HG10012365 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10012365
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMADS box transcription factor
LocationChr01: 20435273 .. 20442036 (-)
RNA-Seq ExpressionHG10012365
SyntenyHG10012365
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCTTGTGAGCTCTCTGTGCTTTGTGATGTTGATGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTCTTTGAATTTGGCAGCACTGAGTATATATATATATATATATACTAATTTCTTTTTTTTCTTTTCTTTTTTTAATCCTCTTCTTTTTTCTTCCATTATTTATGGGAACTATTCATCACTTCCATGATCAGCATGAACAAAATCCTTGAGAAGTATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGAGTGACATACAGGTTTTCATTTCTTCTTATTTCCCTTTAATTTTCTCACACAAATTTAAAACAATCTCAATTCATTTTAACCTTATGACAGACATAAGATTTTTTTTTTATAGTTCGTATAGTTGGGAGATCGAATGCAATTTATGCCTTATTCACTCAGTTATATGTTCAAATCGACTTATAGGATATAGGGTTGGTTTCAAAGAAAGATTTTTTTTTTTTATTTTATTTTTATTTATTTTTATTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTGAATCTGTTAGTGATGATGATGATGATGATCTACATCTTGATAATGCAGATAGAGGAGGTGTCAAAGCTCAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGTTAATTAATTAAATCAAGACCTATTTTTTTTATTATTTAATAAAAACTCTTCGTTTGATGTGTGTTTTGTGAATTTGAAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAGCAGTTGGACAAAACTCTTTCACACGCTAGACAGCGGAAGGTAATTCAGGATAAGGATTGTTTTTTCCTTTTTTTTTTATTCTTTTTATTCTGTTGGAATCACTAAAATTTCATTACAATAATGAATGATTCCTCTACTGACTAGTGTTTTCTCCCAATTACAATCTTTTGTCTATTAATTTATTGGATCTTTTTATCAAAAACTCGGATTTGGTCCGACCCAAAATGATTTTGATATCTATCATATTTCTGAATTGATTATAAACGAGTTACCAAAAGAATATGGAAGGATTTCTTTAATTGTTTAGAGGTTGTGATTATTTTATGTTGTCCTTTTTTCATACATGATATGCTTTTCGTTGTCAACAATAGTGGATAGATTGAATCAAATTCGAAAAGTTATGTCTTTGGTTTTGATACTGATTTAACTTTTTTAGAAAAGTTGACACTGATTTAACTAAGCATAACAATATTTTGAAAGTCCTCCCTTCGAATACATGTGTGGTGTTGTTATTTTCAAACATCTTATTATTAGGGCACATAGAATTGCAAATCTTATGAATAGAAATAATATTTGATAAGTATCCATAATATCAAATATGGTTAATTTTATTTTAAAAAGGTTTAAACTTGTGAACTTATTTATATTTTAAATGGAAGCCTATGGTTAAAAGATTAGATCTCCTTGCTCTACTAATTGCACTAAGAAAATATTCTAGCTCTATAAGTTGTTAAATCTTTTTTTTTTTTTTTTGATATCCGTGAGTGTCCGGACCAGCTTACGCGCACCTCGACTAATTTCACGGGACAACCCACCCGACCTTACAACAGGCGGGTAATCCTAGGTAGGTGGCTACCATGGATTGAACCCACAACCTTTAAGCCCTTTGACTTTTTTTTAATGTTCCCACTACCACTAGGTCAAATCCATGATGGTTTATAAATTATTAAATCACTACTAAATCTCAGCTCAATGATAATATAGACACAATAAAGGTTCGTATGATTTGTCTATTATACTCTAAAATTACATTAAATCGCCACCTGGATGACATAAAGATGATTAAACCTTGTAGATTAGGATATTGAATGGTAGTGATAGTAACCAATTATTGAAACCGAATAGACTCGGGTATGGATGAGTTGAAATGTGGCATTAAATGAGTTCAATTTTATAAATTAGATTTTGAAGTATTTAAGATTTTTTTTGGTACAACAATTGTGGGATGAGGAATTGAACATTTAACCTCTAGGAACAGAGCGGTGTCAATACCACTGATCTAAGTTCATTTTGGCTTAAGTATTTAAGATTGTGTCTAATGAAATCTCTAATTTTTTCAGAAAAAAAAGATCTCATAAACTTAACTGTGTCTATCTTTGTCCTTTATATTCAAAGTTTGGATTGAATATGTCACACCCGCCCTAGATTATCCTTTCGAACTTAGGACGGGATGTGATGACAGTAGACACCAATGGTGCCTACCGTCAAACTTTTCCTTGAACTTGAAACTTAGTTTGGATTAACTACAATACTTATACGTCCCAACAACTACACTTTTAATAAAACTCAGTACTTGATTACATGTTCCCTTACACTGATAAGTTGGGGGGCAGCTTCTAATAAGCTAATTCTGGTTGAAACTCAAGGGCAACCAGATGGAAAAGTAAATATAAAAGGTTGAGTTAAGAAGCCCAGTGAGTGATGATTTTATTAAAGTATGTTTAAAAAATTTGGACAATTTCTCAATTTGTTCCTTACACAAGGACCATGCTAATCTTCTCTGTATTGTTCCAATTTTATCATATGTCATCCTCATCACATCTTGTCCTAGGTTCAAAAGGTAATCTAGGATAGAATGTGACAAAATACTTCCAAATAGATAAAGGCTTAAAAATTTAGAGACCAAATTTTGGAATATAGTGTTTATATATCAGTTGGGATGGATGTTAATGTCTTTGTTGTTAATCGCAGGCTGAGATAATGCTTCAAAAGTTAGCAGACTTGCACAAAATGGTAAGATAAACCAAGTTTAGTGTTTGTTTGGATTAACTTTCAAAATATTTAAATAAGTGTTTAATAAGTTAAAAAAAAATGTGTTTATAAACACTTAAAAGTCAATTCAAGTAGTGCTTTAATTTACGTACAAAATATGATATCCAAGGGTTATTACACATACTAACTACAGACATATAATGTGTACATTTTCTAGGCATGTTTGTAATATTCTCAATTTTAATTTTTTTTGTTTTTTTTGGAAGAAAATGAAATTGTATTTGATAATTATTTTTTAGACATGTTTTTAAATATAAAAAAATGAGTCAAACTATTTACAAATAGAAAAAAAATTTCCTGTGATAGAATTCTATCGCTTATCGCGGTTTATCGCTGATAGACAGTGAAATTTATTTATATTTGTAAATAATTTGATATTTTTTTTTTGTTTAGAGTAATTTTCCAATTTTTTATTATAATTATTTTTGTTTCAATTTTTAAGAAGGAAACTAATATATATATATATTTCTATGTTTCTTTGTTTTCTTTCAAAATTCAAAATAAATAAAGTTTTACATGAAATTTTGTTTGAAAAGTGAAATGGTTAAAATCAATATGTTACATTTATTATTATTATTATTATTTGATATTATGATGCATTTTATAAAGTAAAAAAGAAAAAATGCTTTTAATTATATTGAAAGAAAAAGTTAGAAATAAGAAACTAGAATTTTGGTGTTTTCAACATATAATTATGTAAATGTTTCTTTACAAAAGGAAATACGATTGTCAAGAAGAAATAGATAAGAATCACCAAATGCTTATATATTTTTCAATAATAATAGTAACAAATATTATCAAAACAGACTCATAACTTTGTATTTATCTTCCAAGAAAATTATGAAACAATGTTGCATAGCAATACTTTTATTGTTTTGTATTGATTGTAGTTGAATAATAGTACTTTGTATTATTTTAGTACAGTGTTAAACCTAACATTACTATAGAAAATTCTACTATATTATAAGTTTGAAGAAAAAATGAAATGCATAATCATGCAGAAAAGAGATGAAATCAAAAGTAAATAATATAATGTTTGGATAAATTTATGAATTTATAAGATAATCGTGTGGTGTGATTCAATTGAAATGAAATTAAAGAGTAAGTTTATATGTTTGTTGTTTATTTATTTTTGAGTGAGAAGTGACAAGCATTAGTTTTTTTTTTTTGAGACATACAGGAGCAGGACCTTGGAGATCAAAATACTCAGCTCAAGTCAAAGGTTCTTCTCTCTTCCTTTTTAACCTTCCTCCATCAATATACATGCTTAAATTTTAATTATAATTTTTTTAAAGATATATATATTTATCTTCAACTTACTTTGTATCATTTTAAACTTAATATCATATCTTTTATGTCCATTATTTCTTGGCCAATGAGAACTTTTTCTCTTTTTTTATTCTCCTATGCCTGTAGGTCTTTGGAGTCTGTACCTTATAGTTTTAAGTATTTTCTTAAATATTTTCATTGAAAATCTTTCAACTATGTTTCAAGTCTCTATTCAAAAAGAAATTTTAAATTAATCTAATATTTTAAGGTGCTTAAATTCATCAAGACTTTTTTTCCCAAAACCCTTTAATCGTCTAAAAGCATTCAAATAAAATTATACTATGCTCGTTTTAAACTATTGAATCCTTTTCAAAGTGTTCTGGTTTGAAAAATTGATCTGGTTTGAAAACCATTTTTGTAAAGTGTTCTGGTTTGATGGACAAAATGAATTAATGAGTTGTTAGTGTAAATTTGTTTTCAAATATAGAAAAATGAGTCAAACTATTTACAAATACAGAAATTTTTTACTGTCTATCAGCGACAGACCGCGATAGAATTGTATCGCTGATAGACAGTGAAATTTTTATATACTTATAAATAATAATTTGATTTTTTTTTTTATTTATAGTAATTTTCCTCTATGTACTATTAATATTGATCCTTTCATATGTGAACTTAAAAATTCATAGAAAGTTCTTTCTACAAGTGGAAATCTCTATTGGAAATGAAATGACATTGTAAGAGTTTAAACATATGATCTCCTGTTATAATACTGTGTTAAATGACCATGGAACTCAAAAAGGTTTAAGCTAATGGATATTTAACACTTAATAGTATTTTCATAGCAAAAAATATCACATTACACATTTAATTAGTCTCTAAACTTTGAATTTTGTATCTATTTTGGTAAATATTTTTAAAATTATTTATTTAGTCTTTGAACTGATCTCTATTCTTTCTTTTAATTACAAATTTAATAGACACAAAATTGAAAATTTTAGAATTCTACTAAAAATAAAATTCAAACTTACATCTCAGAACAGATAATTTTTAAAAAATTTAAAATTGTCTATTAAATTGAACCCAGTTGCATTGAAGGACGCTCCAGTGTGCTTTAAATAAGGGCACCTTGCTTGGTAGCCCTCACATGTTTCTAGAAAGCATGCTTATAAGCTAGAAGCACTCTTTAAAACACTTTCTATAAAAGTCGTTGAATGAGAGGCATGTAGGCTAGAAATTAGAGAGATAAAGATGTCTAGAGTGAGTGACTTGTTATTTATTCCATAAAGAAAAATGTTAGTCAGAGACATACAAATTAGATAGAAATTGAGCTTGAAATATTAATAATCCGAGACAGATAAAACTAAAAGACTAATAATTAGCTTAAACCCTTCTAATTTGATAAACTACGTAAGATAAATGCAATCAAATTTGTTAAACTTGAGTCTAATTCAATTTAAAGATTTTTTTCCTTATACTAAAATATGAAAGTTTTGAATTTTCCACCCTACATAATTATTGAACTAAAAAAACCATTGAAACTTGAAGTTAGTTCATGATCATGAAATTTAAAATGAATCTAACACAAAAAAAATTCACAAGTCAAACATGATGTTGGAGATAGAGAGACAAAGATTAGTAATTATGTACTATGTAATATAATATTACCTACTTTGGGGGCAGTGTGCCCTATCACAAGAGTTAAATAATTATAACAAAATACTTATTATTAGACTCCCTCTACCGTGACTCATGTACAACTCACTCTTTTAGCTTCAACTTAGACTCCCCTAAGTTTAGATCCCCTAACTTCCACAAAGATGCTTTCGCCCAGCTTTGTTTGAGACCCCATTAAATAGACGTACCTAGGCTTCCCTTAAGTTTGAGCTCCCTTCACCTATATTTATGAAATAGCTTCTCTCAAGCTAAGTATGAGATCCCTTCAATACAAAATAACTTAGCTTTCCCTAAGTGTGTGATACACTCTTTTTCACTTACAGTGAATGATAGTAGTTGTAACCACTTCAGCAATGAGGTTTAGTCTAAATGAAAAGACTTAACGTGAACAATCTCAAAAAAAATATAAGACCACACAATCTTATTCAAATGGGCCAACCCTAAAAGAGATAAAGTCAGACTATATATATGATACAAGCTCGAGAAGATCTTTAAGGACGAAAAATTATAATCTCCTCATATCAGCATAGCACGCCGTAATAAATATATATATATATATATATATATATATATATATATTTCCAGACAGATTCTGCGCAACATGAAATAATATGCTTGACATTTCTTAAGACAAAAATCAGCCAATGTGCAGTAATGCATGAGCTGATAATTAGTGAATAATATATAACCAAACAAAAAGTTTTTGGCAACAGCTTGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAGGAAGATCCAATGAATTACGAGGTTGTTGGAGCTGACCAAAACATGAACACCACCAGGTATTATTTACTTATACGAACAAATATTAAACATAATATATATGTATATGATTCTTTATAA

mRNA sequence

ATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCTTGTGAGCTCTCTGTGCTTTGTGATGTTGATGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTCTTTGAATTTGGCAGCACTGACATGAACAAAATCCTTGAGAAGTATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGAGTGACATACAGATAGAGGAGGTGTCAAAGCTCAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAGCAGTTGGACAAAACTCTTTCACACGCTAGACAGCGGAAGGCTGAGATAATGCTTCAAAAGTTAGCAGACTTGCACAAAATGCTTGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAGGAAGATCCAATGAATTACGAGGTTGTTGGAGCTGACCAAAACATGAACACCACCAGGTATTATTTACTTATACGAACAAATATTAAACATAATATATATGTATATGATTCTTTATAA

Coding sequence (CDS)

ATGGGAAGGGGAAAAGTAGTGCTTGAGAGAATAGAGAACAAAGTGAATCGTCAAGTTACCTTCTCAAAACGAAGAAATGGGTTATTGAAGAAGGCTTGTGAGCTCTCTGTGCTTTGTGATGTTGATGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTCTTTGAATTTGGCAGCACTGACATGAACAAAATCCTTGAGAAGTATCACCAGCGATGTTACAGCTCTGGATCAAGCACCAATCTTGATGAGAGTGACATACAGATAGAGGAGGTGTCAAAGCTCAGAGCCAAATATGAATCTCTTCAGCGTTCCCATAGGAACTTTCTTGGAGAAGAACTTGAACCACTGAACCTAAAAGAGTTGCATAATCTTGAGAAGCAGTTGGACAAAACTCTTTCACACGCTAGACAGCGGAAGGCTGAGATAATGCTTCAAAAGTTAGCAGACTTGCACAAAATGCTTGAAGAAGAACAACAATGTATGCAAGAAAAGGAAGGTGGCGAGGAAGATCCAATGAATTACGAGGTTGTTGGAGCTGACCAAAACATGAACACCACCAGGTATTATTTACTTATACGAACAAATATTAAACATAATATATATGTATATGATTCTTTATAA

Protein sequence

MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGSTDMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKMLEEEQQCMQEKEGGEEDPMNYEVVGADQNMNTTRYYLLIRTNIKHNIYVYDSL
Homology
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BLAST of HG10012365 vs. NCBI nr
Match: XP_038886448.1 (agamous-like MADS-box protein MADS3 [Benincasa hispida])

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-87
Identity = 176/204 (86.27%), Postives = 184/204 (90.20%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFS+RGKLFEFGST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSSRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQRCYSSGSSTNLDESDIQIEEV+KLRAKYESL+RS+RNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSSTNLDESDIQIEEVAKLRAKYESLRRSNRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM--------------LEEEQQCMQEKE 180
           ELHNLEKQLDKTLSH RQRKAEIMLQKLADL KM              LEEEQQCMQEKE
Sbjct: 121 ELHNLEKQLDKTLSHTRQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEEEQQCMQEKE 180

Query: 181 GGEEDPMNYEVVGADQNMNTTRYY 191
            GEEDPMNY++VGAD NMN  RY+
Sbjct: 181 DGEEDPMNYKLVGADPNMNIPRYF 204

[Close]
BLAST of HG10012365 vs. NCBI nr
Match: XP_008439145.1 (PREDICTED: MADS-box transcription factor 17-like [Cucumis melo])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 171/208 (82.21%), Postives = 184/208 (88.46%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQ+CY+SGS+TNLDESDIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM----------------LEEEQQCMQE 180
           ELHNLEKQLDKTLS ARQRKAEIMLQKLADLHKM                 +++QQC+QE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 KEGGEEDPMNYEVVGADQ-NM-NTTRYY 191
           +EGGEEDP NYEVV AD  NM NTTRY+
Sbjct: 181 QEGGEEDPKNYEVVRADDPNMVNTTRYF 208

[Close]
BLAST of HG10012365 vs. NCBI nr
Match: XP_011651126.1 (agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical protein Csa_009943 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 169/202 (83.66%), Postives = 179/202 (88.61%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQ+CY+SGS+TNLDESD+QIEEVSKLRAKYESLQRSHRNFLGEELEPL LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLTLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM----------LEEEQQCMQEKEGGEE 180
           ELHNLEKQLDKTLS ARQRKAEIMLQKLADL KM          L+ + +  QE+EGGEE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLRKMEQDLGDQNTQLKSKLEKDQEQEGGEE 180

Query: 181 DPMNYEVVGADQ-NM-NTTRYY 191
           DP NYEVV AD  NM NTTRYY
Sbjct: 181 DPKNYEVVRADDPNMINTTRYY 202

[Close]
BLAST of HG10012365 vs. NCBI nr
Match: XP_022141193.1 (MADS-box transcription factor 6-like [Momordica charantia])

HSP 1 Score: 288.9 bits (738), Expect = 3.5e-74
Identity = 159/204 (77.94%), Postives = 173/204 (84.80%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQRCYSSGS++NLDESD+QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM--------------LEEEQQCMQEKE 180
           ELHNLEKQLDKTLS ARQRKAEIMLQ+LA+L KM              LEE Q+ +Q+ E
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 GGEEDP----MNYEVVGADQNMNT 187
            G+ DP     NYEVVG + NM++
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNMSS 204

[Close]
BLAST of HG10012365 vs. NCBI nr
Match: KAA0033595.1 (MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MADS-box transcription factor 17-like [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 7.3e-64
Identity = 131/140 (93.57%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQ+CY+SGS+TNLDESDIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSHARQRK 141
           ELHNLEKQLDKTLS ARQRK
Sbjct: 121 ELHNLEKQLDKTLSQARQRK 140

[Close]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-45
Identity = 95/153 (62.09%), Postives = 122/153 (79.74%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
              K LE+Y + CY+   +    E+    +EVSKL+AKYESLQR+ R+ LGE+L PL++K
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSVK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHK 154
           EL NLEKQL+  L+ ARQRK ++M++++ DL +
Sbjct: 121 ELQNLEKQLEGALAQARQRKTQMMIEQMEDLRR 153

[Close]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-43
Identity = 100/182 (54.95%), Postives = 133/182 (73.08%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILEKYHQRCYSSGSSTN-LDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNL 120
            + K LE+Y   CY++  S N L E+     E+SKL+AK+E+LQR+ R+ LGE+L PL++
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 120

Query: 121 KELHNLEKQLDKTLSHARQRKAEIMLQKLADL---HKMLEEEQQCMQEKEGGEEDPMNYE 179
           KEL  LEKQL+  LS ARQRK ++M++++ +L    + L E  + ++ K   E    NY 
Sbjct: 121 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 180

[Close]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 103/180 (57.22%), Postives = 135/180 (75.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILEKYHQRCYSS-GSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            +NK LEKY+  CY++ GS++ L   + Q   +E+S+L+ K E LQRS R+ LGE+L PL
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSHARQRKAEIMLQKLADL---HKMLEEEQQCMQEKEGGEEDPMN 175
           ++KEL  LEKQL+ +LS ARQRK +IM++++ DL    + L E  + ++ K   E D  N
Sbjct: 121 SIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSN 180

[Close]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41
Identity = 90/155 (58.06%), Postives = 120/155 (77.42%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +E+Y+ RCY+   S N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDKTLSHARQRKAEIMLQKLADLHK 154
           +KEL  LE+QL+  L+  RQRK ++M++++ DL K
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRK 154

[Close]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39
Identity = 98/170 (57.65%), Postives = 121/170 (71.18%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALI+FS RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  D-MNKILEKYHQRCYSS-GSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
             MNK LE+Y +  Y S  +S    E++   +E  KL+AK + LQRSHRN LGE+L  L+
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120

Query: 121 LKELHNLEKQLDKTLSHARQRKAEIMLQKLADLHK---MLEEEQQCMQEK 166
            KEL  LE QLDK+L   R  K + ML +LADL K   ML E  + ++ K
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTK 170

[Close]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match: A0A1S3AY43 (MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.4e-82
Identity = 171/208 (82.21%), Postives = 184/208 (88.46%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQ+CY+SGS+TNLDESDIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM----------------LEEEQQCMQE 180
           ELHNLEKQLDKTLS ARQRKAEIMLQKLADLHKM                 +++QQC+QE
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQKLADLHKMEQDLGDQNNQLKSKLEKDQDQQCVQE 180

Query: 181 KEGGEEDPMNYEVVGADQ-NM-NTTRYY 191
           +EGGEEDP NYEVV AD  NM NTTRY+
Sbjct: 181 QEGGEEDPKNYEVVRADDPNMVNTTRYF 208

[Close]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match: A0A6J1CJS1 (MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011649 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 159/204 (77.94%), Postives = 173/204 (84.80%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENKVNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQRCYSSGS++NLDESD+QIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKM--------------LEEEQQCMQEKE 180
           ELHNLEKQLDKTLS ARQRKAEIMLQ+LA+L KM              LEE Q+ +Q+ E
Sbjct: 121 ELHNLEKQLDKTLSQARQRKAEIMLQRLAELRKMEQDLGDQNTELKSKLEEGQRRLQQSE 180

Query: 181 GGEEDP----MNYEVVGADQNMNT 187
            G+ DP     NYEVVG + NM++
Sbjct: 181 DGQGDPEEQVPNYEVVGEEPNMSS 204

[Close]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match: A0A5D3DF02 (MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00130 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 131/140 (93.57%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           DMNKILE+YHQ+CY+SGS+TNLDESDIQIEEVSKLRAKYESLQRS+RNFLGEELEPL+LK
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYRNFLGEELEPLSLK 120

Query: 121 ELHNLEKQLDKTLSHARQRK 141
           ELHNLEKQLDKTLS ARQRK
Sbjct: 121 ELHNLEKQLDKTLSQARQRK 140

[Close]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match: A0A6J1E935 (MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430519 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.9e-64
Identity = 135/192 (70.31%), Postives = 155/192 (80.73%), Query Frame = 0 

Query: 2   GRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGSTD 61
           G+GKVV+ERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALI+FS+RGKLFEFGSTD
Sbjct: 15  GKGKVVVERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIMFSSRGKLFEFGSTD 74

Query: 62  MNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLKE 121
           MNKILE+YH RCY++GS+TNL  + +QIEEVSKLRAKYESLQRSHRN +GEELE L++KE
Sbjct: 75  MNKILERYHHRCYNTGSTTNLHHTHVQIEEVSKLRAKYESLQRSHRNLVGEELEALSIKE 134

Query: 122 LHNLEKQLDKTLSHARQRKAEIMLQKLADLHKMLE-------------EEQQCMQEKEGG 181
           LH LEKQLDKTLS  R RK EIMLQK+AD  KM +             E Q+CMQ+ E  
Sbjct: 135 LHTLEKQLDKTLSQTRHRKVEIMLQKIADTRKMEQELGDVNTQLKSKVEGQECMQQNEEQ 194

[Close]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match: A0A6P9EZQ4 (agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC108998622 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.2e-53
Identity = 118/187 (63.10%), Postives = 144/187 (77.01%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+VVLERIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKLF+FGST
Sbjct: 1   MGRGRVVLERIENKINRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLFQFGST 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
           +MNKILE+Y Q CYS  +      +     E+++LRAKYESLQRS R+ LGE+LEPLNLK
Sbjct: 61  EMNKILERYRQCCYSQDTDVVEQGTQTLYREITRLRAKYESLQRSQRHMLGEDLEPLNLK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKMLEEEQQCMQEKEGGEEDPMNYEVVGA 180
           EL NLEKQLDKTLS ARQRK +IML +L +L + +EE+ Q + E   G  +P     V  
Sbjct: 121 ELQNLEKQLDKTLSRARQRKTQIMLDRLEELRQKIEEKGQRVHEAIQGPGNPTTQAPVDC 180

Query: 181 DQNMNTT 188
            + ++T+
Sbjct: 181 FEQLHTS 187

[Close]
BLAST of HG10012365 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 )

HSP 1 Score: 171.0 bits (432), Expect = 9.9e-43
Identity = 90/155 (58.06%), Postives = 120/155 (77.42%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V ++RIENK+NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPLN 120
            +   +E+Y+ RCY+   S N  E   Q   +EV+KL++KYESL R++RN LGE+L  + 
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMG 120

Query: 121 LKELHNLEKQLDKTLSHARQRKAEIMLQKLADLHK 154
           +KEL  LE+QL+  L+  RQRK ++M++++ DL K
Sbjct: 121 VKELQALERQLEAALTATRQRKTQVMMEEMEDLRK 154

[Close]
BLAST of HG10012365 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 88/154 (57.14%), Postives = 111/154 (72.08%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +V+LI+FS RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  -DMNKILEKYHQRCYSSGSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
            +M K LE+Y +  Y S    N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSHARQRKAEIMLQKLADL 152
           N KEL  LE+QLD +L   R  K + ML +L+DL
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDL 154

[Close]
BLAST of HG10012365 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-38
Identity = 92/171 (53.80%), Postives = 118/171 (69.01%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEF-GS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALIIFS RGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILEKYHQRCYSSGSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
           ++M K L++Y +  Y S    N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSHARQRKAEIMLQKLADL---HKMLEEEQQCMQEK 166
           N KEL  LE+QLD +L   R  K + ML +L+DL    +ML E  + +  K
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMK 171

[Close]
BLAST of HG10012365 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-38
Identity = 92/171 (53.80%), Postives = 118/171 (69.01%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEF-GS 60
           MGRG+V L+RIENK+NRQVTF+KRRNGLLKKA ELSVLCD +VALIIFS RGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILEKYHQRCYSSGSSTNLDESDIQ--IEEVSKLRAKYESLQRSHRNFLGEELEPL 120
           ++M K L++Y +  Y S    N    +++    E  KL+ +YE+LQR  RN LGE+L PL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NLKELHNLEKQLDKTLSHARQRKAEIMLQKLADL---HKMLEEEQQCMQEK 166
           N KEL  LE+QLD +L   R  K + ML +L+DL    +ML E  + +  K
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMK 171

[Close]
BLAST of HG10012365 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 )

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-37
Identity = 78/157 (49.68%), Postives = 119/157 (75.80%), Query Frame = 0 

Query: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKV ++RIENK+ RQVTFSKR++GLLKKA ELSVLCD +V+LIIFST GKL+EF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  DMNKILEKYHQRCYSSGSSTNLDESDIQIEEVSKLRAKYESLQRSHRNFLGEELEPLNLK 120
            + + +E+Y++   +   +  L+++    +EV+KL+ KYESL R+HRN +GE+LE +++K
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIK 120

Query: 121 ELHNLEKQLDKTLSHARQRKAEIMLQKLADLHKMLEE 158
           EL  LE+QL+  LS  R++K ++M++++ +L +   E
Sbjct: 121 ELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERE 157

The following BLAST results are available for this feature:
BLAST of HG10012365 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886448.13.6e-8786.27agamous-like MADS-box protein MADS3 [Benincasa hispida][more]
XP_008439145.11.3e-8182.21PREDICTED: MADS-box transcription factor 17-like [Cucumis melo][more]
XP_011651126.11.6e-7983.66agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical... [more]
XP_022141193.13.5e-7477.94MADS-box transcription factor 6-like [Momordica charantia][more]
KAA0033595.17.3e-6493.57MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MAD... [more]
BLAST of HG10012365 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LLR12.1e-4562.09Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=... [more]
Q6EU391.1e-4354.95MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS... [more]
Q7XUN21.5e-4357.22MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
P293861.4e-4158.06Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ... [more]
Q396853.8e-3957.65MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1[more]
BLAST of HG10012365 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3AY436.4e-8282.21MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE... [more]
A0A6J1CJS11.7e-7477.94MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D3DF023.5e-6493.57MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1E9357.9e-6470.31MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114305... [more]
A0A6P9EZQ42.2e-5363.10agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC1... [more]
BLAST of HG10012365 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45650.19.9e-4358.06AGAMOUS-like 6 [more]
AT3G02310.11.9e-3857.14K-box region and MADS-box transcription factor family protein [more]
AT5G15800.14.3e-3853.80K-box region and MADS-box transcription factor family protein [more]
AT5G15800.24.3e-3853.80K-box region and MADS-box transcription factor family protein [more]
AT3G61120.12.1e-3749.68AGAMOUS-like 13 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..165
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..165
NoneNo IPR availablePANTHERPTHR48019:SF70TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1coord: 1..165
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 59.69
coord: 23..38
score: 82.84
coord: 3..23
score: 65.94
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 2.6E-37
score: 140.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 9.1E-26
score: 89.2
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 30.697649
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 89..164
e-value: 6.7E-19
score: 67.9
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 85..173
score: 12.875414
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 13..94
e-value: 1.6E-28
score: 100.6
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..85
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..78
e-value: 3.04402E-42
score: 135.372

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10012365.1HG10012365.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding