HG10012740 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012740
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Auxin-responsive protein
Location	Chr01: 23915135 .. 23916064 (-)
RNA-Seq Expression	HG10012740
Synteny	HG10012740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTGAAAATGGGTTAAACCTCGATGCGACGGAGCTCCGCCTTGGACCGCCCGGCGTCGACGACAATAAATTACAAGAACAACCTCAGTCTCTCAGAATTATCAGCAACAACAACAACAAAAGACCATTATTATTACCAGAATCTAACCAAAGCTCCTCTGGATCAAATATCACCGTTTCCTCTGATGCCACTCTTGAAACCCCACCTCCTTCCAAGTATGTTTAACAAAAAATTACAATTTTTTTTTTATTTACTTGTAATTATTAATAATTAATTAGATTATTGGTTATTAATTTTATCATTTTGGGTATGTGATGTAGGGCTCAGATTGTGGGATGGCCACCGGTTCAGTCATTTAGAAGGAACAGCCTTCAAGGGAAGAAGACGACGGCGGCAACGGCGGTGCCGGAGATTAGTGGAAATTATGTAAAAGTAAGCATGGATGGAGCTCCTTACTTGAGAAAAATTGATGTCAGTTTATACAAAGGCTACCCTGAACTTCTCCAAACTTTAGAAGACATGTTCAAATTCACCGTAGGTATGTATTATATTTTTAAGTAATTTTCCAACATAAAGTTAAAAAAAAAAAAAAATTTACATCAAATTTTGATTGAGATAATTATTAAATATATATTTTTTTTGGTCTTTAGGTGAATACTCCGAGAGAGAAGGGTATAAAGGATCTGAATATGTTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTCCATGGGAGTAAGTTCTTCTTCTTTATTAATTTTTGGAAATTTGTTTAAAGATTTAATTTTTGTTTGAAATTGATCTGACATTTCATATGGGTTTTTGATTTACAGAATGTTTATGTCGTCTTGCAAACGTTTGAGAATCATGAAAGGATCCGAAGCAAAGGGATTAGGATGTGTTGCCTGA

mRNA sequence

ATGGCGTTTGAAAATGGGTTAAACCTCGATGCGACGGAGCTCCGCCTTGGACCGCCCGGCGTCGACGACAATAAATTACAAGAACAACCTCAGTCTCTCAGAATTATCAGCAACAACAACAACAAAAGACCATTATTATTACCAGAATCTAACCAAAGCTCCTCTGGATCAAATATCACCGTTTCCTCTGATGCCACTCTTGAAACCCCACCTCCTTCCAAGGCTCAGATTGTGGGATGGCCACCGGTTCAGTCATTTAGAAGGAACAGCCTTCAAGGGAAGAAGACGACGGCGGCAACGGCGGTGCCGGAGATTAGTGGAAATTATGTAAAAGTAAGCATGGATGGAGCTCCTTACTTGAGAAAAATTGATGTCAGTTTATACAAAGGCTACCCTGAACTTCTCCAAACTTTAGAAGACATGTTCAAATTCACCGTAGGTGAATACTCCGAGAGAGAAGGGTATAAAGGATCTGAATATGTTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTCCATGGGAAATGTTTATGTCGTCTTGCAAACGTTTGAGAATCATGAAAGGATCCGAAGCAAAGGGATTAGGATGTGTTGCCTGA

Coding sequence (CDS)

ATGGCGTTTGAAAATGGGTTAAACCTCGATGCGACGGAGCTCCGCCTTGGACCGCCCGGCGTCGACGACAATAAATTACAAGAACAACCTCAGTCTCTCAGAATTATCAGCAACAACAACAACAAAAGACCATTATTATTACCAGAATCTAACCAAAGCTCCTCTGGATCAAATATCACCGTTTCCTCTGATGCCACTCTTGAAACCCCACCTCCTTCCAAGGCTCAGATTGTGGGATGGCCACCGGTTCAGTCATTTAGAAGGAACAGCCTTCAAGGGAAGAAGACGACGGCGGCAACGGCGGTGCCGGAGATTAGTGGAAATTATGTAAAAGTAAGCATGGATGGAGCTCCTTACTTGAGAAAAATTGATGTCAGTTTATACAAAGGCTACCCTGAACTTCTCCAAACTTTAGAAGACATGTTCAAATTCACCGTAGGTGAATACTCCGAGAGAGAAGGGTATAAAGGATCTGAATATGTTCCAACTTATGAAGATAAAGATGGTGATTGGATGCTGGTCGGAGATGTTCCATGGGAAATGTTTATGTCGTCTTGCAAACGTTTGAGAATCATGAAAGGATCCGAAGCAAAGGGATTAGGATGTGTTGCCTGA

Protein sequence

MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGLGCVA

Homology

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BLAST of HG10012740 vs. NCBI nr
Match: XP_038877087.1 (auxin-responsive protein IAA4-like [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 191/204 (93.63%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           MAFE GLNLDATELRLGPPGVDD+K QEQPQSLR I+ NNNKR LLLPESNQSSSGSNIT
Sbjct: 1   MAFETGLNLDATELRLGPPGVDDSKSQEQPQSLRSIT-NNNKRSLLLPESNQSSSGSNIT 60

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYL 120
           VSSD+TLETPPPSKAQIVGWPPVQSFRRN LQGKKT A TA PE SGNYVKVSMDGAPYL
Sbjct: 61  VSSDSTLETPPPSKAQIVGWPPVQSFRRNILQGKKTAAVTAAPESSGNYVKVSMDGAPYL 120

Query: 121 RKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWE 180
           RKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWE
Sbjct: 121 RKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWE 180

Query: 181 MFMSSCKRLRIMKGSEAKGLGCVA 205
           MFMSSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 MFMSSCKRLRIMKGSEAKGLGCVA 203

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BLAST of HG10012740 vs. NCBI nr
Match: XP_008438589.1 (PREDICTED: auxin-responsive protein IAA4-like [Cucumis melo] >KAA0049307.1 auxin-responsive protein IAA4-like [Cucumis melo var. makuwa] >TYK17251.1 auxin-responsive protein IAA4-like [Cucumis melo var. makuwa])

HSP 1 Score: 374.0 bits (959), Expect = 8.2e-100
Identity = 188/206 (91.26%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           MAFENGLNLDATELRLGPPGVDDNKLQEQPQS+RI     NKRPLLLPESNQSSSGSN++
Sbjct: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSIRI-----NKRPLLLPESNQSSSGSNVS 60

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTT--AATAVPEISGNYVKVSMDGAP 120
           VSSDATL+TPPPSKAQIVGWPPVQSFRRNSLQGKKTT  A TA  E SGN+VKVSMDGAP
Sbjct: 61  VSSDATLDTPPPSKAQIVGWPPVQSFRRNSLQGKKTTVAATTAALESSGNFVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+SLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 205
           WEMF SSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 WEMFTSSCKRLRIMKGSEAKGLGCVA 201

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BLAST of HG10012740 vs. NCBI nr
Match: XP_004134103.1 (auxin-responsive protein IAA4 [Cucumis sativus] >KGN56917.1 hypothetical protein Csa_009567 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-96
Identity = 184/209 (88.04%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQ--PQSLRIISNNNNKRPLLLPESNQSSSGSN 60
           MAF+NGLNLDATELRLGPPG+D+NKLQ+Q  PQS+RI     NKRPLLLPESNQSSSGSN
Sbjct: 1   MAFQNGLNLDATELRLGPPGLDENKLQDQQLPQSIRI-----NKRPLLLPESNQSSSGSN 60

Query: 61  ITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTT---AATAVPEISGNYVKVSMD 120
           I+VSSDATL+TPPPSKAQIVGWPPVQSFRRNSLQGKKTT   A TA  E SGN+VKVSMD
Sbjct: 61  ISVSSDATLDTPPPSKAQIVGWPPVQSFRRNSLQGKKTTTVAATTAAQESSGNFVKVSMD 120

Query: 121 GAPYLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180
           GAPYLRKID+SLYKGYP LLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG
Sbjct: 121 GAPYLRKIDLSLYKGYPVLLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180

Query: 181 DVPWEMFMSSCKRLRIMKGSEAKGLGCVA 205
           DVPWEMF SSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 DVPWEMFTSSCKRLRIMKGSEAKGLGCVA 204

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BLAST of HG10012740 vs. NCBI nr
Match: XP_022980785.1 (auxin-responsive protein IAA4-like [Cucurbita maxima])

HSP 1 Score: 354.4 bits (908), Expect = 6.7e-94
Identity = 181/206 (87.86%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDD--NKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSN 60
           MAF+N LNLDATELRLGPPG DD  N  QEQPQSLRII   NNKRP LLPESNQSSS SN
Sbjct: 1   MAFQNCLNLDATELRLGPPGADDDNNNNQEQPQSLRII---NNKRP-LLPESNQSSSASN 60

Query: 61  ITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAP 120
           I+VSSDATL+TPPP+KAQIVGWPPVQSFRRNSLQ KKT  ATA  E SGNYVKVSMDGAP
Sbjct: 61  ISVSSDATLQTPPPTKAQIVGWPPVQSFRRNSLQSKKTAVATAAQESSGNYVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+ LYKGYPELLQTL+DMFKF VGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLCLYKGYPELLQTLQDMFKFRVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 205
           WEMFMSSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 202

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BLAST of HG10012740 vs. NCBI nr
Match: XP_023527189.1 (auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 5.7e-93
Identity = 179/209 (85.65%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDD-----NKLQEQPQSLRIISNNNNKRPLLLPESNQSSS 60
           MAF+N LNLDATELRLGPPG DD     N  QEQPQSLRII   NNKRP LLPESNQSSS
Sbjct: 1   MAFQNCLNLDATELRLGPPGADDDDNNNNNSQEQPQSLRII---NNKRP-LLPESNQSSS 60

Query: 61  GSNITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMD 120
            SNI+VSSD+TL+TPPP+KAQIVGWPPVQSFRRN+LQ KKT  ATA  E SGNYVKVSMD
Sbjct: 61  ASNISVSSDSTLQTPPPTKAQIVGWPPVQSFRRNTLQSKKTAVATAAQESSGNYVKVSMD 120

Query: 121 GAPYLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180
           GAPYLRKID+ LYKGYPELLQTL+DMFKF VGEYSEREGYKGSEYVPTYEDKDGDWMLVG
Sbjct: 121 GAPYLRKIDLCLYKGYPELLQTLQDMFKFRVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180

Query: 181 DVPWEMFMSSCKRLRIMKGSEAKGLGCVA 205
           DVPWEMFMSSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 DVPWEMFMSSCKRLRIMKGSEAKGLGCVA 205

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BLAST of HG10012740 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 5.9e-61
Identity = 120/200 (60.00%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 3   FENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITVS 62
           ++  +NL ATELRLG PG ++           +    +NKR  +LPE+ +        + 
Sbjct: 7   YDELVNLKATELRLGLPGTEET----------VSCGKSNKR--VLPEATEKE------IE 66

Query: 63  SDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYLRK 122
           S    ET  P KAQIVGWPPV+S+R+N++Q KK+ +     E  GNYVKVSMDGAPYLRK
Sbjct: 67  STGKTETASPPKAQIVGWPPVRSYRKNNVQTKKSES-----EGQGNYVKVSMDGAPYLRK 126

Query: 123 IDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWEMF 182
           ID+++YK YPEL+++LE+MFKF+VGEY EREGYKGS++VPTYEDKDGDWMLVGDVPWEMF
Sbjct: 127 IDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMF 183

Query: 183 MSSCKRLRIMKGSEAKGLGC 203
           +SSCKRLRIMKGSE KGLGC
Sbjct: 187 VSSCKRLRIMKGSEVKGLGC 183

[Close]

BLAST of HG10012740 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-60
Identity = 120/206 (58.25%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 2   AFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPE----SNQSSSGS 61
           ++E  LNL ATELRLG PG D+ + +++P S  ++ ++N +    L E    SN +S  S
Sbjct: 3   SYETELNLRATELRLGLPGSDEPQ-EKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSS 62

Query: 62  NITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGA 121
           + T +SD   ++  P+K Q+VGWPP++SFR+NSLQ KK          +G Y+KVSM GA
Sbjct: 63  DSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDG----TGMYLKVSMAGA 122

Query: 122 PYLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDV 181
           PYLRKID+ +YK YPELL+ L+++FK T GEYSEREGY GSEY PTYEDKDGDWMLVGDV
Sbjct: 123 PYLRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDV 182

Query: 182 PWEMFMSSCKRLRIMKGSEAKGLGCV 204
           PW MF+SSCKRLRI+KGSEAKGLGC+
Sbjct: 183 PWNMFVSSCKRLRIIKGSEAKGLGCL 203

[Close]

BLAST of HG10012740 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.0e-60
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0


Query: 7   LNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITVSSDAT 66
           +NL  TELRLG PG D+    ++  S     NNNNKR L      +  S S  T      
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVS---CCNNNNKRVLSTDTEKEIESSSRKT------ 64

Query: 67  LETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYLRKIDVS 126
            ET PP KAQIVGWPPV+S+R+N++Q KK  +     E  G YVKVSMDGAPYLRKID+S
Sbjct: 65  -ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESE---HEGQGIYVKVSMDGAPYLRKIDLS 124

Query: 127 LYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWEMFMSSC 186
            YKGY ELL+ LE MFKF+VGEY ER+GYKGS++VPTYEDKDGDWML+GDVPWEMF+ +C
Sbjct: 125 CYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTC 184

Query: 187 KRLRIMKGSEAKGLGC 203
           KRLRIMKGSEAKGLGC
Sbjct: 185 KRLRIMKGSEAKGLGC 187

[Close]

BLAST of HG10012740 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-59
Identity = 122/203 (60.10%), Postives = 147/203 (72.41%), Query Frame = 0


Query: 2   AFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITV 61
           ++E  LNL ATELRLG PG D+ + +   +S        NKR      S ++S   +I+ 
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRATARS--------NKR-----SSPEASDEESISN 66

Query: 62  SSDATLE--TPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPY 121
            SD T E    PP+KAQ+VGWPP++S+R+N++Q KK   +    E +G YVKVSM GAPY
Sbjct: 67  GSDVTKEDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEES----EGNGMYVKVSMAGAPY 126

Query: 122 LRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPW 181
           LRKID+ +YK YPELL+ LE+MFK   GEYSEREGY GSEY PTYEDKDGDWMLVGDVPW
Sbjct: 127 LRKIDLKVYKSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPW 186

Query: 182 EMFMSSCKRLRIMKGSEAKGLGC 203
            MF+SSCKRLRIMKGSEAKGLGC
Sbjct: 187 NMFVSSCKRLRIMKGSEAKGLGC 192

[Close]

BLAST of HG10012740 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.7e-58
Identity = 115/203 (56.65%), Postives = 145/203 (71.43%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           + FE+ LNL ATELRLG PG ++   ++       +  NN ++     + + S S ++  
Sbjct: 5   VVFESDLNLKATELRLGLPGTEEK--EDNNLRTHAVLRNNKRQVRETSQDSVSISKASHH 64

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYL 120
                T+  PPP KA+IVGWPP++S+R+NS+Q           E  G +VKVSMDGAPYL
Sbjct: 65  QQHVETVSAPPP-KAKIVGWPPIRSYRKNSVQ---------EGEGDGIFVKVSMDGAPYL 124

Query: 121 RKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWE 180
           RK+D+ +Y GYPELL+ LE MFK  +GEYSEREGYKGSEY PTYEDKDGDWMLVGDVPW+
Sbjct: 125 RKVDLKVYGGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWD 184

Query: 181 MFMSSCKRLRIMKGSEAKGLGCV 204
           MF++SCKRLRIMKGSEA+GLGCV
Sbjct: 185 MFVTSCKRLRIMKGSEARGLGCV 195

[Close]

BLAST of HG10012740 vs. ExPASy TrEMBL
Match: A0A5A7U4N6 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001020 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 188/206 (91.26%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           MAFENGLNLDATELRLGPPGVDDNKLQEQPQS+RI     NKRPLLLPESNQSSSGSN++
Sbjct: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSIRI-----NKRPLLLPESNQSSSGSNVS 60

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTT--AATAVPEISGNYVKVSMDGAP 120
           VSSDATL+TPPPSKAQIVGWPPVQSFRRNSLQGKKTT  A TA  E SGN+VKVSMDGAP
Sbjct: 61  VSSDATLDTPPPSKAQIVGWPPVQSFRRNSLQGKKTTVAATTAALESSGNFVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+SLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 205
           WEMF SSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 WEMFTSSCKRLRIMKGSEAKGLGCVA 201

[Close]

BLAST of HG10012740 vs. ExPASy TrEMBL
Match: A0A1S3AXE9 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483650 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.0e-100
Identity = 188/206 (91.26%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           MAFENGLNLDATELRLGPPGVDDNKLQEQPQS+RI     NKRPLLLPESNQSSSGSN++
Sbjct: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSIRI-----NKRPLLLPESNQSSSGSNVS 60

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTT--AATAVPEISGNYVKVSMDGAP 120
           VSSDATL+TPPPSKAQIVGWPPVQSFRRNSLQGKKTT  A TA  E SGN+VKVSMDGAP
Sbjct: 61  VSSDATLDTPPPSKAQIVGWPPVQSFRRNSLQGKKTTVAATTAALESSGNFVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+SLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 205
           WEMF SSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 WEMFTSSCKRLRIMKGSEAKGLGCVA 201

[Close]

BLAST of HG10012740 vs. ExPASy TrEMBL
Match: A0A0A0L8H1 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G143580 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 184/209 (88.04%), Postives = 193/209 (92.34%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQ--PQSLRIISNNNNKRPLLLPESNQSSSGSN 60
           MAF+NGLNLDATELRLGPPG+D+NKLQ+Q  PQS+RI     NKRPLLLPESNQSSSGSN
Sbjct: 1   MAFQNGLNLDATELRLGPPGLDENKLQDQQLPQSIRI-----NKRPLLLPESNQSSSGSN 60

Query: 61  ITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTT---AATAVPEISGNYVKVSMD 120
           I+VSSDATL+TPPPSKAQIVGWPPVQSFRRNSLQGKKTT   A TA  E SGN+VKVSMD
Sbjct: 61  ISVSSDATLDTPPPSKAQIVGWPPVQSFRRNSLQGKKTTTVAATTAAQESSGNFVKVSMD 120

Query: 121 GAPYLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180
           GAPYLRKID+SLYKGYP LLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG
Sbjct: 121 GAPYLRKIDLSLYKGYPVLLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVG 180

Query: 181 DVPWEMFMSSCKRLRIMKGSEAKGLGCVA 205
           DVPWEMF SSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 DVPWEMFTSSCKRLRIMKGSEAKGLGCVA 204

[Close]

BLAST of HG10012740 vs. ExPASy TrEMBL
Match: A0A6J1IXI2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111480070 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94
Identity = 181/206 (87.86%), Postives = 187/206 (90.78%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDD--NKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSN 60
           MAF+N LNLDATELRLGPPG DD  N  QEQPQSLRII   NNKRP LLPESNQSSS SN
Sbjct: 1   MAFQNCLNLDATELRLGPPGADDDNNNNQEQPQSLRII---NNKRP-LLPESNQSSSASN 60

Query: 61  ITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAP 120
           I+VSSDATL+TPPP+KAQIVGWPPVQSFRRNSLQ KKT  ATA  E SGNYVKVSMDGAP
Sbjct: 61  ISVSSDATLQTPPPTKAQIVGWPPVQSFRRNSLQSKKTAVATAAQESSGNYVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+ LYKGYPELLQTL+DMFKF VGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLCLYKGYPELLQTLQDMFKFRVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180

Query: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 205
           WEMFMSSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 WEMFMSSCKRLRIMKGSEAKGLGCVA 202

[Close]

BLAST of HG10012740 vs. ExPASy TrEMBL
Match: A0A6J1IAA9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111473119 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.1e-93
Identity = 183/205 (89.27%), Postives = 188/205 (91.71%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           MAFE GLNLDATELRLGPPGVDDNK  ++PQSLRII   NNKRP LLPESNQSSS SNI+
Sbjct: 1   MAFEAGLNLDATELRLGPPGVDDNK--QEPQSLRII---NNKRP-LLPESNQSSSASNIS 60

Query: 61  VSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTA-ATAVPEISGNYVKVSMDGAPY 120
           VS D  LETPPPSKAQIVGWPPVQSFRRNSLQGKKT A A A  E +GNYVKVSMDGAPY
Sbjct: 61  VSDD-NLETPPPSKAQIVGWPPVQSFRRNSLQGKKTAATAAAAGESTGNYVKVSMDGAPY 120

Query: 121 LRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPW 180
           LRKID+SLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPW
Sbjct: 121 LRKIDLSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPW 180

Query: 181 EMFMSSCKRLRIMKGSEAKGLGCVA 205
           EMFMSSCKRLRIMKGSEAKGLGCVA
Sbjct: 181 EMFMSSCKRLRIMKGSEAKGLGCVA 198

[Close]

BLAST of HG10012740 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 235.3 bits (599), Expect = 4.2e-62
Identity = 120/200 (60.00%), Postives = 149/200 (74.50%), Query Frame = 0


Query: 3   FENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITVS 62
           ++  +NL ATELRLG PG ++           +    +NKR  +LPE+ +        + 
Sbjct: 7   YDELVNLKATELRLGLPGTEET----------VSCGKSNKR--VLPEATEKE------IE 66

Query: 63  SDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYLRK 122
           S    ET  P KAQIVGWPPV+S+R+N++Q KK+ +     E  GNYVKVSMDGAPYLRK
Sbjct: 67  STGKTETASPPKAQIVGWPPVRSYRKNNVQTKKSES-----EGQGNYVKVSMDGAPYLRK 126

Query: 123 IDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWEMF 182
           ID+++YK YPEL+++LE+MFKF+VGEY EREGYKGS++VPTYEDKDGDWMLVGDVPWEMF
Sbjct: 127 IDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMF 183

Query: 183 MSSCKRLRIMKGSEAKGLGC 203
           +SSCKRLRIMKGSE KGLGC
Sbjct: 187 VSSCKRLRIMKGSEVKGLGC 183

[Close]

BLAST of HG10012740 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61
Identity = 123/196 (62.76%), Postives = 143/196 (72.96%), Query Frame = 0


Query: 7   LNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNITVSSDAT 66
           +NL  TELRLG PG D+    ++  S     NNNNKR L      +  S S  T      
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVS---CCNNNNKRVLSTDTEKEIESSSRKT------ 64

Query: 67  LETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPYLRKIDVS 126
            ET PP KAQIVGWPPV+S+R+N++Q KK  +     E  G YVKVSMDGAPYLRKID+S
Sbjct: 65  -ETSPPRKAQIVGWPPVRSYRKNNIQSKKNESE---HEGQGIYVKVSMDGAPYLRKIDLS 124

Query: 127 LYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPWEMFMSSC 186
            YKGY ELL+ LE MFKF+VGEY ER+GYKGS++VPTYEDKDGDWML+GDVPWEMF+ +C
Sbjct: 125 CYKGYSELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTC 184

Query: 187 KRLRIMKGSEAKGLGC 203
           KRLRIMKGSEAKGLGC
Sbjct: 185 KRLRIMKGSEAKGLGC 187

[Close]

BLAST of HG10012740 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-55
Identity = 114/198 (57.58%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 1   MAFENGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSNIT 60
           M   NGLNL  TELRLG PG      +EQ   L  + +NN ++                 
Sbjct: 1   MEVTNGLNLKDTELRLGLPGAQ----EEQQLELSCVRSNNKRK----------------- 60

Query: 61  VSSDATLET-PPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAPY 120
            ++D+T E+ PPP+K QIVGWPPV+S R+N+    K            +YVKVSMDGAPY
Sbjct: 61  -NNDSTEESAPPPAKTQIVGWPPVRSNRKNN--NNKNV----------SYVKVSMDGAPY 120

Query: 121 LRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVPW 180
           LRKID+ +YK YPELL+ LE+MFKFTVGEYSEREGYKGS +VPTYEDKDGDWMLVGDVPW
Sbjct: 121 LRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPW 164

Query: 181 EMFMSSCKRLRIMKGSEA 198
           +MF SSC++LRIMKGSEA
Sbjct: 181 DMFSSSCQKLRIMKGSEA 164

[Close]

BLAST of HG10012740 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 113/202 (55.94%), Postives = 131/202 (64.85%), Query Frame = 0


Query: 1   MAFE--NGLNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPLLLPESNQSSSGSN 60
           MA+E  N LNL  TEL LG PG  +   +EQ  S      +NNKR  L  E+        
Sbjct: 1   MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVS---CVKSNNKR--LFEETRDEE---- 60

Query: 61  ITVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAVPEISGNYVKVSMDGAP 120
                    E+ PP+K QIVGWPPV+S R+N+               S +YVKVSMDGAP
Sbjct: 61  ---------ESTPPTKTQIVGWPPVRSSRKNN--------------NSVSYVKVSMDGAP 120

Query: 121 YLRKIDVSLYKGYPELLQTLEDMFKFTVGEYSEREGYKGSEYVPTYEDKDGDWMLVGDVP 180
           YLRKID+  YK YPELL+ LE+MFK  +GEY EREGYKGS +VPTYEDKDGDWMLVGDVP
Sbjct: 121 YLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVP 170

Query: 181 WEMFMSSCKRLRIMKGSEAKGL 201
           W+MF SSCKRLRIMKGS+A  L
Sbjct: 181 WDMFSSSCKRLRIMKGSDAPAL 170

[Close]

BLAST of HG10012740 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 108/232 (46.55%), Postives = 130/232 (56.03%), Query Frame = 0


Query: 7   LNLDATELRLGPPGVDDNKLQEQPQSLRIISNNNNKRPL-------LLPESNQSSSGSNI 66
           +N +ATELRLG PG +            +   NN KR         L   S    S S +
Sbjct: 2   INFEATELRLGLPGGNHGG--------EMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKV 61

Query: 67  TVSSDATLETPPPSKAQIVGWPPVQSFRRNSLQGKKTTAATAV---PEISGN-------- 126
            + +       PP+KAQ+VGWPPV+SFR+N + G+K T   A     + SG+        
Sbjct: 62  DLENMKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSAS 121

Query: 127 ------YVKVSMDGAPYLRKIDVSLYKGYPELLQTLEDMF-KFTVGEYSEREGYK----- 186
                 YVKVSMDGAPYLRKID+ LYK Y +L   L  MF  FT+G Y   +G K     
Sbjct: 122 ACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGP-QGMKDFMNE 181

Query: 187 --------GSEYVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGL 201
                   GS+YVPTYEDKDGDWMLVGDVPWEMF+ SCKR+RIMKGSEA GL
Sbjct: 182 SKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

The following BLAST results are available for this feature:

BLAST of HG10012740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877087.1	3.9e-102	93.63	auxin-responsive protein IAA4-like [Benincasa hispida]	[more]
XP_008438589.1	8.2e-100	91.26	PREDICTED: auxin-responsive protein IAA4-like [Cucumis melo] >KAA0049307.1 auxin...	[more]
XP_004134103.1	3.2e-96	88.04	auxin-responsive protein IAA4 [Cucumis sativus] >KGN56917.1 hypothetical protein...	[more]
XP_022980785.1	6.7e-94	87.86	auxin-responsive protein IAA4-like [Cucurbita maxima]	[more]
XP_023527189.1	5.7e-93	85.65	auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10012740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33077	5.9e-61	60.00	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]
O24543	1.0e-60	58.25	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]
Q38822	5.0e-60	62.76	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
O24542	3.3e-59	60.10	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
P32294	4.7e-58	56.65	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]

BLAST of HG10012740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4N6	4.0e-100	91.26	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3AXE9	4.0e-100	91.26	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483650 PE=3 SV=1	[more]
A0A0A0L8H1	1.6e-96	88.04	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G143580 PE=3 SV=1	[more]
A0A6J1IXI2	3.2e-94	87.86	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111480070 PE=3 SV=1	[more]
A0A6J1IAA9	6.1e-93	89.27	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111473119 PE=3 SV=1	[more]

BLAST of HG10012740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43700.1	4.2e-62	60.00	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	3.6e-61	62.76	AUX/IAA transcriptional regulator family protein	[more]
AT4G14560.1	5.0e-55	57.58	indole-3-acetic acid inducible	[more]
AT3G23030.1	1.7e-50	55.94	indole-3-acetic acid inducible 2	[more]
AT3G04730.1	1.5e-43	46.55	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 103..204 e-value: 2.9E-45 score: 154.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..74
None	No IPR available	PANTHER	PTHR31734:SF167	AUXIN-RESPONSIVE PROTEIN	coord: 1..202
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 107..193
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 12..201 e-value: 1.1E-57 score: 195.7
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 1..202
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 107..194 score: 26.992853

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012740.1	HG10012740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding