HG10012450 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012450
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Serine/threonine-protein kinase TOR isoform X3
Location	Chr01: 21340132 .. 21340517 (+)
RNA-Seq Expression	HG10012450
Synteny	HG10012450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCATTGACCAAGAAGCTCAAGATTAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGTATGGTCTCTATGTGCTTTGCGCTTGTTTCTGCCTGTCTCTTTCTGCTGTATGTTTCAATTCAAAGTATCTGTGGTGCGAATTGATTGTTCTTCGCTTCTTACTAATTACAGGAAGAGAAGGAAGCTTTACAGATGGGTCTGAAGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGGTAATGCAGCTTTCACATGCTTGTTATTAAATCGTCGTACTTGA

mRNA sequence

ATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCATTGACCAAGAAGCTCAAGATTAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTGAAGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGGTAATGCAGCTTTCACATGCTTGTTATTAAATCGTCGTACTTGA

Coding sequence (CDS)

ATGGCGAAGTTCAATGTAGTTCAGAAGCAAAGACGAGCTCTTAAAGCTCAGATCAAGAGGGACGCCCATGGTGATCCATTGACCAAGAAGCTCAAGATTAAGCAACAACCTACTTATGTATCCAGCAAGCGTAAGCGCAAATTGATGAAGAAAAAACGCAGAGAAGAGAAGGAAGCTTTACAGATGGGTCTGAAGAACATGGAAGATGTTGAAATGGCTGTTGCTGAAGGTAATGCAGCTTTCACATGCTTGTTATTAAATCGTCGTACTTGA

Protein sequence

MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEALQMGLKNMEDVEMAVAEGNAAFTCLLLNRRT

Homology

[Close]

BLAST of HG10012450 vs. NCBI nr
Match: XP_038901336.1 (uncharacterized protein LOC120088229 isoform X1 [Benincasa hispida])

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRALKAQ+KRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRALKAQMKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. NCBI nr
Match: XP_038901418.1 (uncharacterized protein LOC120088229 isoform X2 [Benincasa hispida])

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-28
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRALKAQ+KRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRALKAQMKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. NCBI nr
Match: XP_023523067.1 (uncharacterized protein LOC111787215, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.7 bits (335), Expect = 8.2e-28
Identity = 74/77 (96.10%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQ KRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAEG 78
          QMGL NMEDVEMAVAEG
Sbjct: 61 QMGLTNMEDVEMAVAEG 77

[Close]

BLAST of HG10012450 vs. NCBI nr
Match: XP_004147643.1 (uncharacterized protein LOC101207928 [Cucumis sativus] >KGN57224.1 hypothetical protein Csa_011616 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. NCBI nr
Match: XP_008439032.1 (PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo] >KAA0067634.1 uncharacterized protein E6C27_scaffold70G00010 [Cucumis melo var. makuwa] >TYK23636.1 uncharacterized protein E5676_scaffold577G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 132.1 bits (331), Expect = 2.4e-27
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. ExPASy TrEMBL
Match: A0A0A0L881 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171810 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.8e-28
Identity = 73/76 (96.05%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAAKAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. ExPASy TrEMBL
Match: A0A5D3DJ04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00010 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. ExPASy TrEMBL
Match: A0A1S3AXD1 (uncharacterized protein LOC103483941 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483941 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. ExPASy TrEMBL
Match: A0A1S3AXT9 (uncharacterized protein LOC103483941 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483941 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA++AQIKRDAHGDPLTKKLKIKQQPTYVS+KRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAVRAQIKRDAHGDPLTKKLKIKQQPTYVSNKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. ExPASy TrEMBL
Match: A0A6J1I7G5 (uncharacterized protein LOC111470700 OS=Cucurbita maxima OX=3661 GN=LOC111470700 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 73/76 (96.05%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAKFNVVQKQRRA KAQ KRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL
Sbjct: 1  MAKFNVVQKQRRAHKAQTKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60

Query: 61 QMGLKNMEDVEMAVAE 77
          QMGL NMEDVEMAVAE
Sbjct: 61 QMGLTNMEDVEMAVAE 76

[Close]

BLAST of HG10012450 vs. TAIR 10
Match: AT1G08580.1 (unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-13
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MAKFNVVQKQRRALKAQIKRDAHGDPLTKKLKIKQQPTYVSSKRKRKLMKKKRREEKEAL 60
          MAK+N + K++R  KA  KR  HGDPLT KLK +     VS KR+RKL++K RRE+K+ +
Sbjct: 1  MAKYNEIAKKKREAKADRKRAIHGDPLTNKLKTRTPVPSVSGKRQRKLLRKWRREQKDMV 60

Query: 61 QMGLKNMEDVEMAVAE 77
          + GL  MEDVEMA A+
Sbjct: 61 EKGLVTMEDVEMASAQ 76

The following BLAST results are available for this feature:

BLAST of HG10012450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901336.1	4.8e-28	97.37	uncharacterized protein LOC120088229 isoform X1 [Benincasa hispida]	[more]
XP_038901418.1	4.8e-28	97.37	uncharacterized protein LOC120088229 isoform X2 [Benincasa hispida]	[more]
XP_023523067.1	8.2e-28	96.10	uncharacterized protein LOC111787215, partial [Cucurbita pepo subsp. pepo]	[more]
XP_004147643.1	1.8e-27	96.05	uncharacterized protein LOC101207928 [Cucumis sativus] >KGN57224.1 hypothetical ...	[more]
XP_008439032.1	2.4e-27	94.74	PREDICTED: uncharacterized protein LOC103483941 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of HG10012450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10012450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L881	8.8e-28	96.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171810 PE=4 SV=1	[more]
A0A5D3DJ04	1.2e-27	94.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AXD1	1.2e-27	94.74	uncharacterized protein LOC103483941 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3AXT9	1.2e-27	94.74	uncharacterized protein LOC103483941 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I7G5	2.6e-27	96.05	uncharacterized protein LOC111470700 OS=Cucurbita maxima OX=3661 GN=LOC111470700...	[more]

BLAST of HG10012450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08580.1	6.1e-13	53.95	unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..54
None	No IPR available	PANTHER	PTHR36709	OS02G0604100 PROTEIN	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012450.1	HG10012450.1	mRNA