HG10012321 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012321
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	25.3 kDa vesicle transport protein
Location	Chr01: 20072999 .. 20076616 (+)
RNA-Seq Expression	HG10012321
Synteny	HG10012321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGCTTACAATGGTTGGAAGAGTTAGAGATGGATTGCCAATTGCACAAGGTATTAGGTACGTTAATGAAGAGAATGATGATGTTTTGGGGTACAAGAAACAAACTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTATCTTCTTCAAAAATGGCCATTCTAATGCATCATCACTCTTTCATGTACATCCCCTTCTCTTTCTTTCGATATCAATATATTGGTTTCTTTCTCATTCACTTCTTGAAGCCTATCGCAGTCTATCGCTGATAGACTGTGAAATTTTTCTATATTTATAAATACTTTGATATTTTTTCTATTTATAATAATTTTTCCCATATTTATGGAGTGTGAGAATTTGAATGCTTGATTTCTTAGTTGAAGGAACTATGCTTAGGGTTGATGAAAACGACAAGTGTGATAATCTTACAAAAAAAAATGTGTATAGGTACTCGAATCTTACAAAACCCACCTTAGGGGGTGGGGCCAAAAATTTTCTTAGGAAGTTTAAGCTTGTGTTTGGTTAACCATTTGGTTTTTTATTTTTAATTTTTGGAAATTAAGCCTATAAACACTCCTTTCGCCTCTAAATTTCTTTTTTCTTTTTTTATCTACTTTTACCATAAACCAAACTTGAAAACTAAAAAAAGTTTTTTTTTTTGAGATTTGGTTAAGAATTCAACTCTTGTACTTAATTAACTAAGATAAAAATCATGGTAAGAAATTGGGAGAAAATTAATAGGCTTAAATTTTCAAAAACCAAAAAAAAAAAAAAAAACAAAATTGATTATTAAACAAGACCAGCTTAGATTATCCATTTTTAAATTGAAAACTAACCTACAAAAATAATCAAAATTAGCTACATAATTCTAAACTTCTACATATATGTTGGTTTTGTTTTTGTTTTTGTTTTTTTTTTATTTGTGTATAGTTACTTGGTGGAGAATGGTGTGTGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTGTCCATTACTTGCAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCCCTAATTAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGGTAACCTTTCTCAACCCTCTTCATACATATTTGTTTAGTTTCTTTCCAAAATGTGTTCATCAAGGAAACATTATTTTTCTACCTTCTCCATAAATATGCTGTTTTCTTTATCTTTTTAAAGAAAAAACATTTGATGCCTAGCTCCCCCAACTGATCAATAATCATGAAAAGAAAAGAATATATATCAACTTTGTAATAACTTAATATATGTTTGTTATTCTCATTTTGATCCCTACTTTACTTCCTTCCAAAGAAAAGTCTCAATGGTTTAATTTACTTACCGTGAAGCCATTTAATTTTTCATCTTTAGTTTTTGAAAATTAAGCCTATAAATTAAAATTTCTTCCACTTCTAAATTTCTTACTTAATTTTCTACTTTAATTCTACAAGTATTTTCAAAACCCAACCCAAATTTTGAAAAATAAAATAATTTTTTATAAAAAAAAATTGTTTTTGTTGTTGGAATTTAACTTTTTTTTCTTTGAACAAGATACTAGTGAGAGAATCAGTAGGTGTACCAGTATATCTCAATTAGTTTGACACATCCTTAGCACCATCTCAACTAGGTTGTTGGAATTTAGCTTAAAATTCAACTCTTTTACTTTCAAAAATATGAAAATTATTGTATGAAATTAAGATGAAATAGACTTATTTTTTTTTCAAAAACCAAATTAAAAAAATCAAATGATTACCAAACAGAACTTAAAGTTTTCTTCTAATAGTCTCCTTAATATTCTTTTTTTTAACGTATTTGGATTGAAAGACTAATTAACAGATATTTGATATATTGTAGATAGTATTATTAGCAATATTAGGAAACAATACATTGATACAAGAACACAGGCCAATCTATGCAAGCTCAATGCAAATCGTCGACAGGCTGATCTAGACATACCCACTTGTTCGCTTTCAGAGATTGTAGAGAGAAGGAGAAAATTGGGTAACTATTTTTTTTTTCCTTTTTAGATGATTTAATATTAAATTTACATTCATCCATGAACTTAAGTTTCTGGATCAATGGGTGATTTAACAATTCACTCATATATCTTATAAAGAATTGTAAGCCGAGGTCTCTCGATTCTTGGATCAATATTTTTTAAATTTAGAATACATATATGGACTTCATGTAGGACTGACGACAGGGTGGGACGAGGCTAGTGGAGGCCCCCATCCCCGTCCCTGCATGGTAAAACAATCCCCATCTCCGTTATTTGGGGCCGGGATTGGGGACTCCCCCCCTCTTTCATAATTTTTTTAATTTGTAATTTTTTATTGTAAATTTTTTAAATAATACTTTTAAATTGGGTTCAAGCCTTTTTTTTTTTTCTATGTAAATTGCATTTTCTTAGTGAAATTTTTTTTTATAAACACCAATGCATACAACTTACACTTGAAATTTATAAAAAGTTAAAAACAATTCCTTTTTCTTTAATAAAGAGAAATGAAAGGAAAATTGAATTTTCTTTTTAAATGACCATTCAATTGGCATGTTTTCGTATATATAATATAATATATATAATAATAAAAGATACCTTATATATATTTTTAAAAAGTATTTAAATATTAAATGGAGAGGGATCCCCTCCTGGACTCATTTTGTGTCCCCGATTTAACCCCATCTCTTATCAAACTGGGATTTTCCGCAGAAACTTTTGCCAACCCTATTCATGGGCCCTTATGCTATATTTGATCAACATAGGTTTCCATTTCAAAACCACTTCGATTATGAAATGAGTATTCACATCTTTTATTAAATTTGTGAAGTCTCTCTAAGGATTCTCAAAATCAAGTCTTGAAACTTTGAAAACATGGTGCGTCCACACAACTTTCAATGTTGTGTGTAATAGGTTCTAGACGTATTAAAAAAAGAAAAAAAAAGAATCGATCTAATAAATATACAAAATTGAATTTTACATCTAATTGAACCTTAAAGATTTGATCCGTGTCTAGTAAGTTTGTGAATTTTAAAAATTATTGAATAGATCAATAATTTGTTAGCACACAAAAATTTAAGGACGGACACAAAATTGAGAATTTGAAACTTATTAGTATTAGATACTTTTTAACATGTAGTACTAAATAAACACAATTGGACTAAAGTTGTAATTTAAGAAATGATTTATTTTGGTTGGTATGTTTGAAAAATCACATAATATAATATTAAGATTATGTTACATTAATATAATTCAGATATGGTGGAAAGATCAATAATGTGTAATACGAATTCTCAAGGTGCATCCTCCTCCATTTGGGGGTCTCCCTGTCTCGAGGTAAGTTGAAGTTGATGGATTAATTAGTTTAATTTTAATTATTAGCAGTCAATTAAAGCTTAATTAATTTTTGTTTTTGTTGATGTTATTATATATATGACAGGAAATTGGTCTCAAATGGACGCCAGTGGTTATAACTTTTGCCGTAGTGCTTATCATTCTATGGGCTTCCTTTCTTCTCTTCGACCTCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA

mRNA sequence

ATGGTGAAGCTTACAATGGTTGGAAGAGTTAGAGATGGATTGCCAATTGCACAAGGTATTAGGTACGTTAATGAAGAGAATGATGATGTTTTGGGGTACAAGAAACAAACTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTATCTTCTTCAAAAATGGCCATTCTAATGCATCATCACTCTTTCATTTACTTGGTGGAGAATGGTGTGTGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTGTCCATTACTTGCAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCCCTAATTAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGATATGGTGGAAAGATCAATAATGTGTAATACGAATTCTCAAGGTGCATCCTCCTCCATTTGGGGGTCTCCCTGTCTCGAGGAAATTGGTCTCAAATGGACGCCAGTGGTTATAACTTTTGCCGTAGTGCTTATCATTCTATGGGCTTCCTTTCTTCTCTTCGACCTCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA

Coding sequence (CDS)

ATGGTGAAGCTTACAATGGTTGGAAGAGTTAGAGATGGATTGCCAATTGCACAAGGTATTAGGTACGTTAATGAAGAGAATGATGATGTTTTGGGGTACAAGAAACAAACTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTATCTTCTTCAAAAATGGCCATTCTAATGCATCATCACTCTTTCATTTACTTGGTGGAGAATGGTGTGTGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTGTCCATTACTTGCAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCCCTAATTAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGATATGGTGGAAAGATCAATAATGTGTAATACGAATTCTCAAGGTGCATCCTCCTCCATTTGGGGGTCTCCCTGTCTCGAGGAAATTGGTCTCAAATGGACGCCAGTGGTTATAACTTTTGCCGTAGTGCTTATCATTCTATGGGCTTCCTTTCTTCTCTTCGACCTCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAATAGAAAATTGTTTCACTAA

Protein sequence

MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHHHSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDMVERSIMCNTNSQGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKLFH

Homology

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BLAST of HG10012321 vs. NCBI nr
Match: XP_016898990.1 (PREDICTED: 25.3 kDa vesicle transport protein isoform X3 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 5.3e-93
Identity = 173/191 (90.58%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDMV 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFD+ 
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDIE 120

Query: 121 ERSIMCNTNSQGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNE 180
           ERS  CNTNSQG SSSIWGSP LEEIGLKWTP+V+TF VVLI+LWASFLLFD+SLSHHN+
Sbjct: 121 ERS-RCNTNSQGTSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQ 180

Query: 181 FVILYNNRKLF 192
           FVILYNNRKLF
Sbjct: 181 FVILYNNRKLF 190

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BLAST of HG10012321 vs. NCBI nr
Match: XP_008439222.1 (PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 171/239 (71.55%), Postives = 178/239 (74.48%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDM- 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFD  
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 -----------------------------------------------VERSIMCNTNSQG 180
                                                          +E    CNTNSQG
Sbjct: 121 ISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRCNTNSQG 180

Query: 181 ASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKLF 192
            SSSIWGSP LEEIGLKWTP+V+TF VVLI+LWASFLLFD+SLSHHN+FVILYNNRKLF
Sbjct: 181 TSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 239

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BLAST of HG10012321 vs. NCBI nr
Match: XP_038875892.1 (25.3 kDa vesicle transport protein [Benincasa hispida])

HSP 1 Score: 327.8 bits (839), Expect = 6.3e-86
Identity = 172/241 (71.37%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRY+NEENDDVLGYKKQ EFILKEISRGTLSSSKMAILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYINEENDDVLGYKKQAEFILKEISRGTLSSSKMAILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKF--- 120
           H FIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKE G+F+ ALINKLIKPYS  +F   
Sbjct: 61  HCFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEVGEFEYALINKLIKPYSLTQFDGI 120

Query: 121 ----------------------------------------------DMVERSIMCNTNSQ 180
                                                         DMVERS+  NTNSQ
Sbjct: 121 ISNIRKQYIDTRTQANLCKLNANRRQADPDMLTCSLSEILERRRKLDMVERSMCNNTNSQ 180

Query: 181 GASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKLF 193
           GASSSIWGSPCL+EIGLKWTP+V+TF VVLIILWASFLLFD+SLS HNEFVILYNNRKLF
Sbjct: 181 GASSSIWGSPCLQEIGLKWTPMVVTFGVVLIILWASFLLFDISLSQHNEFVILYNNRKLF 240

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BLAST of HG10012321 vs. NCBI nr
Match: XP_011651150.1 (25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypothetical protein Csa_011539 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.5e-84
Identity = 171/241 (70.95%), Postives = 179/241 (74.27%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFL----- 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFL     
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 --------------------------------------------KFDMVERS-IMCNTNS 180
                                                       KFDMVERS    NTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 QGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKL 192
           +G S SIWGSP LEEIG+KWTP+V+TF VVLI+LWASFLLFD+SLSHHN+FVILYNNRKL
Sbjct: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKL 240

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BLAST of HG10012321 vs. NCBI nr
Match: XP_022968542.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77
Identity = 158/242 (65.29%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDVLGYK+Q EFILKEISRG LSS KMAI MHH
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKF--- 120
           HSFIYL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N L+KPYSF KF   
Sbjct: 61  HSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFDNI 120

Query: 121 -----------------------------------------------DMVERSIMCNTNS 180
                                                          DMVERSI CN N 
Sbjct: 121 ISNIRKRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSI-CNAN- 180

Query: 181 QGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKL 193
              SSSIW    ++EIGLKWTPVV+TF VVL++LWASFLLFD+SLSHHN+FVILYNNRKL
Sbjct: 181 ---SSSIWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKL 237

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BLAST of HG10012321 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 50/118 (42.37%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVK+T++ RV DGLP+A+G+    +  D  + YK+Q + + K +SRG   +S+M++    
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 119
           + F Y++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+F+KFD
Sbjct: 61  YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFD 117

[Close]

BLAST of HG10012321 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEI-----SRGTLSSSKMA 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ Q + + +++     +R TL +  MA
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMA 60

Query: 61  ILMHHHSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFL 119
                  F Y++E GVCY+ LC++++P+KLA  YL+DLQ EF +     +  + +PYSF+
Sbjct: 61  -------FHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFI 116

[Close]

BLAST of HG10012321 vs. ExPASy Swiss-Prot
Match: O08595 (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus OX=10029 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 8.4e-17
Identity = 44/123 (35.77%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEI-----SRGTLSSSKMA 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ Q + + +++     +R TL +  M 
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLGAGAM- 60

Query: 61  ILMHHHSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFL 119
                 +F Y++E GVCY+ LC++++P+KLA  YL+DL  EF +     +  + +PYSF+
Sbjct: 61  ------TFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFI 116

[Close]

BLAST of HG10012321 vs. ExPASy Swiss-Prot
Match: Q7SXP0 (Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 42/118 (35.59%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MV LTM+ R+ DGLP+A  ++   +   D+  Y+ Q + + ++++    S ++  +    
Sbjct: 1   MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLNE--QSPNRCTLEAGS 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 119
            SF Y++E GVCY+ LC++ +P+KLA  YL+DLQ EF +     +  + +PYSF++FD
Sbjct: 61  MSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFD 116

[Close]

BLAST of HG10012321 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 41/118 (34.75%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ Q + + ++++    S ++  +    
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLEAGA 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 119
            +F Y++E GVCY+ LC++++P+KLA  YL+DL  EF +     +  + +PYSF++FD
Sbjct: 61  MTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFD 116

[Close]

BLAST of HG10012321 vs. ExPASy TrEMBL
Match: A0A1S4DTG2 (25.3 kDa vesicle transport protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.6e-93
Identity = 173/191 (90.58%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDMV 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFD+ 
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDIE 120

Query: 121 ERSIMCNTNSQGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNE 180
           ERS  CNTNSQG SSSIWGSP LEEIGLKWTP+V+TF VVLI+LWASFLLFD+SLSHHN+
Sbjct: 121 ERS-RCNTNSQGTSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQ 180

Query: 181 FVILYNNRKLF 192
           FVILYNNRKLF
Sbjct: 181 FVILYNNRKLF 190

[Close]

BLAST of HG10012321 vs. ExPASy TrEMBL
Match: A0A1S3AYX3 (25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.0e-87
Identity = 171/239 (71.55%), Postives = 178/239 (74.48%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDM- 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFD  
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 -----------------------------------------------VERSIMCNTNSQG 180
                                                          +E    CNTNSQG
Sbjct: 121 ISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRCNTNSQG 180

Query: 181 ASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKLF 192
            SSSIWGSP LEEIGLKWTP+V+TF VVLI+LWASFLLFD+SLSHHN+FVILYNNRKLF
Sbjct: 181 TSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKLF 239

[Close]

BLAST of HG10012321 vs. ExPASy TrEMBL
Match: A0A0A0LBE2 (Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 171/241 (70.95%), Postives = 179/241 (74.27%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDV GYKKQ EFILKEISRGTLS  KM ILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFL----- 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFL     
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 --------------------------------------------KFDMVERS-IMCNTNS 180
                                                       KFDMVERS    NTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 QGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKL 192
           +G S SIWGSP LEEIG+KWTP+V+TF VVLI+LWASFLLFD+SLSHHN+FVILYNNRKL
Sbjct: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKL 240

[Close]

BLAST of HG10012321 vs. ExPASy TrEMBL
Match: A0A6J1HTS6 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467744 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 158/242 (65.29%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDVLGYK+Q EFILKEISRG LSS KMAI MHH
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKF--- 120
           HSFIYL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N L+KPYSF KF   
Sbjct: 61  HSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFDNI 120

Query: 121 -----------------------------------------------DMVERSIMCNTNS 180
                                                          DMVERSI CN N 
Sbjct: 121 ISNIRKRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSI-CNAN- 180

Query: 181 QGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKL 193
              SSSIW    ++EIGLKWTPVV+TF VVL++LWASFLLFD+SLSHHN+FVILYNNRKL
Sbjct: 181 ---SSSIWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKL 237

[Close]

BLAST of HG10012321 vs. ExPASy TrEMBL
Match: A0A6J1FZ74 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449240 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.7e-76
Identity = 155/242 (64.05%), Postives = 171/242 (70.66%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDVLGYK+Q EFILKEISRG LS  KM I MHH
Sbjct: 44  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHH 103

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFDMV 120
           HSFIYL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N L+KPYSFLKFD +
Sbjct: 104 HSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFDNI 163

Query: 121 --------------------------------------------------ERSIMCNTNS 180
                                                             ERSI CN N 
Sbjct: 164 IINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSI-CNAN- 223

Query: 181 QGASSSIWGSPCLEEIGLKWTPVVITFAVVLIILWASFLLFDLSLSHHNEFVILYNNRKL 193
              SSSIW    ++EIGLKWTPVV+TF VVL++LWASFLLFD+SLSHHN+FVILYNNRKL
Sbjct: 224 ---SSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRKL 280

[Close]

BLAST of HG10012321 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.1e-33
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVN-EENDDVLGYKKQTEFILKEISRGTLSSSKMAILMH 60
           MVKLT+VGRV DGLP+AQ   YVN E+N   L YK+Q EF+LK++S+ +L   KM IL+ 
Sbjct: 1   MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD 60

Query: 61  HHSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDD-ALINKLIKPYSFLKFD 120
           HHSF +LVE  +CY+ L DSSYPRKL  +YLQ+L KE  K D+ ALI K+ KPYSF++F 
Sbjct: 61  HHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFG 120

[Close]

BLAST of HG10012321 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-23
Identity = 50/118 (42.37%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVLGYKKQTEFILKEISRGTLSSSKMAILMHH 60
           MVK+T++ RV DGLP+A+G+    +  D  + YK+Q + + K +SRG   +S+M++    
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAVHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 119
           + F Y++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+F+KFD
Sbjct: 61  YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFD 117

The following BLAST results are available for this feature:

BLAST of HG10012321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898990.1	5.3e-93	90.58	PREDICTED: 25.3 kDa vesicle transport protein isoform X3 [Cucumis melo]	[more]
XP_008439222.1	1.7e-86	71.55	PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo]	[more]
XP_038875892.1	6.3e-86	71.37	25.3 kDa vesicle transport protein [Benincasa hispida]	[more]
XP_011651150.1	3.5e-84	70.95	25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypo...	[more]
XP_022968542.1	3.1e-77	65.29	25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10012321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU2	1.8e-22	42.37	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2...	[more]
Q5ZJW4	1.0e-17	37.40	Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1	[more]
O08595	8.4e-17	35.77	Vesicle-trafficking protein SEC22b OS=Cricetulus griseus OX=10029 GN=Sec22b PE=1...	[more]
Q7SXP0	1.9e-16	35.59	Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1	[more]
O08547	1.9e-16	34.75	Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3	[more]

BLAST of HG10012321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTG2	2.6e-93	90.58	25.3 kDa vesicle transport protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3AYX3	8.0e-87	71.55	25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LBE2	1.7e-84	70.95	Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3...	[more]
A0A6J1HTS6	1.5e-77	65.29	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FZ74	1.7e-76	64.05	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of HG10012321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52270.1	5.1e-33	57.38	SNARE-like superfamily protein	[more]
AT1G11890.1	1.2e-23	42.37	Synaptobrevin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 40..120 e-value: 8.1E-16 score: 68.6
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 39..118 e-value: 3.8E-17 score: 62.1
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 6..121 score: 20.810644
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 5..118 e-value: 2.76469E-17 score: 72.2885
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..124 e-value: 4.4E-32 score: 112.7
None	No IPR available	PANTHER	PTHR45837:SF7	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 1..124
None	No IPR available	PANTHER	PTHR45837:SF7	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 127..172
IPR044565	Vesicle-trafficking protein Sec22	PANTHER	PTHR45837	VESICLE-TRAFFICKING PROTEIN SEC22B	coord: 127..172 coord: 1..124
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012321.1	HG10012321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity