HG10012320 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012320
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	remorin
Location	Chr01: 20069803 .. 20071673 (+)
RNA-Seq Expression	HG10012320
Synteny	HG10012320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGATGAGCCCAACAAAGTAGAGTCTCAATCTCCGTCAGAGCCCCCTCTGCCAGCTGCGGCGGAGCCAACCAAAGACGCAGCGGAGGAGAAATCAATTATCCCATTACCCCCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATTGTTGAAAGTAATTTATAAATATAAAGCTCTCAACTTTTTCATTTTTTTTAATGCTTTTTTGAGCTGTTTGGTTGGTGGAAAAAGAATAAAAAAAGGAATGGAATTTTAGAATTTATCTTCCTCTGTTTTCTTTTTCTCTAGAGTTAATCAATCATTTTGGGTGGATAGAAAGAAAAGAGAAGGGAAGATTTTTCAATTTTTTTATTGGGTTTGTGTTTAATTTAATTACATGTTTGGCTCTGTGTTTTTTATTTTTATTTTTATTTTTTTTATGGAATGATAGAGACTCGTAAAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAACCGAGGTGATTAAATGGTGATATGAAATTATTAGTGTCAATAATTTAATTACCAAATGAATAATTGCATTAAATTTCTTTTTGTTGTTTATGATTATTAGATGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAATAGGTACAAATTAAATCTTGTCTTTATTTTCCCATATAGCTGTTTTTTAATTTTTTTTTTGTCTTAAAATTGAAAGATATTTATAGAGAAATTTACAATAAAATTTTGTCCATCAAAAAGTCTAAAAATACTAAAATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGCCTTTTCCAAAATTGCATTTGATTAAATTACAAATTTGTTATAAATATTTGTATCTCATAGGTCTTGAAGTTTAGAAATTATCATATACACTTTTAGTTTTCAAATTTTATGTCGTGTCAATAAACTTTCAATTTTGTACCTAATATTTTTTTATACAAAATTGAAAGTTTATAAATCTATTATATACATAATATTTGAAGTTTAGATATCTATTTAACACAAACTTAAAAGTTCAAGGACTAAATTTGCCATTTAACTTTTTTTGATAAGTTAAATTATAAATTTAGTCTAAGTCCTTATAGTTAGATAAAATTCTCATAAACAGTCCCTATTGTAGAAATTATTTACTATAATTTTTTTAAACTATATAGACTAAATTCTAATTATAAACAATAAGGACTAAATAATTTGCAATTTAACCCTTTTGATTCTATTATTTGCTGCATGTGATTTGAATGGAACTCGTTGAGCAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAACTGTAGAGGCTGAACTGAAACATATCGAGGTAAGAAATCAAAATATATAAAAATGTGTTTATTGGAAGGCCTTGAATTTACCGGAGGCGCCTATGTAATCTGTAATTTAAAATTTCTCTCTAATAATAAAACTGTGTTCTCTTCTTGTTCGTAGACGTAGCTAACACACTGTTAGTGATTCACGTAAATTTCTGTGTGTTGATTTCTCTACTGTTCACGTTATTTGTTTTCTTTGAGTGTCGATTTCGTTACACAAAAAGAGTAATTTTTCGTATTTGTATTTGTATTTGAGAGAAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTTTGATTCACAAATCAGCAGAAGAAAAGAAGGCTGTTATTGAAGCCAAGCGTGGTGAAGAAAAGCTTAAGGCAGAGGAAATTGCAGCCAAATACAGAGCTACTGGAACTGCTCCTAGGAAGATCCTTGGTTGTTTCTAA

mRNA sequence

ATGGCCGCCGATGAGCCCAACAAAGTAGAGTCTCAATCTCCGTCAGAGCCCCCTCTGCCAGCTGCGGCGGAGCCAACCAAAGACGCAGCGGAGGAGAAATCAATTATCCCATTACCCCCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATTGTTGAAAAGACTCGTAAAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAACCGAGATGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAATAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAACTGTAGAGGCTGAACTGAAACATATCGAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTTTGATTCACAAATCAGCAGAAGAAAAGAAGGCTGTTATTGAAGCCAAGCGTGGTGAAGAAAAGCTTAAGGCAGAGGAAATTGCAGCCAAATACAGAGCTACTGGAACTGCTCCTAGGAAGATCCTTGGTTGTTTCTAA

Coding sequence (CDS)

ATGGCCGCCGATGAGCCCAACAAAGTAGAGTCTCAATCTCCGTCAGAGCCCCCTCTGCCAGCTGCGGCGGAGCCAACCAAAGACGCAGCGGAGGAGAAATCAATTATCCCATTACCCCCACCGGAGGAGAAGCCGGCCGATGACTCCAAAGCTCTGGCAATTGTTGAAAAGACTCGTAAAAAAGCAGAGGAGAAAGAGAAAGACAGTGAAGGCTCAATTAACCGAGATGCTGTACTTGCAAGAGTGGCAACAGAGAAGAGATTGTCACTCATTAAAGCTTGGGAAGAGAGTGAAAAATCAAAGGCAGAGAATAGAGCTCACAAAAAGCTATCAGCAATTGGGTCATGGGAGAACAGCAAGAAAGCAACTGTAGAGGCTGAACTGAAACATATCGAGGAAAAATTGGAGAAGAAGAAAGCAGAGTATATAGAGAAAATGAAGAACAAAATAGCTTTGATTCACAAATCAGCAGAAGAAAAGAAGGCTGTTATTGAAGCCAAGCGTGGTGAAGAAAAGCTTAAGGCAGAGGAAATTGCAGCCAAATACAGAGCTACTGGAACTGCTCCTAGGAAGATCCTTGGTTGTTTCTAA

Protein sequence

MAADEPNKVESQSPSEPPLPAAAEPTKDAAEEKSIIPLPPPEEKPADDSKALAIVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPRKILGCF

Homology

[Close]

BLAST of HG10012320 vs. NCBI nr
Match: XP_038875881.1 (remorin-like isoform X2 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-80
Identity = 180/200 (90.00%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSE-PPLPAA---AEPTKDAAEEKSIIPLPPPEEKPADDSKALAIVE 60
           MAADEPNKVESQSPSE PPLPAA    E TKD AEEKSIIPL PPE KPADDSKALA +E
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEVKPADDSKALATIE 60

Query: 61  KTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120
           KT +KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW
Sbjct: 61  KTHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120

Query: 121 ENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAE 180
           ENS KA VEAELK IEEKLEKKKAEYIEKMKNKIALIHKSAEEKKA IEAKRGEEK+KAE
Sbjct: 121 ENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGEEKIKAE 180

Query: 181 EIAAKYRATGTAPRKILGCF 197
           EIAAKYR+TGTAP+KILGCF
Sbjct: 181 EIAAKYRSTGTAPKKILGCF 200

[Close]

BLAST of HG10012320 vs. NCBI nr
Match: XP_008439225.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 1.7e-78
Identity = 177/198 (89.39%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 2   AADEPNKVES-QSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALAIVEKT 61
           ++DEP K+ES +SPSEPP PAAAEPTK D AEEKSIIPLPPPE EKPADDSKALAIVEK+
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  RKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
            +KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEI 181
           SKKA VEAELK IEEKLEKKK EYIEKMKNKIALIHK+AEEKKAVIEAKRGEEKLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPRKILGCF 197
           AAK+RATGTAP+KI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of HG10012320 vs. NCBI nr
Match: KAA0033640.1 (remorin [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 8.4e-78
Identity = 176/198 (88.89%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 2   AADEPNKVES-QSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALAIVEKT 61
           ++DEP K+ES +SP EPP PAAAEPTK D AEEKSIIPLPPPE EKPADDSKALAIVEK+
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  RKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
            +KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEI 181
           SKKA VEAELK IEEKLEKKK EYIEKMKNKIALIHK+AEEKKAVIEAKRGEEKLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPRKILGCF 197
           AAK+RATGTAP+KI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of HG10012320 vs. NCBI nr
Match: XP_038875876.1 (remorin-like isoform X1 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 179/205 (87.32%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSE-PPLPAA---AEPTKDAAEEKSIIPLPPPEEKPADDSKALAIVE 60
           MAADEPNKVESQSPSE PPLPAA    E TKD AEEKSIIPL PPE KPADDSKALA +E
Sbjct: 1   MAADEPNKVESQSPSERPPLPAADSMEERTKDVAEEKSIIPLTPPEVKPADDSKALATIE 60

Query: 61  -----KTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS 120
                +T +KAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS
Sbjct: 61  SFGMIETHEKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS 120

Query: 121 AIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEE 180
           AIGSWENS KA VEAELK IEEKLEKKKAEYIEKMKNKIALIHKSAEEKKA IEAKRGEE
Sbjct: 121 AIGSWENSNKAAVEAELKQIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKADIEAKRGEE 180

Query: 181 KLKAEEIAAKYRATGTAPRKILGCF 197
           K+KAEEIAAKYR+TGTAP+KILGCF
Sbjct: 181 KIKAEEIAAKYRSTGTAPKKILGCF 205

[Close]

BLAST of HG10012320 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 5.0e-70
Identity = 163/187 (87.17%), Postives = 169/187 (90.37%), Query Frame = 0


Query: 12  QSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALAIVEKTRKKAEEKEKDS 71
           Q P   P PA AEPTK D AEEKSIIPL PPE EKPADDSKALAIVEK+ +KAEEKEK+S
Sbjct: 115 QRPLPLPSPAVAEPTKDDVAEEKSIIPLLPPEDEKPADDSKALAIVEKSDEKAEEKEKES 174

Query: 72  EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKATVEAELK 131
           EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKA VEAELK
Sbjct: 175 EGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAAVEAELK 234

Query: 132 HIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAP 191
            IEEK EKKK E+IEKMKNKIA IHK AEEKKAVIEAKRGEEKLKAEEIAAK+RATGTAP
Sbjct: 235 QIEEKFEKKKGEHIEKMKNKIASIHKKAEEKKAVIEAKRGEEKLKAEEIAAKHRATGTAP 294

Query: 192 RKILGCF 197
           +KI GCF
Sbjct: 295 KKIFGCF 301

[Close]

BLAST of HG10012320 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55
Identity = 137/201 (68.16%), Postives = 161/201 (80.10%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSEPPLPAAAEPTKD-AAEEKSII--PLPPP--EEKPADDSKALAIV 60
           MA  E  KVE   P+ PP P   E  K+  A+EK+I+   LPPP  E++  DDSKAL +V
Sbjct: 1   MAELEAKKVEIVDPA-PPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVVV 60

Query: 61  EKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGS 120
           E   K  E  ++  EGSI+RDAVLARVATEKR+SLIKAWEESEKSKAEN+A KK+SAIG+
Sbjct: 61  E--TKAPEPADEKKEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGA 120

Query: 121 WENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKA 180
           WENSKKA +EAELK +EE+LEKKKAEY EKMKNKIAL+HK AEEK+A+IEAKRGE+ LKA
Sbjct: 121 WENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKA 180

Query: 181 EEIAAKYRATGTAPRKILGCF 197
           EE+AAKYRATGTAP+KILG F
Sbjct: 181 EELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of HG10012320 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.1e-51
Identity = 130/206 (63.11%), Postives = 158/206 (76.70%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSEP-PLP--------AAAE--PTKDAAEEKSIIPLPPPEEKPADDS 60
           MA +EP KV +++ SEP P P        AAA+  P +       ++P P P E+  +DS
Sbjct: 1   MAEEEPKKV-TETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDS 60

Query: 61  KALAIVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKK 120
           K  AIV    K+ EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KK
Sbjct: 61  K--AIVPVVPKEVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKK 120

Query: 121 LSAIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRG 180
           LS+IGSWEN+KKA VEAELK +EE+LEKKKAEY+E+MKNKIA IHK AEEK+A+IEAKRG
Sbjct: 121 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 180

Query: 181 EEKLKAEEIAAKYRATGTAPRKILGC 196
           EE LKAEE+AAKYRATGTAP+K+ GC
Sbjct: 181 EEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of HG10012320 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.8e-46
Identity = 114/194 (58.76%), Postives = 143/194 (73.71%), Query Frame = 0


Query: 3   ADEPNKVESQSPSEPPLPAAAEPTKDAAEEKSIIPLPPPEEKPADDSKALAIVEKTRKKA 62
           AD P    ++ P+  P P  A+ TKD AEEK  I  PPPE+   DDSKAL +VEK  ++ 
Sbjct: 23  ADTPAPAPAEIPAPAPAPTPADVTKDVAEEK--IQNPPPEQ-IFDDSKALTVVEKPVEE- 82

Query: 63  EEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKA 122
               K +  S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++ + +WENSKKA
Sbjct: 83  PAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKA 142

Query: 123 TVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKY 182
            VEA+LK IEE+LEKKKAEY E+MKNK+A IHK AEE++A+IEAKRGE+ LKAEE AAKY
Sbjct: 143 AVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY 202

Query: 183 RATGTAPRKILGCF 197
           RATG  P+   GCF
Sbjct: 203 RATGIVPKATCGCF 212

[Close]

BLAST of HG10012320 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-42
Identity = 115/193 (59.59%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 7   NKVESQSPSEPPLPAAAEPTK---DAAEEKSIIPLPPPEEKPADDSKALAIVEKTRKKAE 66
           +KV+ +SP+   L  A EPT    + A+EK  I  PPP E     SKALA+VEK  ++  
Sbjct: 8   SKVDVESPA--VLAPAKEPTPAPVEVADEK--IHNPPPVE-----SKALAVVEKPIEEHT 67

Query: 67  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAT 126
            K K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKKA 
Sbjct: 68  PK-KASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAA 127

Query: 127 VEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYR 186
           VEA+L+ IEEKLEKKKA+Y EKMKNK+A IHK AEEK+A++EAK+GEE LKAEE+ AKYR
Sbjct: 128 VEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYR 187

Query: 187 ATGTAPRKILGCF 197
           ATG  P+   GCF
Sbjct: 188 ATGVVPKATCGCF 190

[Close]

BLAST of HG10012320 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 71  GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKATVEAELKH 130
           G    +  + +V  E+  S I AW+ +E +K  NR  ++   I  WE  +     A LK 
Sbjct: 192 GGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAWLKK 251

Query: 131 IEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPR 190
            E KLE+K+A+ +EK +N++A   + AEEK+A  EAKRG +  +  E+A   RA G AP 
Sbjct: 252 YERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFMRAVGRAPS 311

Query: 191 K 192
           K
Sbjct: 312 K 312

[Close]

BLAST of HG10012320 vs. ExPASy TrEMBL
Match: A0A1S3AXW2 (remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 8.2e-79
Identity = 177/198 (89.39%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 2   AADEPNKVES-QSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALAIVEKT 61
           ++DEP K+ES +SPSEPP PAAAEPTK D AEEKSIIPLPPPE EKPADDSKALAIVEK+
Sbjct: 3   SSDEPKKIESEESPSEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  RKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
            +KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEI 181
           SKKA VEAELK IEEKLEKKK EYIEKMKNKIALIHK+AEEKKAVIEAKRGEEKLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPRKILGCF 197
           AAK+RATGTAP+KI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of HG10012320 vs. ExPASy TrEMBL
Match: A0A5A7SRU5 (Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.1e-78
Identity = 176/198 (88.89%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 2   AADEPNKVES-QSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALAIVEKT 61
           ++DEP K+ES +SP EPP PAAAEPTK D AEEKSIIPLPPPE EKPADDSKALAIVEK+
Sbjct: 3   SSDEPKKIESEESPLEPPPPAAAEPTKDDVAEEKSIIPLPPPEDEKPADDSKALAIVEKS 62

Query: 62  RKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 121
            +KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN
Sbjct: 63  DEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWEN 122

Query: 122 SKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEI 181
           SKKA VEAELK IEEKLEKKK EYIEKMKNKIALIHK+AEEKKAVIEAKRGEEKLKAEEI
Sbjct: 123 SKKAAVEAELKQIEEKLEKKKGEYIEKMKNKIALIHKTAEEKKAVIEAKRGEEKLKAEEI 182

Query: 182 AAKYRATGTAPRKILGCF 197
           AAK+RATGTAP+KI GCF
Sbjct: 183 AAKHRATGTAPKKIFGCF 200

[Close]

BLAST of HG10012320 vs. ExPASy TrEMBL
Match: A0A0A0L9S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.0e-74
Identity = 170/203 (83.74%), Postives = 181/203 (89.16%), Query Frame = 0


Query: 1   MAADEPNKVE-----SQSPSEPPLPAAAEPTK-DAAEEKSIIPLPPPE-EKPADDSKALA 60
           MA+DEP ++E     S++P  PP PA AEPTK D AEEKSIIPL PPE EKPADDSKALA
Sbjct: 1   MASDEPKQIEPEESPSEAPPPPPPPAVAEPTKDDVAEEKSIIPLLPPEDEKPADDSKALA 60

Query: 61  IVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120
           IVEK+ +KAEEKEK+SEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI
Sbjct: 61  IVEKSDEKAEEKEKESEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAI 120

Query: 121 GSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKL 180
           GSWENSKKA VEAELK IEEK EKKK E+IEKMKNKIA IHK AEEKKAVIEAKRGEEKL
Sbjct: 121 GSWENSKKAAVEAELKQIEEKFEKKKGEHIEKMKNKIASIHKKAEEKKAVIEAKRGEEKL 180

Query: 181 KAEEIAAKYRATGTAPRKILGCF 197
           KAEEIAAK+RATGTAP+KI GCF
Sbjct: 181 KAEEIAAKHRATGTAPKKIFGCF 203

[Close]

BLAST of HG10012320 vs. ExPASy TrEMBL
Match: A0A6J1HZY5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.5e-68
Identity = 158/200 (79.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSEPPLPAAA----EPTKDAAEEKSIIPLPPPEEKPADDSKALAIVE 60
           MA DEP K+ES+ PSEP  P AA    EPTK+ AEEKSII L PPE+ PADDSK L I E
Sbjct: 1   MADDEPKKLESEPPSEPSPPQAAELVEEPTKNVAEEKSIIQLTPPEKTPADDSKPLLIFE 60

Query: 61  KTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSW 120
           KT  K EEK+     SINRDA LARVATEKRL+LIKAWEESEKS+ ENRAHKKLS IGSW
Sbjct: 61  KTEAKTEEKQ---SSSINRDAELARVATEKRLTLIKAWEESEKSRTENRAHKKLSEIGSW 120

Query: 121 ENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAE 180
           E+SKKA VEAELK IEEK EKKKAEY+EKMKNKIALIHK+AEEKKAVIEAKRGEEKLKAE
Sbjct: 121 ESSKKAAVEAELKQIEEKFEKKKAEYVEKMKNKIALIHKAAEEKKAVIEAKRGEEKLKAE 180

Query: 181 EIAAKYRATGTAPRKILGCF 197
           EIAAKYRATGTAP+KILGCF
Sbjct: 181 EIAAKYRATGTAPKKILGCF 197

[Close]

BLAST of HG10012320 vs. ExPASy TrEMBL
Match: A0A6J1CHU8 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.2e-67
Identity = 159/193 (82.38%), Postives = 170/193 (88.08%), Query Frame = 0


Query: 10  ESQSPSE-PPLPAA---AEPTKDAAEEKSIIPLPPPE--EKPADDSKALAIVEKTRKKAE 69
           ES+S S+ PPLPAA    EP+KD AEEKSIIP  PPE  E PAD SKALA+VEKT +KAE
Sbjct: 6   ESESSSKPPPLPAAEPVEEPSKDVAEEKSIIPRTPPEEMENPADHSKALAVVEKTPEKAE 65

Query: 70  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAT 129
           +KEKD+ GSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLS IGSWENSKKA 
Sbjct: 66  QKEKDNGGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSEIGSWENSKKAA 125

Query: 130 VEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYR 189
           VEAELK IEEKLEKKKAEYIEKMKNKIA IHKSAEEKKA+IEA RGE+ LKAEE AAK+R
Sbjct: 126 VEAELKQIEEKLEKKKAEYIEKMKNKIAEIHKSAEEKKAIIEAIRGEDMLKAEETAAKWR 185

Query: 190 ATGTAPRKILGCF 197
           ATGTAP K+LGCF
Sbjct: 186 ATGTAPNKLLGCF 198

[Close]

BLAST of HG10012320 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 201.4 bits (511), Expect = 6.5e-52
Identity = 130/206 (63.11%), Postives = 158/206 (76.70%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSEP-PLP--------AAAE--PTKDAAEEKSIIPLPPPEEKPADDS 60
           MA +EP KV +++ SEP P P        AAA+  P +       ++P P P E+  +DS
Sbjct: 1   MAEEEPKKV-TETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDS 60

Query: 61  KALAIVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKK 120
           K  AIV    K+ EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KK
Sbjct: 61  K--AIVPVVPKEVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKK 120

Query: 121 LSAIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRG 180
           LS+IGSWEN+KKA VEAELK +EE+LEKKKAEY+E+MKNKIA IHK AEEK+A+IEAKRG
Sbjct: 121 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 180

Query: 181 EEKLKAEEIAAKYRATGTAPRKILGC 196
           EE LKAEE+AAKYRATGTAP+K+ GC
Sbjct: 181 EEILKAEELAAKYRATGTAPKKLFGC 201

[Close]

BLAST of HG10012320 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51
Identity = 129/206 (62.62%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 1   MAADEPNKVESQSPSEP-PLP--------AAAE--PTKDAAEEKSIIPLPPPEEKPADDS 60
           MA +EP KV +++ SEP P P        AAA+  P +       ++P P P E+  +DS
Sbjct: 1   MAEEEPKKV-TETVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDS 60

Query: 61  KALAIVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKK 120
           KA+  V     K EE++K  EGS+NRDAVLARV TEKR+SLIKAWEE+EK K EN+A KK
Sbjct: 61  KAIVPVV---PKVEEEKK--EGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKK 120

Query: 121 LSAIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRG 180
           LS+IGSWEN+KKA VEAELK +EE+LEKKKAEY+E+MKNKIA IHK AEEK+A+IEAKRG
Sbjct: 121 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 180

Query: 181 EEKLKAEEIAAKYRATGTAPRKILGC 196
           EE LKAEE+AAKYRATGTAP+K+ GC
Sbjct: 181 EEILKAEELAAKYRATGTAPKKLFGC 200

[Close]

BLAST of HG10012320 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.3e-47
Identity = 103/160 (64.38%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 37  PLPPPEEKPADDSKALAIVEKTRKKAEEKEKDSEGSINRDAVLARVATEKRLSLIKAWEE 96
           P PP +E+ +DDSKA+ +V   ++  E+K+    GS++RDAVL R+  +KR+SLIKAWEE
Sbjct: 19  PSPPSKEEKSDDSKAIVLVVAAKEPTEDKK---VGSVHRDAVLVRLEQDKRISLIKAWEE 78

Query: 97  SEKSKAENRAHKKLSAIGSWENSKKATVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKS 156
           +EKSK EN+A KK+S++G+WENSKKA+VEAELK IEE+L KKKA Y E+MKNKIA IHK 
Sbjct: 79  AEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKE 138

Query: 157 AEEKKAVIEAKRGEEKLKAEEIAAKYRATGTAPRKILGCF 197
           AEEK+A+ EAKRGE+ LKAEE+AAKYRATGTAP K+ G F
Sbjct: 139 AEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of HG10012320 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.3e-47
Identity = 114/194 (58.76%), Postives = 143/194 (73.71%), Query Frame = 0


Query: 3   ADEPNKVESQSPSEPPLPAAAEPTKDAAEEKSIIPLPPPEEKPADDSKALAIVEKTRKKA 62
           AD P    ++ P+  P P  A+ TKD AEEK  I  PPPE+   DDSKAL +VEK  ++ 
Sbjct: 23  ADTPAPAPAEIPAPAPAPTPADVTKDVAEEK--IQNPPPEQ-IFDDSKALTVVEKPVEE- 82

Query: 63  EEKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKA 122
               K +  S++RD  LA ++ EKRLS ++AWEESEKSKAEN+A KK++ + +WENSKKA
Sbjct: 83  PAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKA 142

Query: 123 TVEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKY 182
            VEA+LK IEE+LEKKKAEY E+MKNK+A IHK AEE++A+IEAKRGE+ LKAEE AAKY
Sbjct: 143 AVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKY 202

Query: 183 RATGTAPRKILGCF 197
           RATG  P+   GCF
Sbjct: 203 RATGIVPKATCGCF 212

[Close]

BLAST of HG10012320 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 174.5 bits (441), Expect = 8.5e-44
Identity = 115/193 (59.59%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 7   NKVESQSPSEPPLPAAAEPTK---DAAEEKSIIPLPPPEEKPADDSKALAIVEKTRKKAE 66
           +KV+ +SP+   L  A EPT    + A+EK  I  PPP E     SKALA+VEK  ++  
Sbjct: 8   SKVDVESPA--VLAPAKEPTPAPVEVADEK--IHNPPPVE-----SKALAVVEKPIEEHT 67

Query: 67  EKEKDSEGSINRDAVLARVATEKRLSLIKAWEESEKSKAENRAHKKLSAIGSWENSKKAT 126
            K K S GS +RD +LA +  EK+ S IKAWEESEKSKAENRA KK+S + +WENSKKA 
Sbjct: 68  PK-KASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAA 127

Query: 127 VEAELKHIEEKLEKKKAEYIEKMKNKIALIHKSAEEKKAVIEAKRGEEKLKAEEIAAKYR 186
           VEA+L+ IEEKLEKKKA+Y EKMKNK+A IHK AEEK+A++EAK+GEE LKAEE+ AKYR
Sbjct: 128 VEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYR 187

Query: 187 ATGTAPRKILGCF 197
           ATG  P+   GCF
Sbjct: 188 ATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of HG10012320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875881.1	5.3e-80	90.00	remorin-like isoform X2 [Benincasa hispida]	[more]
XP_008439225.1	1.7e-78	89.39	PREDICTED: remorin [Cucumis melo]	[more]
KAA0033640.1	8.4e-78	88.89	remorin [Cucumis melo var. makuwa]	[more]
XP_038875876.1	1.1e-77	87.32	remorin-like isoform X1 [Benincasa hispida]	[more]
XP_004140777.2	5.0e-70	87.17	remorin [Cucumis sativus]	[more]

BLAST of HG10012320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	2.1e-55	68.16	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	9.1e-51	63.11	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	8.8e-46	58.76	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.2e-42	59.59	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	2.3e-09	37.19	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of HG10012320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXW2	8.2e-79	89.39	remorin OS=Cucumis melo OX=3656 GN=LOC103484075 PE=3 SV=1	[more]
A0A5A7SRU5	4.1e-78	88.89	Remorin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00800 PE=3 S...	[more]
A0A0A0L9S3	8.0e-74	83.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182080 PE=3 SV=1	[more]
A0A6J1HZY5	6.5e-68	79.00	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111467746 PE=3 SV=1	[more]
A0A6J1CHU8	4.2e-67	82.38	remorin-like OS=Momordica charantia OX=3673 GN=LOC111011630 PE=3 SV=1	[more]

BLAST of HG10012320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	6.5e-52	63.11	Remorin family protein	[more]
AT5G23750.2	1.4e-51	62.62	Remorin family protein	[more]
AT3G48940.1	6.3e-47	64.38	Remorin family protein	[more]
AT3G61260.1	6.3e-47	58.76	Remorin family protein	[more]
AT2G45820.1	8.5e-44	59.59	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..74
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 2..196
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 2..196
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 26..82 e-value: 8.2E-23 score: 80.2
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 86..191 e-value: 8.3E-32 score: 109.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012320.1	HG10012320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress