HG10012166 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012166
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAC domain-containing protein
Location	Chr01: 18328783 .. 18330363 (-)
RNA-Seq Expression	HG10012166
Synteny	HG10012166

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTTCAACCGGTTGTTTACCATTGCCATTGAACCATTACGTGGGCGTCAAATTTAGGCCTACCGATCAACAACTTCTTCACTATCTTCATTGTAAGATTTATAGTCTCCCATATTTTCAAGGCGCTATTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGGAAATCTGGCAACTTTTTGAAGGCATTGACGGTGAAGATCTCTATTTCTTCACCAAACTTAAGAGGTCGACAACAAACTTTGGACGTTTGTCAGCACACATCAATCGTAAGATTGGCCTAGCCAATGCCACTTGGAGTGGTGAGAACTCAGCCACTCCAATTTTTGTTGCTGCTGATTCTAATGAGCAAATAATCGGATATACCAAGCGCTTTAGGTACGTTCTTTAGTTTTACTTTTAAGACTCGTTTGGCTTGACTTTTTAAGTGTTTAAATAAATATGTTCATAAGTGCAAAAAAAAGTGTTAACATTTAAAAAGTAAATCCAAACGGGCCCTAGTATTTGCATTAGTCATTTGTGGAATTAATTCGGTTATCTAATTCCAGTTTAATTGTTTGGTTTTGTTATTACTCTTGAACCACATGTGTGTTTCTCCATATCCACCAATCTAAATCTAGTTTTTTAAGGTAGTTGCAATGGGTAGCACTTTTAAGGCTAATAATTTAAGTGTATAACAATATTTTTAAAGAATTATAAATATAACAAAATCTATCAATTATAGATTTCTATTAGTGATAGACTCTATTGTTGATAAATTCCTATCAATGTAAACTCTGAAAGCTGTATCTAAATTTTGTTTATCTGCAAATTGTTTTCCATTGAGTTATATCTGCTAATACTTTGGTTTGATTGCTATATTTGCAGTCGCCCGTTTTTTTAATTGTGTGTGTTTTTGTCCTTGGAAACTTTAAGTTGTAAGGAAACGGTCATGATATTTACTTCATTTGGTATTTTAAAATAAATGATATTATTTTGTAAATTATATTGTAGGTATGAGAATGACCAATTGCAAGAACACCATGGAAAATGGATAATGTATGAATATAGCTTGCATCCAAATTATTTGTTGTGCGAAGGTGCAGATCCCAATTATGTTTTATGTCGGATGAGGAAGAATGAAAGAGCTAAAAGAAAATTAGAACAGGGTGAATTGCAACAACCTAAAAAGAAAAGAATAACTGCACCTACGATCTCTTGTAATGAAAGTCCGAAGATAAAAGCAAGTAAAAGATGTTTTGTTGGGTTGGAACCGGCAAAGCAAAGAGTAATGACACATGATGATATCACCAAAGCACTTGTCGTGCCTGAAATGACTACTAATCAAGATATTAGTATTGTAGTCAACGTGTCTGATATGACCACTAATCAAGATATTAGTGTTGTAGCTGACGTGCCTGATATGACCACTAATCAAGACAACATTGATCTGCTTGACATGCCTCTTATCCTCACACACGAAAGCACTAGTTTTGGTATTAAAGATGTACCTTGTGCGTTCACTAATGACAAATGGATAGATTATTTAGATTTAGGTAACATAAAGGACGTTGACTTTCAACCTGATATTTAG

mRNA sequence

ATGGATTTTTCAACCGGTTGTTTACCATTGCCATTGAACCATTACGTGGGCGTCAAATTTAGGCCTACCGATCAACAACTTCTTCACTATCTTCATTGTAAGATTTATAGTCTCCCATATTTTCAAGGCGCTATTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGGAAATCTGGCAACTTTTTGAAGGCATTGACGGTGAAGATCTCTATTTCTTCACCAAACTTAAGAGGTCGACAACAAACTTTGGACGTTTGTCAGCACACATCAATCGTAAGATTGGCCTAGCCAATGCCACTTGGAGTGGTGAGAACTCAGCCACTCCAATTTTTGTTGCTGCTGATTCTAATGAGCAAATAATCGGATATACCAAGCGCTTTAGGTATGAGAATGACCAATTGCAAGAACACCATGGAAAATGGATAATGTATGAATATAGCTTGCATCCAAATTATTTGTTGTGCGAAGGTGCAGATCCCAATTATGTTTTATGTCGGATGAGGAAGAATGAAAGAGCTAAAAGAAAATTAGAACAGGGTGAATTGCAACAACCTAAAAAGAAAAGAATAACTGCACCTACGATCTCTTGTAATGAAAGTCCGAAGATAAAAGCAAGTAAAAGATGTTTTGTTGGGTTGGAACCGGCAAAGCAAAGAGTAATGACACATGATGATATCACCAAAGCACTTGTCGTGCCTGAAATGACTACTAATCAAGATATTAGTATTGTAGTCAACGTGTCTGATATGACCACTAATCAAGATATTAGTGTTGTAGCTGACGTGCCTGATATGACCACTAATCAAGACAACATTGATCTGCTTGACATGCCTCTTATCCTCACACACGAAAGCACTAGTTTTGGTATTAAAGATGTACCTTGTGCGTTCACTAATGACAAATGGATAGATTATTTAGATTTAGGTAACATAAAGGACGTTGACTTTCAACCTGATATTTAG

Coding sequence (CDS)

ATGGATTTTTCAACCGGTTGTTTACCATTGCCATTGAACCATTACGTGGGCGTCAAATTTAGGCCTACCGATCAACAACTTCTTCACTATCTTCATTGTAAGATTTATAGTCTCCCATATTTTCAAGGCGCTATTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGGAAATCTGGCAACTTTTTGAAGGCATTGACGGTGAAGATCTCTATTTCTTCACCAAACTTAAGAGGTCGACAACAAACTTTGGACGTTTGTCAGCACACATCAATCGTAAGATTGGCCTAGCCAATGCCACTTGGAGTGGTGAGAACTCAGCCACTCCAATTTTTGTTGCTGCTGATTCTAATGAGCAAATAATCGGATATACCAAGCGCTTTAGGTATGAGAATGACCAATTGCAAGAACACCATGGAAAATGGATAATGTATGAATATAGCTTGCATCCAAATTATTTGTTGTGCGAAGGTGCAGATCCCAATTATGTTTTATGTCGGATGAGGAAGAATGAAAGAGCTAAAAGAAAATTAGAACAGGGTGAATTGCAACAACCTAAAAAGAAAAGAATAACTGCACCTACGATCTCTTGTAATGAAAGTCCGAAGATAAAAGCAAGTAAAAGATGTTTTGTTGGGTTGGAACCGGCAAAGCAAAGAGTAATGACACATGATGATATCACCAAAGCACTTGTCGTGCCTGAAATGACTACTAATCAAGATATTAGTATTGTAGTCAACGTGTCTGATATGACCACTAATCAAGATATTAGTGTTGTAGCTGACGTGCCTGATATGACCACTAATCAAGACAACATTGATCTGCTTGACATGCCTCTTATCCTCACACACGAAAGCACTAGTTTTGGTATTAAAGATGTACCTTGTGCGTTCACTAATGACAAATGGATAGATTATTTAGATTTAGGTAACATAAAGGACGTTGACTTTCAACCTGATATTTAG

Protein sequence

MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIWQLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQIIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQGELQQPKKKRITAPTISCNESPKIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMTTNQDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKDVPCAFTNDKWIDYLDLGNIKDVDFQPDI

Homology

[Close]

BLAST of HG10012166 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 6.8e-101
Identity = 200/312 (64.10%), Postives = 228/312 (73.08%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLNHYVGVKFRPTDQQLLHYLHCKIY  PYFQGA+FDFDLYGG EPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           + F GIDGEDLYFFTKLKRSTTN G LS HINRKIGL N TWSGENSA+PI+V  D ++Q
Sbjct: 61  ESFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNED-DQQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLE- 180
           IIGY KRFRYEN+  +EHHG+WIM+EY+LHPNY LCEG DPNYVLCR+R+NERA+RKLE 
Sbjct: 121 IIGYRKRFRYENESSEEHHGEWIMHEYNLHPNY-LCEGVDPNYVLCRIRRNERARRKLEI 180

Query: 181 QGELQQPKKKRITAPTISCNESPKIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMTTN 240
           QGEL+QP KKRI AP IS NE PK K  +RC          +   DD  +  +  E   N
Sbjct: 181 QGELKQPNKKRIKAPKISRNERPKAKTRERC--------DELQPIDD--QRAITCETIYN 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKDV-PCAF 300
            DI       DM T+QDISVV  +P+MTTNQDNI          +E+ S G +D  PC  
Sbjct: 241 SDIR-----HDMKTHQDISVVDYLPNMTTNQDNI----------NENISLGTEDYEPCML 285

Query: 301 TNDKWIDYLDLG 311
           T+D+  D   LG
Sbjct: 301 TDDELKDIQTLG 285

[Close]

BLAST of HG10012166 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 373.6 bits (958), Expect = 1.7e-99
Identity = 202/321 (62.93%), Postives = 231/321 (71.96%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLNHYVGVKFRPTDQQLLHYLHCKIY  PYFQGA+FDFDLYGG EPWEIW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F GIDGEDLYFFTKLKRSTTN G LS HINRKIGL N TWSGENSA+PI+V  D +EQ
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKD-HEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLE- 180
           IIGY KRFRYEN+ L+EHHG+WIM+EYSLHP+YL CEG DPNYVLCR+RKN+RAKRKLE 
Sbjct: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLET 180

Query: 181 QGELQQPKKKRITAPTISCNESP--KIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMT 240
           + EL+Q  KKR+    IS NE P  K K  KRC   L+P  QR           ++ E  
Sbjct: 181 ESELKQSNKKRMKVREISNNERPKAKTKTKKRC-DELQPIDQRA----------IICETI 240

Query: 241 TNQDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKD-VPC 300
            N DI       D+ T+QDI+VV  VP+MTTNQDNI          +E+TS G K+ VPC
Sbjct: 241 YNSDIR-----HDVNTHQDITVVDHVPNMTTNQDNI----------NENTSLGTKEYVPC 289

Query: 301 AFTNDKWIDYLDLGNIKDVDF 318
             T+++  D        +VDF
Sbjct: 301 MSTDNELRD-----EFNNVDF 289

[Close]

BLAST of HG10012166 vs. NCBI nr
Match: XP_008465646.1 (PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 6.4e-99
Identity = 196/319 (61.44%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLN YVGVKFRPTDQQLLHYL+CKI   PYFQGAIFDFDLYGGTEPWEIW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRST N G+LSAHI+RKIGLAN TWSGENSATPIF A + +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIF-ANEDDEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQ 180
           IIGY KRFRYENDQ++EHHG+WIM+EY LH +YL  +  D NYVLCR+RKNERAKRKLE 
Sbjct: 121 IIGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI 180

Query: 181 GELQQPKKKRITAPTISCNESPKIKASKRCFVG-LEPAKQRVMTHDDITKALVVPEMTTN 240
            ELQQP KKR+TAP IS N+  K KA + C V  L+P + R+M  + I  + ++P     
Sbjct: 181 RELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIP----- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTH-ESTSFGIKDVPCAF 300
                     D TT +DISVV  VP+M  NQDN+     PL+ T+ ES + G        
Sbjct: 241 ----------DKTTCEDISVVDHVPNMIANQDNV---YTPLMATNIESNNLGTGLNLGDL 300

Query: 301 TNDKWIDYLDLGNIKDVDF 318
            +D+W++ ++L  + DV F
Sbjct: 301 NDDEWMNCINLDELNDVHF 300

[Close]

BLAST of HG10012166 vs. NCBI nr
Match: TYK12052.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 6.4e-99
Identity = 196/319 (61.44%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLN YVGVKFRPTDQQLLHYL+CKI   PYFQGAIFDFDLYGGTEPWEIW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRST N G+LSAHI+RKIGLAN TWSGENSATPIF A + +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIF-ANEDDEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQ 180
           IIGY KRFRYENDQ++EHHG+WIM+EY LH +YL  +  D NYVLCR+RKNERAKRKLE 
Sbjct: 121 IIGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI 180

Query: 181 GELQQPKKKRITAPTISCNESPKIKASKRCFVG-LEPAKQRVMTHDDITKALVVPEMTTN 240
            ELQQP KKR+TAP IS N+  K KA + C V  L+P + R+M  + I  + ++P     
Sbjct: 181 RELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIP----- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTH-ESTSFGIKDVPCAF 300
                     D TT +DISVV  VP+M  NQDN+     PL+ T+ ES + G        
Sbjct: 241 ----------DKTTCEDISVVDHVPNMIANQDNV---YTPLMATNIESNNLGTGLNLGNL 300

Query: 301 TNDKWIDYLDLGNIKDVDF 318
            +D+W++ ++L  + DV F
Sbjct: 301 NDDEWMNCINLDELNDVHF 300

[Close]

BLAST of HG10012166 vs. NCBI nr
Match: KAA0053644.1 (protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-like [Cucumis melo var. makuwa])

HSP 1 Score: 367.9 bits (943), Expect = 9.2e-98
Identity = 191/318 (60.06%), Postives = 221/318 (69.50%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLP +H VGVKFRPTDQQLLHYL CKIY  PYFQGA+FDFDLYGG EPWEIW
Sbjct: 1   MDSSSGYLPLPFSHCVGVKFRPTDQQLLHYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRSTTN G LS HINRKIG AN TWSGENSATPI+   D +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLE- 180
           IIGY KRFRYENDQLQEHHG+WIM+EYSLH ++L C+G DPNYVLCR+RKNERAKRKL+ 
Sbjct: 121 IIGYRKRFRYENDQLQEHHGEWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKV 180

Query: 181 QGELQQPKKKRITAPTISCNESPKIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMTTN 240
           Q EL+QP KKRI AP                   L+P    V+T + I  + +       
Sbjct: 181 QRELKQPNKKRIMAPD-----------------QLQPINHGVITRETIYNSNI------- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKDVPCAFT 300
                   + DMTT+QD SVV  V +MTTNQ+N          T+ STS G   + C  T
Sbjct: 241 --------MHDMTTHQDTSVVDHVTNMTTNQNN----------TNASTSLGALCLTCMPT 276

Query: 301 NDKWIDYLDLGNIKDVDF 318
           ND+W D ++L  + D+DF
Sbjct: 301 NDEWKDIINLDELDDIDF 276

[Close]

BLAST of HG10012166 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.5e-101
Identity = 201/312 (64.42%), Postives = 228/312 (73.08%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLNHYVGVKFRPTDQQLLHYLHCKIY  PYFQGA+FDFDLYGG EPWEIW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F GIDGEDLYFFTKLKRSTTN G LS HINRKIGL N TWSGENSA+PI+V  D ++Q
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNED-DQQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLE- 180
           IIGY KRFRYEN+  +EHHG+WIM+EY+LHPNY LCEG DPNYVLCR+R+NERA+RKLE 
Sbjct: 121 IIGYRKRFRYENESSEEHHGEWIMHEYNLHPNY-LCEGVDPNYVLCRIRRNERARRKLEI 180

Query: 181 QGELQQPKKKRITAPTISCNESPKIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMTTN 240
           QGEL+QP KKRI AP IS NE PK K  +RC          +   DD  +  +  E   N
Sbjct: 181 QGELKQPNKKRIKAPKISRNERPKAKTRERC--------DELQPIDD--QRAITCETIYN 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKDV-PCAF 300
            DI       DM T+QDISVV  +P+MTTNQDNI          +E+ S G +D  PC  
Sbjct: 241 SDIR-----HDMKTHQDISVVDYLPNMTTNQDNI----------NENISLGTEDYEPCML 285

Query: 301 TNDKWIDYLDLG 311
           T+D+  D   LG
Sbjct: 301 TDDELKDIQTLG 285

[Close]

BLAST of HG10012166 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 8.1e-100
Identity = 202/321 (62.93%), Postives = 231/321 (71.96%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLNHYVGVKFRPTDQQLLHYLHCKIY  PYFQGA+FDFDLYGG EPWEIW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F GIDGEDLYFFTKLKRSTTN G LS HINRKIGL N TWSGENSA+PI+V  D +EQ
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKD-HEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLE- 180
           IIGY KRFRYEN+ L+EHHG+WIM+EYSLHP+YL CEG DPNYVLCR+RKN+RAKRKLE 
Sbjct: 121 IIGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLET 180

Query: 181 QGELQQPKKKRITAPTISCNESP--KIKASKRCFVGLEPAKQRVMTHDDITKALVVPEMT 240
           + EL+Q  KKR+    IS NE P  K K  KRC   L+P  QR           ++ E  
Sbjct: 181 ESELKQSNKKRMKVREISNNERPKAKTKTKKRC-DELQPIDQRA----------IICETI 240

Query: 241 TNQDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTHESTSFGIKD-VPC 300
            N DI       D+ T+QDI+VV  VP+MTTNQDNI          +E+TS G K+ VPC
Sbjct: 241 YNSDIR-----HDVNTHQDITVVDHVPNMTTNQDNI----------NENTSLGTKEYVPC 289

Query: 301 AFTNDKWIDYLDLGNIKDVDF 318
             T+++  D        +VDF
Sbjct: 301 MSTDNELRD-----EFNNVDF 289

[Close]

BLAST of HG10012166 vs. ExPASy TrEMBL
Match: A0A5A7TC54 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00130 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.1e-99
Identity = 196/319 (61.44%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLN YVGVKFRPTDQQLLHYL+CKI   PYFQGAIFDFDLYGGTEPWEIW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRST N G+LSAHI+RKIGLAN TWSGENSATPIF A + +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIF-ANEDDEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQ 180
           IIGY KRFRYENDQ++EHHG+WIM+EY LH +YL  +  D NYVLCR+RKNERAKRKLE 
Sbjct: 121 IIGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI 180

Query: 181 GELQQPKKKRITAPTISCNESPKIKASKRCFVG-LEPAKQRVMTHDDITKALVVPEMTTN 240
            ELQQP KKR+TAP IS N+  K KA + C V  L+P + R+M  + I  + ++P     
Sbjct: 181 RELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIP----- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTH-ESTSFGIKDVPCAF 300
                     D TT +DISVV  VP+M  NQDN+     PL+ T+ ES + G        
Sbjct: 241 ----------DKTTCEDISVVDHVPNMIANQDNV---YTPLMATNIESNNLGTGLNLGDL 300

Query: 301 TNDKWIDYLDLGNIKDVDF 318
            +D+W++ ++L  + DV F
Sbjct: 301 NDDEWMNCINLDELNDVHF 300

[Close]

BLAST of HG10012166 vs. ExPASy TrEMBL
Match: A0A5D3CL63 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00650 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.1e-99
Identity = 196/319 (61.44%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLN YVGVKFRPTDQQLLHYL+CKI   PYFQGAIFDFDLYGGTEPWEIW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRST N G+LSAHI+RKIGLAN TWSGENSATPIF A + +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIF-ANEDDEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQ 180
           IIGY KRFRYENDQ++EHHG+WIM+EY LH +YL  +  D NYVLCR+RKNERAKRKLE 
Sbjct: 121 IIGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI 180

Query: 181 GELQQPKKKRITAPTISCNESPKIKASKRCFVG-LEPAKQRVMTHDDITKALVVPEMTTN 240
            ELQQP KKR+TAP IS N+  K KA + C V  L+P + R+M  + I  + ++P     
Sbjct: 181 RELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIP----- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTH-ESTSFGIKDVPCAF 300
                     D TT +DISVV  VP+M  NQDN+     PL+ T+ ES + G        
Sbjct: 241 ----------DKTTCEDISVVDHVPNMIANQDNV---YTPLMATNIESNNLGTGLNLGNL 300

Query: 301 TNDKWIDYLDLGNIKDVDF 318
            +D+W++ ++L  + DV F
Sbjct: 301 NDDEWMNCINLDELNDVHF 300

[Close]

BLAST of HG10012166 vs. ExPASy TrEMBL
Match: A0A1S3CPA2 (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.1e-99
Identity = 196/319 (61.44%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 1   MDFSTGCLPLPLNHYVGVKFRPTDQQLLHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIW 60
           MD S+G LPLPLN YVGVKFRPTDQQLLHYL+CKI   PYFQGAIFDFDLYGGTEPWEIW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEGIDGEDLYFFTKLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNEQ 120
           Q F+GIDGEDLYFFTKLKRST N G+LSAHI+RKIGLAN TWSGENSATPIF A + +EQ
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIF-ANEDDEQ 120

Query: 121 IIGYTKRFRYENDQLQEHHGKWIMYEYSLHPNYLLCEGADPNYVLCRMRKNERAKRKLEQ 180
           IIGY KRFRYENDQ++EHHG+WIM+EY LH +YL  +  D NYVLCR+RKNERAKRKLE 
Sbjct: 121 IIGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEI 180

Query: 181 GELQQPKKKRITAPTISCNESPKIKASKRCFVG-LEPAKQRVMTHDDITKALVVPEMTTN 240
            ELQQP KKR+TAP IS N+  K KA + C V  L+P + R+M  + I  + ++P     
Sbjct: 181 RELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIP----- 240

Query: 241 QDISIVVNVSDMTTNQDISVVADVPDMTTNQDNIDLLDMPLILTH-ESTSFGIKDVPCAF 300
                     D TT +DISVV  VP+M  NQDN+     PL+ T+ ES + G        
Sbjct: 241 ----------DKTTCEDISVVDHVPNMIANQDNV---YTPLMATNIESNNLGTGLNLGDL 300

Query: 301 TNDKWIDYLDLGNIKDVDF 318
            +D+W++ ++L  + DV F
Sbjct: 301 NDDEWMNCINLDELNDVHF 300

[Close]

BLAST of HG10012166 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 52/171 (30.41%), Postives = 76/171 (44.44%), Query Frame = 0


Query: 17  GVKFRPTDQQL-LHYLHCKIYSLPYFQGAIFDFDLYGGTEPWEIWQLFEGIDGEDLYFFT 76
           G +F PTD++L LHYL  K+ S P     I D D+Y  ++PW++         ++ YFF+
Sbjct: 13  GFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIY-KSDPWDL-PAKAPFGEKEWYFFS 72

Query: 77  KLKRSTTNFGRLSAHINRKIGLANATWSGENSATPIFVAADSNE---QIIGYTKRF-RYE 136
              R   N     A  NR    A+  W    + T   +A  + E   + IG  K    Y 
Sbjct: 73  PRDRKYPN----GARPNR--AAASGYWKA--TGTDKLIAVPNGEGFHENIGIKKALVFYR 132

Query: 137 NDQLQEHHGKWIMYEY----SLHP---NYLLCEGAD-PNYVLCRMRKNERA 175
               +     WIM+EY    SL P   N     G++  ++VLCR+ K   A
Sbjct: 133 GKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSELDDWVLCRIYKKSHA 173

The following BLAST results are available for this feature:

BLAST of HG10012166 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652873.2	6.8e-101	64.10	NAC transcription factor 56 [Cucumis sativus]	[more]
XP_004142192.1	1.7e-99	62.93	NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot...	[more]
XP_008465646.1	6.4e-99	61.44	PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NA...	[more]
TYK12052.1	6.4e-99	61.44	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]
KAA0053644.1	9.2e-98	60.06	protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-li...	[more]

BLAST of HG10012166 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10012166 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFJ5	1.5e-101	64.42	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV...	[more]
A0A0A0KXM1	8.1e-100	62.93	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV...	[more]
A0A5A7TC54	3.1e-99	61.44	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CL63	3.1e-99	61.44	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CPA2	3.1e-99	61.44	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE...	[more]

BLAST of HG10012166 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04070.2	2.6e-05	30.41	NAC domain containing protein 47	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..176 e-value: 3.5E-22 score: 80.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 12..170
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..149 e-value: 1.4E-15 score: 58.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..171 score: 20.532696
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 15..235
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 15..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012166.1	HG10012166.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding