HG10012122 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10012122
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase At1g63170-like
LocationChr01: 17882402 .. 17883007 (+)
RNA-Seq ExpressionHG10012122
SyntenyHG10012122
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTGGCAACTACTGCCTACTTCCAGTGCGATCTCCACCGCATTGACGGAACCGATCAATCTCTCGAAATCCGATTGGGGCGATTGATACGTCTGATCTACGAAAGCCCATTCACCAGAATTCCGTACAAGATCCGGACAGAAACTTCCTTGATTCCAGTGGAGAATGATACGCTCCCTCTCCCTCTGAGAAAGCTCGAAGATCCCCTGTTCTGCCATGCTTACATCGCTTCCTTTCTTTCCTTCTTCAAACTCCCCGCCGTAATCTCGGATCAAATCTGTCGCAACATCACGTCGTCCGTCGTTGAATTATTGGCCGCCGGAGACTACGACGCCAAGTTCTGCGTTATGGCAGAAATCAAGCGCATCGAACTGTTCTGGCGGGTGGATGTGGAAGAAGATCCGGCGAGTAAGAGTTTGAAGAAGGAGAATTTTGAAGATGGAGATTGCTCTGTTTGTCTTCAAGAACTACTGAAGGACCAGATGTGCAGAATCAAGTGCGGTCATGCCTATCATAAATCCTGCATTTTTAATTGGTTTAGACAGAGCAACACTTGTCCTTTGTGCAGAAGAAGTATTCTAAAAATTGTCAAAACGCTATAA

mRNA sequence

ATGTCTGTGGCAACTACTGCCTACTTCCAGTGCGATCTCCACCGCATTGACGGAACCGATCAATCTCTCGAAATCCGATTGGGGCGATTGATACGTCTGATCTACGAAAGCCCATTCACCAGAATTCCGTACAAGATCCGGACAGAAACTTCCTTGATTCCAGTGGAGAATGATACGCTCCCTCTCCCTCTGAGAAAGCTCGAAGATCCCCTGTTCTGCCATGCTTACATCGCTTCCTTTCTTTCCTTCTTCAAACTCCCCGCCGTAATCTCGGATCAAATCTGTCGCAACATCACGTCGTCCGTCGTTGAATTATTGGCCGCCGGAGACTACGACGCCAAGTTCTGCGTTATGGCAGAAATCAAGCGCATCGAACTGTTCTGGCGGGTGGATGTGGAAGAAGATCCGGCGAGTAAGAGTTTGAAGAAGGAGAATTTTGAAGATGGAGATTGCTCTGTTTGTCTTCAAGAACTACTGAAGGACCAGATGTGCAGAATCAAGTGCGGTCATGCCTATCATAAATCCTGCATTTTTAATTGGTTTAGACAGAGCAACACTTGTCCTTTGTGCAGAAGAAGTATTCTAAAAATTGTCAAAACGCTATAA

Coding sequence (CDS)

ATGTCTGTGGCAACTACTGCCTACTTCCAGTGCGATCTCCACCGCATTGACGGAACCGATCAATCTCTCGAAATCCGATTGGGGCGATTGATACGTCTGATCTACGAAAGCCCATTCACCAGAATTCCGTACAAGATCCGGACAGAAACTTCCTTGATTCCAGTGGAGAATGATACGCTCCCTCTCCCTCTGAGAAAGCTCGAAGATCCCCTGTTCTGCCATGCTTACATCGCTTCCTTTCTTTCCTTCTTCAAACTCCCCGCCGTAATCTCGGATCAAATCTGTCGCAACATCACGTCGTCCGTCGTTGAATTATTGGCCGCCGGAGACTACGACGCCAAGTTCTGCGTTATGGCAGAAATCAAGCGCATCGAACTGTTCTGGCGGGTGGATGTGGAAGAAGATCCGGCGAGTAAGAGTTTGAAGAAGGAGAATTTTGAAGATGGAGATTGCTCTGTTTGTCTTCAAGAACTACTGAAGGACCAGATGTGCAGAATCAAGTGCGGTCATGCCTATCATAAATCCTGCATTTTTAATTGGTTTAGACAGAGCAACACTTGTCCTTTGTGCAGAAGAAGTATTCTAAAAATTGTCAAAACGCTATAA

Protein sequence

MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAEIKRIELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSILKIVKTL
Homology
BLAST of HG10012122 vs. NCBI nr
Match: XP_038876865.1 (putative RING-H2 finger protein ATL53 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-41
Identity = 102/232 (43.97%), Postives = 128/232 (55.17%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           MS+ T + F+  L R DG DQSL IRLG L RL+  SP + +PY+I  E         T 
Sbjct: 1   MSLETASTFRYSLRRNDGVDQSLHIRLGFLWRLLSRSPSSGLPYEILYEIPSSSPRETTF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PL LR LEDPLFC AYIA  L    L AV  D + R ITS VVE+L +G+YD KF + AE
Sbjct: 61  PLSLRDLEDPLFCEAYIAQLLHSLDLGAVTCDIVARKITSVVVEVLESGNYDVKFQIAAE 120

Query: 121 IKRIELFW----------------------RVDVEEDPA--------SKSLKKENFED-- 180
           I  +++FW                      R  +EE PA        SK LK E F++  
Sbjct: 121 IDHVQMFWAEEERSSVPVENGERRGIVVEERAVLEEAPARRRAAERESKRLKMEKFDELK 180

Query: 181 ----GDCSVCLQEL--LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
               GDC VC +EL  ++ ++ RI+CGH YHKSCI  W +  N+CPLCRR I
Sbjct: 181 RAEMGDCCVCYEELNDVRKEVSRIRCGHIYHKSCILTWLQSRNSCPLCRREI 232

BLAST of HG10012122 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-39
Identity = 96/227 (42.29%), Postives = 130/227 (57.27%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           MS+A  A F+C+LHR DG DQ L+IR+G   RL+  SPF+  P+ I  ET    + +   
Sbjct: 1   MSLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFC AYI  FLS + L A I + I R I S VV+ +A G+Y+  F ++AE
Sbjct: 61  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAE 120

Query: 121 IKRIELFWRVD------VEED-------------------PASKSLKKENFED------G 180
           I  I++FW  D       EED                    A + LKKE F+       G
Sbjct: 121 IDYIQMFWMDDSATAAEEEEDEEEETEIFDDFSGRRGAPETAIERLKKEKFDGFGGEDLG 180

Query: 181 DCSVCLQELLK--DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
           +CSVC  E+    +++ RI CGH YHKSC+  W +++N+CPLCR  +
Sbjct: 181 NCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226

BLAST of HG10012122 vs. NCBI nr
Match: KAE8650076.1 (hypothetical protein Csa_011336 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-37
Identity = 96/238 (40.34%), Postives = 130/238 (54.62%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           M + + + F+  + R  G +QSL+IRLGR++RL+  SP   +PY+I  E++ IPV   T 
Sbjct: 1   MPLESASTFRYSIRRRCGVEQSLQIRLGRIVRLLSGSPSAGLPYEILQESASIPVHEATF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR +ED   C  YI   LS F L  V S  I + ITS VVE+L AGDYDAKF ++AE
Sbjct: 61  PLPLRDVEDSCLCEIYILQLLSSFNLGTVTSGIISKKITSMVVEVLGAGDYDAKFEMVAE 120

Query: 121 IKRIEL-FW------------------------RVDVEEDPASKSL------------KK 180
           I  I + FW                        RV +E  P  +              KK
Sbjct: 121 IDHIRMYFWTEEEERSWVGRGNNSERRGVVVEERVVLEGVPGRRRAGEREREREREREKK 180

Query: 181 ENFED----GDCSVCLQEL--LKDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSIL 196
             F++    GDCSVC +EL  ++ ++ RI+CGH YHKSCI  W +  N+CPLCRR ++
Sbjct: 181 GGFDERRELGDCSVCQEELKDVRKEVSRIRCGHVYHKSCILTWVQMRNSCPLCRREVV 238

BLAST of HG10012122 vs. NCBI nr
Match: XP_038905732.1 (E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida])

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-36
Identity = 95/225 (42.22%), Postives = 129/225 (57.33%), Query Frame = 0

Query: 2   SVATTAYFQCDLHRIDGT-DQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 61
           S+ T + F+  L R D + DQSL IRLG + R +  SP   +PY+I  E++ IP+  +  
Sbjct: 3   SLQTASTFRFSLRRHDDSDDQSLLIRLGFMHRQLSRSPSAGLPYEILHESNSIPMRINMF 62

Query: 62  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 121
           PLPLR LEDPL C  Y+   LS+  L AV  D I  +ITS + E+LAAG+++ KF ++A+
Sbjct: 63  PLPLRDLEDPLLCRVYVLRLLSYLDLNAVACDIIAHDITSFICEVLAAGNFEVKFRIVAD 122

Query: 122 IKRIELFWR---------------VDVEEDP--------ASKSLKKENF------EDGDC 181
           I  I +FWR               V +EE P        A + LK+E F      E GDC
Sbjct: 123 IDHIRMFWREQIGESRRGVVAEETVILEEAPTRRTAAKTAIERLKREKFDGFRGEELGDC 182

Query: 182 SVCLQELL--KDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
            VC +EL   K ++ RI CGH YHKSCI  W + +++CPLCRR I
Sbjct: 183 CVCCEELKEGKKEVSRIGCGHVYHKSCILTWAQNNDSCPLCRRKI 227

BLAST of HG10012122 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-36
Identity = 93/239 (38.91%), Postives = 130/239 (54.39%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           MS+A +A F+C+LHR D  DQ L+IR+    RL+  SPF+  P+ I  ET    + +   
Sbjct: 1   MSLADSATFRCNLHRYDDPDQLLQIRIRHSTRLLTGSPFSGYPFNIVHETLPTTMADAQF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFC AYI  FLS + L A I + I R I S VV+ +A G+Y+  F ++AE
Sbjct: 61  PLPLRELEDPLFCQAYIEEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAE 120

Query: 121 IKRIELFW--------------------RVDVEE-----------------DPASKSLKK 180
           I  I++FW                      D EE                 + A + LKK
Sbjct: 121 IDYIQMFWLDQSAIAAEEEEEEEEDEEEEEDEEEEEEEVIFDNFSGRRGAPETAIERLKK 180

Query: 181 ENFED------GDCSVCLQELLK--DQMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
           E F+       G+CSVC  E+    +++ RI CGH YHKSC+  W +++N+CPLCR+ +
Sbjct: 181 EKFDGFGGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKL 238

BLAST of HG10012122 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 142 KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL 196
           ++++ +DG +CS+CL EL+K    R+  KC H++H  CI  WF+  +TCP+CR ++L
Sbjct: 117 RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVL 173

BLAST of HG10012122 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 29/74 (39.19%), Postives = 41/74 (55.41%), Query Frame = 0

Query: 124 IELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWF 183
           I+ F ++  EE   S SL+KE+     CS+CL +  K  M R+   C H +H +C+  W 
Sbjct: 102 IKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWL 161

Query: 184 RQSNTCPLCRRSIL 196
           R   TCP+CR S L
Sbjct: 162 RLHPTCPVCRTSPL 175

BLAST of HG10012122 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 6.4e-07
Identity = 26/56 (46.43%), Postives = 30/56 (53.57%), Query Frame = 0

Query: 147 EDGDCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSILKIVKT 201
           E  DC VCL E  +D+  R+  KC HA+H SCI  W      CPLCR  I  I  T
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVT 228

BLAST of HG10012122 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0

Query: 137 ASKSLKKENFEDGD---CSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCR 196
           A+ + K+E  ED D   C+VCL EL   +  R   +CGH +H  C+  W    +TCPLCR
Sbjct: 117 AAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176

BLAST of HG10012122 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.8e-06
Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = 0

Query: 150 DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL 196
           DC+VCL E   +   R+  KC HA+H  CI  W    +TCPLCR S+L
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLL 180

BLAST of HG10012122 vs. ExPASy TrEMBL
Match: A0A6J1G7L1 (NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34
Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           M  A  +  +  L R  G DQ L++RLG   RLI  SP   +PY I  ET   P+ +   
Sbjct: 1   MPFANASTLRYSLRRNHGADQLLQLRLGYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFCHAY+   +S F L +V  + I + ITS V +  AA DYDAKF ++A+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IKRIELFW----------------RVDVEEDPASKSLKKENFEDGDCSVCLQELLKD--- 180
           I  I++FW                RV +EE   + + +K+     +CSVC +    +   
Sbjct: 121 IDYIQMFWMEKHRGSVGRGVMVEERVVLEETGVA-AAEKQGIGGEECSVCYESYEAEKGG 180

Query: 181 --QMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
             ++ +I CGHA+HKSCI  WF++SN+CPLCR  +
Sbjct: 181 EKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of HG10012122 vs. ExPASy TrEMBL
Match: A0A6J1L191 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111499501 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 87/220 (39.55%), Postives = 123/220 (55.91%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           M  A ++  +  L R  GTDQ L++RLG   RLI +SP   +PY I  ET L P+ +   
Sbjct: 1   MLFANSSTLRYSLRRHHGTDQLLQVRLGYSSRLISQSPSAGLPYDILEETPLTPIADALF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS V +  AA DYDAKF ++ +
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSMSCNPIIQKITSLVTQ-WAAVDYDAKFQLVVD 120

Query: 121 IKRIELFWR----------VDVEE-----------DPASKSLKKENFEDGDCSVCLQELL 180
           I  I++FWR          V VEE             A+ +  K+     +CSVC +   
Sbjct: 121 IDYIQMFWREESRGPVRRGVMVEERIVLDKAGVAATVAAAAAGKQGMGGEECSVCYECYD 180

Query: 181 KD-----QMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
           ++     ++ +I CGH +HKSCI  WF+ SN+CPLCR  +
Sbjct: 181 EEKGGDKEVAKIPCGHMFHKSCILTWFQCSNSCPLCRAKL 219

BLAST of HG10012122 vs. ExPASy TrEMBL
Match: A0A6J1G7R8 (E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451612 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.4e-33
Identity = 86/217 (39.63%), Postives = 122/217 (56.22%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           M  A ++  +  L R DGTDQ L++RLG   RLI  SP++ +PY I  ET    + +   
Sbjct: 1   MLFANSSTLRYSLRRKDGTDQLLQVRLGYSSRLISRSPYSGLPYDILEETPSTLIADTLF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS V +  AA DYD KF ++A+
Sbjct: 61  PLPLRELEDPLFCHAYLVELVSSLNLDSISCNPIAQKITSLVTQ-WAAVDYDLKFQLVAD 120

Query: 121 IKRIELFWR----------VDVEED--------PASKSLKKENFEDGDCSVCLQELLKD- 180
           I  I++FWR          V VEE          A+ +  K+     +CSVC +   ++ 
Sbjct: 121 IDYIQMFWREESRGPVRRGVMVEEKVVLEEAGVAATSAAGKQGMGGEECSVCYECYDEEK 180

Query: 181 ----QMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
               ++ +I CGH +HKSCI  WF  SN+CPLCR  +
Sbjct: 181 GGDKEVAKIPCGHMFHKSCILTWFLCSNSCPLCRAKL 216

BLAST of HG10012122 vs. ExPASy TrEMBL
Match: A0A6J1L186 (NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 5.9e-32
Identity = 84/214 (39.25%), Postives = 117/214 (54.67%), Query Frame = 0

Query: 1   MSVATTAYFQCDLHRIDGTDQSLEIRLGRLIRLIYESPFTRIPYKIRTETSLIPVENDTL 60
           M +A  +  +  L R  G DQ L  RL    RLI  SP   +PY I  ET   P+ +   
Sbjct: 1   MPLANASTLRYSLRRNHGADQFLRFRLCYSSRLISRSPSAGLPYDILEETPSTPMADALF 60

Query: 61  PLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCVMAE 120
           PLPLR+LEDPLFCHAY+   +S   L ++  + I + ITS V +  AA DYDAKF ++A+
Sbjct: 61  PLPLRELEDPLFCHAYLIELVSSLNLDSMSCNPIVQKITSLVTQ-WAAVDYDAKFQLVAD 120

Query: 121 IKRIELFWR----------VDVEEDPASK-----SLKKENFEDGDCSVCLQELLKD---- 180
           I  I++FW           V VEE    K     + +K+     +CSVC +    +    
Sbjct: 121 IDYIQMFWMEKRPGSVGRGVMVEEKVVLKEAEVAAAEKQGIGGEECSVCYESYEAEKGGE 180

Query: 181 -QMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
            ++ +I CGH +HKSCI  WF++SN+CPLCR  +
Sbjct: 181 REVAKIPCGHVFHKSCILTWFQRSNSCPLCRAKL 213

BLAST of HG10012122 vs. ExPASy TrEMBL
Match: A0A5D3BYE9 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00110 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 9.8e-27
Identity = 75/213 (35.21%), Postives = 114/213 (53.52%), Query Frame = 0

Query: 2   SVATTAYFQCDLHRIDGTDQSLEIRLG----RLIRLIYESPFTRIPYKIRTETSLIPVEN 61
           S++     +CD    D  DQSL I+LG    +L R  Y  P     + I  E++ +P+  
Sbjct: 9   SISRYTVRRCD----DSNDQSLLIQLGIVHQQLSRPPYHGPTN---HNILHESNTVPLRI 68

Query: 62  DTLPLPLRKLEDPLFCHAYIASFLSFFKLPAVISDQICRNITSSVVELLAAGDYDAKFCV 121
              PLPL++L+DP  CH Y    L++  L     D + ++ITS + E+LAAG+ + KF +
Sbjct: 69  TVFPLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRI 128

Query: 122 MAEIKRIELFWRVDVEEDPASKSL----------KKENFED----GDCSVCLQELL--KD 181
           +A I R+++ WR +  +                 K + FE+    GDC VC +EL   + 
Sbjct: 129 VALIDRVQMIWREETGKSRGGSRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEK 188

Query: 182 QMCRIKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
           ++ RI CGH YHKSCI NW  ++++CPLCR  I
Sbjct: 189 EVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 214

BLAST of HG10012122 vs. TAIR 10
Match: AT4G12140.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0

Query: 138 SKSLKKENFEDGDCSVCLQELL---KDQMCRIKCGHAYHKSCIFNWFRQSNTCPLCR 192
           ++ LK  N E   CS+CLQ L+   K    R+ C H +H SC+  W ++ NTCP+CR
Sbjct: 140 AEELKSFNMETDSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCR 196

BLAST of HG10012122 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 142 KKENFEDG-DCSVCLQELLKDQMCRI--KCGHAYHKSCIFNWFRQSNTCPLCRRSIL 196
           ++++ +DG +CS+CL EL+K    R+  KC H++H  CI  WF+  +TCP+CR ++L
Sbjct: 117 RQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVL 173

BLAST of HG10012122 vs. TAIR 10
Match: AT4G12210.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0

Query: 123 RIELFWRVDVEEDPASKSLKKENFEDGDCSVCLQELLK----DQMCRIKCGHAYHKSCIF 182
           RI L  R+  EE      LK    E   CS+CL+ L+       + R+ C H +H  C+ 
Sbjct: 131 RIVLLGRIKAEE------LKSLKMETESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLL 190

Query: 183 NWFRQSNTCPLCRRSI 195
            WF + NTCPLCR  +
Sbjct: 191 EWFMRKNTCPLCRTEL 200

BLAST of HG10012122 vs. TAIR 10
Match: AT5G41430.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.4e-09
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 0

Query: 128 WRVDVEEDPASKSLKKENFEDGDCSVCLQELLK-DQMCRI-KCGHAYHKSCIFNWFRQSN 187
           +R  +EE    K ++KE F++  CS+CL+EL    ++ RI KC H +H+SCI +W +Q+ 
Sbjct: 95  YRASIEE-MEFKDIEKEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNR 154

Query: 188 TCPLCR 192
           +CP CR
Sbjct: 155 SCPNCR 159

BLAST of HG10012122 vs. TAIR 10
Match: AT3G30460.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 31/89 (34.83%), Postives = 44/89 (49.44%), Query Frame = 0

Query: 109 GDYDAKFCVMAEIKRIELFWRVDVEEDPASKSLKKENFEDG--DCSVCLQEL-LKDQMCR 168
           G YD  F ++         W    EE P  +   +E  E G   C++C +EL   +++  
Sbjct: 53  GSYDEIFGLVLGNSSSCTRWLNAGEELPVVEFTAEEMMERGLVVCAICREELAANERLSE 112

Query: 169 IKCGHAYHKSCIFNWFRQSNTCPLCRRSI 195
           + C H YHK CI NW    NTCPLCR ++
Sbjct: 113 LPCRHYYHKECISNWLSNRNTCPLCRHNV 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038876865.15.0e-4143.97putative RING-H2 finger protein ATL53 [Benincasa hispida][more]
XP_023539480.12.7e-3942.29E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
KAE8650076.13.3e-3740.34hypothetical protein Csa_011336 [Cucumis sativus][more]
XP_038905732.11.3e-3642.22E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida][more]
XP_023539471.11.7e-3638.91uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9XF632.0e-0842.11RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1[more]
Q9FG211.7e-0739.19Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P... [more]
Q8LFY86.4e-0746.43RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2[more]
Q9LRB71.4e-0639.06E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.... [more]
Q940Q41.8e-0647.92RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A6J1G7L11.7e-3440.47NEP1-interacting protein-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111451601 PE... [more]
A0A6J1L1911.4e-3339.55E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1G7R81.4e-3339.63E3 ubiquitin-protein ligase MBR2-like OS=Cucurbita moschata OX=3662 GN=LOC111451... [more]
A0A6J1L1865.9e-3239.25NEP1-interacting protein-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111499495 PE=4... [more]
A0A5D3BYE99.8e-2735.21RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
Match NameE-valueIdentityDescription
AT4G12140.11.1e-0942.11RING/U-box superfamily protein [more]
AT1G72310.11.4e-0942.11RING/U-box superfamily protein [more]
AT4G12210.11.4e-0936.84RING/U-box superfamily protein [more]
AT5G41430.12.4e-0942.42RING/U-box superfamily protein [more]
AT3G30460.13.1e-0934.83RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 151..190
e-value: 3.5E-7
score: 39.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 150..191
e-value: 1.4E-12
score: 47.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 151..191
score: 12.813844
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 118..196
e-value: 1.1E-16
score: 62.3
NoneNo IPR availablePANTHERPTHR15710:SF107RING/U-BOX SUPERFAMILY PROTEINcoord: 119..194
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 119..194
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 138..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10012122.1HG10012122.1mRNA