HG10012954 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012954
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	E3 ubiquitin-protein ligase ATL4
Location	Chr01: 25616733 .. 25617770 (+)
RNA-Seq Expression	HG10012954
Synteny	HG10012954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCCGCCGCCGCCGCCGCCGCCAATGCCGGACGATTTCGGAGGCTCCGTCATTGACTACGTTTCATCCTCTCCTCCTCTTCTTCCGGCGACGGCCACGAGTCACTCTTCTTCGTTGAAGAATCTGAGTCCGAGCATATTGATCATTCTTACGATTCTCGCTTTTACCGCTTTTGCTTCGGTGATTCTTTGCCTTGTTCTCCGGTACCTTAACCGGCGGTGTCTTCTCCGTCTCTCCGCCGTGCCTGGATCGTCATCGTCGTCGTCTGCTTCTAGTCGCCGCATTACTCCAGCAGAACAGAATGCGGTTCGATGTACTAATTCTTTTTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTTACGCGCCGTTCTTCCACTGCCGCGGCCGATTGCGCCGTTTGTTTGTCGAAATTTGAGGCGGAAGATCAGCTTCGTCTTCTTCCGCTCTGTTGCCATGCCTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCAGCCATATTCGCCTCCGAATCTGATGTAATGAAGGCATCTATGGCTTCCTACGCCGCGGAAGGTCGCGCCGGAGACAGTTTTAGGCTCGAAATTGGCAGTATTAGCCGCAGGCAGGCCCCTTCCGATTCTGGCGAAGGAAGAAGATCGTATTCGATAGGATCGTTCGAGTATTTCGTGGAAGAAGATTCTGAAGTAAACTTCACTAATGCTCACCGGCGGAGCGTTTCCGATAAGGAAGACATTGAAGCTCCTGTATCGGCGGCATCTACAGAACGAAGCCTAGCGGCGGAAGTCGGCTCCGGAAGGAATTGGCTGAAGGACTACGTCGATAGACTCTCTAATTCTGTCTCATCTCGTGCACTGTCTTTCCGAGGTTCCGGCAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTCACCATCGCCGGAGAATGGGAACAAGAGAACAGCCGCGTCGGCGAGGAAATAAGCGAGCTATTCCGATGGTTTTCAGGGGTATGA

mRNA sequence

ATGGCTTCTCCGCCGCCGCCGCCGCCGCCAATGCCGGACGATTTCGGAGGCTCCGTCATTGACTACGTTTCATCCTCTCCTCCTCTTCTTCCGGCGACGGCCACGAGTCACTCTTCTTCGTTGAAGAATCTGAGTCCGAGCATATTGATCATTCTTACGATTCTCGCTTTTACCGCTTTTGCTTCGGTGATTCTTTGCCTTGTTCTCCGGTACCTTAACCGGCGGTGTCTTCTCCGTCTCTCCGCCGTGCCTGGATCGTCATCGTCGTCGTCTGCTTCTAGTCGCCGCATTACTCCAGCAGAACAGAATGCGGTTCGATGTACTAATTCTTTTTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTTACGCGCCGTTCTTCCACTGCCGCGGCCGATTGCGCCGTTTGTTTGTCGAAATTTGAGGCGGAAGATCAGCTTCGTCTTCTTCCGCTCTGTTGCCATGCCTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCAGCCATATTCGCCTCCGAATCTGATGTAATGAAGGCATCTATGGCTTCCTACGCCGCGGAAGGTCGCGCCGGAGACAGTTTTAGGCTCGAAATTGGCAGTATTAGCCGCAGGCAGGCCCCTTCCGATTCTGGCGAAGGAAGAAGATCGTATTCGATAGGATCGTTCGAGTATTTCGTGGAAGAAGATTCTGAAGTAAACTTCACTAATGCTCACCGGCGGAGCGTTTCCGATAAGGAAGACATTGAAGCTCCTGTATCGGCGGCATCTACAGAACGAAGCCTAGCGGCGGAAGTCGGCTCCGGAAGGAATTGGCTGAAGGACTACGTCGATAGACTCTCTAATTCTGTCTCATCTCGTGCACTGTCTTTCCGAGGTTCCGGCAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTCACCATCGCCGGAGAATGGGAACAAGAGAACAGCCGCGTCGGCGAGGAAATAAGCGAGCTATTCCGATGGTTTTCAGGGGTATGA

Coding sequence (CDS)

ATGGCTTCTCCGCCGCCGCCGCCGCCGCCAATGCCGGACGATTTCGGAGGCTCCGTCATTGACTACGTTTCATCCTCTCCTCCTCTTCTTCCGGCGACGGCCACGAGTCACTCTTCTTCGTTGAAGAATCTGAGTCCGAGCATATTGATCATTCTTACGATTCTCGCTTTTACCGCTTTTGCTTCGGTGATTCTTTGCCTTGTTCTCCGGTACCTTAACCGGCGGTGTCTTCTCCGTCTCTCCGCCGTGCCTGGATCGTCATCGTCGTCGTCTGCTTCTAGTCGCCGCATTACTCCAGCAGAACAGAATGCGGTTCGATGTACTAATTCTTTTTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTTACGCGCCGTTCTTCCACTGCCGCGGCCGATTGCGCCGTTTGTTTGTCGAAATTTGAGGCGGAAGATCAGCTTCGTCTTCTTCCGCTCTGTTGCCATGCCTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCAGCCATATTCGCCTCCGAATCTGATGTAATGAAGGCATCTATGGCTTCCTACGCCGCGGAAGGTCGCGCCGGAGACAGTTTTAGGCTCGAAATTGGCAGTATTAGCCGCAGGCAGGCCCCTTCCGATTCTGGCGAAGGAAGAAGATCGTATTCGATAGGATCGTTCGAGTATTTCGTGGAAGAAGATTCTGAAGTAAACTTCACTAATGCTCACCGGCGGAGCGTTTCCGATAAGGAAGACATTGAAGCTCCTGTATCGGCGGCATCTACAGAACGAAGCCTAGCGGCGGAAGTCGGCTCCGGAAGGAATTGGCTGAAGGACTACGTCGATAGACTCTCTAATTCTGTCTCATCTCGTGCACTGTCTTTCCGAGGTTCCGGCAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTCACCATCGCCGGAGAATGGGAACAAGAGAACAGCCGCGTCGGCGAGGAAATAAGCGAGCTATTCCGATGGTTTTCAGGGGTATGA

Protein sequence

MASPPPPPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV

Homology

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BLAST of HG10012954 vs. NCBI nr
Match: XP_038880516.1 (E3 ubiquitin-protein ligase ATL4 [Benincasa hispida])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 328/340 (96.47%), Postives = 332/340 (97.65%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVIL 65
           PPPPP+PDDFGGSVIDYVSSSPPL P  A SHSSSLKNLSPSILIILTILAFTAFASVIL
Sbjct: 4   PPPPPLPDDFGGSVIDYVSSSPPLPPTPAASHSSSLKNLSPSILIILTILAFTAFASVIL 63

Query: 66  CLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSSV 125
           CLVLRYLNRRCLLRLSAVPGSSSSS+ SSRRI PAEQNAVRCTNSFSPIE+LPLFSFSSV
Sbjct: 64  CLVLRYLNRRCLLRLSAVPGSSSSSAVSSRRIIPAEQNAVRCTNSFSPIETLPLFSFSSV 123

Query: 126 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE 185
           TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE
Sbjct: 124 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE 183

Query: 186 SDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVN 245
           SDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVN
Sbjct: 184 SDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVN 243

Query: 246 FTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS 305
           FTNAHRRSVSDKED+EAPVSAAS ERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS
Sbjct: 244 FTNAHRRSVSDKEDVEAPVSAASVERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS 303

Query: 306 GRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GRFFTGSSRRSEVTI GEWEQENSRVGEEISELFRWFSGV
Sbjct: 304 GRFFTGSSRRSEVTIGGEWEQENSRVGEEISELFRWFSGV 343

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BLAST of HG10012954 vs. NCBI nr
Match: KAA0049111.1 (E3 ubiquitin-protein ligase ATL4 [Cucumis melo var. makuwa] >TYK17452.1 E3 ubiquitin-protein ligase ATL4 [Cucumis melo var. makuwa])

HSP 1 Score: 599.4 bits (1544), Expect = 2.0e-167
Identity = 322/342 (94.15%), Postives = 329/342 (96.20%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPA-TATSHSSSLKNLSPSILIILTILAFTAFASVI 65
           PPPPP+PDDF GS IDYVSSSPPL  +  ++SHSSSLKNLSPSILIILTILAFTAFASVI
Sbjct: 4   PPPPPLPDDFSGSAIDYVSSSPPLPQSPVSSSHSSSLKNLSPSILIILTILAFTAFASVI 63

Query: 66  LCLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSS 125
           LCLVLRYLNRRCLLRLSAV GSSSSSS SSRRI PAEQ AVRCTNSFSPIESLPLFSFSS
Sbjct: 64  LCLVLRYLNRRCLLRLSAVSGSSSSSSVSSRRIIPAEQTAVRCTNSFSPIESLPLFSFSS 123

Query: 126 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 185
           VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS
Sbjct: 124 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 183

Query: 186 ESDVMKASMASYAAEGR-AGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 245
           ESDVMKASMASYAAEGR  GDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 ESDVMKASMASYAAEGRGGGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 243

Query: 246 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 305
           VNFTNAHRRSVSDKEDIEAP+SA STERSLAA+VGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTNAHRRSVSDKEDIEAPISAVSTERSLAADVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 306 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+AGEWEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVAGEWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. NCBI nr
Match: XP_008438276.1 (PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis melo])

HSP 1 Score: 598.2 bits (1541), Expect = 4.5e-167
Identity = 321/342 (93.86%), Postives = 329/342 (96.20%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPA-TATSHSSSLKNLSPSILIILTILAFTAFASVI 65
           PPPPP+PDDF GS IDYVSSSPPL  +  ++SHSSSLKNLSPSILIILTILAFTAFASVI
Sbjct: 4   PPPPPLPDDFSGSAIDYVSSSPPLPQSPVSSSHSSSLKNLSPSILIILTILAFTAFASVI 63

Query: 66  LCLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSS 125
           LCLVLRYLNRRCLLRLSAV GSSSSSS SSRRI PAEQ AVRCTNSFSPIESLPLFSFSS
Sbjct: 64  LCLVLRYLNRRCLLRLSAVSGSSSSSSVSSRRIIPAEQTAVRCTNSFSPIESLPLFSFSS 123

Query: 126 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 185
           VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS
Sbjct: 124 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 183

Query: 186 ESDVMKASMASYAAEGR-AGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 245
           ESDVMKASMASYAAEGR  GDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 ESDVMKASMASYAAEGRGGGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 243

Query: 246 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 305
           VNFTNAHRRSVSDKEDIEAP+SA ST+RSLAA+VGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTNAHRRSVSDKEDIEAPISAVSTDRSLAADVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 306 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+AGEWEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVAGEWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. NCBI nr
Match: XP_022980348.1 (E3 ubiquitin-protein ligase ATL4-like [Cucurbita maxima])

HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-164
Identity = 313/342 (91.52%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 7   PPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILC 66
           PPPP+PD FGGS+IDYVSSSPPL  AT  SHSSSLKNLSPSILIILT+LA TAFASVILC
Sbjct: 4   PPPPLPDAFGGSIIDYVSSSPPLPSATVVSHSSSLKNLSPSILIILTVLALTAFASVILC 63

Query: 67  LVLRYLNRRCLLRLSAVPGSSSSSSASS---RRITPAEQNAVRCTNSFSPIESLPLFSFS 126
           LVLRYLNRRCLLRLSAVPGSSS+SS+SS   R I P EQ+AVRCTNSFSPI+SLPLFSFS
Sbjct: 64  LVLRYLNRRCLLRLSAVPGSSSTSSSSSVSRRHIIPVEQSAVRCTNSFSPIDSLPLFSFS 123

Query: 127 SVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 186
           SVTRRSSTA ADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA
Sbjct: 124 SVTRRSSTAVADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 183

Query: 187 SESDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 246
           SESDVMKASMASYAAEGR GDSFRLEIGSISRRQ PS+SGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQIPSESGEGRRSYSIGSFEYFVEEDSE 243

Query: 247 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 306
           VNFT+AHRRSVSDKEDIEAPVSA STE+SLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTHAHRRSVSDKEDIEAPVSAVSTEQSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 307 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+ G+WEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVVGDWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. NCBI nr
Match: XP_023526337.1 (E3 ubiquitin-protein ligase ATL4-like [Cucurbita pepo subsp. pepo] >KAG7018898.1 E3 ubiquitin-protein ligase ATL4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-164
Identity = 313/342 (91.52%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 7   PPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILC 66
           PPPP+PD FGGS+IDYVSSSPPL  AT  SHSSSLKNLSPSILIILT+LA TAFASVILC
Sbjct: 4   PPPPLPDAFGGSIIDYVSSSPPLPAATVVSHSSSLKNLSPSILIILTVLALTAFASVILC 63

Query: 67  LVLRYLNRRCLLRLSAVPGSSSSSSASS---RRITPAEQNAVRCTNSFSPIESLPLFSFS 126
           LVLRYLNRRCLLRLSAVPGSSS+SS+SS   R I P EQ+AVRCTNSFSPI+SLPLFSFS
Sbjct: 64  LVLRYLNRRCLLRLSAVPGSSSTSSSSSVSRRHIIPVEQSAVRCTNSFSPIDSLPLFSFS 123

Query: 127 SVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 186
           SVTRRSSTA ADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA
Sbjct: 124 SVTRRSSTAVADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 183

Query: 187 SESDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 246
           SESDVMKASMASYAAEGR GDSFRLEIGSISRRQ PS+SGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQIPSESGEGRRSYSIGSFEYFVEEDSE 243

Query: 247 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 306
           VNFT+AHRRSVSDKEDIEAPVSA STE+SLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTHAHRRSVSDKEDIEAPVSAVSTEQSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 307 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+ G+WEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVVGDWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. ExPASy Swiss-Prot
Match: Q9LY41 (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-75
Identity = 183/330 (55.45%), Postives = 223/330 (67.58%), Query Frame = 0


Query: 36  SHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSSSSSA--- 95
           SHSSSL +L PS+L+I+ IL  T   SV +C +LR LN RC  R S +P SSSSS A   
Sbjct: 16  SHSSSLDSLKPSVLVIILILLMTLLISVSICFLLRCLN-RCSHR-SVLPLSSSSSVATVT 75

Query: 96  ------SSRRITPAEQNAVRCTNSFSPIESLPLFSFSSVTRRSSTA-AADCAVCLSKFEA 155
                 S  R++P        T   S ++SLP+F FSSVTRRSS+  + DCAVCLSKFE 
Sbjct: 76  SDSRRFSGHRVSPE-------TERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEP 135

Query: 156 EDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRAGDS 215
           EDQLRLLPLCCHAFHA C+D WL SNQ+CPLCRS +FASESD+MK+     +  G   +S
Sbjct: 136 EDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENS 195

Query: 216 FRLEIGSIS-RRQAP-SDSGEGRRSYSIGSFEYFVEE-DSEVNFTNAHRRSVSDKEDIEA 275
           FRLEIGSIS RRQ P  +S E  R+YSIGSF+Y V++ DSE++ +N +R    D     A
Sbjct: 196 FRLEIGSISRRRQTPIPESVEQHRTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTA 255

Query: 276 PVSAAST-----ERSLAAEVGS--GRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRR 335
             +A +T     E SLAA++G+   R+WLKDYVDRLS  +SSRA+SFR SGRFFTGSSRR
Sbjct: 256 TATAVTTNPTSFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRR 315

Query: 336 SEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           SE       + E +  GEEISELFRW SGV
Sbjct: 316 SEELTV--MDLEANHAGEEISELFRWLSGV 334

[Close]

BLAST of HG10012954 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 28  PLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYL----NRRCLLRLSAV 87
           P+L   +    SS   +SP++L ++ ILA   F S +L L++R+L    +     R +  
Sbjct: 25  PILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRF 84

Query: 88  PGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSSVTRRSSTAAA--------D 147
           P  S+S +   +       N      +F  I++LP+F +  +   +             D
Sbjct: 85  PEISTSDALQRQLQQLFHLNDSGLDQAF--IDALPVFHYKEIVGSAGGGGGNGAAQEPFD 144

Query: 148 CAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 184
           CAVCL +F  +D+LRLLP+C HAFH  C+DTWLQSN +CPLCR  +F+
Sbjct: 145 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS 190

[Close]

BLAST of HG10012954 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-16
Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  LSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSSSSSA-SSRRITPAEQ 103
           +SP +L+ +T+L+   F + ++ L++++L+R       A  G + SS+A   R  T    
Sbjct: 32  ISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNL 91

Query: 104 NAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQ 163
           +      SF  I++LPL  + ++        +DCAVCL +F AED+LRLLP C HAFH +
Sbjct: 92  HDAEIDQSF--IDALPLLHYKTMIGLRHD-LSDCAVCLREFTAEDELRLLPKCSHAFHVE 151

Query: 164 CVDTWLQSNQSCPLCR 179
           C+DTWL +N +CPLCR
Sbjct: 152 CIDTWLLTNSTCPLCR 164

[Close]

BLAST of HG10012954 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.8e-16
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 29  LLPATATSHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSS 88
           L  ++++S S     +SP IL I+ +L+   F   IL L++RY  ++    LS+ P  S+
Sbjct: 34  LTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESN 93

Query: 89  SSSASSRRITPAEQ-----NAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKF 148
            +   S   T   Q     +        + I++LP+F +  +  + +    DCAVCL +F
Sbjct: 94  QNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEI--KGTKEPFDCAVCLCEF 153

Query: 149 EAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA--SESDVMKASMASYAAEGR 208
             +D+LRLLP C HAFH  C+DTWL SN +CPLCR  +F+   + +    +   +A +  
Sbjct: 154 SEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFNFGFFAGDDG 213

Query: 209 AGDSFRLEIGSISRRQAPSDSGEGRRSYSI 232
            G         +S  Q P+++  G+R +S+
Sbjct: 214 GGGV------RVSPVQKPAENEIGKRVFSV 235

[Close]

BLAST of HG10012954 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.7e-15
Identity = 91/308 (29.55%), Postives = 142/308 (46.10%), Query Frame = 0


Query: 18  SVIDYVSSS--PPLLPATATSHSSSLKN-LSPSILIILTILAFTAFASVILCLVLRYLNR 77
           S  + +SSS  PPL+P  + +  S+L + ++P+IL+I+ IL+   F S +L +++++L  
Sbjct: 10  STQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL-- 69

Query: 78  RCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTN------SFSPIESLPLFSFSSVTRR 137
                   +  S  S       +T  +    +  N        S I++LP+F + S+   
Sbjct: 70  --------LTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIV-G 129

Query: 138 SSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDV 197
              +  DC VCL +FE ED+LRLLP C HAFH +C+DTWL S+ +CPLCRS + +  S  
Sbjct: 130 LKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSH 189

Query: 198 MKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVNFTN 257
              S +SY           LE    SR   P      +  Y        V  DSE     
Sbjct: 190 HNLS-SSYL--------LVLESEQSSRDMVPVLESNSQLGYD-------VNNDSESTRIR 249

Query: 258 AHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYV----DRLSNSVSSRALSFRG 313
           + R+S     D++        E+ +  EV  G+    D+V    D+  NS+S  + +  G
Sbjct: 250 SGRKSCDPDGDMD-----GLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDG 285

[Close]

BLAST of HG10012954 vs. ExPASy TrEMBL
Match: A0A5D3D0U7 (E3 ubiquitin-protein ligase ATL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003160 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.8e-168
Identity = 322/342 (94.15%), Postives = 329/342 (96.20%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPA-TATSHSSSLKNLSPSILIILTILAFTAFASVI 65
           PPPPP+PDDF GS IDYVSSSPPL  +  ++SHSSSLKNLSPSILIILTILAFTAFASVI
Sbjct: 4   PPPPPLPDDFSGSAIDYVSSSPPLPQSPVSSSHSSSLKNLSPSILIILTILAFTAFASVI 63

Query: 66  LCLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSS 125
           LCLVLRYLNRRCLLRLSAV GSSSSSS SSRRI PAEQ AVRCTNSFSPIESLPLFSFSS
Sbjct: 64  LCLVLRYLNRRCLLRLSAVSGSSSSSSVSSRRIIPAEQTAVRCTNSFSPIESLPLFSFSS 123

Query: 126 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 185
           VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS
Sbjct: 124 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 183

Query: 186 ESDVMKASMASYAAEGR-AGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 245
           ESDVMKASMASYAAEGR  GDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 ESDVMKASMASYAAEGRGGGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 243

Query: 246 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 305
           VNFTNAHRRSVSDKEDIEAP+SA STERSLAA+VGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTNAHRRSVSDKEDIEAPISAVSTERSLAADVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 306 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+AGEWEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVAGEWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. ExPASy TrEMBL
Match: A0A1S3AVN9 (E3 ubiquitin-protein ligase ATL4 OS=Cucumis melo OX=3656 GN=LOC103483437 PE=4 SV=1)

HSP 1 Score: 598.2 bits (1541), Expect = 2.2e-167
Identity = 321/342 (93.86%), Postives = 329/342 (96.20%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPA-TATSHSSSLKNLSPSILIILTILAFTAFASVI 65
           PPPPP+PDDF GS IDYVSSSPPL  +  ++SHSSSLKNLSPSILIILTILAFTAFASVI
Sbjct: 4   PPPPPLPDDFSGSAIDYVSSSPPLPQSPVSSSHSSSLKNLSPSILIILTILAFTAFASVI 63

Query: 66  LCLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSS 125
           LCLVLRYLNRRCLLRLSAV GSSSSSS SSRRI PAEQ AVRCTNSFSPIESLPLFSFSS
Sbjct: 64  LCLVLRYLNRRCLLRLSAVSGSSSSSSVSSRRIIPAEQTAVRCTNSFSPIESLPLFSFSS 123

Query: 126 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 185
           VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS
Sbjct: 124 VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 183

Query: 186 ESDVMKASMASYAAEGR-AGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 245
           ESDVMKASMASYAAEGR  GDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 ESDVMKASMASYAAEGRGGGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 243

Query: 246 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 305
           VNFTNAHRRSVSDKEDIEAP+SA ST+RSLAA+VGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTNAHRRSVSDKEDIEAPISAVSTDRSLAADVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 306 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+AGEWEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVAGEWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. ExPASy TrEMBL
Match: A0A6J1IZ16 (E3 ubiquitin-protein ligase ATL4-like OS=Cucurbita maxima OX=3661 GN=LOC111479739 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 7.7e-165
Identity = 313/342 (91.52%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 7   PPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILC 66
           PPPP+PD FGGS+IDYVSSSPPL  AT  SHSSSLKNLSPSILIILT+LA TAFASVILC
Sbjct: 4   PPPPLPDAFGGSIIDYVSSSPPLPSATVVSHSSSLKNLSPSILIILTVLALTAFASVILC 63

Query: 67  LVLRYLNRRCLLRLSAVPGSSSSSSASS---RRITPAEQNAVRCTNSFSPIESLPLFSFS 126
           LVLRYLNRRCLLRLSAVPGSSS+SS+SS   R I P EQ+AVRCTNSFSPI+SLPLFSFS
Sbjct: 64  LVLRYLNRRCLLRLSAVPGSSSTSSSSSVSRRHIIPVEQSAVRCTNSFSPIDSLPLFSFS 123

Query: 127 SVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 186
           SVTRRSSTA ADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA
Sbjct: 124 SVTRRSSTAVADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 183

Query: 187 SESDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 246
           SESDVMKASMASYAAEGR GDSFRLEIGSISRRQ PS+SGEGRRSYSIGSFEYFVEEDSE
Sbjct: 184 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQIPSESGEGRRSYSIGSFEYFVEEDSE 243

Query: 247 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 306
           VNFT+AHRRSVSDKEDIEAPVSA STE+SLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTHAHRRSVSDKEDIEAPVSAVSTEQSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 307 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+ G+WEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVVGDWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. ExPASy TrEMBL
Match: A0A6J1EC06 (E3 ubiquitin-protein ligase ATL4-like OS=Cucurbita moschata OX=3662 GN=LOC111431823 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164
Identity = 312/342 (91.23%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 7   PPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILC 66
           PPPP+PD FGGS+IDYVSSSPPL  AT  SHSSSLKNLSPSILIILT+LA TAFASVILC
Sbjct: 4   PPPPLPDAFGGSIIDYVSSSPPLPAATVVSHSSSLKNLSPSILIILTVLALTAFASVILC 63

Query: 67  LVLRYLNRRCLLRLSAVPGSSSSSSASS---RRITPAEQNAVRCTNSFSPIESLPLFSFS 126
           LVLRYLNRRCLLRLSAVPGSSS+SS+SS   R I P EQ+AVRCTNSFSPI+SLPLFSFS
Sbjct: 64  LVLRYLNRRCLLRLSAVPGSSSTSSSSSVSRRHIIPVEQSAVRCTNSFSPIDSLPLFSFS 123

Query: 127 SVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 186
           SVTRRSSTA ADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA
Sbjct: 124 SVTRRSSTAVADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 183

Query: 187 SESDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSE 246
           SESDVMKASMASYAAEGR GDSFRLEIGSISRRQ PS+SGEGRRSYSIGSF+YFVEEDSE
Sbjct: 184 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQIPSESGEGRRSYSIGSFDYFVEEDSE 243

Query: 247 VNFTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 306
           VNFT+AHRRSVSDKEDIEAPVSA STE+SLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR
Sbjct: 244 VNFTHAHRRSVSDKEDIEAPVSAVSTEQSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFR 303

Query: 307 GSGRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GSGRFFTGSSRRSEVT+ G+WEQENSRVGEEISELFRWFSGV
Sbjct: 304 GSGRFFTGSSRRSEVTVVGDWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of HG10012954 vs. ExPASy TrEMBL
Match: A0A0A0L3Z4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G128900 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.4e-160
Identity = 309/340 (90.88%), Postives = 320/340 (94.12%), Query Frame = 0


Query: 6   PPPPPMPDDFGGSVIDYVSSSPPLLPATATSHSSSLKNLSPSILIILTILAFTAFASVIL 65
           PP PP+PDD     I Y SSSPP  P+  +SH +SLKNLSPSILIILTILAFTAF+S IL
Sbjct: 4   PPTPPLPDDL---AIGYFSSSPPPPPSPVSSH-TSLKNLSPSILIILTILAFTAFSSGIL 63

Query: 66  CLVLRYLNRRCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSSV 125
           CLVLRYLNRRCLLRLSA+ GSSSSS+ SSRRI PAEQ+AVRCTNSFSPIESLPLFSFSSV
Sbjct: 64  CLVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSV 123

Query: 126 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE 185
           TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE
Sbjct: 124 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASE 183

Query: 186 SDVMKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVN 245
           SDVMKASMASYAAEGR GDSFRLEIGSISRRQAPSDS EGRRSYSIGSFEYFVEEDSEVN
Sbjct: 184 SDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVN 243

Query: 246 FTNAHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS 305
           FTNAHRRSVSDKEDIEAP+SA STERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS
Sbjct: 244 FTNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGS 303

Query: 306 GRFFTGSSRRSEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           GRFFTGSSRRSEVT+AGEWEQEN+RVGEEISELFRWFSGV
Sbjct: 304 GRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339

[Close]

BLAST of HG10012954 vs. TAIR 10
Match: AT3G60220.1 (TOXICOS EN LEVADURA 4 )

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-76
Identity = 183/330 (55.45%), Postives = 223/330 (67.58%), Query Frame = 0


Query: 36  SHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSSSSSA--- 95
           SHSSSL +L PS+L+I+ IL  T   SV +C +LR LN RC  R S +P SSSSS A   
Sbjct: 16  SHSSSLDSLKPSVLVIILILLMTLLISVSICFLLRCLN-RCSHR-SVLPLSSSSSVATVT 75

Query: 96  ------SSRRITPAEQNAVRCTNSFSPIESLPLFSFSSVTRRSSTA-AADCAVCLSKFEA 155
                 S  R++P        T   S ++SLP+F FSSVTRRSS+  + DCAVCLSKFE 
Sbjct: 76  SDSRRFSGHRVSPE-------TERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEP 135

Query: 156 EDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRAGDS 215
           EDQLRLLPLCCHAFHA C+D WL SNQ+CPLCRS +FASESD+MK+     +  G   +S
Sbjct: 136 EDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENS 195

Query: 216 FRLEIGSIS-RRQAP-SDSGEGRRSYSIGSFEYFVEE-DSEVNFTNAHRRSVSDKEDIEA 275
           FRLEIGSIS RRQ P  +S E  R+YSIGSF+Y V++ DSE++ +N +R    D     A
Sbjct: 196 FRLEIGSISRRRQTPIPESVEQHRTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTA 255

Query: 276 PVSAAST-----ERSLAAEVGS--GRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRR 335
             +A +T     E SLAA++G+   R+WLKDYVDRLS  +SSRA+SFR SGRFFTGSSRR
Sbjct: 256 TATAVTTNPTSFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRR 315

Query: 336 SEVTIAGEWEQENSRVGEEISELFRWFSGV 346
           SE       + E +  GEEISELFRW SGV
Sbjct: 316 SEELTV--MDLEANHAGEEISELFRWLSGV 334

[Close]

BLAST of HG10012954 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 8.3e-18
Identity = 58/168 (34.52%), Postives = 89/168 (52.98%), Query Frame = 0


Query: 28  PLLPATATSHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYL----NRRCLLRLSAV 87
           P+L   +    SS   +SP++L ++ ILA   F S +L L++R+L    +     R +  
Sbjct: 25  PILSPPSPPPPSSGNRISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRF 84

Query: 88  PGSSSSSSASSRRITPAEQNAVRCTNSFSPIESLPLFSFSSVTRRSSTAAA--------D 147
           P  S+S +   +       N      +F  I++LP+F +  +   +             D
Sbjct: 85  PEISTSDALQRQLQQLFHLNDSGLDQAF--IDALPVFHYKEIVGSAGGGGGNGAAQEPFD 144

Query: 148 CAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA 184
           CAVCL +F  +D+LRLLP+C HAFH  C+DTWLQSN +CPLCR  +F+
Sbjct: 145 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS 190

[Close]

BLAST of HG10012954 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-17
Identity = 53/136 (38.97%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  LSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSSSSSA-SSRRITPAEQ 103
           +SP +L+ +T+L+   F + ++ L++++L+R       A  G + SS+A   R  T    
Sbjct: 32  ISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNL 91

Query: 104 NAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQ 163
           +      SF  I++LPL  + ++        +DCAVCL +F AED+LRLLP C HAFH +
Sbjct: 92  HDAEIDQSF--IDALPLLHYKTMIGLRHD-LSDCAVCLREFTAEDELRLLPKCSHAFHVE 151

Query: 164 CVDTWLQSNQSCPLCR 179
           C+DTWL +N +CPLCR
Sbjct: 152 CIDTWLLTNSTCPLCR 164

[Close]

BLAST of HG10012954 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-17
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 29  LLPATATSHSSSLKNLSPSILIILTILAFTAFASVILCLVLRYLNRRCLLRLSAVPGSSS 88
           L  ++++S S     +SP IL I+ +L+   F   IL L++RY  ++    LS+ P  S+
Sbjct: 34  LTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESN 93

Query: 89  SSSASSRRITPAEQ-----NAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKF 148
            +   S   T   Q     +        + I++LP+F +  +  + +    DCAVCL +F
Sbjct: 94  QNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEI--KGTKEPFDCAVCLCEF 153

Query: 149 EAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA--SESDVMKASMASYAAEGR 208
             +D+LRLLP C HAFH  C+DTWL SN +CPLCR  +F+   + +    +   +A +  
Sbjct: 154 SEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFNFGFFAGDDG 213

Query: 209 AGDSFRLEIGSISRRQAPSDSGEGRRSYSI 232
            G         +S  Q P+++  G+R +S+
Sbjct: 214 GGGV------RVSPVQKPAENEIGKRVFSV 235

[Close]

BLAST of HG10012954 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-16
Identity = 91/308 (29.55%), Postives = 142/308 (46.10%), Query Frame = 0


Query: 18  SVIDYVSSS--PPLLPATATSHSSSLKN-LSPSILIILTILAFTAFASVILCLVLRYLNR 77
           S  + +SSS  PPL+P  + +  S+L + ++P+IL+I+ IL+   F S +L +++++L  
Sbjct: 10  STQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFL-- 69

Query: 78  RCLLRLSAVPGSSSSSSASSRRITPAEQNAVRCTN------SFSPIESLPLFSFSSVTRR 137
                   +  S  S       +T  +    +  N        S I++LP+F + S+   
Sbjct: 70  --------LTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIV-G 129

Query: 138 SSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDV 197
              +  DC VCL +FE ED+LRLLP C HAFH +C+DTWL S+ +CPLCRS + +  S  
Sbjct: 130 LKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSH 189

Query: 198 MKASMASYAAEGRAGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEEDSEVNFTN 257
              S +SY           LE    SR   P      +  Y        V  DSE     
Sbjct: 190 HNLS-SSYL--------LVLESEQSSRDMVPVLESNSQLGYD-------VNNDSESTRIR 249

Query: 258 AHRRSVSDKEDIEAPVSAASTERSLAAEVGSGRNWLKDYV----DRLSNSVSSRALSFRG 313
           + R+S     D++        E+ +  EV  G+    D+V    D+  NS+S  + +  G
Sbjct: 250 SGRKSCDPDGDMD-----GLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDG 285

The following BLAST results are available for this feature:

BLAST of HG10012954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880516.1	1.4e-173	96.47	E3 ubiquitin-protein ligase ATL4 [Benincasa hispida]	[more]
KAA0049111.1	2.0e-167	94.15	E3 ubiquitin-protein ligase ATL4 [Cucumis melo var. makuwa] >TYK17452.1 E3 ubiqu...	[more]
XP_008438276.1	4.5e-167	93.86	PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis melo]	[more]
XP_022980348.1	1.6e-164	91.52	E3 ubiquitin-protein ligase ATL4-like [Cucurbita maxima]	[more]
XP_023526337.1	1.6e-164	91.52	E3 ubiquitin-protein ligase ATL4-like [Cucurbita pepo subsp. pepo] >KAG7018898.1...	[more]

BLAST of HG10012954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LY41	2.5e-75	55.45	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV...	[more]
Q9FL07	1.2e-16	34.52	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q9FHG8	5.8e-16	38.97	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]
Q8GW38	9.8e-16	30.95	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q9ZV53	3.7e-15	29.55	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]

BLAST of HG10012954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0U7	9.8e-168	94.15	E3 ubiquitin-protein ligase ATL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3AVN9	2.2e-167	93.86	E3 ubiquitin-protein ligase ATL4 OS=Cucumis melo OX=3656 GN=LOC103483437 PE=4 SV...	[more]
A0A6J1IZ16	7.7e-165	91.52	E3 ubiquitin-protein ligase ATL4-like OS=Cucurbita maxima OX=3661 GN=LOC11147973...	[more]
A0A6J1EC06	1.7e-164	91.23	E3 ubiquitin-protein ligase ATL4-like OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A0A0L3Z4	4.4e-160	90.88	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G128900 P...	[more]

BLAST of HG10012954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60220.1	1.7e-76	55.45	TOXICOS EN LEVADURA 4	[more]
AT5G40250.1	8.3e-18	34.52	RING/U-box superfamily protein	[more]
AT5G57750.1	4.1e-17	38.97	RING/U-box superfamily protein	[more]
AT1G23980.1	7.0e-17	30.95	RING/U-box superfamily protein	[more]
AT2G18650.1	2.7e-16	29.55	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 136..177 e-value: 1.8E-6 score: 37.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 135..178 e-value: 5.6E-13 score: 49.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 136..178 score: 12.341748
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 109..187 e-value: 1.4E-20 score: 74.3
None	No IPR available	PANTHER	PTHR45768:SF16	E3 UBIQUITIN-PROTEIN LIGASE ATL4	coord: 28..327
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 28..327
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 135..178 e-value: 1.29373E-17 score: 73.4901
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 115..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012954.1	HG10012954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding