HG10012123 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012123
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ER lumen protein-retaining receptor
Location	Chr01: 17894409 .. 17895267 (+)
RNA-Seq Expression	HG10012123
Synteny	HG10012123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTATGGATTTTTTTCCCCTCCTCCATTTCTTTGTTGGGATTTCTTATCTTTTGGAATCTTGCCCTTAAGACAAATAGCTTTTGTATTTGTTGTATGGGTACCCATTATCTAGGATTTGTAGGTTCTGAGAAGATTTGTTCCATTTGATGTATTACATACATGGTTTTGGAGTAGAAATGTGCTAGAATTGCCTAAGAATTGCAAAAGGGAAAATTTTGTTTAATTTGATGATAGTTCCAACATATTTATCAGACAATGAAGGCTTGGAGTAATTAAACAATGTGGATTTCTGTTAACATTTCGTAAGATTTGATAAGGATACCGGAATCTCAATGTTTTAGAGGGTCTTTGTTCTTTATGGGTTTTGTGCAAAGGTCTTTATCATGTTGTTTATTGGTTAGGTTTTGGCTGCAATTTCTTCTATTTTAATATACTTCACTTGATGTAGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTTAGCTCTTTTTATGATTTTCTCTTAGCTATAAAAATTCACATTGAAATTTGA

mRNA sequence

ATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTTAGCTCTTTTTATGATTTTCTCTTAGCTATAAAAATTCACATTGAAATTTGA

Coding sequence (CDS)

ATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTTAGCTCTTTTTATGATTTTCTCTTAGCTATAAAAATTCACATTGAAATTTGA

Protein sequence

MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEVSSFYDFLLAIKIHIEI

Homology

[Close]

BLAST of HG10012123 vs. NCBI nr
Match: XP_004144385.1 (ER lumen protein-retaining receptor [Cucumis sativus] >KGN58365.1 hypothetical protein Csa_002130 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. NCBI nr
Match: XP_008465077.1 (PREDICTED: ER lumen protein-retaining receptor [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 2.6e-57
Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAG+SLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. NCBI nr
Match: XP_022159725.1 (ER lumen protein-retaining receptor [Momordica charantia])

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-56
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSI+WYIRRHKIVRRSYDKNQDTFRHLFLI+PCFVLALLINEK TFKEV
Sbjct: 61  TVMKLIFLGSSYSIIWYIRRHKIVRRSYDKNQDTFRHLFLIIPCFVLALLINEKFTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. NCBI nr
Match: XP_022931239.1 (ER lumen protein-retaining receptor [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 2.2e-56
Identity = 122/133 (91.73%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRH+FLILPC VLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHIFLILPCVVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. NCBI nr
Match: XP_038886982.1 (ER lumen protein-retaining receptor [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 3.7e-56
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLA DMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAADMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           ++MKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV
Sbjct: 61  SIMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy Swiss-Prot
Match: Q9ZTN2 (ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 111/133 (83.46%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYA+VF TRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYALVFVTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           T MKL+FLGSS SIVWY+R HKIVRRSYDK+QDTFRHLFL+LPC +LAL+INEK TFKEV
Sbjct: 61  TTMKLVFLGSSLSIVWYMRHHKIVRRSYDKDQDTFRHLFLVLPCLLLALVINEKFTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSIYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy Swiss-Prot
Match: Q8VWI1 (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-50
Identity = 105/133 (78.95%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVF TRYLDIFT F+SLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           T MKL+FLGSS+SIVWY++ HK V R+YD+ QDTFRH FL+LPCF+LALLI+EK TF EV
Sbjct: 61  TSMKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEV 120

Query: 121 ---SSFYDFLLAI 131
              SS Y   +AI
Sbjct: 121 LWTSSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy Swiss-Prot
Match: P35402 (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.7e-43
Identity = 86/133 (64.66%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFR AGDM+HL SVL+LLLKI+  KSCAG+SLKTQELYA+VF TRYLD+FTD++SLYN
Sbjct: 1   MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           ++MK++F+ SS +IVW +RRH +VRRSYDK+ DTFRH +++L CFVL L++NEK T +EV
Sbjct: 61  SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 FWAFSIYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy Swiss-Prot
Match: Q5XHA2 (ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis OX=8364 GN=kdelr1 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-29
Identity = 66/120 (55.00%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFR  GD++HL+++L+LLLKI   +SCAG+S K+Q L+AIVFTTRYLD+FT+FISLYN
Sbjct: 1   MNIFRFLGDISHLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           T MK++++ SSY+ +W I  +   + +YD N DTFR  FLI+P  +LA L+N   T  E+
Sbjct: 61  TSMKMVYVASSYATIWMI--YSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEI 118

[Close]

BLAST of HG10012123 vs. ExPASy Swiss-Prot
Match: Q68ES4 (ER lumen protein-retaining receptor 1-B OS=Xenopus laevis OX=8355 GN=kdelr1-b PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-28
Identity = 64/120 (53.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFR  GD++HL+++++LLLKI   +SCAG+S K+Q L+AIVFTTRYLD+FT+FIS YN
Sbjct: 1   MNIFRFLGDISHLSAIIILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISFYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           T MK++++ SSY+ VW I  +   + +YD N DTFR  FLI+P  +L+ L+N   T  E+
Sbjct: 61  TSMKVVYVASSYATVWMI--YSKFKATYDGNHDTFRVEFLIVPTAILSFLVNHDFTPLEI 118

[Close]

BLAST of HG10012123 vs. ExPASy TrEMBL
Match: A0A0A0L8S9 (ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_3G629230 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.5e-58
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy TrEMBL
Match: A0A1S3CMY2 (ER lumen protein-retaining receptor OS=Cucumis melo OX=3656 GN=LOC103502779 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 123/133 (92.48%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAG+SLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy TrEMBL
Match: A0A6J1DZK0 (ER lumen protein-retaining receptor OS=Momordica charantia OX=3673 GN=LOC111026065 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.1e-57
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSI+WYIRRHKIVRRSYDKNQDTFRHLFLI+PCFVLALLINEK TFKEV
Sbjct: 61  TVMKLIFLGSSYSIIWYIRRHKIVRRSYDKNQDTFRHLFLIIPCFVLALLINEKFTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy TrEMBL
Match: A0A6J1ETS0 (ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC111437475 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 122/133 (91.73%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRH+FLILPC VLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHIFLILPCVVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. ExPASy TrEMBL
Match: A0A6J1K9I6 (ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111491327 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.2e-56
Identity = 121/133 (90.98%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           TVMKLIFLGSSYSIVWYIRRHKIVRRSYDK+QDTFRH+FLILPC VLALLINEKLTFKEV
Sbjct: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKSQDTFRHVFLILPCVVLALLINEKLTFKEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 MWTFSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. TAIR 10
Match: AT3G25040.1 (endoplasmic reticulum retention defective 2B )

HSP 1 Score: 200.7 bits (509), Expect = 7.7e-52
Identity = 105/133 (78.95%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVF TRYLDIFT F+SLYN
Sbjct: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           T MKL+FLGSS+SIVWY++ HK V R+YD+ QDTFRH FL+LPCF+LALLI+EK TF EV
Sbjct: 61  TSMKLVFLGSSFSIVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFTFLEV 120

Query: 121 ---SSFYDFLLAI 131
              SS Y   +AI
Sbjct: 121 LWTSSLYLEAVAI 133

[Close]

BLAST of HG10012123 vs. TAIR 10
Match: AT1G29330.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.6e-44
Identity = 86/133 (64.66%), Postives = 112/133 (84.21%), Query Frame = 0


Query: 1   MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYN 60
           MNIFR AGDM+HL SVL+LLLKI+  KSCAG+SLKTQELYA+VF TRYLD+FTD++SLYN
Sbjct: 1   MNIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN 60

Query: 61  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEV 120
           ++MK++F+ SS +IVW +RRH +VRRSYDK+ DTFRH +++L CFVL L++NEK T +EV
Sbjct: 61  SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFTVQEV 120

Query: 121 S-SFYDFLLAIKI 133
             +F  +L A+ I
Sbjct: 121 FWAFSIYLEAVAI 133

[Close]

BLAST of HG10012123 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09
Identity = 41/136 (30.15%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYNT 61
           N F +A ++ H A +L+L+ K+   K+C+G+SLK+QE+ AI    R +      I++   
Sbjct: 48  NHFFIASELIHAAGILILIYKLTRQKTCSGLSLKSQEVTAIFLAVRLI----CSINMEGD 107

Query: 62  VMKLIFLGSSYSIVW--YIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKE 121
           +  ++   +  S +W  Y+ R+K+ + SY K+ DT  + ++++P  +LAL+IN   ++  
Sbjct: 108 IHTVLDFATLVSTLWVIYMIRYKL-KASYIKSLDTCYNYYVLVPSAILALIINPSTSY-- 167

Query: 122 VSSFYDFLLAIKIHIE 136
            S F+  L A  ++ E
Sbjct: 168 -SYFHRILWAFCVYTE 175

[Close]

BLAST of HG10012123 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 37/113 (32.74%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLY-- 61
           N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL AI    R   ++  F+  Y  
Sbjct: 44  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 103

Query: 62  NTVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLIN 113
           +T++ L  LG++  +++ IR +  ++ +Y + +D F   +++ PC VLA+ I+
Sbjct: 104 HTILDLATLGTTLWVIYMIRFN--LKTTYMEEKDNFALYYVLAPCVVLAVWIH 150

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BLAST of HG10012123 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.2e-08
Identity = 38/112 (33.93%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTR-YLDIFTDFISLYN 61
           N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL AI    R Y  I  ++    +
Sbjct: 48  NLF-VAAEAVHSIGICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSIVMEYD--IH 107

Query: 62  TVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLIN 113
           T++ L  LG++  +++ IR    +R SY +++D F   +++ PC  LA+ I+
Sbjct: 108 TILDLATLGTTLWVIFMIRFK--LRASYMEDKDNFPLYYVLAPCVALAVFIH 154

The following BLAST results are available for this feature:

BLAST of HG10012123 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144385.1	2.0e-57	93.23	ER lumen protein-retaining receptor [Cucumis sativus] >KGN58365.1 hypothetical p...	[more]
XP_008465077.1	2.6e-57	92.48	PREDICTED: ER lumen protein-retaining receptor [Cucumis melo]	[more]
XP_022159725.1	1.3e-56	90.98	ER lumen protein-retaining receptor [Momordica charantia]	[more]
XP_022931239.1	2.2e-56	91.73	ER lumen protein-retaining receptor [Cucurbita moschata]	[more]
XP_038886982.1	3.7e-56	90.98	ER lumen protein-retaining receptor [Benincasa hispida]	[more]

BLAST of HG10012123 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZTN2	1.2e-54	83.46	ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1	[more]
Q8VWI1	1.1e-50	78.95	ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B P...	[more]
P35402	3.7e-43	64.66	ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A P...	[more]
Q5XHA2	2.3e-29	55.00	ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis OX=8364 GN=kdelr1 PE...	[more]
Q68ES4	2.6e-28	53.33	ER lumen protein-retaining receptor 1-B OS=Xenopus laevis OX=8355 GN=kdelr1-b PE...	[more]

BLAST of HG10012123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8S9	9.5e-58	93.23	ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_3G629230 P...	[more]
A0A1S3CMY2	1.2e-57	92.48	ER lumen protein-retaining receptor OS=Cucumis melo OX=3656 GN=LOC103502779 PE=3...	[more]
A0A6J1DZK0	6.1e-57	90.98	ER lumen protein-retaining receptor OS=Momordica charantia OX=3673 GN=LOC1110260...	[more]
A0A6J1ETS0	1.0e-56	91.73	ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC11143747...	[more]
A0A6J1K9I6	5.2e-56	90.98	ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111491327 ...	[more]

BLAST of HG10012123 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25040.1	7.7e-52	78.95	endoplasmic reticulum retention defective 2B	[more]
AT1G29330.1	2.6e-44	64.66	ER lumen protein retaining receptor family protein	[more]
AT3G25160.1	2.8e-09	30.15	ER lumen protein retaining receptor family protein	[more]
AT2G21190.1	2.3e-08	32.74	ER lumen protein retaining receptor family protein	[more]
AT4G38790.1	5.2e-08	33.93	ER lumen protein retaining receptor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000133	ER lumen protein retaining receptor	PRINTS	PR00660	ERLUMENR	coord: 52..68 score: 61.76 coord: 4..23 score: 55.0 coord: 31..51 score: 63.61
IPR000133	ER lumen protein retaining receptor	PFAM	PF00810	ER_lumen_recept	coord: 28..127 e-value: 6.8E-27 score: 95.1
IPR000133	ER lumen protein retaining receptor	PANTHER	PTHR10585	ER LUMEN PROTEIN RETAINING RECEPTOR	coord: 1..130
IPR000133	ER lumen protein retaining receptor	PROSITE	PS00951	ER_LUMEN_RECEPTOR_1	coord: 31..48
None	No IPR available	PANTHER	PTHR10585:SF80	ER LUMEN PROTEIN-RETAINING RECEPTOR	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012123.1	HG10012123.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0002758	innate immune response-activating signal transduction
biological_process	GO:0006621	protein retention in ER lumen
biological_process	GO:0015031	protein transport
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046923	ER retention sequence binding