HG10012125 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012125
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAC domain-containing protein
Location	Chr01: 17906430 .. 17907686 (+)
RNA-Seq Expression	HG10012125
Synteny	HG10012125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACGGATCAGATTCTTGTTGAGAATTACCTTTTCAACAAGATTCATGGCTTCCCATATTCTCAAGCCGTTGTTTTCGACTGTGATCTCTACGGCCTTCTCGATCTTTGGGATATTTGGAATTTCTTCGGAGGTGTTGATGGTCAAGATCTTTTTTTCTTCACTAAGCTTAAGAGATTCACCACCAAATCTGGACATATTTCTTCACATATCAATCGCAAGATTGGCTCCACCGATGACACTTGGAGTGGTGAGAATTCAGCCACCCCTATTTATCCTACAGGTTGAGATGATCTAATCATTGCCTATTGCAAGCGTTTTAGATATGAGAATCCTCATCTGCCAGAACACTATGGTGAGTGGATCATGCATGAGTACAGCTTGCATGAGGGTTGTATCCTGCCTGATTGTTACGTTTTGTGTCGCCTAAGGAAGAATGAAAGATCCAAAAGAAAAGCACTACAAAACAATAAATGTTCCAATCAAGTTCAATCTATGAGCAAGAAAGTCATGTCACCACCTATGATTAATAATGATATGGCTGAGAAGAACAATGATACTGAGAAACGTAAAAGAAAAGTAAATAAAAGTTGTATTTCTGAGTTCCTACCGAAAAAGCAAAGAGTTGTGGTCCCTACGATAATTTCCAATATACCTTGCGACTCTCATATGACCACCAACCAAGGTATTAGTGACTATAACCCTCAAATGACGAATGATGAGATTGAACTTCGAGGGTCAGATTTGAGCACTCTCCAAGATAGCAATGATGTGCCCTTCAAGCCTCAGATGACGAATGACGAGATTGAACTTCGAGTGTCTGATATGACCATCAACCAAGGCACCAATGATATCCCTTGCAAGCCTCAAATGATGAATGATGAGATTGAACTTCAGGTGTTAGATATGACCACCAACCAAGACATTGGTGATGTGTTATGGGCACCTGAGATGAACCAAGTTGGTACCGGTGATATTGTGTCGTACTTGCCTGAGACGACTAATGATGAGATTCAACTTTCAACGCCATATGTGACCACCAACCAAAAGACTAATGATGTGTTTTGCACGCCTGAGATGAATCAGAGTACAAGTGATGAGATTATGCTTTGCACTAGTGATGATGTGTTTTGGGTGCCTGAGATGAAGCAGGATACGTGTGATATTTTGCCTTGCTTGATTGAAATGACTAGTGATGAGATTGAGCTTTGGGTGTTAGATATGACCACCAACCAAGGCGTTAGTGAGATGTGA

mRNA sequence

ATGCCAACGGATCAGATTCTTGTTGAGAATTACCTTTTCAACAAGATTCATGGCTTCCCATATTCTCAAGCCGTTGTTTTCGACTGTGATCTCTACGGCCTTCTCGATCTTTGGGATATTTGGAATTTCTTCGGAGGTGTTGATGGTCAAGATCTTTTTTTCTTCACTAAGCTTAAGAGATTCACCACCAAATCTGGACATATTTCTTCACATATCAATCGCAAGATTGGCTCCACCGATGACACTTGGAGTGGTGAGAATTCAGCCACCCCTATTTATCCTACAGAACACTATGGTGAGTGGATCATGCATGAGTACAGCTTGCATGAGGGTTGTATCCTGCCTGATTGTTACGTTTTGTGTCGCCTAAGGAAGAATGAAAGATCCAAAAGAAAAGCACTACAAAACAATAAATGTTCCAATCAAGTTCAATCTATGAGCAAGAAAGTCATGTCACCACCTATGATTAATAATGATATGGCTGAGAAGAACAATGATACTGAGAAACGTAAAAGAAAAGTAAATAAAAGTTGTATTTCTGAGTTCCTACCGAAAAAGCAAAGAGTTGTGGTCCCTACGATAATTTCCAATATACCTTGCGACTCTCATATGACCACCAACCAAGGTATTAGTGACTATAACCCTCAAATGACGAATGATGAGATTGAACTTCGAGGGTCAGATTTGAGCACTCTCCAAGATAGCAATGATGTGCCCTTCAAGCCTCAGATGACGAATGACGAGATTGAACTTCGAGTGTCTGATATGACCATCAACCAAGGCACCAATGATATCCCTTGCAAGCCTCAAATGATGAATGATGAGATTGAACTTCAGGTGTTAGATATGACCACCAACCAAGACATTGGTGATGTGTTATGGGCACCTGAGATGAACCAAGTTGGTACCGGTGATATTGTGTCGTACTTGCCTGAGACGACTAATGATGAGATTCAACTTTCAACGCCATATGTGACCACCAACCAAAAGACTAATGATGTGTTTTGCACGCCTGAGATGAATCAGAGTACAAGTGATGAGATTATGCTTTGCACTAGTGATGATGTGTTTTGGGTGCCTGAGATGAAGCAGGATACGTGTGATATTTTGCCTTGCTTGATTGAAATGACTAGTGATGAGATTGAGCTTTGGGTGTTAGATATGACCACCAACCAAGGCGTTAGTGAGATGTGA

Coding sequence (CDS)

ATGCCAACGGATCAGATTCTTGTTGAGAATTACCTTTTCAACAAGATTCATGGCTTCCCATATTCTCAAGCCGTTGTTTTCGACTGTGATCTCTACGGCCTTCTCGATCTTTGGGATATTTGGAATTTCTTCGGAGGTGTTGATGGTCAAGATCTTTTTTTCTTCACTAAGCTTAAGAGATTCACCACCAAATCTGGACATATTTCTTCACATATCAATCGCAAGATTGGCTCCACCGATGACACTTGGAGTGGTGAGAATTCAGCCACCCCTATTTATCCTACAGAACACTATGGTGAGTGGATCATGCATGAGTACAGCTTGCATGAGGGTTGTATCCTGCCTGATTGTTACGTTTTGTGTCGCCTAAGGAAGAATGAAAGATCCAAAAGAAAAGCACTACAAAACAATAAATGTTCCAATCAAGTTCAATCTATGAGCAAGAAAGTCATGTCACCACCTATGATTAATAATGATATGGCTGAGAAGAACAATGATACTGAGAAACGTAAAAGAAAAGTAAATAAAAGTTGTATTTCTGAGTTCCTACCGAAAAAGCAAAGAGTTGTGGTCCCTACGATAATTTCCAATATACCTTGCGACTCTCATATGACCACCAACCAAGGTATTAGTGACTATAACCCTCAAATGACGAATGATGAGATTGAACTTCGAGGGTCAGATTTGAGCACTCTCCAAGATAGCAATGATGTGCCCTTCAAGCCTCAGATGACGAATGACGAGATTGAACTTCGAGTGTCTGATATGACCATCAACCAAGGCACCAATGATATCCCTTGCAAGCCTCAAATGATGAATGATGAGATTGAACTTCAGGTGTTAGATATGACCACCAACCAAGACATTGGTGATGTGTTATGGGCACCTGAGATGAACCAAGTTGGTACCGGTGATATTGTGTCGTACTTGCCTGAGACGACTAATGATGAGATTCAACTTTCAACGCCATATGTGACCACCAACCAAAAGACTAATGATGTGTTTTGCACGCCTGAGATGAATCAGAGTACAAGTGATGAGATTATGCTTTGCACTAGTGATGATGTGTTTTGGGTGCCTGAGATGAAGCAGGATACGTGTGATATTTTGCCTTGCTTGATTGAAATGACTAGTGATGAGATTGAGCTTTGGGTGTTAGATATGACCACCAACCAAGGCGTTAGTGAGATGTGA

Protein sequence

MPTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRFTTKSGHISSHINRKIGSTDDTWSGENSATPIYPTEHYGEWIMHEYSLHEGCILPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMINNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGISDYNPQMTNDEIELRGSDLSTLQDSNDVPFKPQMTNDEIELRVSDMTINQGTNDIPCKPQMMNDEIELQVLDMTTNQDIGDVLWAPEMNQVGTGDIVSYLPETTNDEIQLSTPYVTTNQKTNDVFCTPEMNQSTSDEIMLCTSDDVFWVPEMKQDTCDILPCLIEMTSDEIELWVLDMTTNQGVSEM

Homology

[Close]

BLAST of HG10012125 vs. NCBI nr
Match: XP_038877574.1 (NAC domain-containing protein 96-like [Benincasa hispida])

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-45
Identity = 124/288 (43.06%), Postives = 160/288 (55.56%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQIL+E+YL+NKIH   YS  VVF CDLYG L+ W IWN +GGVDGQDL+FFTKLKR 
Sbjct: 20  PTDQILMEHYLYNKIHSLLYSTLVVFYCDLYGDLEPWKIWNSYGGVDGQDLYFFTKLKRS 79

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT-------------------EHYGEWI 121
              SG +S H+NRKIG    T  GE S TPI  +                   EH+GEWI
Sbjct: 80  INSSGQLSVHVNRKIGLAGGTGRGEKSTTPISGSNVPIIGYCRRLRYENSQLLEHHGEWI 139

Query: 122 MHEYSLHEGCIL----PDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMINN 181
           MHEYSLHE  I        YVLCR+RKNE  KRKAL    C+  +Q   K+V++P + + 
Sbjct: 140 MHEYSLHESVITCGYSDPKYVLCRIRKNEGPKRKAL--GICN--IQPTKKRVLAPEIHDT 199

Query: 182 DMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQ---------- 241
               +   T    RK NK  + +    +Q VV P ++ ++ CD  MTTNQ          
Sbjct: 200 RKINQRRPT----RKANKILLEQL--GEQSVVTPNMVCHMACDPKMTTNQIPHDVSYLAL 259

Query: 242 -----GISDY-NPQMTNDEIELRGSDLSTLQDSNDVPFKPQMTNDEIE 251
                GI D   P+MT ++I    SD+   Q+ N +P  P++T + +E
Sbjct: 260 TTTEKGIGDMPQPEMTINQIT---SDMPYAQNMNIMPHMPEITTNTME 294

[Close]

BLAST of HG10012125 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 4.4e-41
Identity = 109/247 (44.13%), Postives = 145/247 (58.70%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT---------------------EHYGE 121
           TT SG++S+HINRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 82  TTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLEEHHGE 141

Query: 122 WIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMI 181
           WIMHEYSLH   +    +   YVLCR+RKN+R+KRK     +  ++++  +KK M    I
Sbjct: 142 WIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKL----ETESELKQSNKKRMKVREI 201

Query: 182 NNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGIS--DYN 222
           +      NN+  K K K  K C  E  P  QR ++   I N      + T+Q I+  D+ 
Sbjct: 202 S------NNERPKAKTKTKKRC-DELQPIDQRAIICETIYNSDIRHDVNTHQDITVVDHV 256

[Close]

BLAST of HG10012125 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 5.4e-39
Identity = 112/277 (40.43%), Postives = 157/277 (56.68%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWESFGGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIY---------------------PTEHYGE 121
           TT SG++S+HINRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 82  TTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQIIGYRKRFRYENESSEEHHGE 141

Query: 122 WIMHEYSLHEGCI---LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMIN 181
           WIMHEY+LH   +   +   YVLCR+R+NER++RK     +   +++  +KK +  P I+
Sbjct: 142 WIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKL----EIQGELKQPNKKRIKAPKIS 201

Query: 182 NDMAEKNNDTEKRKRKVNKSCISEFLP-KKQRVVVPTIISNIPCDSHMTTNQGIS--DYN 241
            +        E+ K K  + C  E  P   QR +    I N      M T+Q IS  DY 
Sbjct: 202 RN--------ERPKAKTRERC-DELQPIDDQRAITCETIYNSDIRHDMKTHQDISVVDYL 261

Query: 242 PQMTNDEIELRGSDLSTLQDSNDVPFKP-QMTNDEIE 251
           P MT ++  +  +     +D     ++P  +T+DE++
Sbjct: 262 PNMTTNQDNINENISLGTED-----YEPCMLTDDELK 279

[Close]

BLAST of HG10012125 vs. NCBI nr
Match: XP_004139160.1 (NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical protein Csa_006844 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-38
Identity = 106/267 (39.70%), Postives = 147/267 (55.06%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 26  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRS 85

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT---------------------EHYGE 121
           TT  G++S+H+NRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 86  TTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGE 145

Query: 122 WIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMI 181
           WIMHEYS+H+  +    +   YVLCR+RKNER KRK L+        Q   K++ +P + 
Sbjct: 146 WIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ--GEAKQPNKKRIKAPHIS 205

Query: 182 NNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQ-------- 235
           +N+  ++    ++R          +  P        +++  +P   +MTTNQ        
Sbjct: 206 DNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDRVP---NMTTNQDNRNENTS 265

[Close]

BLAST of HG10012125 vs. NCBI nr
Match: KAA0053644.1 (protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-like [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-37
Identity = 109/281 (38.79%), Postives = 153/281 (54.45%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+  PY Q  VFD DLYG ++ W+IW  F G+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT----------------------EHYG 121
           TT SG++S+HINRKIGS + TWSGENSATPIY                        EH+G
Sbjct: 82  TTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQEHHG 141

Query: 122 EWIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPM 181
           EWIMHEYSLH+  +    +   YVLCR+RKNER+KRK     +     Q   K++M+P  
Sbjct: 142 EWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKVQRELK---QPNKKRIMAP-- 201

Query: 182 INNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGISDYNP 241
             + +   N+    R+   N + + +    +   VV  +       ++MTTNQ  ++ + 
Sbjct: 202 --DQLQPINHGVITRETIYNSNIMHDMTTHQDTSVVDHV-------TNMTTNQNNTNAST 261

Query: 242 QM---------TNDEIELRGSDLSTLQDSNDVPFKPQMTND 248
            +         TNDE      D+  L + +D+ F   + N+
Sbjct: 262 SLGALCLTCMPTNDE----WKDIINLDELDDIDFSSYVPNN 283

[Close]

BLAST of HG10012125 vs. ExPASy Swiss-Prot
Match: Q9C932 (NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.4e-05
Identity = 49/160 (30.63%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWN--FFGGVDGQDLFFFTKLK 61
           PTD+ L+  YL  K  G+ +S  ++ + DLY   D W + N   FG    ++ +FF+   
Sbjct: 22  PTDEELMVQYLCRKAAGYDFSLQLIAEIDLY-KFDPWVLPNKALFG---EKEWYFFSPRD 81

Query: 62  R---------FTTKSGHISSHINRKIGSTDDTWSGENSATPIY----PTEHYGEWIMHEY 121
           R             SG+  +    KI ST+    G   A   Y    P      WIMHEY
Sbjct: 82  RKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEY 141

Query: 122 SLHE-----GCILPDCYVLCRLRKNERSKRKALQNNKCSN 142
            L E     G    D +VLCR+ K + S +K + +N  +N
Sbjct: 142 RLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIAN 177

[Close]

BLAST of HG10012125 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.3e-05
Identity = 48/153 (31.37%), Postives = 66/153 (43.14%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDI----------WNFFGGVDGQD 61
           PTD+ L+  YL  K+ G+ +S  V+ D DLY   D WD+          W FF   D + 
Sbjct: 22  PTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKALFGEKEWYFFSPRDRK- 81

Query: 62  LFFFTKLKRFTTKSGHISSHINRKIGSTDDTWSGENSATPIY----PTEHYGEWIMHEYS 121
            +           SG+  +    KI + D    G   A   Y    P      WIMHEY 
Sbjct: 82  -YPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYR 141

Query: 122 LHE-----GCILPDCYVLCRL-RKNERSKRKAL 135
           L E     G    D +VLCR+ +K   S+R+A+
Sbjct: 142 LIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAV 171

[Close]

BLAST of HG10012125 vs. ExPASy Swiss-Prot
Match: Q9LVA1 (NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-04
Identity = 47/152 (30.92%), Postives = 63/152 (41.45%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQA-VVFDCDLYGLLDLWDIWNFFGGVDGQD---LFFFTK 61
           PTD+ LV+ YL NK+  FP  Q  V+ D DLY  ++ WDI    G   G++    FF  K
Sbjct: 15  PTDEELVDYYLKNKV-AFPGMQVDVIKDVDLY-KIEPWDIQELCGRGTGEEREWYFFSHK 74

Query: 62  LKRFTTKSGHISSHINRKIGSTDDTWSGENSATPIY-------------------PTEHY 121
            K++ T      +  NR  GS    W        IY                   P    
Sbjct: 75  DKKYPT-----GTRTNRATGS--GFWKATGRDKAIYSKQELVGMRKTLVFYKGRAPNGQK 134

Query: 122 GEWIMHEYSL---HEGCILPDCYVLCRLRKNE 128
            +WIMHEY L     G    + +V+CR  K +
Sbjct: 135 SDWIMHEYRLETDENGPPHEEGWVVCRAFKKK 157

[Close]

BLAST of HG10012125 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-41
Identity = 109/247 (44.13%), Postives = 145/247 (58.70%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT---------------------EHYGE 121
           TT SG++S+HINRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 82  TTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLEEHHGE 141

Query: 122 WIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMI 181
           WIMHEYSLH   +    +   YVLCR+RKN+R+KRK     +  ++++  +KK M    I
Sbjct: 142 WIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKL----ETESELKQSNKKRMKVREI 201

Query: 182 NNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGIS--DYN 222
           +      NN+  K K K  K C  E  P  QR ++   I N      + T+Q I+  D+ 
Sbjct: 202 S------NNERPKAKTKTKKRC-DELQPIDQRAIICETIYNSDIRHDVNTHQDITVVDHV 256

[Close]

BLAST of HG10012125 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-39
Identity = 112/277 (40.43%), Postives = 157/277 (56.68%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIY---------------------PTEHYGE 121
           TT SG++S+HINRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 82  TTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQIIGYRKRFRYENESSEEHHGE 141

Query: 122 WIMHEYSLHEGCI---LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMIN 181
           WIMHEY+LH   +   +   YVLCR+R+NER++RK     +   +++  +KK +  P I+
Sbjct: 142 WIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKL----EIQGELKQPNKKRIKAPKIS 201

Query: 182 NDMAEKNNDTEKRKRKVNKSCISEFLP-KKQRVVVPTIISNIPCDSHMTTNQGIS--DYN 241
            +        E+ K K  + C  E  P   QR +    I N      M T+Q IS  DY 
Sbjct: 202 RN--------ERPKAKTRERC-DELQPIDDQRAITCETIYNSDIRHDMKTHQDISVVDYL 261

Query: 242 PQMTNDEIELRGSDLSTLQDSNDVPFKP-QMTNDEIE 251
           P MT ++  +  +     +D     ++P  +T+DE++
Sbjct: 262 PNMTTNQDNINENISLGTED-----YEPCMLTDDELK 279

[Close]

BLAST of HG10012125 vs. ExPASy TrEMBL
Match: A0A0A0M0I5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.9e-39
Identity = 106/267 (39.70%), Postives = 147/267 (55.06%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+G PY Q  VFD DLYG ++ W+IW  FGG+DG+DL+FFTKLKR 
Sbjct: 52  PTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRS 111

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT---------------------EHYGE 121
           TT  G++S+H+NRKIG  + TWSGENSA+PIY                       EH+GE
Sbjct: 112 TTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEEHHGE 171

Query: 122 WIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPMI 181
           WIMHEYS+H+  +    +   YVLCR+RKNER KRK L+        Q   K++ +P + 
Sbjct: 172 WIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ--GEAKQPNKKRIKAPHIS 231

Query: 182 NNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQ-------- 235
           +N+  ++    ++R          +  P        +++  +P   +MTTNQ        
Sbjct: 232 DNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDRVP---NMTTNQDNRNENTS 291

[Close]

BLAST of HG10012125 vs. ExPASy TrEMBL
Match: A0A5D3BNU6 (Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00160 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-37
Identity = 109/281 (38.79%), Postives = 153/281 (54.45%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+ +YL  KI+  PY Q  VFD DLYG ++ W+IW  F G+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-HYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT----------------------EHYG 121
           TT SG++S+HINRKIGS + TWSGENSATPIY                        EH+G
Sbjct: 82  TTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQEHHG 141

Query: 122 EWIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPM 181
           EWIMHEYSLH+  +    +   YVLCR+RKNER+KRK     +     Q   K++M+P  
Sbjct: 142 EWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKVQRELK---QPNKKRIMAP-- 201

Query: 182 INNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGISDYNP 241
             + +   N+    R+   N + + +    +   VV  +       ++MTTNQ  ++ + 
Sbjct: 202 --DQLQPINHGVITRETIYNSNIMHDMTTHQDTSVVDHV-------TNMTTNQNNTNAST 261

Query: 242 QM---------TNDEIELRGSDLSTLQDSNDVPFKPQMTND 248
            +         TNDE      D+  L + +D+ F   + N+
Sbjct: 262 SLGALCLTCMPTNDE----WKDIINLDELDDIDFSSYVPNN 283

[Close]

BLAST of HG10012125 vs. ExPASy TrEMBL
Match: A0A1S3B941 (protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-37
Identity = 109/281 (38.79%), Postives = 152/281 (54.09%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWNFFGGVDGQDLFFFTKLKRF 61
           PTDQ L+  YL  KI+  PY Q  VFD DLYG ++ W+IW  F G+DG+DL+FFTKLKR 
Sbjct: 22  PTDQQLL-RYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRS 81

Query: 62  TTKSGHISSHINRKIGSTDDTWSGENSATPIYPT----------------------EHYG 121
           TT SG++S+HINRKIGS + TWSGENSATPIY                        EH+G
Sbjct: 82  TTNSGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQEHHG 141

Query: 122 EWIMHEYSLHEGCI----LPDCYVLCRLRKNERSKRKALQNNKCSNQVQSMSKKVMSPPM 181
           EWIMHEYSLH+  +    +   YVLCR+RKNER+KRK     +     Q   K++M+P  
Sbjct: 142 EWIMHEYSLHQDHLKCQGVDPNYVLCRIRKNERAKRKLKVQRELK---QPNKKRIMAP-- 201

Query: 182 INNDMAEKNNDTEKRKRKVNKSCISEFLPKKQRVVVPTIISNIPCDSHMTTNQGISDYNP 241
             + +   N+    R+   N + + +    +   VV  +       ++MTTNQ  ++ + 
Sbjct: 202 --DQLQPINHGVITRETIYNSNIMHDMTTHQDTSVVDHV-------TNMTTNQDNTNAST 261

Query: 242 QM---------TNDEIELRGSDLSTLQDSNDVPFKPQMTND 248
            +         TNDE      D+  L + +D+ F   + N+
Sbjct: 262 SLGALCLTCTPTNDE----WKDIINLDELDDIDFSSYVPNN 283

[Close]

BLAST of HG10012125 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 )

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-06
Identity = 49/160 (30.63%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDIWN--FFGGVDGQDLFFFTKLK 61
           PTD+ L+  YL  K  G+ +S  ++ + DLY   D W + N   FG    ++ +FF+   
Sbjct: 22  PTDEELMVQYLCRKAAGYDFSLQLIAEIDLY-KFDPWVLPNKALFG---EKEWYFFSPRD 81

Query: 62  R---------FTTKSGHISSHINRKIGSTDDTWSGENSATPIY----PTEHYGEWIMHEY 121
           R             SG+  +    KI ST+    G   A   Y    P      WIMHEY
Sbjct: 82  RKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEY 141

Query: 122 SLHE-----GCILPDCYVLCRLRKNERSKRKALQNNKCSN 142
            L E     G    D +VLCR+ K + S +K + +N  +N
Sbjct: 142 RLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIAN 177

[Close]

BLAST of HG10012125 vs. TAIR 10
Match: AT4G27410.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-06
Identity = 48/153 (31.37%), Postives = 66/153 (43.14%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDI----------WNFFGGVDGQD 61
           PTD+ L+  YL  K+ G+ +S  V+ D DLY   D WD+          W FF   D + 
Sbjct: 22  PTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKALFGEKEWYFFSPRDRK- 81

Query: 62  LFFFTKLKRFTTKSGHISSHINRKIGSTDDTWSGENSATPIY----PTEHYGEWIMHEYS 121
            +           SG+  +    KI + D    G   A   Y    P      WIMHEY 
Sbjct: 82  -YPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYR 141

Query: 122 LHE-----GCILPDCYVLCRL-RKNERSKRKAL 135
           L E     G    D +VLCR+ +K   S+R+A+
Sbjct: 142 LIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAV 171

[Close]

BLAST of HG10012125 vs. TAIR 10
Match: AT5G62380.1 (NAC-domain protein 101 )

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-05
Identity = 47/152 (30.92%), Postives = 63/152 (41.45%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQA-VVFDCDLYGLLDLWDIWNFFGGVDGQD---LFFFTK 61
           PTD+ LV+ YL NK+  FP  Q  V+ D DLY  ++ WDI    G   G++    FF  K
Sbjct: 15  PTDEELVDYYLKNKV-AFPGMQVDVIKDVDLY-KIEPWDIQELCGRGTGEEREWYFFSHK 74

Query: 62  LKRFTTKSGHISSHINRKIGSTDDTWSGENSATPIY-------------------PTEHY 121
            K++ T      +  NR  GS    W        IY                   P    
Sbjct: 75  DKKYPT-----GTRTNRATGS--GFWKATGRDKAIYSKQELVGMRKTLVFYKGRAPNGQK 134

Query: 122 GEWIMHEYSL---HEGCILPDCYVLCRLRKNE 128
            +WIMHEY L     G    + +V+CR  K +
Sbjct: 135 SDWIMHEYRLETDENGPPHEEGWVVCRAFKKK 157

[Close]

BLAST of HG10012125 vs. TAIR 10
Match: AT4G27410.3 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.2e-05
Identity = 52/168 (30.95%), Postives = 72/168 (42.86%), Query Frame = 0


Query: 2   PTDQILVENYLFNKIHGFPYSQAVVFDCDLYGLLDLWDI------WNFFGGVD----GQD 61
           PTD+ L+  YL  K+ G+ +S  V+ D DLY   D WD+      + F G  +    G+ 
Sbjct: 22  PTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKQTCFTFVGEYNCNYLGKA 81

Query: 62  LF------FFTKLKR---------FTTKSGHISSHINRKIGSTDDTWSGENSATPIY--- 121
           LF      FF+   R             SG+  +    KI + D    G   A   Y   
Sbjct: 82  LFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGK 141

Query: 122 -PTEHYGEWIMHEYSLHE-----GCILPDCYVLCRL-RKNERSKRKAL 135
            P      WIMHEY L E     G    D +VLCR+ +K   S+R+A+
Sbjct: 142 APKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAV 188

The following BLAST results are available for this feature:

BLAST of HG10012125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877574.1	1.7e-45	43.06	NAC domain-containing protein 96-like [Benincasa hispida]	[more]
XP_004142192.1	4.4e-41	44.13	NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot...	[more]
XP_011652873.2	5.4e-39	40.43	NAC transcription factor 56 [Cucumis sativus]	[more]
XP_004139160.1	2.0e-38	39.70	NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical p...	[more]
KAA0053644.1	2.9e-37	38.79	protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-li...	[more]

BLAST of HG10012125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C932	2.4e-05	30.63	NAC domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NAC019 PE=1 ...	[more]
Q93VY3	5.3e-05	31.37	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
Q9LVA1	3.4e-04	30.92	NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2...	[more]

BLAST of HG10012125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXM1	2.1e-41	44.13	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV...	[more]
A0A0A0LFJ5	2.6e-39	40.43	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV...	[more]
A0A0A0M0I5	9.9e-39	39.70	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV...	[more]
A0A5D3BNU6	1.4e-37	38.79	Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15...	[more]
A0A1S3B941	1.9e-37	38.79	protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1	[more]

BLAST of HG10012125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52890.1	1.7e-06	30.63	NAC domain containing protein 19	[more]
AT4G27410.2	3.7e-06	31.37	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G62380.1	2.4e-05	30.92	NAC-domain protein 101	[more]
AT4G27410.3	3.2e-05	30.95	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 2..108 e-value: 1.4E-5 score: 26.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 1..126 score: 12.916751
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 3..99 e-value: 2.6E-8 score: 35.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 1..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..152
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 2..252
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 2..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012125.1	HG10012125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding