HG10012927 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCTTCAAGCTCAAACTCTCACCAATCAGTTCGCGCCTTCTGTTGTTCCTTTAAAATCAACCTCGAAATCTCGATTCCCTCATCCAAACGCATGCCGATTCCGTAGAGTTTCGTATCGGGCTCTGAAATGTTCTGTTGCGACGATTTCCGAGTCGGCCTCCACGGAACTGCGGAATGTGAAACCGTTTCCGGCCGAGGTTTCGAGGACGATCATGGAGCTGTCTTCTGTTGGAACACTTTCCTCTTTGAGCCAAGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGATGGTACGCCTCTTTTGAGCTTGAATGAATATTTGCCGGAGTCTATCGACAGGAGGTCCAGCCTCCACGTTCAGGTTATTCATTTTATTTGGTTACTAATGATAATGTAGTATTTTGTATGGATAGATGCATCATATGTCAAGGCTTCAAGTGGGATTTTGAGAAAATGAAAATGAAATCTCTGCATCGGTGTTAGTTCATTACTATATATATATGTATATATTCCGTGTTTGAATTCACGAGTTGAAAGTTGTTTATAGATATGAAGAAATGTGTGGTATCTGTTCTTATCACTCCAGTACTGAACATTGAAATCTTTTTACAAATGTTGTAAAACTGCTCATGTTTTCCATTTTTCTTTGGAGCAGTTGGAGCAGTGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTATTGGCAAACCAGACAACAGAATGATTTTGAAGGTACAATTTTCCTAGATTTTTAGGATACACATTCCATTTAGCATGTTTCAACCTCCGATCTCAGGGAGTAGTATATTTCAATTGCTCACTCTGGCTATTCGTTTTAGCATTTTTGAGGAACTCAAATCTTACTACTTGGCTGAGTTGTGGCTTAGCCAGCCAGAACAGTGGTCATATATTGTTTACAAATTAGATTCGCAGAATTATTTCATTCTTCATGTGACAAGAATACTCTTAGCTATTAATCCCGTATACAATTGTGTATAGATTAACAACAATGTACGCTTATGGTGGGAACTTTGCTATTTCTAACGTTTAAGTCTATATTGCTTTGAAGAATTCTTTACGCATGACTTGGTCCAATGCTCAAAGAGAAAGCTGCAAAGTTATGCCTTTCTAGATCAGGGTTTATGTATCAAAAACATTTTACAAGATAATCAAACTTTCAAAGATGCTGATGTGTTGATTGAAAACCTTCTCTGGAGTCCTAAAAAATGTTGAGATGCCGTCTTTAAACGGTAGATTTCTGAAGAAATCCTCTTCAGCGTTGTTGGCTTGCCCACAGAGGGGCTGAAAATGTTAGCTGTTACCCTGGTGTGCAAGCTTGAAATTTTCCTGATTTCATACCTTTGGAATGCCTTCGGTGGAAAGTCAAAGAAACTAGAATTGTGGAATCCAACTACATGAAGGCATTTTGTAGAAGTTGGATATATTGTATGGAAGAACTTTTGTCTTTCTAAAGGAGTTTGTTTTTACTCAAGTTATGTATAAGAAAAGAAAGGAGGTCACTCAACCAAAGTTACCTATAAAAAAAGAGGTCTTTCAACTCGACGTCAAGCTATTTTCTCTAAGTTACCAATTTAGTTTTTGTTCTTTTTTGGGAGTGGAGTAAGGAAGGGTCGATCATTTAGTAAGTTGGAACACTGTTTCGAGAAGCCTCAAGAAGACAGGATTGGAAACAGGCAATCTAACAGAAATAATGGCTACTTAATACATGGCTTTGGAGATATCCAAGAGTTAGCAACGCATTAAGGAATGAAGTGGTTACTAGCATTTATGGCAAGGAAGAACTGGTGGTTCACATAAGCAAGGAAATATGTTTTTGTTTTTGTTCTTTTTTTTAAAAGCCTATGGTGGAACATTACAAAATTACTTGGTCATATATTAACTTCTCAATAATAGAGTTGGGTAATGACGAAAGGACTTCCACTTGGGATCACATTTGAAAATCGCTTGCCATCTCGTGGCTTTCCTCAGTGTTTTCAACTGGCCTGGCACAACCTGAAATTGTTTATGCTCGGGACCAGTGGGAAGATAGTACCAAATGATGGAGAATTCTAGCAAGAAGGTAGAGGTGGAAAATGAGGGGTTTGGTTCAAATTCTGCATACTGTACGGCCTTATAGTTTGGAGGACAAAAGGAGTTGGGGATTACATCCTTTAGGCATATTCAGTAAAAGTCGCTGGGAGCTAACTGGATTGCCTTTTTCTACCTAATTCACAGATTAATCTGAGTCATTCGGGAAACACAATGCTCAAAGAAGCTAAAATTTCTACCCGGACCATTAAGTTGTGTAGTAACTATTGGCGATCAATTGCAACAGAATGCACTTACATGGTTCTGAATTGAAGCCATTATGGGTTATGTTTGGAAGATGGGGAGGATCAAGCAAGCTTTTTTTTTTTTTCATTGTTCCTCTGGCTCCTTCAAGCCACGCACATACACCCAAAATCTCATCTTCACTTGATATCCTCATTCCCTCTCATTCTGGAACTATGAGATGTTGCAAGTGTTTTTCAAACTTTTGTTATCTTCTCATTAATGTACATGTAATTTAGTAGCTTTTGGCTTTTTATTCAAGCTACTGTTCATTAACTTTTGAACAACTTATGCATTGATTATGGCATTGGAAACAGTATGTTGTTGTTCAATACTATCCTCGTAGGATTGGATCAACTCTTTATTAAATGTTAAATGCCACGTTTTTCAGCGGCTTCATACTACATGGAAAAAAAGATTTGGAGAAGACATCAACGAAGATCTTCTGTATATTGTTACTGTGGAGAGGGTACTTCAGATAGATGATTTTGGGGAGGTACAAACGTCATTTTCTGCACCTTTTTTTTTTGTGCAGTGTCTAATCACTAATCAGGAACCAGTTTCAATGCGCACTAGAATGTAGAAATGTAGAAATGTTCGTTCGAATATTAATAAAATATTTCATATGATTTCAGGTTGGTGTTTGGGTAAATTCTTCAGACTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTGTGCAGAAAAGCTAGTGGATGAGATAAACACAAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCTGATTTGAACTTACAGGTTAGCATTCAACCGCATTTTTCTATACGGTCGTCTTCAGCATCTTATTTGATAGGAGATTGGGTTTAACTTTTAGTTTATTTCTTCTCTAGCCAACTAACAGCACACTGAGCCTCCTTGCCCTTTTGTTTTTATTTTTCTGCATTTTTTTTTAATATAAACATCTGAAATGTTGTCATTCTACGAGGCTAGAATCTATAGTTGGAAACCACCCCTCATAGAACCAAAGTCATTTGTTCCGCCCTCCCCCTCTAATAGAGCTGACCCACTTCTTCGATCAAACTGCAGCACAGCAGCCTCTGATTCCCATAATTTTGTATCCCAAGACACAAGCTCTATATCAAATCTGTCACTCTTATAAGTTGATAACTTGTTATACAATATGAATACAAATCAGAACGTTGAAGTAAAACAAATCGACTTTTAAGTTGACTTGCTAAGTTTTGTCGAATATTTTCAATTATGAGGAATCTCAGAGACGAAGTCTCTCTTGGGTAAATGTTGAAATGATGGAATGTATGTTTAATCTACTGTGGGATAGAAGTTGGATTTGAACATTCCTTCATTTTTGAGGTGCAAAATGATTTTTATTATGTGTTAAAAACTTAAAATGATACATTTATTGACTCCTTTTGGTCTTTTTTTTACTCTCTTGTATATTCTTTCATTTCTTTAATGCATGCGTTATGTCTTATTATAAAAATTACCTGTATTTAAATATCATCTCAAATATCTCAAACATCATATAGCATAAGTTTTTATTTATTTATTATTATTGTTATTATTATTATTTTTTCTTTAAGAAAGAGGAATCTTCTTACAAAAACACCTTCCAATTCAAGTGAATGAGGAAAGTGGAGTAATTACACAAGGACTTGTGATGGCTACTCCAACTAGACGTTATAAACCGTTTAAGATCACAAAAATAAACAATAGAATTAGAGTATCTTTGAAAATTCTATCGTTTCTTTCTTTTCAAATCAGCCACAAAATAGCTTTAGCTTTGTTAGACCACAACACCTTCGCCTTTCCTTTTAAACCCCAAACGCTTCCACCAACTAATCTAAAAATGAGCCTCGGCTTACTCCAGCTCAAACCAAAGCTATTCCCGAAGAAATCCCAGACTTTGGAGCTGAGATTACAATGGAAGAGTAGCTTTGACAAAGACTTTTCACAGCCTTTGCCCAAAACACACATATTTGGGGAGATCATATGGCATAAGCTATCATGAAATCTACGATGAAAATACTTCATGCATTGTTTTGTTTAGCTGACATGTAGATTTAGCATGTGCCCAAATTTAGAAGGTTAAGATTGCTCATCATATTAAAACGCATAAGAACACTTGGATTCTATGGGCAGATGGCTCTTACAGTTACAGGCCAGTACATTCTAACCGTTCTCTATTTTGCTTGACAGTTTACAGAAGCAAAACTGATATGGGTAGATCGGTTAGGCTTCGACGTGCGCGTATTCTCTCCTCAGAATGGGACATTTGAAATCCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAAGGTGCGAAGTCGACATTTAACGGCATGTCCCAACAGGCCTGGGAGGTGGAAAGGAATTTCCAGGCTCCAGATTTTGAGAGGGTGAAGCAATTCAAGATGATAAAACCATTGCATAGTGTAGAGTAG ATGCATCTTCAAGCTCAAACTCTCACCAATCAGTTCGCGCCTTCTGTTGTTCCTTTAAAATCAACCTCGAAATCTCGATTCCCTCATCCAAACGCATGCCGATTCCGTAGAGTTTCGTATCGGGCTCTGAAATGTTCTGTTGCGACGATTTCCGAGTCGGCCTCCACGGAACTGCGGAATGTGAAACCGTTTCCGGCCGAGGTTTCGAGGACGATCATGGAGCTGTCTTCTGTTGGAACACTTTCCTCTTTGAGCCAAGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGATGGTACGCCTCTTTTGAGCTTGAATGAATATTTGCCGGAGTCTATCGACAGGAGGTCCAGCCTCCACGTTCAGCAGTTGGAGCAGTGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTATTGGCAAACCAGACAACAGAATGATTTTGAAGCGGCTTCATACTACATGGAAAAAAAGATTTGGAGAAGACATCAACGAAGATCTTCTGTATATTGTTACTGTGGAGAGGGTACTTCAGATAGATGATTTTGGGGAGGTTGGTGTTTGGGTAAATTCTTCAGACTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTGTGCAGAAAAGCTAGTGGATGAGATAAACACAAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCTGATTTGAACTTACAGTTTACAGAAGCAAAACTGATATGGGTAGATCGGTTAGGCTTCGACGTGCGCGTATTCTCTCCTCAGAATGGGACATTTGAAATCCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAAGGTGCGAAGTCGACATTTAACGGCATGTCCCAACAGGCCTGGGAGGTGGAAAGGAATTTCCAGGCTCCAGATTTTGAGAGGGTGAAGCAATTCAAGATGATAAAACCATTGCATAGTGTAGAGTAG ATGCATCTTCAAGCTCAAACTCTCACCAATCAGTTCGCGCCTTCTGTTGTTCCTTTAAAATCAACCTCGAAATCTCGATTCCCTCATCCAAACGCATGCCGATTCCGTAGAGTTTCGTATCGGGCTCTGAAATGTTCTGTTGCGACGATTTCCGAGTCGGCCTCCACGGAACTGCGGAATGTGAAACCGTTTCCGGCCGAGGTTTCGAGGACGATCATGGAGCTGTCTTCTGTTGGAACACTTTCCTCTTTGAGCCAAGAGGGATGGCCTCTCGGCGTTGGCGTTCGATTCGCTGTTGACCAAGATGGTACGCCTCTTTTGAGCTTGAATGAATATTTGCCGGAGTCTATCGACAGGAGGTCCAGCCTCCACGTTCAGCAGTTGGAGCAGTGTGGATTGCGGACTCCTCAGTGTACAATTCAAGGAAGTATTGGCAAACCAGACAACAGAATGATTTTGAAGCGGCTTCATACTACATGGAAAAAAAGATTTGGAGAAGACATCAACGAAGATCTTCTGTATATTGTTACTGTGGAGAGGGTACTTCAGATAGATGATTTTGGGGAGGTTGGTGTTTGGGTAAATTCTTCAGACTATAAAACTGCAAGCCCAGATCCTCTTCGAAATTGTGCAGAAAAGCTAGTGGATGAGATAAACACAAACAATGCCGAAGATGTTAATCGCTTTTGCAACATATATGCTGATTTGAACTTACAGTTTACAGAAGCAAAACTGATATGGGTAGATCGGTTAGGCTTCGACGTGCGCGTATTCTCTCCTCAGAATGGGACATTTGAAATCCGAATTCCGTTTCCGAGAGAAGTTACAGATGAGAAAGGTGCGAAGTCGACATTTAACGGCATGTCCCAACAGGCCTGGGAGGTGGAAAGGAATTTCCAGGCTCCAGATTTTGAGAGGGTGAAGCAATTCAAGATGATAAAACCATTGCATAGTGTAGAGTAG MHLQAQTLTNQFAPSVVPLKSTSKSRFPHPNACRFRRVSYRALKCSVATISESASTELRNVKPFPAEVSRTIMELSSVGTLSSLSQEGWPLGVGVRFAVDQDGTPLLSLNEYLPESIDRRSSLHVQQLEQCGLRTPQCTIQGSIGKPDNRMILKRLHTTWKKRFGEDINEDLLYIVTVERVLQIDDFGEVGVWVNSSDYKTASPDPLRNCAEKLVDEINTNNAEDVNRFCNIYADLNLQFTEAKLIWVDRLGFDVRVFSPQNGTFEIRIPFPREVTDEKGAKSTFNGMSQQAWEVERNFQAPDFERVKQFKMIKPLHSVE Homology
BLAST of HG10012927 vs. NCBI nr
Match: XP_038874967.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 609.4 bits (1570), Expect = 1.8e-170 Identity = 304/320 (95.00%), Postives = 308/320 (96.25%), Query Frame = 0
BLAST of HG10012927 vs. NCBI nr
Match: KAA0049136.1 (glutamyl-tRNA reductase-binding protein [Cucumis melo var. makuwa]) HSP 1 Score: 598.6 bits (1542), Expect = 3.2e-167 Identity = 296/317 (93.38%), Postives = 303/317 (95.58%), Query Frame = 0
BLAST of HG10012927 vs. NCBI nr
Match: XP_004133983.1 (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 [Cucumis sativus] >KAE8650294.1 hypothetical protein Csa_009855 [Cucumis sativus]) HSP 1 Score: 593.2 bits (1528), Expect = 1.3e-165 Identity = 296/321 (92.21%), Postives = 303/321 (94.39%), Query Frame = 0
BLAST of HG10012927 vs. NCBI nr
Match: XP_008438328.1 (PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 [Cucumis melo] >TYK17425.1 glutamyl-tRNA reductase-binding protein [Cucumis melo var. makuwa]) HSP 1 Score: 592.0 bits (1525), Expect = 3.0e-165 Identity = 295/317 (93.06%), Postives = 302/317 (95.27%), Query Frame = 0
BLAST of HG10012927 vs. NCBI nr
Match: XP_022974735.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita maxima]) HSP 1 Score: 571.6 bits (1472), Expect = 4.2e-159 Identity = 284/321 (88.47%), Postives = 302/321 (94.08%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy Swiss-Prot
Match: Q9LU39 (Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLUTRBP PE=1 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98 Identity = 183/313 (58.47%), Postives = 236/313 (75.40%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy TrEMBL
Match: A0A5A7U4E8 (Glutamyl-tRNA reductase-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003680 PE=4 SV=1) HSP 1 Score: 598.6 bits (1542), Expect = 1.5e-167 Identity = 296/317 (93.38%), Postives = 303/317 (95.58%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy TrEMBL
Match: A0A5D3D123 (Glutamyl-tRNA reductase-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002890 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165 Identity = 295/317 (93.06%), Postives = 302/317 (95.27%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy TrEMBL
Match: A0A1S3AWR1 (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483466 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165 Identity = 295/317 (93.06%), Postives = 302/317 (95.27%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy TrEMBL
Match: A0A6J1IER0 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473469 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 2.0e-159 Identity = 284/321 (88.47%), Postives = 302/321 (94.08%), Query Frame = 0
BLAST of HG10012927 vs. ExPASy TrEMBL
Match: A0A6J1D098 (glutamyl-tRNA reductase-binding protein, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016100 PE=4 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 1.3e-158 Identity = 284/321 (88.47%), Postives = 298/321 (92.83%), Query Frame = 0
BLAST of HG10012927 vs. TAIR 10
Match: AT3G21200.1 (proton gradient regulation 7 ) HSP 1 Score: 361.3 bits (926), Expect = 8.0e-100 Identity = 183/313 (58.47%), Postives = 236/313 (75.40%), Query Frame = 0
BLAST of HG10012927 vs. TAIR 10
Match: AT3G03890.1 (FMN binding ) HSP 1 Score: 77.0 bits (188), Expect = 3.0e-14 Identity = 71/300 (23.67%), Postives = 127/300 (42.33%), Query Frame = 0
BLAST of HG10012927 vs. TAIR 10
Match: AT3G03890.2 (FMN binding ) HSP 1 Score: 72.8 bits (177), Expect = 5.7e-13 Identity = 67/287 (23.34%), Postives = 122/287 (42.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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