HG10012677 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAGATTGCCGAGCAGGAATTCGTGACGGAGGCCACAATCATTGGGCGGACATATCACAAGAATTTGGTCAGATTGTTAGGTTACTGCATCGAAAGCGGGAAAAATCGACTTCTTCTAGTGTACGAGCTAATGCCTAATGGAGCACTATCAAAATTCCTCTTCGGAAGTGGCGAAAACCCTAATTGGACACATAGGGTAGAAATTGCGATAGGAATAGCCAGAGGATTAGCGTACTTACACGAAGGGTGCGAGACGCAGATCATCCATTGCGACGTGAAGCCCCAAAATGTATTGCTCGATGCAAATTACACAGCGAAAATAGCAGATTTTGGGATATCGAAGCCGTTGAAGAAGGATCAAACGAGAACGAAGACGGTAGTGAGAGGGACATACGGGTACATGGCGCCGGAGTGGCTGAGGGGAGCTCCGGTGACGGCGAAGGTTGACGTGTATAGCTATGGGATAATGTTGCTGGAGATAATTTGCTGTAGAAGGTCAATTGAGTTGGATCGAATCGAAGAAGAAAGTGAGGAGGAGGATTTGGTTCTGTCGAATTGGGTTCTGTGTCGAGCGGCGGCCGGGAATCTGGAGGCGGTGATCGCAGATAAGCCGGAAATTTTGAAGGATTTCGAAAGGTTTAAACGAATGGCGATGGTGGGATTGTGGTGCGTTCATCCAGACGCATCTCAACGACCGTCGATGAAGAAGGTCACCCAAATGTTAGAAGGCACCGCCGAAGTTGGAACCCCTCCTCTGCTTCACTAA ATGACTGAGATTGCCGAGCAGGAATTCGTGACGGAGGCCACAATCATTGGGCGGACATATCACAAGAATTTGGTCAGATTGTTAGGTTACTGCATCGAAAGCGGGAAAAATCGACTTCTTCTAGTGTACGAGCTAATGCCTAATGGAGCACTATCAAAATTCCTCTTCGGAAGTGGCGAAAACCCTAATTGGACACATAGGTTGGATCGAATCGAAGAAGAAAGTGAGGAGGAGGATTTGGTTCTGTCGAATTGGGTTCTGTGTCGAGCGGCGGCCGGGAATCTGGAGGCGGTGATCGCAGATAAGCCGGAAATTTTGAAGGATTTCGAAAGGTTTAAACGAATGGCGATGGTGGGATTGTGGTGCGTTCATCCAGACGCATCTCAACGACCGTCGATGAAGAAGGTCACCCAAATGTTAGAAGGCACCGCCGAAGTTGGAACCCCTCCTCTGCTTCACTAA ATGACTGAGATTGCCGAGCAGGAATTCGTGACGGAGGCCACAATCATTGGGCGGACATATCACAAGAATTTGGTCAGATTGTTAGGTTACTGCATCGAAAGCGGGAAAAATCGACTTCTTCTAGTGTACGAGCTAATGCCTAATGGAGCACTATCAAAATTCCTCTTCGGAAGTGGCGAAAACCCTAATTGGACACATAGGTTGGATCGAATCGAAGAAGAAAGTGAGGAGGAGGATTTGGTTCTGTCGAATTGGGTTCTGTGTCGAGCGGCGGCCGGGAATCTGGAGGCGGTGATCGCAGATAAGCCGGAAATTTTGAAGGATTTCGAAAGGTTTAAACGAATGGCGATGGTGGGATTGTGGTGCGTTCATCCAGACGCATCTCAACGACCGTCGATGAAGAAGGTCACCCAAATGTTAGAAGGCACCGCCGAAGTTGGAACCCCTCCTCTGCTTCACTAA MTEIAEQEFVTEATIIGRTYHKNLVRLLGYCIESGKNRLLLVYELMPNGALSKFLFGSGENPNWTHRLDRIEEESEEEDLVLSNWVLCRAAAGNLEAVIADKPEILKDFERFKRMAMVGLWCVHPDASQRPSMKKVTQMLEGTAEVGTPPLLH Homology
BLAST of HG10012677 vs. NCBI nr
Match: XP_023526919.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 7.6e-50 Identity = 122/255 (47.84%), Postives = 131/255 (51.37%), Query Frame = 0
BLAST of HG10012677 vs. NCBI nr
Match: KAG6582740.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.2 bits (526), Expect = 9.9e-50 Identity = 121/255 (47.45%), Postives = 132/255 (51.76%), Query Frame = 0
BLAST of HG10012677 vs. NCBI nr
Match: XP_038896440.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [Benincasa hispida]) HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49 Identity = 129/275 (46.91%), Postives = 136/275 (49.45%), Query Frame = 0
BLAST of HG10012677 vs. NCBI nr
Match: XP_022955921.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [Cucurbita moschata] >KAG6582292.1 G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 206.1 bits (523), Expect = 2.2e-49 Identity = 121/255 (47.45%), Postives = 131/255 (51.37%), Query Frame = 0
BLAST of HG10012677 vs. NCBI nr
Match: XP_022979575.1 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 [Cucurbita maxima]) HSP 1 Score: 205.3 bits (521), Expect = 3.8e-49 Identity = 120/255 (47.06%), Postives = 131/255 (51.37%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy Swiss-Prot
Match: Q25AG3 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15 Identity = 63/245 (25.71%), Postives = 95/245 (38.78%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy Swiss-Prot
Match: Q0JEU6 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK3 PE=3 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15 Identity = 63/245 (25.71%), Postives = 95/245 (38.78%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy Swiss-Prot
Match: Q7FAZ2 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK2 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15 Identity = 59/245 (24.08%), Postives = 94/245 (38.37%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy Swiss-Prot
Match: Q25AG2 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15 Identity = 65/244 (26.64%), Postives = 91/244 (37.30%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy Swiss-Prot
Match: Q7FAZ0 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK4 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.3e-15 Identity = 65/244 (26.64%), Postives = 91/244 (37.30%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy TrEMBL
Match: A0A6J1GV65 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111457760 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49 Identity = 121/255 (47.45%), Postives = 131/255 (51.37%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy TrEMBL
Match: A0A6J1ITN2 (LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Cucurbita maxima OX=3661 GN=LOC111479255 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49 Identity = 120/255 (47.06%), Postives = 131/255 (51.37%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy TrEMBL
Match: A0A438KL49 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Vitis vinifera OX=29760 GN=LECRK3_28 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 5.9e-40 Identity = 99/217 (45.62%), Postives = 115/217 (53.00%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy TrEMBL
Match: A0A5N5KGV6 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_019660 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38 Identity = 102/254 (40.16%), Postives = 121/254 (47.64%), Query Frame = 0
BLAST of HG10012677 vs. ExPASy TrEMBL
Match: A0A7N2LVQ2 (Receptor-like serine/threonine-protein kinase OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 7.2e-38 Identity = 97/252 (38.49%), Postives = 119/252 (47.22%), Query Frame = 0
BLAST of HG10012677 vs. TAIR 10
Match: AT5G60900.1 (receptor-like protein kinase 1 ) HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15 Identity = 61/240 (25.42%), Postives = 89/240 (37.08%), Query Frame = 0
BLAST of HG10012677 vs. TAIR 10
Match: AT5G55830.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11 Identity = 59/246 (23.98%), Postives = 89/246 (36.18%), Query Frame = 0
BLAST of HG10012677 vs. TAIR 10
Match: AT3G53380.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0
HSP 2 Score: 46.2 bits (108), Expect = 2.7e-05 Identity = 26/69 (37.68%), Postives = 34/69 (49.28%), Query Frame = 0
BLAST of HG10012677 vs. TAIR 10
Match: AT5G15730.1 (Protein kinase superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11 Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of HG10012677 vs. TAIR 10
Match: AT5G03140.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
HSP 2 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 26/72 (36.11%), Postives = 37/72 (51.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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