HG10012087 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012087
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tetraspanin-18
Location	Chr01: 17365108 .. 17367779 (-)
RNA-Seq Expression	HG10012087
Synteny	HG10012087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGCACTTGTTGTCATGTTTCTCTCGCTTTCATCCTCAAATGCTTCAATTTTCTTCAAGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATGTTCCTGTTTCTCCGCCTCCTCCTGTACCGGCTTTGGCTCCTTCTCCGGCTAGTTCGGTTTCGTTTTATTTAAATTCTGAATCAGTCGCTGTTGCCGATCGGATTACCGCTTTGAATTTAGCTACCAATTTGATTCCTGAGTTCGATACGGAATTAAAGCTTGATTTGAACGCCTTTAAGCTTCCAGCCCCTTGGTGAGACTTGTTTGAATTTGTAGATTGGGAATTTCTGTGAGCTTTTCGATTCCTTCTGTTTCTTGTGACTCTTAATTAGGGAAATTCCGTGTTGTGCATTTATGAATGGGGAAAGTTTTTGTAATCAATGATCAAGTCGTTAGGGTTGGGATATCGTACTCTAAATTAATTCAACCTGCCTTCTTTTTTCTTTTTTTTATTCCCGAACAATCATTTGTACTTTTTGAAATTTAGTTCCGTATGAGTTCTGTGGCATCAATTTTACTCTTAATTTGTTGATGAAGTGTTATGTTTTGTATGGATATGATTGATCATATGGATGGATGGGACTCTTCTTTGAGAAGTAAACTAAACTTGAATTTTGCTAAAGTCTTATTCCCATTGATTCTCTTTCTGTATATTCATTAGGTAGTTCCTTAAGATATGAATCTCTCAATTTTATGCTGAGTTATCATTATGATCATTGCTTTATATTGGTAATTATGTCGTCAAGTGTTGGGTTCAATAGGCTCTAGTTTGATGCTTTTTTCTTTTTTATTGGTGGTGGTGGCAGGTTCATCTACTCATTCATGGGATTTGGCATCTTGTTGTGTTGTATTACTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTGTTTCGCATCCTAACATTTTTACTCTTTTACAGCTTGTATCTCAGTTCTAGATATTGCCTTTTCCCTCCTGAAAGTTACTGTTTTGCGCATTCAAAATACTCCAATACTGAATTTATCGTTGTTCTCATGTTAAACGATTGAAAATACTGATCCTAGAAAACGTTTTGAAGAATTGCATTCCAGTAGTTTAATTCAAGCAAAATGGATGCGGAAAGTGGATGTACTTTTTTTCATTGTACACTTCTCCACCTTAGTTCGACTACTTTTTTTCATTGTACACTTCTCCCAGCTTATTTGTACTGTTTTCCTTTGAAGTGGGAAGTACTTTGTTTCTTGATGAGTGAACATTTCTATTTAGCATCTCTTTCCCTTAACCCAGCAATCCTAGTATAACATGCTTATAATGCTATTTATTCTCGTTGAAGTGGCTTTGGTGGCATTTATTGCAATTGATCGCCGGTGGGAAAAGGTATTCTTCTGTACATGAAAGCAAATTTATGTCCCTATGCCTCTGTCAATATATATTTACCTGAAAACAATGATGCAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGGACTCAGGCAATTCATTGAAGACAACATTGATCTATGCAAGTGGATTGGTATCATTGTGATTTCAACCCAGGTAGAATTGATGGCAACTAATCATATACCCCTTAGCCTCATTTTGTGGTTGAATATTAATAGGCTAAATTGTAGATAATACAATTCTTTGAGAAGTTGCAATATTGTCTTATCTTTCATAAATGTTTCAAACTACTGTTGGATTAGAAATCTTAAAGAATTTTAGATGGAAATTAGATTGCATGGCAGTGACTTGGAAATTTGGAATGGTGTGGCAGTGTTTGGTTCCCAATTTCCATTTGGTATCACCAAAGCACCATTCTAGGTTCTAACTTTCGTCCAACATTTCAATGGATTTCTACTAGTTTTGACACCTTTATGAAAGGTCAAGAGTAATATTGCAACTTTTTTGAAGAATATGGATTTTTTTTTTTTTTTGGTAATTCAGCTATATTTTATGTTTGTCCGAGTGATACCAGGGGTGAATATATTAATCTGGTGGTTCACGTTTCTTCTGATGTCAGGAGTTTTTTGTGTTTGGAAGTATGCTCTTATAGTAGTTGGTATATCTTCCTAGAATTTCGTTACTTCCAATCCCATTATAGGCATTACTTTTCCATAGGACAAGTTGGAGGATTGTTTTTCCCTCCCAGATGAACCTCCCAGATGTCAGGAGAGTAAGCTGACTCGAGGCTTCCCCTCTGGCTGTGTGATCTCTTTTTATCTATTAGGATGGTGGCTTATGTTGCTTCTTTATGCAGTTTACTTAAAGTTTATAGTGTAATCTCTCGGGCACTATTTGATTATATTAGTTATGGACATTCACTTGAGTCTTTCATGCAATATCTCAGGCATTGTCTCTGCTGCTAGCAATCATTCTTAGATCCATGGTTTCGACCCGTAAAACCGAGTACGACACAGAAGAGGAGGTTGGTGCTCGAGATAGAACACGGGAGCCATTGCTTAATCCACCAGCAAATCAAGCTACTGGTGGTGCTCATTTTGACCTGTGGGGGCGCCCGCATGAGAGAGAAGGTATCGTGTTCTGCCATGAACTGTTCTTCTCTTTTAAGAAAGCGGAGGTGGGTAAATTCCACAAAGTCTGTTTCTAA

mRNA sequence

ATGGGTCGCACTTGTTGTCATGTTTCTCTCGCTTTCATCCTCAAATGCTTCAATTTTCTTCAAGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATGTTCCTGTTTCTCCGCCTCCTCCTGTACCGGCTTTGGCTCCTTCTCCGGCTAGTTCGGTTTCGTTTTATTTAAATTCTGAATCAGTCGCTGTTGCCGATCGGATTACCGCTTTGAATTTAGCTACCAATTTGATTCCTGAGTTCGATACGGAATTAAAGCTTGATTTGAACGCCTTTAAGCTTCCAGCCCCTTGGTTCATCTACTCATTCATGGGATTTGGCATCTTGTTGTGTTGTATTACTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTTGGCTTTGGTGGCATTTATTGCAATTGATCGCCGGTGGGAAAAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGGACTCAGGCAATTCATTGAAGACAACATTGATCTATGCAAGTGGATTGGTATCATTGTGATTTCAACCCAGGCATTGTCTCTGCTGCTAGCAATCATTCTTAGATCCATGGTTTCGACCCGTAAAACCGAGTACGACACAGAAGAGGAGGTTGGTGCTCGAGATAGAACACGGGAGCCATTGCTTAATCCACCAGCAAATCAAGCTACTGGTGGTGCTCATTTTGACCTGTGGGGGCGCCCGCATGAGAGAGAAGGTATCGTGTTCTGCCATGAACTGTTCTTCTCTTTTAAGAAAGCGGAGGTGGGTAAATTCCACAAAGTCTGTTTCTAA

Coding sequence (CDS)

ATGGGTCGCACTTGTTGTCATGTTTCTCTCGCTTTCATCCTCAAATGCTTCAATTTTCTTCAAGCTTTTGTTGGGGTTTCGATTATAGTTTATTCGGCATGGATGCTTGATCGCTGGAACCACCATGTTCCTGTTTCTCCGCCTCCTCCTGTACCGGCTTTGGCTCCTTCTCCGGCTAGTTCGGTTTCGTTTTATTTAAATTCTGAATCAGTCGCTGTTGCCGATCGGATTACCGCTTTGAATTTAGCTACCAATTTGATTCCTGAGTTCGATACGGAATTAAAGCTTGATTTGAACGCCTTTAAGCTTCCAGCCCCTTGGTTCATCTACTCATTCATGGGATTTGGCATCTTGTTGTGTTGTATTACTTTAGTTGGCTGTATTGCAGCTGAAGCAATAAGTGGCTGCTGCCTCTTGGCTTTGGTGGCATTTATTGCAATTGATCGCCGGTGGGAAAAGGATCTTCCGTTGGACCCAACTGGTGAATTGGAGGGACTCAGGCAATTCATTGAAGACAACATTGATCTATGCAAGTGGATTGGTATCATTGTGATTTCAACCCAGGCATTGTCTCTGCTGCTAGCAATCATTCTTAGATCCATGGTTTCGACCCGTAAAACCGAGTACGACACAGAAGAGGAGGTTGGTGCTCGAGATAGAACACGGGAGCCATTGCTTAATCCACCAGCAAATCAAGCTACTGGTGGTGCTCATTTTGACCTGTGGGGGCGCCCGCATGAGAGAGAAGGTATCGTGTTCTGCCATGAACTGTTCTTCTCTTTTAAGAAAGCGGAGGTGGGTAAATTCCACAAAGTCTGTTTCTAA

Protein sequence

MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPASSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILLCCITLVGCIAAEAISGCCLLALVAFIAIDRRWEKDLPLDPTGELEGLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREPLLNPPANQATGGAHFDLWGRPHEREGIVFCHELFFSFKKAEVGKFHKVCF

Homology

[Close]

BLAST of HG10012087 vs. NCBI nr
Match: XP_038888178.1 (tetraspanin-20 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.5e-122
Identity = 230/266 (86.47%), Postives = 242/266 (90.98%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAS 60
           MGRTCCHVSLAFILKCF+FLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPP+P LAPSPA 
Sbjct: 1   MGRTCCHVSLAFILKCFSFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPIPDLAPSPAR 60

Query: 61  SVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILLC 120
           SVSFYLNSESVAV DRITA+NLATNL PEF+TEL+LDLNAFKLPAPWFIYSFMGFGILLC
Sbjct: 61  SVSFYLNSESVAVNDRITAMNLATNLAPEFETELELDLNAFKLPAPWFIYSFMGFGILLC 120

Query: 121 CITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEGL 180
           CITLVGCIAAEAISGCCL              +ALVAFIAIDRRWEKDLPLDPTGEL+GL
Sbjct: 121 CITLVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIAIDRRWEKDLPLDPTGELDGL 180

Query: 181 RQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREPLL 240
            QFIEDNIDLCKWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVGA+DRTREPLL
Sbjct: 181 WQFIEDNIDLCKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGAQDRTREPLL 240

Query: 241 NPPANQATGGAHFDLWG-RPHEREGI 252
           NPPANQA+ GAHFDLWG R  E+ G+
Sbjct: 241 NPPANQAS-GAHFDLWGARMREKYGL 265

[Close]

BLAST of HG10012087 vs. NCBI nr
Match: KAA0037895.1 (tetraspanin-18 [Cucumis melo var. makuwa] >TYJ98029.1 tetraspanin-18 [Cucumis melo var. makuwa])

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115
Identity = 225/267 (84.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA+++A + IPEF+  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              +ALVAFIAIDRRWEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREG 251
           LLNPPANQA  GAHFDLWG R  E+ G
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYG 266

[Close]

BLAST of HG10012087 vs. NCBI nr
Match: XP_008447349.1 (PREDICTED: tetraspanin-18 [Cucumis melo])

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115
Identity = 225/267 (84.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA+++A + IPEF+  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              +ALVAFIAIDRRWEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREG 251
           LLNPPANQA  GAHFDLWG R  E+ G
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYG 266

[Close]

BLAST of HG10012087 vs. NCBI nr
Match: XP_004152011.1 (tetraspanin-18 [Cucumis sativus] >KGN58325.1 hypothetical protein Csa_017444 [Cucumis sativus])

HSP 1 Score: 425.6 bits (1093), Expect = 3.2e-115
Identity = 224/268 (83.58%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA++LA + IPEFD  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDLAADFIPEFDREELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              + LVAFIAIDR WEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVGLVAFIAIDRSWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LR FIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREGI 252
           LLNPPANQA  GAHFDLWG R  E+ G+
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYGL 267

[Close]

BLAST of HG10012087 vs. NCBI nr
Match: KAG6571566.1 (Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.0 bits (1081), Expect = 7.8e-114
Identity = 220/267 (82.40%), Postives = 233/267 (87.27%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60
           M RTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILL 120
              SFYL+SESVAVADRI  +NLA + IP FDTEL++DLNAFKLPAPWFIYSFMG GILL
Sbjct: 61  ---SFYLSSESVAVADRIMPINLAADSIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEG 180
           CCI LVGCIAAEAISGCCL              +ALVAFI IDRRWEKDLPLDPTGELE 
Sbjct: 121 CCIALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEE 180

Query: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREPL 240
           LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE+GARDRTREPL
Sbjct: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPL 240

Query: 241 LNPPANQATGGAHFDLWG-RPHEREGI 252
           LNPP NQA+ GAHFDLWG R  E+ G+
Sbjct: 241 LNPPGNQAS-GAHFDLWGARMREKYGL 263

[Close]

BLAST of HG10012087 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.3e-65
Identity = 138/274 (50.36%), Postives = 180/274 (65.69%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAS 60
           M   CCHVS A ILK  NFLQAF+G+SII+YS WMLD++NHHVPV PPP  P  A SP S
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDS 60

Query: 61  SVSF-----YLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGF 120
           S SF      +NS S ++ + I    ++  ++     +   +L +  LPAPWFIY FM  
Sbjct: 61  SYSFSNSIIEINSVSDSLKNPIDF--VSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAI 120

Query: 121 GILLCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTG 180
           GIL+C +T++G IAAEAI+GCCL               ALV FI IDR WEKDLP DPTG
Sbjct: 121 GILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTG 180

Query: 181 ELEGLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEV-GARDR 240
           EL  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R
Sbjct: 181 ELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSR 240

Query: 241 TREPLLNPPANQ-ATGGAHFDLW-GRPHEREGIV 253
            R+ LL P ANQ ++G ++ D W  R  E+ G++
Sbjct: 241 ARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLI 272

[Close]

BLAST of HG10012087 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.0e-60
Identity = 135/269 (50.19%), Postives = 172/269 (63.94%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M R CCHVS A  LK  NF+QAF+GVSII+YS WML  ++ H+PV PPP   + + +  A
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILL 120
           +SVS  L +      D + ++ L +N       +   +L +  LPAPWFIYSFM  GIL+
Sbjct: 61  TSVSEPLKNP----IDFVASIILGSN-----GGDHGFNLRSLDLPAPWFIYSFMAVGILV 120

Query: 121 CCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEG 180
           C +T +G IAAEAI+GCCL               ALVA+IAIDR WEKDLP DPTGEL  
Sbjct: 121 CIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSS 180

Query: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEE-EVGARDRTREP 240
           LR FIE+NID+CKW+GI V++ Q LSLLLA++LR+MVST K E D EE +   R RT +P
Sbjct: 181 LRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDP 240

Query: 241 LLNPPANQA-TGGAHFDLW-GRPHEREGI 252
           LL P  NQA  G +  + W  R  E+ G+
Sbjct: 241 LLGPQGNQAPAGSSKIENWSSRIREKYGL 260

[Close]

BLAST of HG10012087 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 63/219 (28.77%), Postives = 101/219 (46.12%), Query Frame = 0


Query: 10  LAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPASSVSFYLNSE 69
           L  +LK  N L   VG+++I+Y+ W++ +W   +   P                 + +S+
Sbjct: 9   LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLP-----------------FADSD 68

Query: 70  SVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILLCCITLVGCIA 129
                                             P PWFIYSF+G G +LC +T  G IA
Sbjct: 69  H---------------------------------PVPWFIYSFLGLGAILCVVTCAGHIA 128

Query: 130 AEAISGCCLLALVAFIA--------------IDRRWEKDLPLDPTGELEGLRQFIEDNID 189
           AE ++GCCL   + FI               ++R W+KD P DP+G      +FIE N  
Sbjct: 129 AETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFK 177

Query: 190 LCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE 215
           +CKWIG+ ++  Q LS+L+A++L+++       YD+++E
Sbjct: 189 ICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDE 177

[Close]

BLAST of HG10012087 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-15
Identity = 70/245 (28.57%), Postives = 111/245 (45.31%), Query Frame = 0


Query: 6   CHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPASSVSFY 65
           C   L  +LK  NFL A  G+ +I Y  ++   +     V+       L     S VSF 
Sbjct: 3   CRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKR---VTDNSVTFDLTNGDQSYVSF- 62

Query: 66  LNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILLCCITLV 125
                      + A++L++N+   FD           LP  WFIY F+G G+ L  I+  
Sbjct: 63  -------GRPILMAVSLSSNI---FD----------NLPKAWFIYLFIGIGVALFVISCC 122

Query: 126 GCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEGLRQFIE 185
           GC+   + S CCL              L   AFI  D  W  +LP D TG  + +  F+ 
Sbjct: 123 GCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLR 182

Query: 186 DNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE-VGARDRTREPLLNPPA 236
           +N  + +W+ +  +  +AL  LLA+++R+  +    EYD+++E +  R + R+P +N  A
Sbjct: 183 ENWKIVRWVALGAVVFEALLFLLALMVRA--ANTPAEYDSDDEYLAPRQQIRQPFINRQA 221

[Close]

BLAST of HG10012087 vs. ExPASy TrEMBL
Match: A0A5A7T8U7 (Tetraspanin-18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00590 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.3e-116
Identity = 225/267 (84.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA+++A + IPEF+  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              +ALVAFIAIDRRWEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREG 251
           LLNPPANQA  GAHFDLWG R  E+ G
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYG 266

[Close]

BLAST of HG10012087 vs. ExPASy TrEMBL
Match: A0A1S3BH71 (tetraspanin-18 OS=Cucumis melo OX=3656 GN=LOC103489821 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 5.3e-116
Identity = 225/267 (84.27%), Postives = 237/267 (88.76%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MDRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA+++A + IPEF+  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDIAADFIPEFNMEELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              +ALVAFIAIDRRWEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVALVAFIAIDRRWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LRQFIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRQFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREG 251
           LLNPPANQA  GAHFDLWG R  E+ G
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYG 266

[Close]

BLAST of HG10012087 vs. ExPASy TrEMBL
Match: A0A0A0L8P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115
Identity = 224/268 (83.58%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M RTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP A
Sbjct: 1   MARTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFD-TELKLDLNAFKLPAPWFIYSFMGFGIL 120
           SSVSFYLNSESV VADRITA++LA + IPEFD  ELKL+LNAFKLPAPWFIYSFMGFG+L
Sbjct: 61  SSVSFYLNSESVTVADRITAMDLAADFIPEFDREELKLELNAFKLPAPWFIYSFMGFGVL 120

Query: 121 LCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELE 180
           LCCITLVGCIAAEAISGCCL              + LVAFIAIDR WEKDLPLDPTGEL+
Sbjct: 121 LCCITLVGCIAAEAISGCCLCFYNMLIMLFIIVEVGLVAFIAIDRSWEKDLPLDPTGELD 180

Query: 181 GLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREP 240
            LR FIEDNI+L KWIGI+VISTQALSLLLAIILRSMVSTRKTEYDTEEEVG RDRTREP
Sbjct: 181 ELRHFIEDNINLSKWIGIVVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGVRDRTREP 240

Query: 241 LLNPPANQATGGAHFDLWG-RPHEREGI 252
           LLNPPANQA  GAHFDLWG R  E+ G+
Sbjct: 241 LLNPPANQA-AGAHFDLWGARMREKYGL 267

[Close]

BLAST of HG10012087 vs. ExPASy TrEMBL
Match: A0A6J1HWE7 (tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 219/267 (82.02%), Postives = 232/267 (86.89%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60
           M RTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILL 120
              SFYL+SESVAVADRI  +NLA +L P FDTEL++DLNAFKLPAPWFIYSFMG GILL
Sbjct: 61  ---SFYLSSESVAVADRIMPINLAADLTPGFDTELEIDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEG 180
           CCI LVGCIAAEAISGCCL              +ALVAFI IDRRWEKDLPLDPTGELE 
Sbjct: 121 CCIALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELEE 180

Query: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREPL 240
           LRQFIEDNIDLCKWIGI VISTQALSLLLAIILRSMVSTRKTEYDTEEE+GARDRTREPL
Sbjct: 181 LRQFIEDNIDLCKWIGITVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGARDRTREPL 240

Query: 241 LNPPANQATGGAHFDLWG-RPHEREGI 252
           LNPP NQA+ GAHFDLWG R  E+ G+
Sbjct: 241 LNPPGNQAS-GAHFDLWGARMREKYGL 263

[Close]

BLAST of HG10012087 vs. ExPASy TrEMBL
Match: A0A6J1HHZ4 (tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 218/267 (81.65%), Postives = 233/267 (87.27%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPP-PVPALAPSPA 60
           M RTCCHVSLAFI+KCFNFLQAFVGVSIIVYSAWMLDRWNHH+PVSPPP P+PALAPSPA
Sbjct: 1   MARTCCHVSLAFIIKCFNFLQAFVGVSIIVYSAWMLDRWNHHLPVSPPPSPLPALAPSPA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILL 120
              SFYL+SESVAVADRI  +NLA +LIP FDTEL++DLNAFKLPAPWFIYSFMG GILL
Sbjct: 61  ---SFYLSSESVAVADRIMPINLAADLIPGFDTELEIDLNAFKLPAPWFIYSFMGLGILL 120

Query: 121 CCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEG 180
           CCI LVGCIAAEAISGCCL              +ALVAFI IDRRWEKDLPLDPTGEL+ 
Sbjct: 121 CCIALVGCIAAEAISGCCLCFYNMLIMLFILVEVALVAFIGIDRRWEKDLPLDPTGELKE 180

Query: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEVGARDRTREPL 240
           LRQFIEDNID+CKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE+G RDRTREPL
Sbjct: 181 LRQFIEDNIDVCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEIGVRDRTREPL 240

Query: 241 LNPPANQATGGAHFDLWG-RPHEREGI 252
           LNPP NQA+ GAHFDLWG R  E+ G+
Sbjct: 241 LNPPGNQAS-GAHFDLWGARMREKYGL 263

[Close]

BLAST of HG10012087 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-66
Identity = 138/274 (50.36%), Postives = 180/274 (65.69%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAS 60
           M   CCHVS A ILK  NFLQAF+G+SII+YS WMLD++NHHVPV PPP  P  A SP S
Sbjct: 1   MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDS 60

Query: 61  SVSF-----YLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGF 120
           S SF      +NS S ++ + I    ++  ++     +   +L +  LPAPWFIY FM  
Sbjct: 61  SYSFSNSIIEINSVSDSLKNPIDF--VSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAI 120

Query: 121 GILLCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTG 180
           GIL+C +T++G IAAEAI+GCCL               ALV FI IDR WEKDLP DPTG
Sbjct: 121 GILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTG 180

Query: 181 ELEGLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEV-GARDR 240
           EL  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R
Sbjct: 181 ELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSR 240

Query: 241 TREPLLNPPANQ-ATGGAHFDLW-GRPHEREGIV 253
            R+ LL P ANQ ++G ++ D W  R  E+ G++
Sbjct: 241 ARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLI 272

[Close]

BLAST of HG10012087 vs. TAIR 10
Match: AT4G28770.2 (Tetraspanin family protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-66
Identity = 138/274 (50.36%), Postives = 180/274 (65.69%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPAS 60
           M   CCHVS A ILK  NFLQAF+G+SII+YS WMLD++NHHVPV PPP  P  A SP S
Sbjct: 45  MRHNCCHVSFASILKILNFLQAFIGISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDS 104

Query: 61  SVSF-----YLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGF 120
           S SF      +NS S ++ + I    ++  ++     +   +L +  LPAPWFIY FM  
Sbjct: 105 SYSFSNSIIEINSVSDSLKNPIDF--VSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAI 164

Query: 121 GILLCCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTG 180
           GIL+C +T++G IAAEAI+GCCL               ALV FI IDR WEKDLP DPTG
Sbjct: 165 GILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTG 224

Query: 181 ELEGLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEEV-GARDR 240
           EL  LR FIE+NID+CKW+GI+V++ Q LSLLLA++LR+MVS R++E D E++      R
Sbjct: 225 ELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSR 284

Query: 241 TREPLLNPPANQ-ATGGAHFDLW-GRPHEREGIV 253
            R+ LL P ANQ ++G ++ D W  R  E+ G++
Sbjct: 285 ARDNLLGPQANQTSSGSSNIDNWRSRIREKYGLI 316

[Close]

BLAST of HG10012087 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-61
Identity = 135/269 (50.19%), Postives = 172/269 (63.94%), Query Frame = 0


Query: 1   MGRTCCHVSLAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSP-A 60
           M R CCHVS A  LK  NF+QAF+GVSII+YS WML  ++ H+PV PPP   + + +  A
Sbjct: 1   MRRNCCHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIA 60

Query: 61  SSVSFYLNSESVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILL 120
           +SVS  L +      D + ++ L +N       +   +L +  LPAPWFIYSFM  GIL+
Sbjct: 61  TSVSEPLKNP----IDFVASIILGSN-----GGDHGFNLRSLDLPAPWFIYSFMAVGILV 120

Query: 121 CCITLVGCIAAEAISGCCL--------------LALVAFIAIDRRWEKDLPLDPTGELEG 180
           C +T +G IAAEAI+GCCL               ALVA+IAIDR WEKDLP DPTGEL  
Sbjct: 121 CIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSS 180

Query: 181 LRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEE-EVGARDRTREP 240
           LR FIE+NID+CKW+GI V++ Q LSLLLA++LR+MVST K E D EE +   R RT +P
Sbjct: 181 LRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDENPRSRTWDP 240

Query: 241 LLNPPANQA-TGGAHFDLW-GRPHEREGI 252
           LL P  NQA  G +  + W  R  E+ G+
Sbjct: 241 LLGPQGNQAPAGSSKIENWSSRIREKYGL 260

[Close]

BLAST of HG10012087 vs. TAIR 10
Match: AT2G20740.1 (Tetraspanin family protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 63/219 (28.77%), Postives = 101/219 (46.12%), Query Frame = 0


Query: 10  LAFILKCFNFLQAFVGVSIIVYSAWMLDRWNHHVPVSPPPPVPALAPSPASSVSFYLNSE 69
           L  +LK  N L   VG+++I+Y+ W++ +W   +   P                 + +S+
Sbjct: 9   LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLP-----------------FADSD 68

Query: 70  SVAVADRITALNLATNLIPEFDTELKLDLNAFKLPAPWFIYSFMGFGILLCCITLVGCIA 129
                                             P PWFIYSF+G G +LC +T  G IA
Sbjct: 69  H---------------------------------PVPWFIYSFLGLGAILCVVTCAGHIA 128

Query: 130 AEAISGCCLLALVAFIA--------------IDRRWEKDLPLDPTGELEGLRQFIEDNID 189
           AE ++GCCL   + FI               ++R W+KD P DP+G      +FIE N  
Sbjct: 129 AETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFK 177

Query: 190 LCKWIGIIVISTQALSLLLAIILRSMVSTRKTEYDTEEE 215
           +CKWIG+ ++  Q LS+L+A++L+++       YD+++E
Sbjct: 189 ICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDE 177

[Close]

BLAST of HG10012087 vs. TAIR 10
Match: AT2G20740.2 (Tetraspanin family protein )

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-23
Identity = 50/125 (40.00%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 104 PAPWFIYSFMGFGILLCCITLVGCIAAEAISGCCLLALVAFIA--------------IDR 163
           P PWFIYSF+G G +LC +T  G IAAE ++GCCL   + FI               ++R
Sbjct: 12  PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 71

Query: 164 RWEKDLPLDPTGELEGLRQFIEDNIDLCKWIGIIVISTQALSLLLAIILRSMVSTRKTEY 215
            W+KD P DP+G      +FIE N  +CKWIG+ ++  Q LS+L+A++L+++       Y
Sbjct: 72  DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 131

The following BLAST results are available for this feature:

BLAST of HG10012087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888178.1	3.5e-122	86.47	tetraspanin-20 [Benincasa hispida]	[more]
KAA0037895.1	1.1e-115	84.27	tetraspanin-18 [Cucumis melo var. makuwa] >TYJ98029.1 tetraspanin-18 [Cucumis me...	[more]
XP_008447349.1	1.1e-115	84.27	PREDICTED: tetraspanin-18 [Cucumis melo]	[more]
XP_004152011.1	3.2e-115	83.58	tetraspanin-18 [Cucumis sativus] >KGN58325.1 hypothetical protein Csa_017444 [Cu...	[more]
KAG6571566.1	7.8e-114	82.40	Tetraspanin-18, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of HG10012087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVU4	5.3e-65	50.36	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q93XY5	4.0e-60	50.19	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q940P5	3.3e-22	28.77	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]
Q9C5W7	1.0e-15	28.57	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]

BLAST of HG10012087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8U7	5.3e-116	84.27	Tetraspanin-18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00590...	[more]
A0A1S3BH71	5.3e-116	84.27	tetraspanin-18 OS=Cucumis melo OX=3656 GN=LOC103489821 PE=4 SV=1	[more]
A0A0A0L8P5	1.5e-115	83.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G622440 PE=4 SV=1	[more]
A0A6J1HWE7	1.1e-113	82.02	tetraspanin-20-like OS=Cucurbita maxima OX=3661 GN=LOC111466873 PE=4 SV=1	[more]
A0A6J1HHZ4	1.4e-113	81.65	tetraspanin-20-like OS=Cucurbita moschata OX=3662 GN=LOC111463811 PE=4 SV=1	[more]

BLAST of HG10012087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28770.1	3.8e-66	50.36	Tetraspanin family protein	[more]
AT4G28770.2	3.8e-66	50.36	Tetraspanin family protein	[more]
AT2G20230.1	2.8e-61	50.19	Tetraspanin family protein	[more]
AT2G20740.1	2.3e-23	28.77	Tetraspanin family protein	[more]
AT2G20740.2	3.0e-23	40.00	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..231
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 3..235
None	No IPR available	PANTHER	PTHR19282:SF453	TETRASPANIN-20	coord: 3..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012087.1	HG10012087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane