAGGTATGGGTTTACAAGAAAACATCAGAAGAGAAGTTTCCTACTCTGAAAAGATATTCTGATAAAGCACCTCCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTATGAGTACAAAAGCGTCGAAGAACCAAGTAAGGTAGTGCCTCCTGAACATAGGATTAAAGGTTATCGGTATGGACCTCAAGTGGTTCCGATATCAACTGCTGAATGGGATGCAGTGAAGTTCAAACCAGAAAAGAGCGTGAAGCTACTCGGATTTACAAATGCGTCAAATATAATGAGGTAGATTCTAGCTGTTTTGAATTTTTCTTTACCCTATCATGTAAAAGAAACCTTTTGTTCTCATAGTTTGTGTTTTGAACTCTTTTGGTTTGCTTAATTATTTTGAAGGCACTACTACATGAAAGATGTCAATGTCTTCATCGCCGAACCGAGCAATAAAAGAGCCACTGTTGCGGTTTCTGCTCTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCAATAGTGCGATGCGTTTGGAGACAAGGGCAGGGGACTGTTGTTGTAGGTGTCTTGACACCCAATATATCCAAGAAGGACGGTATTGTATGTCTACTAAATACATTTTTGTATTCCCCTATTGAGTAGTCTTTCTGTTTTATATATTTTACCTTCCCATTAATTTGCTTCATTGATGTCGTTTTTATGGTAGGCCGATTCGCTATACTTCAATGTACTTCCCTTCGCAGAGGATGTTCGGGAATTTCAATTTCCATCTTTCAGCAATTTGCCAGCATTGATGCAGCCAAGTGATGAACAGCAACAGGCAGCAGATGAATTGGTTAAGATGCTCGATCTCGCACCAGCTAGACGAGAGGAAATTCTACCGCCAGATTTCACACCAAATCCTGTTCTGGAGGTAGGTATGCCTTTATGTTTTCTGTTTTTTCAAATCATTTAGACACTCTGAAATCACCATTTTCCCCAATTCAGATTACAAGGCTTCTTCTGTTAGTTAATGGGATTTGTTGCTTGCTTTGCCCTTGAATTGTGTGTACTCATCCGTCTTGTGTTGGCAGCGCTTCTATCGTCATCTCGAGTTGAAATCAAAGGATCCAGATGCTGCTGTACCTCCACTTGATGGAACTCTCCAAAAGATTACCGAGCTAGATCCGGACTTGTTTTCTCAAAACAAATCTGTTATTGACACATTCCACAAAAGATTTGAACTCAAGGAGAACCCGAAGGTAGTTCATCAATGACTTGTATTCAATCAATACAATTGTGTTATCCTACAAGCCTTATCTTACATAGAAGTTTTGGATATGATCTAAAACACAGCTAAAGAAACCGAGAAGGCATTATTTACGTGAAAAAGCATCCGGTTCAAGCGATAAAGAGGACAATGAAGAGATTTCTGCTCAAATTGTTGACGCTGTTGCTAATATGCCTATAGTTAAGGTTGAAAAGATTGGAGATTCAACTCCACTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAGTAAAGCAATCAGTGGCATGATAAACAAAATATTCGATCTTCTCGAGAACTCCTCTAGTTGTGATAACTATCTGAAAGCTATCGAGTATTTGCTTGCGCTTCGCAAGGGTTGCATTATCGAACAAGTATGTTACTCGCAATCTGTCCCTTATGTTCATGCTCAAGAATAAAACTGCTCATGTTTTGTACAGGAACCGAAGCAATTCAACGATTTCCTCGGTCATCTCTGTAAATTTTGCCCCGAAAGAAACCTCCATAGCTTCTTTGAATTCCTTGCATCCCAACAAATTAGTTTGATCTCCAAGGAAGAAGCCGCTGACAGGTATCATATTCATTTTCTTGTTGAAACTGTCCTGAAACTCTTATTTACATTGTTCTTCTTATGAAGTTCTTTGTTTGCTTTTGTATATTTCTATTGTGAGCAGTGAAGTAGCAGATGATGAAGCTAGAAGCTTTTGGGTTAAAATGGAGCCTAAATTAGAGCAAGTTTAGATAGTGCAGCATGTATATATGTAATTTTGTGTATCCATCAAATGTTGAAGCTATTAAAAGAAAGGATTAAAGGAGGAAGGGATTGGTTTGAATTATATTTTGATCTAGCTTCCATACTTTTAAATGTTACTTTTTACTATTTTAGCTGTATTGTCCTCTACATTTGAATTCATTTCCAAATACGTTTTGGCATGGGAGATTGAACCTCCAACTTCTAGAGGGAAAAGTCATGCCAATTATTGTTAAATTAAGCTCACTTTGGCCATCTCCAAATTCATTATTTTTTAAAATATAGGTCGATGTAGTGTTACTTATTATTATTATTTTAATTTCTAGTTGTTAAATGATTCATTTTCTTATAACAAAAGGAAGAAGTTAATGTAATAAAAATGAGGGATGTATATATAAATCAAGCATTGGAGTATCTGTTGATATGTCAATATATTTGTAAATTGGAAAGTTCAACATTGATACTAAAGATAAAGCAACATCTGATATTTTCTTTTGAATAAATATACATCAAACGTTAAAAAAAAAAAAAAACTTAATTCGGATATGAATATGAATACTAATAATAAAGTATTTATTGAAATAAAAATGTGAAATTATGTTTTATTGAAATTTATTTCATAGAATTTTAGAAATGTCATCACTCTATTTGGTGTTTAGATTACATTAACGGATAACAAGAGAAAAATGAGTGAAACTATTTATAAATATAGAAATTTTTTACTGTCTATCACCAATAGACTGCCAACGATAAAAGTCTATCTCGATCGCTACTTTTTCTATATTTATAAATAGTTTAATATTTTTTTTATTTAATTTTCCTATCTATAAATTTGGGTAAGATGAAATTGAAAGGATATTATTGGACAGATACATGAGTAGAAAAGAAATAATTGGATAACGTCTTTCTTCTCACGCTGCTCTCTCTCTTCCTGCCCAAAATCGTTACCATCGAGGCTGGAGCTTCCGTATATAAATACAGCACACGCCAAATTCAGTGCAGAGTCTTTAATTATTAACCGCTTTTGTTCAAGCAGCGTCTCATTCAGTTTCTTCTTCTCGTTGACGGTCATGGACTTTCAAGCTCACGCTCTGGTATCTTCTCTCTCTCTCTCTCTCTCTTGAGCGTGCGCGGTTTCTTGAAATCGTTTGATCTGAAGATAAAATGATTGAAGAGAGACGGATTCACTTTCTTAACTCGAAATCTTTAGGAAATGTAGTATAATGTTGATCTTACTTTTGTTTGTCATTACAGAAAAGCTCCGACGATTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGTTTTTCTTCTTCTTTGACTTTACTGGAAAATTCATCTTCGATTTTGCAGTACAGAAGAATTCGAGTCTGATTTGTTGTAAAATACATGGTTATCTTGTTTAAATCGAGTCTAAGCGGATATGAAGAGTTGTTATTATAAATCGGACGAATGAAGTATAGAAGAATTTGCGTTTGATCTGCCGTAAAACCGAAACGCATGTTGACATTGTTTAAATTGATTCTAAGCTGAAATTAAGGTCGTGATAGTAAATCAAACAAATGAAAGTTGTGGAACTTGATTAACAGAATGTTTTCCGACTGTTGCTTAGGGCTTTCTTACGAGTGTAGAGCAGTAAACCTTGGGAGAGGAGAGCAATTAAGTCCAGGTAAATCTCACGATTGATGTGTTAGTGCGGATCGATAGAATATAAATCTGCTGAACGATTTTTTTTTTTTTTAAATTCCGAGATGCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGGTTAGTATAAAGAGAAGGGAGATGACTTTGTTCGAGTCCATGACAAAGAACAGTGAACTTCTGAACTGGCCGCAATGGCTAAGCAAATGCCAGTTCAGAAGATTTTGGATTCTCACGGACTTGAATATACTAGTCATCCTTCTTTTCTCATGGCTAGTTTTGATCCTCTGTTGCTCTTACAATCCTAGATTATGCTTGTAACACTATTGCACTTTTCTTGTTGTTGTTGTTTAGTATCTGGAAGAGAAATATCCACAGAAAGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGTAAGATCAGTACTGGTTAACTACAAATTGAAACGTTTAAAAGAGAGCTCTCTAGATCTATGAAAAATATCTTCTAGCATTTAACTACTTGTTCTTACGGTACTCCTACAGGCCTACAGTTGTATTTTTTTGTTTTCAAGTCCACTGACTGAATTTTAAAATCTTTAGGATACATTTAATTTTTCATCATATATATGATTTGAGATCTTAATTTTCTGTGTTTTGAGTCCTTATGAGAAAACTTGGTTTAAACGGCAGTGGATTAGCTTGCATCAATTTAATGATTACTTTTAGTTTCTAACGTGTTAGCACAATAGCACTATTAACTCTTGTGAAAATTGAGCAATAAATCTGCGATTTCTGATTCTCAGAAAAGCAAAAAAGAAAATATCTATAATTCTGTGCAAACGAAAATTCACATTTAATTTGGTTAAGTTATTTGTGTATCATTATGTTGGTAGGTTCTTATCACAAATGATGAATGTTGATAGGGAAATTCATGTTGCAGGTGGGAAGTATCGTCAGCTCAAGCATACAACCTGTCATTATGATGGGATTGCTGGTAGATTTTATTTGCACTAGCTGTGTACATACATATCTAAAGTTAATCTAGTCCCCGTTTATATATATATATATATTTGTTTAGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTGCCATGGGCTCAGTCCCATTTAGAAAAAGGTTTCAATGGTACGTTTGTGAAGTTTTTCGGTGTTCAATTGTGCGTAGGAAAAATAAAACTAGTGCACTAAATCATTGTGTGGGCAAGCAAGTGTAACGGGGCCTCAATTTTCCATCTGTTTGTGTTTACAGCTCTTGAGAAACTTCTGAAGGATTTTTCTGGCCAATATGCCTTGGGAGATAAACTATATATGGCACGTTTCAAAATATTCTCGATTCTTTTGCTATTTAAGATTTCAATTTTTGAAGTTTCATCATCATGGTCTTAATCTTGTTTTGTCACATGCAGGCTGATGTATTTTTGGCCCCCCAAATTTCAAATGCTACTGAGAACTTCGACATTGACATGGTATTTTATTTTCTCCATTCTTATTTATATCTCACGTCGCAATTATCACACGTTACGAAAAATGAAAAACATTACCCTGTCTTCCTAAAAAAAAAAAAAATCAAGAAACAACACCACCGAACACTTTATCAATAGGCATTAGCATAGCTAATTTCATCGCTCATAAGAGGTTGATAGTTTGAAGTTCTAATGTAAATCTCCCTGGTTGCACTTGCATAGATCGTAGGCTTACAAAACTGCCCATCTCTTGATTTTTTTTTTATAAAAAAAAGTAACTCTTTGATTATATTTAAAAAAATAATAATTGAAAGCTAATCTCTAGATATTCTTGGTTATAACATATAAGAAATTTGGAAAAAACATAGTCTCGAAACTCTCTCATATAACAAATTTCTGCTGTTGGATAATGCAGTCTAAGTTTCATACCTTAGCAAGGATTTATGAATCTTACAAGAAGTTACCAGAATTCCAAGCCTCGTCACCAGAAAGGCAGTCTGACGCCCTTCATTAG

mRNA sequence

ATGCATATTTCTCACATTCAAGGATTTATGTTATGTGGAATAGGAAATTTTGGTGCTGGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCCGAGGTCGAAAAAGTGTGTTCAATGCTAGTAGAGAAGAAGACACTAAAAATGAGCTGACGGAGGAAGTTGGCGGATATCAGCATGTGGTAGTTTTACAGAACATGAAAGTGGTTGATGGAGATCTTGTTGATGTTCTAAAACGGATCCCTCGAGGGACTGTTTCCGGTGATTTTCTTGACGCCATAATTGTAGGAATGGATATGTTGATAAAGAAATTTGGAGAGACAGAGAAGGGGAAGAAACGCTTATGTCTTGTTACAGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGAACCAAAGAGGATCAAGTTACGACCATTGCACAACAGATGACAAAACATGGCATGAGAATGGATAGTGTTGTCGTGAGAGGGAGGTTCGGTCAGGATGCGAATGAGAAAATAATGGATGAAAATGACATTCTTTTAAACATATTTTCAGAGAAAACAAATGCAAAAATGGTGTATGTGGAGAGTCCAACTTCATTATTAGGTGCAATCCGGACTCGAAGTATAGCGCCTGTGACAATTTTCAGAGGCAATCTTGAGATAAGCACCCTTATCAAGATTAAGGTATGGGTTTACAAGAAAACATCAGAAGAGAAGTTTCCTACTCTGAAAAGATATTCTGATAAAGCACCTCCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTATGAGTACAAAAGCGTCGAAGAACCAAGTAAGGTAGTGCCTCCTGAACATAGGATTAAAGGTTATCGGTATGGACCTCAAGTGGTTCCGATATCAACTGCTGAATGGGATGCAGTGAAGTTCAAACCAGAAAAGAGCGTGAAGCTACTCGGATTTACAAATGCGTCAAATATAATGAGGCACTACTACATGAAAGATGTCAATGTCTTCATCGCCGAACCGAGCAATAAAAGAGCCACTGTTGCGGTTTCTGCTCTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCAATAGTGCGATGCGTTTGGAGACAAGGGCAGGGGACTGTTGTTGTAGGTGTCTTGACACCCAATATATCCAAGAAGGACGGTATTGCCGATTCGCTATACTTCAATGTACTTCCCTTCGCAGAGGATGTTCGGGAATTTCAATTTCCATCTTTCAGCAATTTGCCAGCATTGATGCAGCCAAGTGATGAACAGCAACAGGCAGCAGATGAATTGGTTAAGATGCTCGATCTCGCACCAGCTAGACGAGAGGAAATTCTACCGCCAGATTTCACACCAAATCCTGTTCTGGAGCGCTTCTATCGTCATCTCGAGTTGAAATCAAAGGATCCAGATGCTGCTGTACCTCCACTTGATGGAACTCTCCAAAAGATTACCGAGCTAGATCCGGACTTGTTTTCTCAAAACAAATCTGTTATTGACACATTCCACAAAAGATTTGAACTCAAGGAGAACCCGAAGCTAAAGAAACCGAGAAGGCATTATTTACGTGAAAAAGCATCCGGTTCAAGCGATAAAGAGGACAATGAAGAGATTTCTGCTCAAATTGTTGACGCTGTTGCTAATATGCCTATAGTTAAGGTTGAAAAGATTGGAGATTCAACTCCACTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAGTAAAGCAATCAGTGGCATGATAAACAAAATATTCGATCTTCTCGAGAACTCCTCTAGTTGTGATAACTATCTGAAAGCTATCGAGTATTTGCTTGCGCTTCGCAAGGGTTGCATTATCGAACAAGAACCGAAGCAATTCAACGATTTCCTCGGTCATCTCTGTAAATTTTGCCCCGAAAGAAACCTCCATAGCTTCTTTGAATTCCTTGCATCCCAACAAATTAGTTTGATCTCCAAGGAAGAAGCCGCTGACAGCGTCTCATTCAGTTTCTTCTTCTCGTTGACGGTCATGGACTTTCAAGCTCACGCTCTGAAAAGCTCCGACGATTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTGTAGAGCAGTAAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATCTGGAAGAGAAATATCCACAGAAAGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGCTGATGTATTTTTGGCCCCCCAAATTTCAAATGCTACTGAGAACTTCGACATTGACATGTCTAAGTTTCATACCTTAGCAAGGATTTATGAATCTTACAAGAAGTTACCAGAATTCCAAGCCTCGTCACCAGAAAGGCAGTCTGACGCCCTTCATTAG

Coding sequence (CDS)

ATGCATATTTCTCACATTCAAGGATTTATGTTATGTGGAATAGGAAATTTTGGTGCTGGTGCTGGATGTTGGTCCATCAATGCACTCTATTCTCCCCGAGGTCGAAAAAGTGTGTTCAATGCTAGTAGAGAAGAAGACACTAAAAATGAGCTGACGGAGGAAGTTGGCGGATATCAGCATGTGGTAGTTTTACAGAACATGAAAGTGGTTGATGGAGATCTTGTTGATGTTCTAAAACGGATCCCTCGAGGGACTGTTTCCGGTGATTTTCTTGACGCCATAATTGTAGGAATGGATATGTTGATAAAGAAATTTGGAGAGACAGAGAAGGGGAAGAAACGCTTATGTCTTGTTACAGATGCTCTATTCCCTATAAAAGAACCTTATGAAGGAACCAAAGAGGATCAAGTTACGACCATTGCACAACAGATGACAAAACATGGCATGAGAATGGATAGTGTTGTCGTGAGAGGGAGGTTCGGTCAGGATGCGAATGAGAAAATAATGGATGAAAATGACATTCTTTTAAACATATTTTCAGAGAAAACAAATGCAAAAATGGTGTATGTGGAGAGTCCAACTTCATTATTAGGTGCAATCCGGACTCGAAGTATAGCGCCTGTGACAATTTTCAGAGGCAATCTTGAGATAAGCACCCTTATCAAGATTAAGGTATGGGTTTACAAGAAAACATCAGAAGAGAAGTTTCCTACTCTGAAAAGATATTCTGATAAAGCACCTCCAACTGATAAATTTGCCACACATGAAGTCAAGGTAGATTATGAGTACAAAAGCGTCGAAGAACCAAGTAAGGTAGTGCCTCCTGAACATAGGATTAAAGGTTATCGGTATGGACCTCAAGTGGTTCCGATATCAACTGCTGAATGGGATGCAGTGAAGTTCAAACCAGAAAAGAGCGTGAAGCTACTCGGATTTACAAATGCGTCAAATATAATGAGGCACTACTACATGAAAGATGTCAATGTCTTCATCGCCGAACCGAGCAATAAAAGAGCCACTGTTGCGGTTTCTGCTCTAGCAAGAGCAATGAAGGAAATGGACAAAGTGGCAATAGTGCGATGCGTTTGGAGACAAGGGCAGGGGACTGTTGTTGTAGGTGTCTTGACACCCAATATATCCAAGAAGGACGGTATTGCCGATTCGCTATACTTCAATGTACTTCCCTTCGCAGAGGATGTTCGGGAATTTCAATTTCCATCTTTCAGCAATTTGCCAGCATTGATGCAGCCAAGTGATGAACAGCAACAGGCAGCAGATGAATTGGTTAAGATGCTCGATCTCGCACCAGCTAGACGAGAGGAAATTCTACCGCCAGATTTCACACCAAATCCTGTTCTGGAGCGCTTCTATCGTCATCTCGAGTTGAAATCAAAGGATCCAGATGCTGCTGTACCTCCACTTGATGGAACTCTCCAAAAGATTACCGAGCTAGATCCGGACTTGTTTTCTCAAAACAAATCTGTTATTGACACATTCCACAAAAGATTTGAACTCAAGGAGAACCCGAAGCTAAAGAAACCGAGAAGGCATTATTTACGTGAAAAAGCATCCGGTTCAAGCGATAAAGAGGACAATGAAGAGATTTCTGCTCAAATTGTTGACGCTGTTGCTAATATGCCTATAGTTAAGGTTGAAAAGATTGGAGATTCAACTCCACTCCAAGATTTTGAAGCTATGATGTCTAGAAGAGATAGTCCAGAGTGGATCAGTAAAGCAATCAGTGGCATGATAAACAAAATATTCGATCTTCTCGAGAACTCCTCTAGTTGTGATAACTATCTGAAAGCTATCGAGTATTTGCTTGCGCTTCGCAAGGGTTGCATTATCGAACAAGAACCGAAGCAATTCAACGATTTCCTCGGTCATCTCTGTAAATTTTGCCCCGAAAGAAACCTCCATAGCTTCTTTGAATTCCTTGCATCCCAACAAATTAGTTTGATCTCCAAGGAAGAAGCCGCTGACAGCGTCTCATTCAGTTTCTTCTTCTCGTTGACGGTCATGGACTTTCAAGCTCACGCTCTGAAAAGCTCCGACGATTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTGTAGAGCAGTAAACCTTGGGAGAGGAGAGCAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTCAAGTATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATCTGGAAGAGAAATATCCACAGAAAGCGCTGCTGCCTGCTGATCTTCATTTAAAATCTCTTAATCTGCAAGCTGATGTATTTTTGGCCCCCCAAATTTCAAATGCTACTGAGAACTTCGACATTGACATGTCTAAGTTTCATACCTTAGCAAGGATTTATGAATCTTACAAGAAGTTACCAGAATTCCAAGCCTCGTCACCAGAAAGGCAGTCTGACGCCCTTCATTAG

Protein sequence

MHISHIQGFMLCGIGNFGAGAGCWSINALYSPRGRKSVFNASREEDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKKFGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDANEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIKVWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRYGPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVSALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQFPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKSKDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKASGSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMINKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFEFLASQQISLISKEEAADSVSFSFFFSLTVMDFQAHALKSSDDSSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQADVFLAPQISNATENFDIDMSKFHTLARIYESYKKLPEFQASSPERQSDALH

Homology

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BLAST of HG10013027 vs. NCBI nr
Match: XP_038898554.1 (ATP-dependent DNA helicase 2 subunit KU80 [Benincasa hispida])

HSP 1 Score: 1132.1 bits (2927), Expect = 0.0e+00
Identity = 577/618 (93.37%), Postives = 595/618 (96.28%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FG TEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA
Sbjct: 113 FGVTEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           +EK+M+END LLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 173 DEKMMNENDNLLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSIIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNV I EP NKRA +AVS
Sbjct: 293 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVLIPEPGNKRAIIAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPALMQPS EQQ+AAD+ VKMLDLAPA REEIL PD TPNPVLERFYRHLELKS
Sbjct: 413 FPSFSNLPALMQPSVEQQEAADDFVKMLDLAPAGREEILQPDLTPNPVLERFYRHLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNKSVIDTFH+RFELKENPKLKKPRRHYLREKAS
Sbjct: 473 KDPDAAVPPLDGTLQKITEPDPDLFSQNKSVIDTFHRRFELKENPKLKKPRRHYLREKAS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDN+EISAQIV++V+NMPIVKVEKIGDSTPL+DFEAMMSRRDSPEWISKAI GM 
Sbjct: 533 GSSDKEDNDEISAQIVESVSNMPIVKVEKIGDSTPLEDFEAMMSRRDSPEWISKAIIGMR 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           NKIFDL+ENSS  DNY KAIEYL ALRKGCIIEQEPKQFNDFL HL KFC E+ LHSF E
Sbjct: 593 NKIFDLVENSSDGDNYPKAIEYLRALRKGCIIEQEPKQFNDFLRHLRKFCLEKKLHSFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 653 FLASQQISLISKEEAADS 670

[Close]

BLAST of HG10013027 vs. NCBI nr
Match: XP_016898908.1 (PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 isoform X2 [Cucumis melo])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 36  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 95

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 96  FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 155

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 156 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 215

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 216 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 275

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 276 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 335

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 336 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 395

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 396 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 455

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 456 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 515

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 516 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 575

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 576 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 635

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 636 FLASQQISLISKEEAADS 653

[Close]

BLAST of HG10013027 vs. NCBI nr
Match: XP_008438156.1 (PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 isoform X1 [Cucumis melo])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 113 FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 173 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 293 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 413 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 473 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 533 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 593 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 653 FLASQQISLISKEEAADS 670

[Close]

BLAST of HG10013027 vs. NCBI nr
Match: KAA0049037.1 (ATP-dependent DNA helicase 2 subunit KU80 isoform X2 [Cucumis melo var. makuwa] >TYK17527.1 ATP-dependent DNA helicase 2 subunit KU80 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 23  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 82

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 83  FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 142

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 143 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 202

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 203 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 262

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 263 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 322

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 323 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 382

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 383 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 442

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 443 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 502

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 503 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 562

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 563 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 622

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 623 FLASQQISLISKEEAADS 640

[Close]

BLAST of HG10013027 vs. NCBI nr
Match: XP_022147110.1 (ATP-dependent DNA helicase 2 subunit KU80 [Momordica charantia])

HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 558/618 (90.29%), Postives = 587/618 (94.98%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK++PRGTVSGDFLDAIIVGMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQLPRGTVSGDFLDAIIVGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETEKGKKRLCL+TDALFPIK+PYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFG DA
Sbjct: 113 FGETEKGKKRLCLITDALFPIKDPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGHDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           +EKIMDEND+LLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG LEIS++IKIK
Sbjct: 173 DEKIMDENDVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGVLEISSIIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKS E+PSKVVPPEHRIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSAEDPSKVVPPEHRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNI+RHYYMKDVNVFIAEPSNKRA VAVS
Sbjct: 293 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNILRHYYMKDVNVFIAEPSNKRAIVAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSLYFNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLYFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           F SFSN PA MQPS+EQQ+AAD+LVKMLDLAP+ REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 413 FSSFSNFPASMQPSEEQQEAADDLVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLD TLQKITE DPDLFSQ KS+IDTFH+RFELKENPKLKK RR +LREK S
Sbjct: 473 KDPDAAVPPLDVTLQKITEPDPDLFSQIKSIIDTFHRRFELKENPKLKKSRRRFLREKPS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSS+KEDNE+I AQIVD+ AN   VKVEKIGDSTPLQDFEAMMSRRDSPEWISKAI+GM 
Sbjct: 533 GSSEKEDNEDIPAQIVDSAANPSAVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAINGMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           NKIFDL+ENS   DNY KA+EYLLALRKGCIIEQEPKQFNDFL HLCKFC + NLHSF E
Sbjct: 593 NKIFDLVENSCDGDNYPKALEYLLALRKGCIIEQEPKQFNDFLHHLCKFCLKNNLHSFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLAS+Q++LISK EA DS
Sbjct: 653 FLASKQLTLISKVEAVDS 670

[Close]

BLAST of HG10013027 vs. ExPASy Swiss-Prot
Match: Q9FQ09 (ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana OX=3702 GN=KU80 PE=1 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 1.1e-214
Identity = 371/618 (60.03%), Postives = 478/618 (77.35%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           E+T NEL  E+GGY++V VL+N++VVD    + +K++PRGTV+GDFLDA+IVGMDMLIK 
Sbjct: 53  EETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKM 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           +G   KGKKR+CL+T+A  P K+P+EGTK+DQV+TIA +M   G++M+S+V+R     DA
Sbjct: 113 YGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           +E++++END LL +FS    AK V V+SP SLLG+++TR +APVT+FRG+LEI+  +KIK
Sbjct: 173 HERVIEENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKK +EE+ PTLK YSDKAPPTDKFA HEVKVDY+YK   E ++V+ PE RIKG+RY
Sbjct: 233 VWVYKKVAEERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQV+PIS  + + +KFK +K +KLLGFT ASNI+RHYYMKDVN+ + +PS +++ +AVS
Sbjct: 293 GPQVIPISPDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           A+AR MKE +KVAIVRCVWR GQG VVVGVLTPN+S++D   DS YFNVLPFAEDVREF 
Sbjct: 353 AIAREMKETNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFP 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSF+ LP+  +P ++QQ  AD LVKMLDLAP+  EE+L PD TPNPVL+RFY +LELKS
Sbjct: 413 FPSFNKLPSSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           K  DA +PP+DGT +++ E DP+L S NKS++DTF   FE+KENPKLKK  +  LR+K S
Sbjct: 473 KSTDATLPPMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GS D EDN  I+    DA  N    K++ +GD+ P+QDFEAM+SRRD  +W  KAI+ M 
Sbjct: 533 GSDD-EDNRMIT---YDAKEN----KIDIVGDANPIQDFEAMISRRDKTDWTEKAITQMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           N I  L+EN +  D   KA+E +LALRKGC++EQEPKQFN+FL HL K C ERNL    E
Sbjct: 593 NLIMKLVENCT--DEGDKALECVLALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLE 652

Query: 645 FLASQQISLISKEEAADS 663
              S++I+LI K EAADS
Sbjct: 653 HFMSKKITLIPKSEAADS 660

[Close]

BLAST of HG10013027 vs. ExPASy Swiss-Prot
Match: Q75IP6 (ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza sativa subsp. japonica OX=39947 GN=KU80 PE=1 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 6.2e-205
Identity = 379/639 (59.31%), Postives = 472/639 (73.87%), Query Frame = 0


Query: 35  RKSVFNASRE--------EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTV 94
           +K V+N S E        ++T NEL +E+GGY+HVVV +++KVVD +  + L+ +PRGT 
Sbjct: 35  KKLVYNRSDEIGVVLFGTKETSNELAKELGGYKHVVVARDIKVVDEETTNALQNLPRGTS 94

Query: 95  SGDFLDAIIVGMDMLIKKFGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTK 154
            GDFLDAI+VG+DMLI+KFG   KGK+R+CLVTDA  P+++P +GTK+DQV TIA QM +
Sbjct: 95  PGDFLDAIVVGLDMLIRKFGNI-KGKQRMCLVTDAQHPLRDPPQGTKKDQVDTIADQMKR 154

Query: 155 HGMRMDSVVVRGRFGQDANEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIA 214
           H ++MD ++ R       +  +MDEND LL  F E++  K+V+V+SPTSLLGA+RTR++ 
Sbjct: 155 HEIKMDCIIFRE--SGVRHNAVMDENDQLLYHFRERSVTKVVHVDSPTSLLGALRTRNVL 214

Query: 215 PVTIFRGNLEISTLIKIKVWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSV 274
           PVT+FRG+LE+S+  KIKVWVYKKTSEEKFPTLK+YSDKAP +DKFA+HEVKVDYEYKSV
Sbjct: 215 PVTVFRGDLEVSSSFKIKVWVYKKTSEEKFPTLKKYSDKAPASDKFASHEVKVDYEYKSV 274

Query: 275 EEPSKVVPPEHRIKGYRYGPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKD 334
            EP  VVPP+ RIKGY YGPQVVPIS+AEW+AVKFKPEK VKLLGFT+ S+I RHY+MKD
Sbjct: 275 LEPDTVVPPDQRIKGYLYGPQVVPISSAEWEAVKFKPEKGVKLLGFTDRSSISRHYFMKD 334

Query: 335 VNVFIAEPSNKRATVAVSALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIA 394
           V  F+ EP N +A  AVSALARAM EM+KVAI+RCVWRQGQG V +GVLTPNIS    + 
Sbjct: 335 VFSFVPEPGNTKAVAAVSALARAMSEMNKVAILRCVWRQGQGNVALGVLTPNISSAKNVL 394

Query: 395 DSLYFNVLPFAEDVREFQFPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPD 454
           DS YFN+LPFAED+REFQF SFS+LP+  QP+ EQQ+AAD LVKMLDLAP  REEIL PD
Sbjct: 395 DSFYFNILPFAEDIREFQFRSFSSLPSSSQPTKEQQEAADNLVKMLDLAPPGREEILKPD 454

Query: 455 FTPNPVLERFYRHLELKSKDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELK 514
           FTPNP+LERFYR+L+LKSK PDA VPPLD  L+KITE DPD+      +I      FELK
Sbjct: 455 FTPNPMLERFYRYLDLKSKQPDANVPPLDKCLKKITEPDPDVIDYQAPLIKKLGNVFELK 514

Query: 515 ENPKLKKPRRHYLREKASGSSDKEDNEEISAQIVDAVANM--PIVKVEKIGDSTPLQDFE 574
           ENPK KK R              +  EE SA+ V     +  P  K  +IGD  P+QDFE
Sbjct: 515 ENPKKKKARTQDRLTYTGADDQAKLLEEPSAEKVGVSEALYPPKKKAGEIGDHNPVQDFE 574

Query: 575 AMMSRRDSPEWISKAISGMINKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFN 634
           AM+++R S  W+  AI  M   I  L+++S   DN+ KA+E L+ALRK CIIEQEP ++N
Sbjct: 575 AMLTQRSSSTWVQTAIEEMQKYITALIQDSCDRDNHQKALECLVALRKACIIEQEPNEYN 634

Query: 635 DFLGHLC-KFCPERNLHSFFEFLASQQISLISKEEAADS 663
            F+  LC KF P  +   F + L+S++ SLISKEEA DS
Sbjct: 635 GFVTKLCQKFRPAGD-KIFLQLLSSKKASLISKEEAPDS 669

[Close]

BLAST of HG10013027 vs. ExPASy Swiss-Prot
Match: Q54LY5 (X-ray repair cross-complementing protein 5 OS=Dictyostelium discoideum OX=44689 GN=ku80 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.1e-65
Identity = 188/684 (27.49%), Postives = 330/684 (48.25%), Query Frame = 0


Query: 47  TKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKKFG 106
           TKN L ++  GYQH+ V+ +++    + +  L+ +  G   GD +D++IV MDMLI+K  
Sbjct: 69  TKNNLQDD--GYQHITVVSDIEEPSIETLKYLENLAPGESKGDVIDSLIVAMDMLIRK-T 128

Query: 107 ETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRF---GQD 166
           E +K +KR+ LVT+A  PI         DQ   I  ++   G+     +          +
Sbjct: 129 ENKKYQKRIFLVTNARDPINTEDLSIVRDQFKKIDVKLNIIGVDFLEEIEENNMDTSNNN 188

Query: 167 ANEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKI 226
            N+ + ++N+I L  F+E  +  +V V+    ++   R++S+   T FRG LEI+  +KI
Sbjct: 189 KNKSLKEKNEIFLREFAESVDGVLVPVKQALEMMSFFRSQSVMTRTSFRGALEITPELKI 248

Query: 227 KVWVYKKTSEEKFPTLKRYSDKAPPT--------------------------DKFATHEV 286
            VW Y K  ++  P+LK+ S  A                                 T +V
Sbjct: 249 PVWGYLKMKQQLLPSLKKISSIAQQQIEQQQQQQQQQNKNKNNEDNEDNEEGKPNITLDV 308

Query: 287 KVDYEYKSVEEPSKVVPPEHRIKGYRYGPQVVPISTAEWDAVKFKPEKSVKLLGFTNASN 346
             +  Y S+ +P   +     +KGY+YG  ++P S  + D +K+   K +K++GFT+  +
Sbjct: 309 NQEVSYYSITDPDNEILKPDLLKGYKYGKSLIPFSKIDEDQLKYSSSKCLKVVGFTDRKS 368

Query: 347 IMRHYYMKDVNVFIAEPSNKRATVAVSALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTP 406
           I  +Y M +  VF+++P +K++  A+S+   A+ E D+V +VR V +   G+  +G + P
Sbjct: 369 IPIYYNMGNTEVFVSQPGDKQSEEALSSFIHALVETDQVMVVRYV-KTMNGSPYLGYMIP 428

Query: 407 NISKKDGIADSLYFNVLPFAEDVREFQFPSFSNLPALMQ----PSDEQQQAADELVKMLD 466
           ++ K D +   LY+N LP A+D+R++QFP  S    L +    P+ EQ +A  +L+  +D
Sbjct: 429 HV-KSDYVC--LYYNHLPLADDIRQYQFPPISPKNPLTRKSNIPNAEQLEATQQLIDSMD 488

Query: 467 LAPARREE------ILPPDFTPNPVLERFYRHLELKSKDPDAAVPPLDGTLQKITELDPD 526
           L  +  +E      +L P FT NP+L+ FY+ L  +S  P+  +P LD  + +    D  
Sbjct: 489 LMKSEFDEDGDPIQMLKPRFTYNPLLQHFYQCLHHRSLHPNTQIPKLDPIIAEYINPDQI 548

Query: 527 LFSQNKSVIDTFHKRFELKENPKLKKP-----------------------RRHYLREKAS 586
           + +++K  I  F  +F L +     K                        + H+      
Sbjct: 549 IMNKSKQSIKNFADKFPLTKTTVFSKTPAISGGNTNGTTSNTNNTMIGGVKYHWKDGMLI 608

Query: 587 G------SSDKEDNEEISAQIVDAVANMPIVK-----VEKIGDSTPLQDFEAMMSRRDSP 646
           G      S   +D  E   + V+  +   + K     V ++G   P+Q+F+ M++RRD  
Sbjct: 609 GEEINLDSYVTDDGSEAKKRKVNDFSEFSLDKLVSGYVTEVGTINPVQNFKDMLNRRDM- 668

Query: 647 EWISKAISGMINKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKF 658
           + + KAI+ M  +I  L+ +S     Y KA E +  LR GCI E E +QFN FL  +   
Sbjct: 669 DLVDKAITLMKERILQLVNDSLRDQYYQKAFECIKELRVGCIRESEAEQFNGFLKDMRSL 728

[Close]

BLAST of HG10013027 vs. ExPASy Swiss-Prot
Match: P57108 (Glutathione S-transferase zeta class OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-35
Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 0


Query: 683 SSDDSSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLK 742
           +S +     KL LYS++RSSCS+RVR ALNLKGL YE   VNL +GEQ +P+F ++NP+ 
Sbjct: 2   ASVEQPNKPKLKLYSYFRSSCSFRVRIALNLKGLDYEYVPVNLLKGEQFTPEFLKINPIG 61

Query: 743 YVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQ---------------- 802
           YVP LVDG  V+SDS+AIL+YLEEKYP+  +LPAD+H K++N Q                
Sbjct: 62  YVPALVDGEDVISDSFAILMYLEEKYPEHPILPADIHKKAINYQAANIVSSSIQPLQNLA 121

Query: 803 ------------------------------------------------ADVFLAPQISNA 837
                                                           AD+FL PQI  A
Sbjct: 122 VLNFIGEKVSPDEKVPWVQRHISKGFAALEKLLQGHAGRFATGDEVYLADLFLEPQIHAA 181

[Close]

BLAST of HG10013027 vs. ExPASy Swiss-Prot
Match: Q9ZVQ3 (Glutathione S-transferase Z1 OS=Arabidopsis thaliana OX=3702 GN=GSTZ1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.7e-34
Identity = 85/214 (39.72%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 687 SSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLKYVPV 746
           +S   KL LYS+WRSSC+ RVR AL LKGL YE   VNL +G+Q   DF+++NP+  VP 
Sbjct: 3   NSGEEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPA 62

Query: 747 LVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQ-------------------- 806
           LVDG VV++DS+AI++YL+EKYP+  LLP DLH +++N Q                    
Sbjct: 63  LVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQNLAVIRY 122

Query: 807 --------------------------------------------ADVFLAPQISNATENF 837
                                                       AD+FLAPQI  A   F
Sbjct: 123 IEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIHGAINRF 182

[Close]

BLAST of HG10013027 vs. ExPASy TrEMBL
Match: A0A5D3D0S8 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003960 PE=3 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 23  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 82

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 83  FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 142

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 143 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 202

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 203 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 262

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 263 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 322

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 323 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 382

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 383 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 442

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 443 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 502

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 503 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 562

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 563 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 622

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 623 FLASQQISLISKEEAADS 640

[Close]

BLAST of HG10013027 vs. ExPASy TrEMBL
Match: A0A1S4DSG5 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC103483351 PE=3 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 36  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 95

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 96  FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 155

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 156 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 215

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 216 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 275

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 276 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 335

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 336 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 395

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 396 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 455

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 456 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 515

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 516 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 575

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 576 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 635

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 636 FLASQQISLISKEEAADS 653

[Close]

BLAST of HG10013027 vs. ExPASy TrEMBL
Match: A0A1S3AWC4 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC103483351 PE=3 SV=1)

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 565/618 (91.42%), Postives = 596/618 (96.44%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK+IPRGTVSGDFLDAII+GMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQIPRGTVSGDFLDAIIIGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG++MDSVVVRGRFGQDA
Sbjct: 113 FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIKMDSVVVRGRFGQDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           NEK M+END+LLNIFS+KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 173 NEKTMNENDLLLNIFSQKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPEHRIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPEHRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNASNIMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 293 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRSIVAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPA MQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 413 FPSFSNLPAFMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQNK+VI+TFH+RFELKENPKLKK RRHYLREKAS
Sbjct: 473 KDPDAAVPPLDGTLQKITEPDPDLFSQNKAVINTFHRRFELKENPKLKKSRRHYLREKAS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMPIVKVEK+GDSTPL+DFEAMMSRRDSPEWISKAI+GM 
Sbjct: 533 GSSDKEDNEEISAQIVESVANMPIVKVEKVGDSTPLEDFEAMMSRRDSPEWISKAINGMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL+ENSS  D+Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  FCPE+NLH+F E
Sbjct: 593 SKIFDLIENSSDGDSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFCPEKNLHTFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 653 FLASQQISLISKEEAADS 670

[Close]

BLAST of HG10013027 vs. ExPASy TrEMBL
Match: A0A6J1CZ82 (ATP-dependent DNA helicase 2 subunit KU80 OS=Momordica charantia OX=3673 GN=LOC111016125 PE=3 SV=1)

HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 558/618 (90.29%), Postives = 587/618 (94.98%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLK++PRGTVSGDFLDAIIVGMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKQLPRGTVSGDFLDAIIVGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETEKGKKRLCL+TDALFPIK+PYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFG DA
Sbjct: 113 FGETEKGKKRLCLITDALFPIKDPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGHDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           +EKIMDEND+LLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG LEIS++IKIK
Sbjct: 173 DEKIMDENDVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGVLEISSIIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKS E+PSKVVPPEHRIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSAEDPSKVVPPEHRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNI+RHYYMKDVNVFIAEPSNKRA VAVS
Sbjct: 293 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNILRHYYMKDVNVFIAEPSNKRAIVAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSLYFNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLYFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           F SFSN PA MQPS+EQQ+AAD+LVKMLDLAP+ REEIL PDFTPNPVLERFYRHLELKS
Sbjct: 413 FSSFSNFPASMQPSEEQQEAADDLVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLD TLQKITE DPDLFSQ KS+IDTFH+RFELKENPKLKK RR +LREK S
Sbjct: 473 KDPDAAVPPLDVTLQKITEPDPDLFSQIKSIIDTFHRRFELKENPKLKKSRRRFLREKPS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSS+KEDNE+I AQIVD+ AN   VKVEKIGDSTPLQDFEAMMSRRDSPEWISKAI+GM 
Sbjct: 533 GSSEKEDNEDIPAQIVDSAANPSAVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAINGMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           NKIFDL+ENS   DNY KA+EYLLALRKGCIIEQEPKQFNDFL HLCKFC + NLHSF E
Sbjct: 593 NKIFDLVENSCDGDNYPKALEYLLALRKGCIIEQEPKQFNDFLHHLCKFCLKNNLHSFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLAS+Q++LISK EA DS
Sbjct: 653 FLASKQLTLISKVEAVDS 670

[Close]

BLAST of HG10013027 vs. ExPASy TrEMBL
Match: A0A0A0L4D8 (ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis sativus OX=3659 GN=Csa_3G126130 PE=3 SV=1)

HSP 1 Score: 1099.0 bits (2841), Expect = 0.0e+00
Identity = 560/618 (90.61%), Postives = 589/618 (95.31%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           EDTKNELTEEVGGYQHVVVLQ MKVVDGDLVDVLK IPRGTVSGDFLDAIIVGMDMLIKK
Sbjct: 53  EDTKNELTEEVGGYQHVVVLQKMKVVDGDLVDVLKHIPRGTVSGDFLDAIIVGMDMLIKK 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           FGETE+GKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHG+RMDSVVVRGRFGQDA
Sbjct: 113 FGETERGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGIRMDSVVVRGRFGQDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
            EK M+END+LLNIFS KTNAKMVYVESPTSLLGAIRTRSIAPVTIFRG+LEIS++IKIK
Sbjct: 173 IEKTMNENDLLLNIFSRKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGDLEISSVIKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKKTSEEKFPTLKRYSDKAP TDKFATHEVKVDYEYKS EEPSKVVPPE RIKGYRY
Sbjct: 233 VWVYKKTSEEKFPTLKRYSDKAPLTDKFATHEVKVDYEYKSAEEPSKVVPPELRIKGYRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQVVPISTAEWDAVKFK EKSVKLLGFTNA +IMRHYYMKDVNVFIAEP NKR+ VAVS
Sbjct: 293 GPQVVPISTAEWDAVKFKTEKSVKLLGFTNAFHIMRHYYMKDVNVFIAEPGNKRSIVAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           ALARAMKEMDKVAIVRCVWRQGQG+VVVGVLTPNIS+KDGIADSL+FNVLPFAEDVREFQ
Sbjct: 353 ALARAMKEMDKVAIVRCVWRQGQGSVVVGVLTPNISEKDGIADSLFFNVLPFAEDVREFQ 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSFSNLPALMQPS+EQQ+AAD+ VKMLDLAP  REEIL PDFTPNPVLERFYRHLE+KS
Sbjct: 413 FPSFSNLPALMQPSEEQQEAADDFVKMLDLAPDGREEILQPDFTPNPVLERFYRHLEVKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           KDPDAAVPPLDGTLQKITE DPDLFSQN+SVI+TFHKRFELKENPKLKK RRHYLREKAS
Sbjct: 473 KDPDAAVPPLDGTLQKITEPDPDLFSQNQSVINTFHKRFELKENPKLKKSRRHYLREKAS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GSSDKEDNEEISAQIV++VANMP VKVEKIGD+TPL+DFEAMMSRRDSPEWISKAISGM+
Sbjct: 533 GSSDKEDNEEISAQIVESVANMPTVKVEKIGDTTPLEDFEAMMSRRDSPEWISKAISGMM 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           +KIFDL++NSS   +Y KAIEYL ALRKGCIIEQEPKQFNDFL HL  F PE+NLH+F E
Sbjct: 593 SKIFDLIKNSSDGHSYTKAIEYLRALRKGCIIEQEPKQFNDFLRHLRNFYPEKNLHTFCE 652

Query: 645 FLASQQISLISKEEAADS 663
           FLASQQISLISKEEAADS
Sbjct: 653 FLASQQISLISKEEAADS 670

[Close]

BLAST of HG10013027 vs. TAIR 10
Match: AT1G48050.1 (Ku80 family protein )

HSP 1 Score: 748.0 bits (1930), Expect = 8.0e-216
Identity = 371/618 (60.03%), Postives = 478/618 (77.35%), Query Frame = 0


Query: 45  EDTKNELTEEVGGYQHVVVLQNMKVVDGDLVDVLKRIPRGTVSGDFLDAIIVGMDMLIKK 104
           E+T NEL  E+GGY++V VL+N++VVD    + +K++PRGTV+GDFLDA+IVGMDMLIK 
Sbjct: 53  EETGNELAREIGGYENVTVLRNIRVVDELAAEHVKQLPRGTVAGDFLDALIVGMDMLIKM 112

Query: 105 FGETEKGKKRLCLVTDALFPIKEPYEGTKEDQVTTIAQQMTKHGMRMDSVVVRGRFGQDA 164
           +G   KGKKR+CL+T+A  P K+P+EGTK+DQV+TIA +M   G++M+S+V+R     DA
Sbjct: 113 YGNAHKGKKRMCLITNAACPTKDPFEGTKDDQVSTIAMKMAAEGIKMESIVMRSNLSGDA 172

Query: 165 NEKIMDENDILLNIFSEKTNAKMVYVESPTSLLGAIRTRSIAPVTIFRGNLEISTLIKIK 224
           +E++++END LL +FS    AK V V+SP SLLG+++TR +APVT+FRG+LEI+  +KIK
Sbjct: 173 HERVIEENDHLLTLFSSNAIAKTVNVDSPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIK 232

Query: 225 VWVYKKTSEEKFPTLKRYSDKAPPTDKFATHEVKVDYEYKSVEEPSKVVPPEHRIKGYRY 284
           VWVYKK +EE+ PTLK YSDKAPPTDKFA HEVKVDY+YK   E ++V+ PE RIKG+RY
Sbjct: 233 VWVYKKVAEERLPTLKMYSDKAPPTDKFAKHEVKVDYDYKVTAESTEVIAPEERIKGFRY 292

Query: 285 GPQVVPISTAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPSNKRATVAVS 344
           GPQV+PIS  + + +KFK +K +KLLGFT ASNI+RHYYMKDVN+ + +PS +++ +AVS
Sbjct: 293 GPQVIPISPDQIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVS 352

Query: 345 ALARAMKEMDKVAIVRCVWRQGQGTVVVGVLTPNISKKDGIADSLYFNVLPFAEDVREFQ 404
           A+AR MKE +KVAIVRCVWR GQG VVVGVLTPN+S++D   DS YFNVLPFAEDVREF 
Sbjct: 353 AIAREMKETNKVAIVRCVWRNGQGNVVVGVLTPNVSERDDTPDSFYFNVLPFAEDVREFP 412

Query: 405 FPSFSNLPALMQPSDEQQQAADELVKMLDLAPARREEILPPDFTPNPVLERFYRHLELKS 464
           FPSF+ LP+  +P ++QQ  AD LVKMLDLAP+  EE+L PD TPNPVL+RFY +LELKS
Sbjct: 413 FPSFNKLPSSWKPDEQQQAVADNLVKMLDLAPSAEEEVLKPDLTPNPVLQRFYEYLELKS 472

Query: 465 KDPDAAVPPLDGTLQKITELDPDLFSQNKSVIDTFHKRFELKENPKLKKPRRHYLREKAS 524
           K  DA +PP+DGT +++ E DP+L S NKS++DTF   FE+KENPKLKK  +  LR+K S
Sbjct: 473 KSTDATLPPMDGTFKRLMEQDPELSSNNKSIMDTFRGSFEVKENPKLKKASKRLLRDKPS 532

Query: 525 GSSDKEDNEEISAQIVDAVANMPIVKVEKIGDSTPLQDFEAMMSRRDSPEWISKAISGMI 584
           GS D EDN  I+    DA  N    K++ +GD+ P+QDFEAM+SRRD  +W  KAI+ M 
Sbjct: 533 GSDD-EDNRMIT---YDAKEN----KIDIVGDANPIQDFEAMISRRDKTDWTEKAITQMK 592

Query: 585 NKIFDLLENSSSCDNYLKAIEYLLALRKGCIIEQEPKQFNDFLGHLCKFCPERNLHSFFE 644
           N I  L+EN +  D   KA+E +LALRKGC++EQEPKQFN+FL HL K C ERNL    E
Sbjct: 593 NLIMKLVENCT--DEGDKALECVLALRKGCVLEQEPKQFNEFLNHLFKLCQERNLSHLLE 652

Query: 645 FLASQQISLISKEEAADS 663
              S++I+LI K EAADS
Sbjct: 653 HFMSKKITLIPKSEAADS 660

[Close]

BLAST of HG10013027 vs. TAIR 10
Match: AT2G02390.1 (glutathione S-transferase zeta 1 )

HSP 1 Score: 147.5 bits (371), Expect = 4.8e-35
Identity = 85/214 (39.72%), Postives = 111/214 (51.87%), Query Frame = 0


Query: 687 SSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLKYVPV 746
           +S   KL LYS+WRSSC+ RVR AL LKGL YE   VNL +G+Q   DF+++NP+  VP 
Sbjct: 3   NSGEEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPA 62

Query: 747 LVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQ-------------------- 806
           LVDG VV++DS+AI++YL+EKYP+  LLP DLH +++N Q                    
Sbjct: 63  LVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQNLAVIRY 122

Query: 807 --------------------------------------------ADVFLAPQISNATENF 837
                                                       AD+FLAPQI  A   F
Sbjct: 123 IEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIHGAINRF 182

[Close]

BLAST of HG10013027 vs. TAIR 10
Match: AT2G02380.1 (glutathione S-transferase (class zeta) 2 )

HSP 1 Score: 144.4 bits (363), Expect = 4.0e-34
Identity = 83/209 (39.71%), Postives = 109/209 (52.15%), Query Frame = 0


Query: 691 SKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLKYVPVLVDG 750
           +KL LYS+WRSSC+ RVR AL LKGL YE   VNL +G+Q   DF+++NP+  VP LVDG
Sbjct: 10  AKLKLYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDSDFKKINPMGTVPALVDG 69

Query: 751 PVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQ------------------------ 810
            VV++DS+AI++YL++KYP+  LLP+D H +++N Q                        
Sbjct: 70  DVVINDSFAIIMYLDDKYPEPPLLPSDYHKRAVNYQATSIVMSGIQPHQNMALFRYLEDK 129

Query: 811 ----------------------------------------ADVFLAPQISNATENFDIDM 836
                                                   AD+FLAPQI  A   F I+M
Sbjct: 130 INAEEKTAWITNAITKGFTALEKLLVSCAGKYATGDEVYLADLFLAPQIHAAFNRFHINM 189

[Close]

BLAST of HG10013027 vs. TAIR 10
Match: AT2G02390.3 (glutathione S-transferase zeta 1 )

HSP 1 Score: 140.6 bits (353), Expect = 5.8e-33
Identity = 85/221 (38.46%), Postives = 111/221 (50.23%), Query Frame = 0


Query: 687 SSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLS-------PDFERLN 746
           +S   KL LYS+WRSSC+ RVR AL LKGL YE   VNL +G+Q          DF+++N
Sbjct: 3   NSGEEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKIN 62

Query: 747 PLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQ------------- 806
           P+  VP LVDG VV++DS+AI++YL+EKYP+  LLP DLH +++N Q             
Sbjct: 63  PMGTVPALVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQAMSIVLSGIQPHQ 122

Query: 807 ---------------------------------------------------ADVFLAPQI 837
                                                              AD+FLAPQI
Sbjct: 123 NLAVIRYIEEKINVEEKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQI 182

[Close]

BLAST of HG10013027 vs. TAIR 10
Match: AT2G02390.2 (glutathione S-transferase zeta 1 )

HSP 1 Score: 123.6 bits (309), Expect = 7.3e-28
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 687 SSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYECRAVNLGRGEQLSPDFERLNPLKYVPV 746
           +S   KL LYS+WRSSC+ RVR AL LKGL YE   VNL +G+Q   DF+++NP+  VP 
Sbjct: 3   NSGEEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPA 62

Query: 747 LVDGPVVVSDSYAILLYLEEKYPQKALLPADLHLKSLNLQA 788
           LVDG VV++DS+AI++YL+EKYP+  LLP DLH +++N QA
Sbjct: 63  LVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAVNYQA 103

The following BLAST results are available for this feature:

BLAST of HG10013027 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898554.1	0.0e+00	93.37	ATP-dependent DNA helicase 2 subunit KU80 [Benincasa hispida]	[more]
XP_016898908.1	0.0e+00	91.42	PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 isoform X2 [Cucumis melo]	[more]
XP_008438156.1	0.0e+00	91.42	PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 isoform X1 [Cucumis melo]	[more]
KAA0049037.1	0.0e+00	91.42	ATP-dependent DNA helicase 2 subunit KU80 isoform X2 [Cucumis melo var. makuwa] ...	[more]
XP_022147110.1	0.0e+00	90.29	ATP-dependent DNA helicase 2 subunit KU80 [Momordica charantia]	[more]

BLAST of HG10013027 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ09	1.1e-214	60.03	ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana OX=3702 GN=KU8...	[more]
Q75IP6	6.2e-205	59.31	ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q54LY5	1.1e-65	27.49	X-ray repair cross-complementing protein 5 OS=Dictyostelium discoideum OX=44689 ...	[more]
P57108	2.7e-35	39.45	Glutathione S-transferase zeta class OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
Q9ZVQ3	6.7e-34	39.72	Glutathione S-transferase Z1 OS=Arabidopsis thaliana OX=3702 GN=GSTZ1 PE=1 SV=1	[more]

BLAST of HG10013027 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0S8	0.0e+00	91.42	ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4DSG5	0.0e+00	91.42	ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC10348335...	[more]
A0A1S3AWC4	0.0e+00	91.42	ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis melo OX=3656 GN=LOC10348335...	[more]
A0A6J1CZ82	0.0e+00	90.29	ATP-dependent DNA helicase 2 subunit KU80 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0L4D8	0.0e+00	90.61	ATP-dependent DNA helicase 2 subunit KU80 OS=Cucumis sativus OX=3659 GN=Csa_3G12...	[more]

BLAST of HG10013027 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48050.1	8.0e-216	60.03	Ku80 family protein	[more]
AT2G02390.1	4.8e-35	39.72	glutathione S-transferase zeta 1	[more]
AT2G02380.1	4.0e-34	39.71	glutathione S-transferase (class zeta) 2	[more]
AT2G02390.3	5.8e-33	38.46	glutathione S-transferase zeta 1	[more]
AT2G02390.2	7.3e-28	57.43	glutathione S-transferase zeta 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006164	Ku70/Ku80 beta-barrel domain	SMART	SM00559	ku_4	coord: 270..411 e-value: 4.6E-37 score: 139.1
IPR006164	Ku70/Ku80 beta-barrel domain	PFAM	PF02735	Ku	coord: 218..422 e-value: 2.0E-41 score: 141.9
IPR036494	Ku, C-terminal domain superfamily	GENE3D	1.25.40.240		coord: 525..666 e-value: 2.8E-30 score: 106.8
IPR036494	Ku, C-terminal domain superfamily	SUPERFAMILY	101420	C-terminal domain of Ku80	coord: 539..662
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 687..782 e-value: 2.0E-30 score: 106.9
None	No IPR available	GENE3D	1.20.1050.10		coord: 783..838 e-value: 5.8E-14 score: 54.2
None	No IPR available	GENE3D	1.10.1600.10		coord: 415..511 e-value: 1.2E-17 score: 66.2
None	No IPR available	SFLD	SFLDG00358	Main_(cytGST)	coord: 693..786 e-value: 3.8E-28 score: 93.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 514..533
None	No IPR available	PANTHER	PTHR12604:SF4	X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 5	coord: 39..662
None	No IPR available	PANTHER	PTHR12604	KU AUTOANTIGEN DNA HELICASE	coord: 39..662
IPR004045	Glutathione S-transferase, N-terminal	PFAM	PF13417	GST_N_3	coord: 695..771 e-value: 4.9E-16 score: 58.9
IPR004045	Glutathione S-transferase, N-terminal	PROSITE	PS50404	GST_NTER	coord: 691..772 score: 25.920601
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 41..193 e-value: 1.2E-30 score: 108.5
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 45..224
IPR005160	Ku70/Ku80 C-terminal arm	PFAM	PF03730	Ku_C	coord: 444..524 e-value: 1.8E-7 score: 31.7
IPR016194	SPOC-like, C-terminal domain superfamily	GENE3D	2.40.290.10		coord: 208..411 e-value: 3.0E-57 score: 195.5
IPR016194	SPOC-like, C-terminal domain superfamily	SUPERFAMILY	100939	SPOC domain-like	coord: 207..510
IPR014893	Ku, C-terminal	PFAM	PF08785	Ku_PK_bind	coord: 558..662 e-value: 8.8E-27 score: 93.6
IPR040079	Glutathione Transferase family	SFLD	SFLDS00019	Glutathione_Transferase_(cyto	coord: 693..786 e-value: 3.8E-28 score: 93.3
IPR024193	Ku80	CDD	cd00873	KU80	coord: 208..509 e-value: 7.7482E-101 score: 313.072
IPR034333	Glutathione S-transferases, class Zeta , N-terminal	CDD	cd03042	GST_N_Zeta	coord: 693..765 e-value: 3.99089E-36 score: 128.842
IPR036282	Glutathione S-transferase, C-terminal domain superfamily	SUPERFAMILY	47616	GST C-terminal domain-like	coord: 787..835
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 691..775

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013027.1	HG10013027.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071480	cellular response to gamma radiation
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006303	double-strand break repair via nonhomologous end joining
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009408	response to heat
biological_process	GO:0000723	telomere maintenance
biological_process	GO:0071481	cellular response to X-ray
cellular_component	GO:0043564	Ku70:Ku80 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0042162	telomeric DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding