HG10012722 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012722
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transmembrane emp24 domain-containing protein p24beta3-like
Location	Chr01: 23684852 .. 23687446 (+)
RNA-Seq Expression	HG10012722
Synteny	HG10012722

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGAAGGTGAGAGAGAAGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCGAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCTGGGAATTTTGTCGTCGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATCGATTTCACTGTAACCCACATCAATTCCCTCTTTAATATGTCATTTAATTCATGTTTGCATGAAGATGCCTTTCGTTTCTCCTGATTTATAGTTTGATCTTGGATTGGGGGAGGGGTGCGAGGGTTCGGTTTTTCATTTCTCATTTTGCTGGGAAATCTTCTTCTCTTTGTTTTAATTTGGTTTAGGAAAGAAGGGTTAGGTTGTTTGTTGATTTTGACTTGTTTAAGAGCCTGGAAATGTTTGCCCTTTTGTTAATTTGGACGTATGGGGCTCATTTGTTTGGATTTGTGATGATATTTTTTATCGACAATTGTAATTCATCCCGCAAGATTATCTGTTGTTATACTGTTTCTGATCAATAGATCCACATTTATAATCCCCTTTCAGAAAAGTAAATTCTTCTTATTCTGTAATCCATCTGAACCTAGATATGTTTTTTTTTTTTTTGGGTTATGATTGGCTGGATATTAGTGTACCTGGAATCTCTTGACCGAGTTTTGTATTTAGTGGCTGATTGTTTCGTATCCATAATAAAATGTTCTTTTGAAGATATCCTAATGTGGGTTATTTTCGTGCAGGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGGGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGATCTTGCTAAAGATGGTAATTGATTAACTTCTGCGTAGATGCTAAGGTCTTGGTTGCTTATGAAAATTTTGAACCTCTCATTCACCTTGTTGTGGTAATTTCTTGCAGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACAGTATGTGGTTTATTTTTTGCATGGTTCTGTTATTATGAATTGGTGTTTATTTATGTCATTTCTTGAAATTCTTTTTAGGAATGTGATATCTAACTCTTTTGCACAAGATGAACGCCTTTTCTTCTCTAGTGGTCCAACATAACTATCATGAATATGATCGGATCTTGATGTCTAGGGAATCCAACACATGATAGCTTAATCATCAATCTTTTAGTACTGCATATAGGATCAAATGTTGAAACCAAGAGCTGAATAAATGAAATTGGCTTAGTCTTGAATATTGGCCACATTATAATCTCATAAAATTATTTAAGAAATTAAGTTTCTCTTTTGTTTCCAGTTTAATATTAATGTAGAGGCATAGACATGACAAACTCTATCCATATTTATGGTTCGAACCTTGGCACACAAAAAAGTATATTTGACAATGGTTTTGTTTTCCTTTTGCTTTCAATTAATAAGTTTTTCTTGCTCTCACCCCATCTTACTTTCTGGTTTTGTACTAGTGAGATAAGATATTAGAAACAAAATAGCCCAAGGAAGTATATCAGGATAAATTATAATTTCTTTTAGGAAAGAAGGGGAGAGAGAAAGTTAAAGAGGGAGAGAGGGGAGGCGAGAGAAATCTGGAGAGAAAAGAAAATAACTTTTTTTTGTCATGTCAGCAGGCCTTAACGTCAGACTAACTCCCAAACTAACAGAAGGACTATTTTTGAGATTTATTGATACTACGGGGACTAAATGTGAAACATTTCAAAGTATGCAAACTAAAGTTGAACCATTCTTAAAGTTCAAGGACTAAAATAGGATTTTAACCTTTCTTTTATCCTTTTGTTTAGATAGCAGACAATTATACTGAAAATGAGAGGTTTTATACATTGAACTTAATGACTTAAGAAAAAATGATGTACAAGAGATATTAAAATTTGGATGATATTATTTTAGTTGCTCGACAAAGTAAACTTAGAGATTTGGAGCTCAAATTCCTTAAATTTCATCTTTACTTTTTCATTCTATGCTAGTAGTCACATGTCAAGACTCATGATGAAATTAGGATATATTAATATACGAGTCTAGAGTCTACAGTGGGCTGAGTGAATGTTAAGTTTATTCTAACCGATCAACTTGAAGTTGAATTTATGGGTAACTCTACTGCACACAAGAAGTTCTTCTTCAAGACTGATTTGAATATTATGTTAGGACACTTGGTATTGCTTTTGCTACCTTTTTCTTGCCCCATTGTTGAGATCAAGCTGACAACTTATTGTTTTCCTTCTGAATGCAGCAAATGAAAGTACAAGAAAGCGCATAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGA

mRNA sequence

ATGGAGAGGAAGGTGAGAGAGAAGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCGAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCTGGGAATTTTGTCGTCGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATCGATTTCACTGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGGGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGATCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACACAAATGAAAGTACAAGAAAGCGCATAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGA

Coding sequence (CDS)

ATGGAGAGGAAGGTGAGAGAGAAGGGATTCGGATATCTGTTGGCGGGTCTTCTTCTGGCGAGCCTAATCGCCAGAATCGATTCAATTTCGGTCACTGTGAACGAGATTGAATGCGTCTATGAGTATGTATTGTACGAAGGCGATACTGTCTCTGGGAATTTTGTCGTCGTCGATCATGATATTTTCTGGGGCGCCGATCATCCCGGCATCGATTTCACTGTTACATCTCCCGCAGGTAATGTGGTACATTCTTTGAAGGAGACATCTGGGGACAAGTTTGAGTTTAAGGCTCCTCGCAGTGGAATGTATAAATTCTGTTTTCATAATCCCTACTCGACTCCGGAGACAGTTTCTTTCTACATCCATGTTGGTCACATTCCAAATGAACATGATCTTGCTAAAGATGAACACCTAGACCCTATAAATGTTAAAATTGCAGAGCTTAGAGAGGCATTGGAGTCGGTCACTGCTGAGCAGAAGTATTTGAAAGCACGTGATGCACGCCACCGTCACACAAATGAAAGTACAAGAAAGCGCATAATTTTCTATACAGTGGGAGAGTATTTGTTGCTTGCTGTTGCAAGTGGGCTTCAGGTCATTTACATTCGTCGGCTCTTCAGCAAGTCGGTTGCATATAACCGGGTCTGA

Protein sequence

MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV

Homology

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BLAST of HG10012722 vs. NCBI nr
Match: XP_038897452.1 (transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida])

HSP 1 Score: 421.4 bits (1082), Expect = 4.7e-114
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+ REKG GYLLAGLLL SLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRAREKGIGYLLAGLLLVSLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEH+LAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

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BLAST of HG10012722 vs. NCBI nr
Match: XP_023538709.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 4.0e-113
Identity = 206/215 (95.81%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER++RE GFGYLLAGLLLASL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLASLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of HG10012722 vs. NCBI nr
Match: XP_022939384.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata] >KAG6597415.1 Transmembrane emp24 domain-containing protein p24beta3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028874.1 Transmembrane emp24 domain-containing protein p24beta3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 204/215 (94.88%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER++RE GFGYLLAGLLL SL   IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of HG10012722 vs. NCBI nr
Match: XP_022974395.1 (transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima])

HSP 1 Score: 413.7 bits (1062), Expect = 9.8e-112
Identity = 204/215 (94.88%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER++RE G GYLLAGLLL SL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGCGYLLAGLLLVSLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

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BLAST of HG10012722 vs. NCBI nr
Match: XP_008438614.1 (PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 206/215 (95.81%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+VREKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

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BLAST of HG10012722 vs. ExPASy Swiss-Prot
Match: Q9LIL4 (Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana OX=3702 GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.2e-99
Identity = 178/215 (82.79%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+ + K   ++L GL+L + I +I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERR-QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWG+DHPG+DFTVTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD RHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 IFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of HG10012722 vs. ExPASy Swiss-Prot
Match: Q9S7M9 (Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana OX=3702 GN=At3g07680 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.8e-26
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 0


Query: 29  ISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTVTSPAGNVVHSLKET 88
           I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D  +  P G  +H  +E 
Sbjct: 22  IRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPTGEQIHDFREQ 81

Query: 89  SGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAEL 148
              K +F   + G+Y+FCF N     ET+ F + +GH       AKDEH  P+  +I++L
Sbjct: 82  ISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHFTPLMEQISKL 141

Query: 149 REALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGEYLLLAVASGLQVIYIRRLFSK 208
            EAL ++  EQ +L+A+  R    NE+  KR +   + E   L  AS LQV  +RRLF +
Sbjct: 142 EEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQVYLLRRLFER 201

Query: 209 SVAYNRV 216
            +  +RV
Sbjct: 202 KLGMSRV 208

[Close]

BLAST of HG10012722 vs. ExPASy Swiss-Prot
Match: Q769F9 (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=empA PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-18
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 13  LLAGLLLAS-LIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGID 72
           ++A L +AS  I    S  V+    EC+YE +      V  +F  +   I  G +   ID
Sbjct: 10  VIALLCIASNSIVESFSFKVSAKVEECIYEEI-----GVDLSFTAMFQVIQGGFN--DID 69

Query: 73  FTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIPNE 132
           FT+ SP   +V+S +  S      ++  +G+Y FCF N  S  T +TVSF + VG     
Sbjct: 70  FTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPI 129

Query: 133 HDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGEYL 192
            ++AK + L PI   I  L + + +V  EQ Y K R+A HR+T EST  R+++++V E  
Sbjct: 130 REIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAF 189

Query: 193 LLAVASGLQVIYIRRLF 207
           +L   S  Q+ Y+RR F
Sbjct: 190 VLIALSIWQIYYLRRFF 199

[Close]

BLAST of HG10012722 vs. ExPASy Swiss-Prot
Match: A7SXK3 (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g194562 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.8e-14
Identity = 41/139 (29.50%), Postives = 75/139 (53.96%), Query Frame = 0


Query: 70  IDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGHIP 129
           ID  +  P   V++S +  +  K+ F A   G Y +CF N  S  TP+ + F + +G  P
Sbjct: 59  IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAP 118

Query: 130 NEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGE 189
            +     +   D ++  +++L EA+  V  EQ+Y++ R+  HR  N++T  R+++++  E
Sbjct: 119 KDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFE 178

Query: 190 YLLLAVASGLQVIYIRRLF 207
            L+L   +  QV Y++R F
Sbjct: 179 SLVLVAMTLGQVYYLKRFF 197

[Close]

BLAST of HG10012722 vs. ExPASy Swiss-Prot
Match: Q9Y3B3 (Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens OX=9606 GN=TMED7 PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-13
Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 34  NEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTVTSPAGNVVHSLKETSGDKF 93
           N  +C YE      D   G    ++  +  G  H  +D  +  P G V++   +   D F
Sbjct: 44  NAKQCFYE------DIAQGTKCTLEFQVITGG-HYDVDCRLEDPDGKVLYKEMKKQYDSF 103

Query: 94  EFKAPRSGMYKFCFHNPYS--TPETVSFYIHVGH----IPNEHDLAKDEHLDPINVKIAE 153
            F A ++G YKFCF N +S  T +TV F   VG      P+E+ ++    ++   V I  
Sbjct: 104 TFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSI-- 163

Query: 154 LREALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGEYLLLAVASGLQVIYIRRLFS 208
             EAL+SV   Q + + R+A+ R   E    R+ +++VGE L+L V S  QV  ++  FS
Sbjct: 164 -HEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFS 213

[Close]

BLAST of HG10012722 vs. ExPASy TrEMBL
Match: A0A6J1FH03 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschata OX=3662 GN=LOC111445313 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 204/215 (94.88%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER++RE GFGYLLAGLLL SL   IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGFGYLLAGLLLVSLFTGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of HG10012722 vs. ExPASy TrEMBL
Match: A0A6J1IDU7 (transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima OX=3661 GN=LOC111473076 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.7e-112
Identity = 204/215 (94.88%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER++RE G GYLLAGLLL SL A IDSISVTVNE+ECVYEYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERRLRETGCGYLLAGLLLVSLFAGIDSISVTVNELECVYEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDF+VTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFSVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQV+YIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of HG10012722 vs. ExPASy TrEMBL
Match: A0A1S3AWG7 (transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 GN=LOC103483671 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 206/215 (95.81%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+VREKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of HG10012722 vs. ExPASy TrEMBL
Match: A0A5A7U264 (Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00810 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.1e-111
Identity = 205/215 (95.35%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+ REKG GYLLA LLL SLIA IDSISVTVNEIECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRAREKGLGYLLAALLLLSLIAGIDSISVTVNEIECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNE+D AKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNENDHAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of HG10012722 vs. ExPASy TrEMBL
Match: A0A0A0L4N3 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G145770 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.8e-110
Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+VREKG G+LLA  LL SLIA IDSISVTVNE+ECVYEYVLYEGD+VSGNFVVVDHD
Sbjct: 1   MERRVREKGLGFLLAAFLLLSLIAGIDSISVTVNEVECVYEYVLYEGDSVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWGADHPGI+FTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGADHPGIEFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHD AKDEHLDPINVKIAELREALESV +EQKYLKARDARHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDHAKDEHLDPINVKIAELREALESVISEQKYLKARDARHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV
Sbjct: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215

[Close]

BLAST of HG10012722 vs. TAIR 10
Match: AT3G22845.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 364.0 bits (933), Expect = 8.3e-101
Identity = 178/215 (82.79%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 1   MERKVREKGFGYLLAGLLLASLIARIDSISVTVNEIECVYEYVLYEGDTVSGNFVVVDHD 60
           MER+ + K   ++L GL+L + I +I S+SVTVN+ ECV EYVLYEGDTVSGNFVVVDHD
Sbjct: 1   MERR-QAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHD 60

Query: 61  IFWGADHPGIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFY 120
           IFWG+DHPG+DFTVTSPAGN+V +LK TSGDKFEFKAP+SGMYKFCFHNPYSTPETVSFY
Sbjct: 61  IFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFY 120

Query: 121 IHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRI 180
           IHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD RHRHTNESTRKR+
Sbjct: 121 IHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRV 180

Query: 181 IFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 216
           IFYTVGEY+ LA ASGLQV+YIR+LFSKSVAYNRV
Sbjct: 181 IFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of HG10012722 vs. TAIR 10
Match: AT3G07680.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-27
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 0


Query: 29  ISVTVNEIECVYEYVLYEGDTVSGNFVVVDHDIFWGADHPGIDFTVTSPAGNVVHSLKET 88
           I   ++  EC      YEGDT+  +FVV+  D  W  +  G+D  +  P G  +H  +E 
Sbjct: 22  IRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHGPTGEQIHDFREQ 81

Query: 89  SGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAEL 148
              K +F   + G+Y+FCF N     ET+ F + +GH       AKDEH  P+  +I++L
Sbjct: 82  ISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHFTPLMEQISKL 141

Query: 149 REALESVTAEQKYLKARDARHRHTNESTRKRIIFYTVGEYLLLAVASGLQVIYIRRLFSK 208
            EAL ++  EQ +L+A+  R    NE+  KR +   + E   L  AS LQV  +RRLF +
Sbjct: 142 EEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQVYLLRRLFER 201

Query: 209 SVAYNRV 216
            +  +RV
Sbjct: 202 KLGMSRV 208

[Close]

BLAST of HG10012722 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-13
Identity = 55/205 (26.83%), Postives = 102/205 (49.76%), Query Frame = 0


Query: 13  LLAGLLLASLIARIDSISVTVNEI--ECVYEYVLYEGDTVSGNFVVV--DHDIFWGADHP 72
           +L   L+ SL    +++ +TV     +CV E +      V  +++V+  +H IF     P
Sbjct: 10  ILLSALIFSLSPICEAVWLTVPHTGSKCVSEEI-QSNVIVLADYLVISEEHSIF-----P 69

Query: 73  GIDFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHV----G 132
            +   VT+P G V+H  + T+  +F F    SG Y  CF     +     F I++    G
Sbjct: 70  TVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTG 129

Query: 133 HIPNEHD-LAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRIIFY 192
               + D +A+ E ++ + ++  +L  A+E++     YL+ R+A  R  +E T  R+ +Y
Sbjct: 130 IAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWY 189

Query: 193 TVGEYLLLAVASGLQVIYIRRLFSK 209
           ++    +  V SGLQ++Y+++ F K
Sbjct: 190 SIMSLGICIVVSGLQILYLKQYFEK 208

The following BLAST results are available for this feature:

BLAST of HG10012722 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897452.1	4.7e-114	97.21	transmembrane emp24 domain-containing protein p24beta3 [Benincasa hispida]	[more]
XP_023538709.1	4.0e-113	95.81	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita pepo subs...	[more]
XP_022939384.1	3.4e-112	94.88	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita moschata]...	[more]
XP_022974395.1	9.8e-112	94.88	transmembrane emp24 domain-containing protein p24beta3-like [Cucurbita maxima]	[more]
XP_008438614.1	2.2e-111	95.81	PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Cucumis melo]	[more]

BLAST of HG10012722 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIL4	1.2e-99	82.79	Transmembrane emp24 domain-containing protein p24beta3 OS=Arabidopsis thaliana O...	[more]
Q9S7M9	3.8e-26	34.76	Transmembrane emp24 domain-containing protein p24beta2 OS=Arabidopsis thaliana O...	[more]
Q769F9	8.6e-18	34.52	Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum OX=4...	[more]
A7SXK3	9.8e-14	29.50	Transmembrane emp24 domain-containing protein OS=Nematostella vectensis OX=45351...	[more]
Q9Y3B3	8.3e-13	31.11	Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens OX=9606 GN=TMED7...	[more]

BLAST of HG10012722 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH03	1.6e-112	94.88	transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita moschat...	[more]
A0A6J1IDU7	4.7e-112	94.88	transmembrane emp24 domain-containing protein p24beta3-like OS=Cucurbita maxima ...	[more]
A0A1S3AWG7	1.1e-111	95.81	transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo OX=3656 G...	[more]
A0A5A7U264	3.1e-111	95.35	Transmembrane emp24 domain-containing protein p24beta3 OS=Cucumis melo var. maku...	[more]
A0A0A0L4N3	5.8e-110	93.49	GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G145770 PE=3 S...	[more]

BLAST of HG10012722 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22845.1	8.3e-101	82.79	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G07680.1	2.7e-27	34.76	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	1.7e-13	26.83	emp24/gp25L/p24 family/GOLD family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	PANTHER	PTHR22811:SF178	BNAC05G29650D PROTEIN	coord: 11..211
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 28..207 e-value: 5.2E-55 score: 198.7
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 31..206 e-value: 9.0E-44 score: 149.6
IPR009038	GOLD domain	PROSITE	PS50866	GOLD	coord: 36..123 score: 16.52075
IPR015720	Transmembrane emp24 domain-containing protein	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 11..211
IPR036598	GOLD domain superfamily	SUPERFAMILY	101576	Supernatant protein factor (SPF), C-terminal domain	coord: 44..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012722.1	HG10012722.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane