HG10012685 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012685
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ferredoxin
Location	Chr01: 23407505 .. 23407948 (-)
RNA-Seq Expression	HG10012685
Synteny	HG10012685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCTTCATTTTGTTCCATCTGCTTTCTCTCTACCCAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAGATAGCCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTGGTGATCGAGCACGAGGGGAAGGCCACCGAGCTTGAGGTCGATGCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCATAGAAATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGCATGCTGAGCGATGACGTTGTGGAGCAAGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCACATAAAAACCATCCCTGAGGAAGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

mRNA sequence

ATGGCAACTCTTCATTTTGTTCCATCTGCTTTCTCTCTACCCAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAGATAGCCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTGGTGATCGAGCACGAGGGGAAGGCCACCGAGCTTGAGGTCGATGCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCATAGAAATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGCATGCTGAGCGATGACGTTGTGGAGCAAGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCACATAAAAACCATCCCTGAGGAAGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

Coding sequence (CDS)

ATGGCAACTCTTCATTTTGTTCCATCTGCTTTCTCTCTACCCAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAGATAGCCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTGGTGATCGAGCACGAGGGGAAGGCCACCGAGCTTGAGGTCGATGCCGACGAGAGCATATTGAGCAGTGCATTGGACAATGGCATAGAAATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGCATGCTGAGCGATGACGTTGTGGAGCAAGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCACATAAAAACCATCCCTGAGGAAGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

Protein sequence

MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

Homology

[Close]

BLAST of HG10012685 vs. NCBI nr
Match: XP_023526556.1 (uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 7.5e-71
Identity = 136/147 (92.52%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQI CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of HG10012685 vs. NCBI nr
Match: XP_022956084.1 (uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQ+ CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of HG10012685 vs. NCBI nr
Match: XP_022979429.1 (uncharacterized protein LOC111479154 [Cucurbita maxima])

HSP 1 Score: 274.6 bits (701), Expect = 4.9e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQI CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 11  MATLHFVPSAFSLPKQKQPTKLSSVFKLRQTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 70

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL+SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 71  VDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 130

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 131 AYPRSDCHIQTIPEEELLALQLATAND 157

[Close]

BLAST of HG10012685 vs. NCBI nr
Match: KAG6582296.1 (Ferredoxin C 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.2 bits (700), Expect = 6.3e-70
Identity = 135/147 (91.84%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQI CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 133 MATLHFVPSAFSLPKQKQPTKLSSVFKLRTTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 192

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 193 VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 252

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 253 AYPRSDCHIQTIPEEELLALQLATAND 279

[Close]

BLAST of HG10012685 vs. NCBI nr
Match: XP_004134137.1 (ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein Csa_010907 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 137/147 (93.20%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   RPTTQI+CSRRRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD DESILSSALDNG+EIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCV
Sbjct: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHIKTIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of HG10012685 vs. ExPASy Swiss-Prot
Match: O23344 (Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-45
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 9   SAFSLPKQKQPTKLSSVFKLRPTTQIACSRR-------RLVVRSYKVVIEHEGKATELEV 68
           S  SLPK       S  F LR  T    + R       R++ R+YKVV+EH+GK TELEV
Sbjct: 11  STISLPKPYLSNSFS--FPLRNATLSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEV 70

Query: 69  DADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVA 128
           + DE+ILS ALD+G+++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVVE+GY+LLC +
Sbjct: 71  EPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCAS 130

Query: 129 YPRSDCHIKTIPEEELLALQLATAND 148
           YP SDCHIK IPEEELL+LQLATAND
Sbjct: 131 YPTSDCHIKMIPEEELLSLQLATAND 154

[Close]

BLAST of HG10012685 vs. ExPASy Swiss-Prot
Match: P08451 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=petF2 PE=3 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 8.2e-20
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 45  SYKVVIEHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEG 104
           +Y+V + ++G++     D+D+S+L SA   G+++P  C  GVC TC AR++SG VDQ + 
Sbjct: 3   TYQVEVIYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDA 62

Query: 105 M-LSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQ 142
           M +  +  +QGY+LLCVAYPRSD  I+T  E+EL ALQ
Sbjct: 63  MGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDELYALQ 100

[Close]

BLAST of HG10012685 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 45  SYKVVI--EHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQS 104
           +YKV +  E EG    +EV  D+ IL +A + GI++P+ C+ G C TC  +L+SGTVDQS
Sbjct: 3   TYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQS 62

Query: 105 -EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 138
            +  L DD +E GY L CVAYP SDC I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98

[Close]

BLAST of HG10012685 vs. ExPASy Swiss-Prot
Match: P00252 (Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 46  YKV-VIEHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQS-E 105
           YKV +++ EG  T ++V  DE IL  A D G+++P+ C+ G C TC  ++VSGTVDQS +
Sbjct: 5   YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 64

Query: 106 GMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 138
             L DD +E+GY L CVAYP SD  I+T  EE+L
Sbjct: 65  SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98

[Close]

BLAST of HG10012685 vs. ExPASy Swiss-Prot
Match: Q51577 (Ferredoxin-1 OS=Leptolyngbya boryana OX=1184 GN=petF1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.3e-19
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 45  SYKVVI--EHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQS 104
           S+KV +  E EG  T +EV  DE IL +A + GI++P+ C+ G C TC  ++ +GTVDQS
Sbjct: 3   SFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQS 62

Query: 105 -EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 138
            +  L DD ++ GY L CVAYP SDC I T  EE+L
Sbjct: 63  DQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98

[Close]

BLAST of HG10012685 vs. ExPASy TrEMBL
Match: A0A6J1GY17 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.2e-71
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQ+ CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of HG10012685 vs. ExPASy TrEMBL
Match: A0A6J1IWL8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 135/147 (91.84%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQI CS+RRLVVRSYKVVIEHEG+ TELE
Sbjct: 11  MATLHFVPSAFSLPKQKQPTKLSSVFKLRQTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 70

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VDADESIL+SALD G++IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 71  VDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 130

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHI+TIPEEELLALQLATAND
Sbjct: 131 AYPRSDCHIQTIPEEELLALQLATAND 157

[Close]

BLAST of HG10012685 vs. ExPASy TrEMBL
Match: A0A0A0L4U6 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69
Identity = 137/147 (93.20%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   RPTTQI+CSRRRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD DESILSSALDNG+EIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCV
Sbjct: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHIKTIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of HG10012685 vs. ExPASy TrEMBL
Match: A0A5D3D1U0 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   +PTT I+CSRRRLVVRSYKVVIEHEG+ TELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSV---KPTTHISCSRRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD DESILSSALDNG+EIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV
Sbjct: 61  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHIKTIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of HG10012685 vs. ExPASy TrEMBL
Match: A0A1S3AX36 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.4e-69
Identity = 136/147 (92.52%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIACSRRRLVVRSYKVVIEHEGKATELE 60
           MATLHFVPSAFSLPKQKQP KLSSV   +PTT I+CSRRRLVVRSYKVVIEHEG+ TELE
Sbjct: 36  MATLHFVPSAFSLPKQKQPIKLSSV---KPTTHISCSRRRLVVRSYKVVIEHEGQTTELE 95

Query: 61  VDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD DESILSSALDNG+EIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV
Sbjct: 96  VDPDESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 155

Query: 121 AYPRSDCHIKTIPEEELLALQLATAND 148
           AYPRSDCHIKTIPEEELLALQLATAND
Sbjct: 156 AYPRSDCHIKTIPEEELLALQLATAND 179

[Close]

BLAST of HG10012685 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 9   SAFSLPKQKQPTKLSSVFKLRPTTQIACSRR-------RLVVRSYKVVIEHEGKATELEV 68
           S  SLPK       S  F LR  T    + R       R++ R+YKVV+EH+GK TELEV
Sbjct: 11  STISLPKPYLSNSFS--FPLRNATLSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEV 70

Query: 69  DADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVA 128
           + DE+ILS ALD+G+++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVVE+GY+LLC +
Sbjct: 71  EPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCAS 130

Query: 129 YPRSDCHIKTIPEEELLALQLATAND 148
           YP SDCHIK IPEEELL+LQLATAND
Sbjct: 131 YPTSDCHIKMIPEEELLSLQLATAND 154

[Close]

BLAST of HG10012685 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 91.7 bits (226), Expect = 5.4e-19
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0


Query: 46  YKV-VIEHEGKATELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEG 105
           YKV ++  +G+  E EV  D+ IL +A + G+++P+ C+ G C TC  ++VSG VDQS+G
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 106 -MLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL 138
             L D  +E+GY L CVAYP+SDC I T  E EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of HG10012685 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 7   VPSAFSLPKQKQPTKL--------SSVFKLRPTTQIACSRRRLVVRSYKV-VIEHEGKAT 66
           + S   L +Q+ P  L         S+F L+ +T  A   R   + +YKV  I  EG+  
Sbjct: 10  IVSTSFLRRQQTPISLRSLPFANTQSLFGLKSST--ARGGRVTAMATYKVKFITPEGE-Q 69

Query: 67  ELEVDADESILSSALDNGIEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYS 126
           E+E + D  +L +A + G+++P+ C+ G C +C  ++VSG++DQS +  L D+ + +GY 
Sbjct: 70  EVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYV 129

Query: 127 LLCVAYPRSDCHIKTIPEEELL 139
           L CVAYP SD  I+T  EE ++
Sbjct: 130 LTCVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of HG10012685 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 24  SVFKLRPTTQIACSRRRLVVRSYKV-VIEHEGKATELEVDADESILSSALDNGIEIPHDC 83
           S+F L+  T  A   R   + +YKV  I  EG+  E+E D D  +L +A + GI++P+ C
Sbjct: 35  SLFGLKSGT--ARGGRVTAMATYKVKFITPEGE-LEVECDDDVYVLDAAEEAGIDLPYSC 94

Query: 84  KLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELL 139
           + G C +C  ++VSG+VDQS +  L D+ + +G+ L C AYP SD  I+T  EE+++
Sbjct: 95  RAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of HG10012685 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0


Query: 19  PTKLSSVFKLRPTTQIACSRRR------LVVRSYKV-VIEHEGKATELEVDADESILSSA 78
           P++     +L  TT    S  R          S KV +I  EG+  E+E + D  IL SA
Sbjct: 21  PSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESA 80

Query: 79  LDNGIEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLSDDVVEQGYSLLCVAYPRSDCHIK 138
            + G+E+P+ C+ G C TC  +LVSG VDQS G  L ++ +++GY L C+A P  DC + 
Sbjct: 81  ENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVY 140

The following BLAST results are available for this feature:

BLAST of HG10012685 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526556.1	7.5e-71	92.52	uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]	[more]
XP_022956084.1	1.3e-70	91.84	uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, p...	[more]
XP_022979429.1	4.9e-70	91.84	uncharacterized protein LOC111479154 [Cucurbita maxima]	[more]
KAG6582296.1	6.3e-70	91.84	Ferredoxin C 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004134137.1	4.1e-69	93.20	ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein...	[more]

BLAST of HG10012685 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23344	1.9e-45	63.01	Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1	[more]
P08451	8.2e-20	46.94	Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) O...	[more]
P00248	1.1e-19	51.04	Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2	[more]
P00252	1.4e-19	50.00	Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]
Q51577	5.3e-19	48.96	Ferredoxin-1 OS=Leptolyngbya boryana OX=1184 GN=petF1 PE=1 SV=1	[more]

BLAST of HG10012685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY17	6.2e-71	91.84	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1	[more]
A0A6J1IWL8	2.4e-70	91.84	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1	[more]
A0A0A0L4U6	2.0e-69	93.20	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1	[more]
A0A5D3D1U0	3.4e-69	92.52	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=...	[more]
A0A1S3AX36	3.4e-69	92.52	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1	[more]

BLAST of HG10012685 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14890.1	1.4e-46	63.01	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	5.4e-19	47.87	ferredoxin 3	[more]
AT1G10960.1	2.8e-15	35.21	ferredoxin 1	[more]
AT1G60950.1	3.6e-15	39.32	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	3.6e-15	36.72	ferredoxin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 51..123 e-value: 2.2E-14 score: 53.1
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 46..135 score: 12.133992
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 48..130 e-value: 6.81821E-23 score: 83.9836
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 43..145 e-value: 1.3E-27 score: 97.4
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 45..137 e-value: 7.5E-27 score: 91.0
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..142
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 1..142
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 44..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012685.1	HG10012685.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding