HG10012753 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012753
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ureidoglycolate hydrolase
Location	Chr01: 24008301 .. 24008736 (-)
RNA-Seq Expression	HG10012753
Synteny	HG10012753

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTTTGCTGCAATTCATCGCCCTCCTGCTTCCCTTCATCTTCGTCTCCTCTTTTTCCACAGCCTTAGCTCACAATCATGAGGACCCAACAATCAGAACCATGGAGGCTTTCTCCGGGTACCCAGTTCACGAACCTCCCTCCTCTGTCTTCTCAAACCCCATTACTTCTCTGTCCGTTGATGCTGATATCTTAGTGAAACAGGTACGGAAGTCAAATGGATTTCAATCCTACAGGGTTTTAATCGGTTTTAATTATAAGTTAACTTAGTGAGTCCATTTGAAGGGTTCTCATTACTTGTTTTGCGGATTTGGGTATTTAGATTGAGGAGCTTTCTACTTTCTCGGATTCACCAGCCCCATCGGTTACCAGGGTTCTTTACACTGAGAAGGATGTATTGGCACGAAGGCACGGACTCTGTCTATTCAGCTAA

mRNA sequence

ATGCTTCCTTTGCTGCAATTCATCGCCCTCCTGCTTCCCTTCATCTTCGTCTCCTCTTTTTCCACAGCCTTAGCTCACAATCATGAGGACCCAACAATCAGAACCATGGAGGCTTTCTCCGGGTACCCAGTTCACGAACCTCCCTCCTCTGTCTTCTCAAACCCCATTACTTCTCTGTCCGTTGATGCTGATATCTTAGTGAAACAGATTGAGGAGCTTTCTACTTTCTCGGATTCACCAGCCCCATCGGTTACCAGGGTTCTTTACACTGAGAAGGATGTATTGGCACGAAGGCACGGACTCTGTCTATTCAGCTAA

Coding sequence (CDS)

ATGCTTCCTTTGCTGCAATTCATCGCCCTCCTGCTTCCCTTCATCTTCGTCTCCTCTTTTTCCACAGCCTTAGCTCACAATCATGAGGACCCAACAATCAGAACCATGGAGGCTTTCTCCGGGTACCCAGTTCACGAACCTCCCTCCTCTGTCTTCTCAAACCCCATTACTTCTCTGTCCGTTGATGCTGATATCTTAGTGAAACAGATTGAGGAGCTTTCTACTTTCTCGGATTCACCAGCCCCATCGGTTACCAGGGTTCTTTACACTGAGAAGGATGTATTGGCACGAAGGCACGGACTCTGTCTATTCAGCTAA

Protein sequence

MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLSVDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARRHGLCLFS

Homology

[Close]

BLAST of HG10012753 vs. NCBI nr
Match: XP_008438571.1 (PREDICTED: ureidoglycolate hydrolase [Cucumis melo] >TYK17262.1 ureidoglycolate hydrolase [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ IALLLPFIF+SSFS ALAHNH+DP IRTMEAFSGYPVHEP    FSNPITSLS
Sbjct: 1  MLPLLQLIALLLPFIFISSFSAALAHNHDDPAIRTMEAFSGYPVHEPSPHGFSNPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. NCBI nr
Match: KAA0049296.1 (ureidoglycolate hydrolase [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ IALLLPFIF+SSFS ALAHNH+DP IRTMEAFSGYPVHEP    FSNPITSLS
Sbjct: 1  MLPLLQLIALLLPFIFISSFSAALAHNHDDPAIRTMEAFSGYPVHEPSPHGFSNPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. NCBI nr
Match: XP_004134092.1 (ureidoglycolate hydrolase [Cucumis sativus] >KGN56906.1 hypothetical protein Csa_010154 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 7.8e-38
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ +ALLL FIF+SSFS ALAHNH+DPTIRTMEAFSGYPVHEP S  FS PITSLS
Sbjct: 1  MLPLLQLVALLLHFIFISSFSAALAHNHDDPTIRTMEAFSGYPVHEPSSHGFSTPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. NCBI nr
Match: XP_038877185.1 (ureidoglycolate hydrolase isoform X1 [Benincasa hispida])

HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPL QFIALLL FIFVSSFS ALA NHEDPTIRTMEAFSGYPVH P S VFSNPI+SLS
Sbjct: 1  MLPLQQFIALLLLFIFVSSFSAALAQNHEDPTIRTMEAFSGYPVHHPSSYVFSNPISSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VD+D LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDSDTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. NCBI nr
Match: XP_022147423.1 (ureidoglycolate hydrolase [Momordica charantia])

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLL+F+ALLL FIF SSF +ALA N+EDPTI+TMEAFSGYPVHEP S   SNP+TSLS
Sbjct: 1  MLPLLRFLALLLHFIFFSSFPSALAENYEDPTIKTMEAFSGYPVHEPSSFGVSNPVTSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLAR 98
          VDA+ LVKQIEELSTFSDSPAPSVTR+LYTEKDVLAR
Sbjct: 61 VDAENLVKQIEELSTFSDSPAPSVTRILYTEKDVLAR 97

[Close]

BLAST of HG10012753 vs. ExPASy Swiss-Prot
Match: Q8VXY9 (Ureidoglycolate hydrolase OS=Arabidopsis thaliana OX=3702 GN=UAH PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.5e-18
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 5   LQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLSVDAD 64
           L  I+LLLP        ++LA   +  +IRTME FSGYP+HEP      N  +SLSVDA 
Sbjct: 13  LLLISLLLP--------SSLAQQQQHESIRTMEDFSGYPIHEPGQFGSINLASSLSVDAP 72

Query: 65  ILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARRH 100
            L  QI+ELS+FSD+P+PSVTRVLYT+KDV ARR+
Sbjct: 73  GLQNQIDELSSFSDAPSPSVTRVLYTDKDVSARRY 99

[Close]

BLAST of HG10012753 vs. ExPASy Swiss-Prot
Match: Q2QMN7 (Ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=UAH PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-10
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 34  RTMEAFSGYPV--HEPPSSVFSNPITSLSVDADILVKQIEELSTFSDSPAPSVTRVLYTE 93
           RTME F+G+P   +       S   +   VD+D L +QI+EL++FSDSP PSVTRVLY++
Sbjct: 42  RTMEEFAGFPASDYRGDGGGGSGGSSPFYVDSDGLQRQIDELASFSDSPVPSVTRVLYSD 101

Query: 94  KDVLARRH 100
           KDV ARR+
Sbjct: 102 KDVQARRY 109

[Close]

BLAST of HG10012753 vs. ExPASy TrEMBL
Match: A0A5D3D0C3 (Ureidoglycolate hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001150 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.6e-39
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ IALLLPFIF+SSFS ALAHNH+DP IRTMEAFSGYPVHEP    FSNPITSLS
Sbjct: 1  MLPLLQLIALLLPFIFISSFSAALAHNHDDPAIRTMEAFSGYPVHEPSPHGFSNPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. ExPASy TrEMBL
Match: A0A5A7U4V0 (Ureidoglycolate hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005370 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.6e-39
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ IALLLPFIF+SSFS ALAHNH+DP IRTMEAFSGYPVHEP    FSNPITSLS
Sbjct: 1  MLPLLQLIALLLPFIFISSFSAALAHNHDDPAIRTMEAFSGYPVHEPSPHGFSNPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. ExPASy TrEMBL
Match: A0A1S3AWT8 (ureidoglycolate hydrolase OS=Cucumis melo OX=3656 GN=LOC103483639 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.6e-39
Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ IALLLPFIF+SSFS ALAHNH+DP IRTMEAFSGYPVHEP    FSNPITSLS
Sbjct: 1  MLPLLQLIALLLPFIFISSFSAALAHNHDDPAIRTMEAFSGYPVHEPSPHGFSNPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. ExPASy TrEMBL
Match: A0A0A0LA05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142980 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.8e-38
Identity = 86/98 (87.76%), Postives = 90/98 (91.84%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLLQ +ALLL FIF+SSFS ALAHNH+DPTIRTMEAFSGYPVHEP S  FS PITSLS
Sbjct: 1  MLPLLQLVALLLHFIFISSFSAALAHNHDDPTIRTMEAFSGYPVHEPSSHGFSTPITSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARR 99
          VDAD LVKQIEELSTFSDSPAPSVTR+LYTEKDVLARR
Sbjct: 61 VDADTLVKQIEELSTFSDSPAPSVTRILYTEKDVLARR 98

[Close]

BLAST of HG10012753 vs. ExPASy TrEMBL
Match: A0A6J1D1A0 (ureidoglycolate hydrolase OS=Momordica charantia OX=3673 GN=LOC111016352 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MLPLLQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLS 60
          MLPLL+F+ALLL FIF SSF +ALA N+EDPTI+TMEAFSGYPVHEP S   SNP+TSLS
Sbjct: 1  MLPLLRFLALLLHFIFFSSFPSALAENYEDPTIKTMEAFSGYPVHEPSSFGVSNPVTSLS 60

Query: 61 VDADILVKQIEELSTFSDSPAPSVTRVLYTEKDVLAR 98
          VDA+ LVKQIEELSTFSDSPAPSVTR+LYTEKDVLAR
Sbjct: 61 VDAENLVKQIEELSTFSDSPAPSVTRILYTEKDVLAR 97

[Close]

BLAST of HG10012753 vs. TAIR 10
Match: AT5G43600.1 (ureidoglycolate amidohydrolase )

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 5   LQFIALLLPFIFVSSFSTALAHNHEDPTIRTMEAFSGYPVHEPPSSVFSNPITSLSVDAD 64
           L  I+LLLP        ++LA   +  +IRTME FSGYP+HEP      N  +SLSVDA 
Sbjct: 13  LLLISLLLP--------SSLAQQQQHESIRTMEDFSGYPIHEPGQFGSINLASSLSVDAP 72

Query: 65  ILVKQIEELSTFSDSPAPSVTRVLYTEKDVLARRH 100
            L  QI+ELS+FSD+P+PSVTRVLYT+KDV ARR+
Sbjct: 73  GLQNQIDELSSFSDAPSPSVTRVLYTDKDVSARRY 99

The following BLAST results are available for this feature:

BLAST of HG10012753 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438571.1	1.6e-38	88.78	PREDICTED: ureidoglycolate hydrolase [Cucumis melo] >TYK17262.1 ureidoglycolate ...	[more]
KAA0049296.1	1.6e-38	88.78	ureidoglycolate hydrolase [Cucumis melo var. makuwa]	[more]
XP_004134092.1	7.8e-38	87.76	ureidoglycolate hydrolase [Cucumis sativus] >KGN56906.1 hypothetical protein Csa...	[more]
XP_038877185.1	2.3e-37	88.78	ureidoglycolate hydrolase isoform X1 [Benincasa hispida]	[more]
XP_022147423.1	1.2e-33	82.47	ureidoglycolate hydrolase [Momordica charantia]	[more]

BLAST of HG10012753 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VXY9	2.5e-18	55.79	Ureidoglycolate hydrolase OS=Arabidopsis thaliana OX=3702 GN=UAH PE=1 SV=1	[more]
Q2QMN7	4.2e-10	51.47	Ureidoglycolate hydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=UAH PE=1 S...	[more]

BLAST of HG10012753 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0C3	7.6e-39	88.78	Ureidoglycolate hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7U4V0	7.6e-39	88.78	Ureidoglycolate hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3AWT8	7.6e-39	88.78	ureidoglycolate hydrolase OS=Cucumis melo OX=3656 GN=LOC103483639 PE=4 SV=1	[more]
A0A0A0LA05	3.8e-38	87.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142980 PE=4 SV=1	[more]
A0A6J1D1A0	5.6e-34	82.47	ureidoglycolate hydrolase OS=Momordica charantia OX=3673 GN=LOC111016352 PE=4 SV...	[more]

BLAST of HG10012753 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43600.1	1.7e-19	55.79	ureidoglycolate amidohydrolase	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012753.1	HG10012753.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000256	allantoin catabolic process
biological_process	GO:0006145	purine nucleobase catabolic process
biological_process	GO:0010136	ureide catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0004848	ureidoglycolate hydrolase activity