HG10012636 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012636
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	AWPM-19-like family protein
Location	Chr01: 23002769 .. 23004542 (-)
RNA-Seq Expression	HG10012636
Synteny	HG10012636

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCAGGTGCAGTCTGCAGTTTCTGTCCTGTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATCGCTTCATGGGCAGTAAATCACGCAATGGAGAAATCTTTCGAATCAGGTAACTTTCAACTCTAATCTCAAACTTTATTGACCTATTTAGAATGTTGAAGTATTTTACAAGTTTTTCAGATCTCTAAGTGTTCTACTACTTTGTATGAATTTGTAGCATCAACATTGACATTGCCAGCTCGGTTGTTTCCGATATACTTCCCGATCGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGATTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGGATCCTTCAAACATTCACACAGCATCTGTTTCTTCTCTTGTAACTTTTGCAGTCACTGTACTTGCTATGGGGTAATTCTTATACACTTTTTTTTGTTGTTTTTGTTCATAAATATCAGTTATATGATAATTTTTCCAATAGTCATTTGATTATGAACTTTGTATTTAACTTAATGTCTTATTTAATCTGTTTTTCAGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGGTAAGACATTAAATTTTCTTATTCCAATTCCAAGTCTTCAAGCTAGAATCTTTTCAAGGGCATAACTTTTAGACACTAAACAAGGAAGGGTCTTTCATTAACTTTATTTTTCCATTAAAATATGATTCTAAAACTTTTATTAATGAAAAAATGCATCCCAAACTACACCATTTTTGTGCATCTCACTAAATTATCCAATCACAATCTGTCACATGGCAAATTCTTCTTACCAAAGAAAAACACACGTCAATTAGTGATAGCTCAGTTGATAAAAAGTGGTGAATTTAAAAATACTCTACTTCCATTTAAATTTATCTCTAATTACCTTTGTTATATACCTAATAAGAAGAAATTACATTTGTTCATGGAAAAGAAAAGAAAAGAAAAAAGTGTTACTTGCCCTTTTAAAATTAGAATGCCTTTCAAATTTATTAATTCCTTAATTTAATTAATCACTAACTTATAATATTGTAAAGTCATGAATTTTATTTATGAAAAGAAAGTAATAGAGTAACTGTCCAATAGTGAATAAAGATTACAACTCTATATTATTATTATACCAACCCTATCAATATATAGGTTTTTTATTTTTTAAAAAAGTAACCCATCATTATATAGTGCACAAATAGTTGATAGGGAAATTTTTAAAAATAGAAAAATAAGATTAACTATTTACACAAAATAATAAAATTTTTAGATAGTTATGATAGACGTTGATAAAAGTCTATCAAGGTCTATCAGTGATAGAAATGATAGAAGAGAAGTCTATCAATAATGTCTGTATTTTTTTTTACTATGTTCTGTAAATAGTTTAACATTTTTTCTATCGATGAAAATTTTCCTAATTGTTGATATCCTATTTCATTTTATAATTCCATGTCTTTCTTGAACCCTAATAATATGGACAGAAATAAAGAACAATACTATAAATTGTTTTCTTGTTCTAATTTTTTTTTTTTTTTTTTAATTTATAAGAAAGTAACAAATAAAATGAGATTTAATAATTGAAATGTAAAAAATTTGAACACAGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGTACAGGCGCTGTTCAAGTTGGAGTTGAAGAGATGATTGTTGCTGCCAACCGACATCCAGGAAGGGTTTGA

mRNA sequence

ATGGCTACTCAGGTGCAGTCTGCAGTTTCTGTCCTGTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATCGCTTCATGGGCAGTAAATCACGCAATGGAGAAATCTTTCGAATCAGCATCAACATTGACATTGCCAGCTCGGTTGTTTCCGATATACTTCCCGATCGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGATTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGGATCCTTCAAACATTCACACAGCATCTGTTTCTTCTCTTGTAACTTTTGCAGTCACTGTACTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGTACAGGCGCTGTTCAAGTTGGAGTTGAAGAGATGATTGTTGCTGCCAACCGACATCCAGGAAGGGTTTGA

Coding sequence (CDS)

ATGGCTACTCAGGTGCAGTCTGCAGTTTCTGTCCTGTTAGTCCTTAACCTTGTACTTTACTTCATCATCACCGTCATCGCTTCATGGGCAGTAAATCACGCAATGGAGAAATCTTTCGAATCAGCATCAACATTGACATTGCCAGCTCGGTTGTTTCCGATATACTTCCCGATCGGAAACATGGCGACGGGATTCTTTGTTATCTTCTCTTTGATTGCTGGGATTGTGGGAATGGCATCATCAGCCACAGGAATCACCAATATCACAAAATGGGATCCTTCAAACATTCACACAGCATCTGTTTCTTCTCTTGTAACTTTTGCAGTCACTGTACTTGCTATGGGGTTTGCATGGAAAGAAATTGAACTTGGTTGGACAGATTCAAACTTGAGGACTTTGGAGGTAATGACAATCATCACAAGTGCAACTCAGTTGTTATGTACAGGCGCTGTTCAAGTTGGAGTTGAAGAGATGATTGTTGCTGCCAACCGACATCCAGGAAGGGTTTGA

Protein sequence

MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKEIELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV

Homology

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BLAST of HG10012636 vs. NCBI nr
Match: XP_038905167.1 (membrane protein PM19L [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 154/169 (91.12%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+E+SFESASTLTLPARLFPIYFPIGN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEQSFESASTLTLPARLFPIYFPIGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSATGITN+TKW+ SN+HTASVSSL TFAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNASNVHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWT+SNLRTLEVMTIITSATQLLCTGAVQ+GVEEMIV+ NR  GRV
Sbjct: 121 IELGWTNSNLRTLEVMTIITSATQLLCTGAVQIGVEEMIVSNNRLAGRV 169

[Close]

BLAST of HG10012636 vs. NCBI nr
Match: XP_008438739.1 (PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSATGITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of HG10012636 vs. NCBI nr
Match: TYK16089.1 (glutamine synthetase leaf isozyme [Cucumis melo var. makuwa])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 451 MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 510

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSATGITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 511 MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 570

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 571 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 619

[Close]

BLAST of HG10012636 vs. NCBI nr
Match: KAA0049411.1 (glutamine synthetase leaf isozyme [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75
Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 451 MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 510

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSA+GITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 511 MATGFFVIFSLIAGVVGMASSASGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 570

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 571 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 619

[Close]

BLAST of HG10012636 vs. NCBI nr
Match: XP_004134167.1 (membrane protein PM19L [Cucumis sativus] >KGN57037.1 hypothetical protein Csa_010964 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74
Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG++GMASSATGITN+TKWD SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEM+VA  +  GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of HG10012636 vs. ExPASy Swiss-Prot
Match: Q6L4D2 (Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MA   ++ ++ LLVLNL++Y I+   ASW +NH +                       GN
Sbjct: 1   MAGVGRTMIAPLLVLNLIMYLIVIGFASWNLNHYINGETNHPGV-------------AGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
            AT +F++F+++AG+VG AS   G+ ++  W   ++   + S+L+ +A+T LA G A KE
Sbjct: 61  GATFYFLVFAILAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKE 120

Query: 121 IEL-GWTDSNLRTLEVMTIITSATQLLCTGAVQVGV 156
           I + G+    LR LE   II + TQLL    +  G+
Sbjct: 121 IHIGGYRGWRLRVLEAFVIILAFTQLLYVAMLHGGL 143

[Close]

BLAST of HG10012636 vs. ExPASy TrEMBL
Match: A0A5D3D0V4 (Glutamine synthetase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00110 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.6e-76
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 451 MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 510

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSATGITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 511 MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 570

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 571 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 619

[Close]

BLAST of HG10012636 vs. ExPASy TrEMBL
Match: A0A1S3AXU3 (uncharacterized protein LOC103483760 OS=Cucumis melo OX=3656 GN=LOC103483760 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.6e-76
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSATGITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVVGMASSATGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 169

[Close]

BLAST of HG10012636 vs. ExPASy TrEMBL
Match: A0A5A7U765 (Glutamine synthetase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006580 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 451 MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 510

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG+VGMASSA+GITN+TKW+ SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 511 MATGFFVIFSLIAGVVGMASSASGITNVTKWNSSNIHTASVSSLATFAVTILAMGFAWKE 570

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEMIVA  R  GRV
Sbjct: 571 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMIVAEKRVQGRV 619

[Close]

BLAST of HG10012636 vs. ExPASy TrEMBL
Match: A0A0A0L8V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150170 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.1e-75
Identity = 152/169 (89.94%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQ QSAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTLTLPARLFPIYFP GN
Sbjct: 1   MATQAQSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLTLPARLFPIYFPFGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFFVIFSLIAG++GMASSATGITN+TKWD SNIHTASVSSL TFAVT+LAMGFAWKE
Sbjct: 61  MATGFFVIFSLIAGVMGMASSATGITNVTKWDSSNIHTASVSSLATFAVTILAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWTDSNLRTLEV+TIITSATQLLCTGAVQ+GVEEM+VA  +  GRV
Sbjct: 121 IELGWTDSNLRTLEVITIITSATQLLCTGAVQIGVEEMVVAEKQVGGRV 169

[Close]

BLAST of HG10012636 vs. ExPASy TrEMBL
Match: A0A6J1GRY9 (uncharacterized protein LOC111456543 OS=Cucurbita moschata OX=3662 GN=LOC111456543 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.9e-72
Identity = 147/169 (86.98%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 1   MATQVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGN 60
           MATQV+SAVSVLLVLNLVLYFIITVIASWAVNHA+EKSFESASTL LPA LFP+YFPIGN
Sbjct: 1   MATQVRSAVSVLLVLNLVLYFIITVIASWAVNHALEKSFESASTLALPAHLFPMYFPIGN 60

Query: 61  MATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKE 120
           MATGFF+IFSLIAGIVGMA+SATGITN++KW+ SN+HTAS SSL T+AVTVLAMGFAWKE
Sbjct: 61  MATGFFIIFSLIAGIVGMATSATGITNVSKWNASNVHTASASSLATWAVTVLAMGFAWKE 120

Query: 121 IELGWTDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANRHPGRV 170
           IELGWT+ NLRTLEVMTIITSATQLLCTGA+QVGVEEMIV++NR  GRV
Sbjct: 121 IELGWTNGNLRTLEVMTIITSATQLLCTGAIQVGVEEMIVSSNRIGGRV 169

[Close]

BLAST of HG10012636 vs. TAIR 10
Match: AT5G18970.1 (AWPM-19-like family protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.2e-56
Identity = 108/165 (65.45%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 6   QSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMATGF 65
           +SA  +LL+LNL LYF+IT+IASWAVNH +E++ ESASTL+LPA++FPIYFP+GNMATGF
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 66  FVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKEIELGW 125
           FVIF+LIAG+VGMA+S TGI N+ +WD  N+H+A+ SSL+++++T+LAMG A KEI +GW
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 126 TDSNLRTLEVMTIITSATQLLCTGAVQVGVEEMIVAANR-HPGRV 170
           T++NLRTLEV+TII SATQLLCTGA+  GV E + +  R H GRV
Sbjct: 127 TEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGERPHLGRV 171

[Close]

BLAST of HG10012636 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-32
Identity = 72/148 (48.65%), Postives = 100/148 (67.57%), Query Frame = 0


Query: 4   QVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I  WA+N A++  FE    L LPA   PIYFP+GN AT
Sbjct: 5   QIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMGNAAT 64

Query: 64  GFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKEIEL 123
           GFFVIF+L+AG+VG AS+ +G+++I  W   ++  A+ ++ + + +TVLAMGFAWKEIEL
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 124 GWTDSNLRTLEVMTIITSATQLLCTGAV 152
              ++ LRT+E   II S TQL+   AV
Sbjct: 125 QGRNAKLRTMEAFLIILSVTQLIYIAAV 152

[Close]

BLAST of HG10012636 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-28
Identity = 65/148 (43.92%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 4   QVQSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIGNMAT 63
           Q++   S LLVLN  +Y I+  I +W++N A+   F   +  +LPA   PI+FP+GN AT
Sbjct: 5   QMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAAT 64

Query: 64  GFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWKEIEL 123
           GFF++F+LIAG+ G AS  +GI+++  W  +++  A  ++ + +++T+LAMGF  KEIEL
Sbjct: 65  GFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL 124

Query: 124 GWTDSNLRTLEVMTIITSATQLLCTGAV 152
           G  ++ LRT+E   II SATQLL   A+
Sbjct: 125 GMRNARLRTMEAFLIILSATQLLYIAAI 152

[Close]

BLAST of HG10012636 vs. TAIR 10
Match: AT1G04560.1 (AWPM-19-like family protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14
Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 0


Query: 1   MATQV-QSAVSVLLVLNLVLYFIITVIASWAVNHAMEKSFESASTLTLPARLFPIYFPIG 60
           MAT V ++  + LL LNLV+Y I+   ASW +N  +       S               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSF-------------GG 60

Query: 61  NMATGFFVIFSLIAGIVGMASSATGITNITKWDPSNIHTASVSSLVTFAVTVLAMGFAWK 120
           N AT FF+ FS++A +VG+AS   G  +I  W   ++  A  SS+V +A+T LAMG A K
Sbjct: 61  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 120

Query: 121 EIEL-GWTDSNLRTLEVMTIITSATQLLCTGAVQVG 155
           +I + GW    L+ +E   II + TQLL    +  G
Sbjct: 121 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143

The following BLAST results are available for this feature:

BLAST of HG10012636 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905167.1	2.0e-75	91.12	membrane protein PM19L [Benincasa hispida]	[more]
XP_008438739.1	2.0e-75	91.72	PREDICTED: uncharacterized protein LOC103483760 [Cucumis melo]	[more]
TYK16089.1	2.0e-75	91.72	glutamine synthetase leaf isozyme [Cucumis melo var. makuwa]	[more]
KAA0049411.1	5.8e-75	91.12	glutamine synthetase leaf isozyme [Cucumis melo var. makuwa]	[more]
XP_004134167.1	1.7e-74	89.94	membrane protein PM19L [Cucumis sativus] >KGN57037.1 hypothetical protein Csa_01...	[more]

BLAST of HG10012636 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L4D2	2.6e-14	33.33	Membrane protein PM19L OS=Oryza sativa subsp. japonica OX=39947 GN=PM19L PE=2 SV...	[more]

BLAST of HG10012636 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0V4	9.6e-76	91.72	Glutamine synthetase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209...	[more]
A0A1S3AXU3	9.6e-76	91.72	uncharacterized protein LOC103483760 OS=Cucumis melo OX=3656 GN=LOC103483760 PE=...	[more]
A0A5A7U765	2.8e-75	91.12	Glutamine synthetase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171...	[more]
A0A0A0L8V6	8.1e-75	89.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150170 PE=4 SV=1	[more]
A0A6J1GRY9	2.9e-72	86.98	uncharacterized protein LOC111456543 OS=Cucurbita moschata OX=3662 GN=LOC1114565...	[more]

BLAST of HG10012636 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18970.1	2.2e-56	65.45	AWPM-19-like family protein	[more]
AT1G29520.1	1.3e-32	48.65	AWPM-19-like family protein	[more]
AT5G46530.1	3.3e-28	43.92	AWPM-19-like family protein	[more]
AT1G04560.1	1.6e-14	36.54	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 14..154 e-value: 8.2E-53 score: 178.4
IPR008390	AWPM-19-like	PANTHER	PTHR33294	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..163
None	No IPR available	PANTHER	PTHR33294:SF3	AWPM-19-LIKE FAMILY PROTEIN	coord: 3..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012636.1	HG10012636.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006542	glutamine biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004356	glutamate-ammonia ligase activity