HG10012571 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012571
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	flowering-promoting factor 1-like protein 1
Location	Chr01: 22434102 .. 22434437 (-)
RNA-Seq Expression	HG10012571
Synteny	HG10012571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGCGTTTGGGTTTTCGACAACGGCGTGATTCGTCTCGTAGAGAGGGCGGGGGCAGCAGAGACGACGGGGGCAGGAGGACGGAGGAAAGTTCTAATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTGCTTAAAAACAAGCTGTCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCAACAGATTTTAATAAGCTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA

mRNA sequence

ATGTCAGGCGTTTGGGTTTTCGACAACGGCGTGATTCGTCTCGTAGAGAGGGCGGGGGCAGCAGAGACGACGGGGGCAGGAGGACGGAGGAAAGTTCTAATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTGCTTAAAAACAAGCTGTCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCAACAGATTTTAATAAGCTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA

Coding sequence (CDS)

ATGTCAGGCGTTTGGGTTTTCGACAACGGCGTGATTCGTCTCGTAGAGAGGGCGGGGGCAGCAGAGACGACGGGGGCAGGAGGACGGAGGAAAGTTCTAATATACACGCCGACGAACGAGGTGATGACGTCGTACGAGGTGCTTAAAAACAAGCTGTCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTTCTGTGGATCTAATTTCTCTTCCAACAGATTTTAATAAGCTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCCCACTAA

Protein sequence

MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH

Homology

[Close]

BLAST of HG10012571 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGAAETT  G  G+RKVLIYTPTNE MTSYEVL+NKLSMLGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH 112
           VYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]

BLAST of HG10012571 vs. NCBI nr
Match: KAA0049489.1 (flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50
Identity = 102/116 (87.93%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSML 60
           MSGVW+FDNGVIRLVERAGA ETT     G  G+RKVL+YTPTNE MTSYEVL+NKLSML
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH 112
           GWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]

BLAST of HG10012571 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.9 bits (520), Expect = 3.6e-49
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAE-TGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  YEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of HG10012571 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 7.9e-49
Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRLVERAGA E TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVE-TGAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWEVY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  YEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of HG10012571 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIY PTNE MTSY +LKNKL+ LGWEVY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAE-TGAGGRRKVLIYKPTNEAMTSYPILKNKLASLGWEVY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  YEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of HG10012571 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-29
Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGA-AETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEV 60
           MSGVWVF NGV+RLVE+  A A T  AGGRRK L++TP+ +V++SY  L+ +L+ LGWE 
Sbjct: 1   MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWER 60

Query: 61  YYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
           YYED  + QFHK  S+DLISLP DF+   + H+YDIVV+NR+ F+V D
Sbjct: 61  YYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108

[Close]

BLAST of HG10012571 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 3.6e-28
Identity = 59/112 (52.68%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSML 60
           M+GVWVF +G++R VE  G+ E++     G GGRRKVL++ P+ EV+ SYEVL+ +L  L
Sbjct: 1   MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLREL 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
           GWE Y  D  ++QFH+ S+V LIS+P DF+K K  H+YDIVV+ RN+F+V+D
Sbjct: 61  GWERYLTDPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112

[Close]

BLAST of HG10012571 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGG-----------RRKVLIYTPTNEVMTSYEVLK 60
           MSGVWVF NGV++LVE   A+  +G GG           RRK L++ PT EV+TSY  L+
Sbjct: 1   MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLE 60

Query: 61  NKLSMLGWEVYYEDG--------EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRN 109
            KL+ LGWE YY  G         ++QFHK SSVDLISLP DF++  + H+YDIVV+NR+
Sbjct: 61  RKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRD 120

[Close]

BLAST of HG10012571 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.5e-26
Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWE 60
           MSGVWVF+NGVIRLVE        +T + GRR VL+Y PT E ++SY  L+  L  LGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
            Y+  D +++Q+HK SS+DLISLP DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of HG10012571 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-25
Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVF NGVIRLVE    +  +    RRKV++Y PT EV++SY  L+  L  LGWE Y
Sbjct: 1   MSGVWVFKNGVIRLVENPNQS-GSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERY 60

Query: 61  YEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
           +  G  +++QFHK SS+DLISLP DF K  + ++YDIVV+N N F V+D
Sbjct: 61  FGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of HG10012571 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWE 60
           MSGVW+FDNGVIRLVERAGAAETT  G  G+RKVLIYTPTNE MTSYEVL+NKLSMLGWE
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSGKRKVLIYTPTNEAMTSYEVLENKLSMLGWE 60

Query: 61  VYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH 112
           VYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  VYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]

BLAST of HG10012571 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 102/116 (87.93%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSML 60
           MSGVW+FDNGVIRLVERAGA ETT     G  G+RKVL+YTPTNE MTSYEVL+NKLSML
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSGKRKVLMYTPTNEAMTSYEVLENKLSML 60

Query: 61  GWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQSH 112
           GWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  GWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]

BLAST of HG10012571 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAE-TGAGGRRKVLIYTPTNEAMTSYPVLKNKLASLGWEVY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  YEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of HG10012571 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.8e-49
Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRLVERAGA E TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVY
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVE-TGAGGRRKVLIYTPTNEAMTSYSVLKNKLASLGWEVY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  YEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]

BLAST of HG10012571 vs. ExPASy TrEMBL
Match: A0A6J1IC95 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111472346 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.7e-39
Identity = 83/110 (75.45%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVFDNGVIRL E  G +   G    R VLIYT TNE MT+  VLKNKL  LGWE+Y
Sbjct: 1   MSGVWVFDNGVIRLAEGGGGSRNRG----RNVLIYTATNEAMTTLTVLKNKLLSLGWEIY 60

Query: 61  YEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS 111
           YED E++QFHKPSSVDLISLPTDFNK+KARHLYD+VVRNRNLF VKDMQS
Sbjct: 61  YEDAEIVQFHKPSSVDLISLPTDFNKVKARHLYDVVVRNRNLFHVKDMQS 106

[Close]

BLAST of HG10012571 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 5.3e-27
Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWE 60
           MSGVWVF+NGVIRLVE        +T + GRR VL+Y PT E ++SY  L+  L  LGWE
Sbjct: 1   MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60

Query: 61  VYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
            Y+  D +++Q+HK SS+DLISLP DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]

BLAST of HG10012571 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 117.1 bits (292), Expect = 9.1e-27
Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 1   MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVY 60
           MSGVWVF NGVIRLVE    +  +    RRKV++Y PT EV++SY  L+  L  LGWE Y
Sbjct: 1   MSGVWVFKNGVIRLVENPNQS-GSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERY 60

Query: 61  YEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKD 108
           +  G  +++QFHK SS+DLISLP DF K  + ++YDIVV+N N F V+D
Sbjct: 61  FGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

[Close]

BLAST of HG10012571 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-25
Identity = 60/124 (48.39%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 1   MSGVWVFD-NGVIRLVER------AGAAETTGAGG------RRKVLIYTPTNEVMTSYEV 60
           MSGVWVF+ NGV+RLVE         ++E++ +GG      RRK+L++ P++EV++SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LKNKLSMLGWEVYY---EDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQ 109
           L+  L  LGWE YY       ++QFHK +S+DLISLP DF+K  + H+YDIVV+N N+F 
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 177

The following BLAST results are available for this feature:

BLAST of HG10012571 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57101.1	3.8e-51	92.04	hypothetical protein Csa_010574 [Cucumis sativus]	[more]
KAA0049489.1	5.5e-50	87.93	flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613...	[more]
XP_022956217.1	3.6e-49	91.82	flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 F...	[more]
XP_022979994.1	7.9e-49	90.91	flowering-promoting factor 1-like protein 1 [Cucurbita maxima]	[more]
XP_023528953.1	1.8e-48	90.00	flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10012571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LGE3	1.1e-29	58.33	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q0E1D7	3.6e-28	52.68	Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q8LR63	1.2e-26	50.39	Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9LXB5	7.5e-26	53.64	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O23624	1.3e-25	54.13	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]

BLAST of HG10012571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAK6	1.8e-51	92.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1	[more]
A0A5A7U7L7	2.7e-50	87.93	Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GVQ4	1.7e-49	91.82	flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IY48	3.8e-49	90.91	flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IC95	4.7e-39	75.45	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of HG10012571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10625.1	5.3e-27	53.64	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT5G24860.1	9.1e-27	54.13	flowering promoting factor 1	[more]
AT4G31380.1	3.8e-25	48.39	FPF1-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF6	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..108
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012571.1	HG10012571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development