HG10012062 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012062
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal protein L23
Location	Chr01: 17086693 .. 17091061 (-)
RNA-Seq Expression	HG10012062
Synteny	HG10012062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGAGTACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACCAAATCTCTCCTTCTTCACTCCTCTCTTTCACCTCCTGTCCGCCATGGTTTCTTCTTTCAGAGCTCCCACATCCCTAAAAATGGCGTCCCCATTCACTTCTTCCCTTCATCTCCAACTTCTCTAGACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAACGGCCTCCTTCTCTGCGGCAAACCCAATAAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTAAAAATCGGGTTCCATTCTCACGATTCTGTTTCTTTCGCCATCCTTCGATTTGTCAATTTTGGGATTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGATTTGGCTACCGATTCATTGTTTTTGCCCTTCGAAGGCCCATCGGCGGTTGTTTTGAACGGGGTGTTTTACTGGTTGGAGTTTAATTCCATTATTTATGCCTTTGATCTGCTAAGAAATGAGTTTTTTGTAGTGGGGTTTCCGTCTGAAGAAACAGAGTATCGCCTGAATGTGTTGTTCCGGTGCCTCGCCGTTGCCGGTGGGAAGCTGCTGATGGCGTCGACCGATGGGAAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGCTTGTTCGTGGGGTTTGAAGTGTAGATTAAGCGTTGAAACTCTTGTAGGCATTAACGCAAACACCTTGTCTGCAACGGCGGCGACTGAGCGGAGATTTGTTGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAGATTGTTCATAAATTTGGTAGAGCTTTGGAGTGTACGGACGTTTCTAACTTCACGTTTTTCCCTTATGAGTCCCTCTAGGCTCTCTAGCTAGGTTATTATTTATTTTGGTTTGGAATTTTCAATTTTAGTTTATTTAATAAATATTAAAATTTAATATTCCAAAGTTAATTTTTATTAAAATTAGCTAAATAATAATAAGAATAATAAGCATTTGATTCTTTGTTCAATTTTAGTTTTTATATTCTTAATTCTCCAATTTTAATCTAATATACTTTCAATAAATTTCAAATATAGTCTCTCGAAGTTAATTTTTACCGAAATTGGTTGAATAAGAATTATAATTTTCATACAAAGAAATACACTATGTAAATATGTTTTCAAAAATTATAATATAAATGCTAATATATATATAACAAATTTTTTTTAAAAAAGAAAATCAATAATAAATTAGTTGTGGATACTAAATTTAAGATATATTGAAATTATAAGAACTAAAATTGAACAAATTTTAAAGTATAGAAACCAATATGATATTTAAATCTAATAACAATAATTTTTACGGAAGAAAATATAATATGCAAATATATTTTCACAGTTTCGTGTGAAAATACTAATAAACAATAAAAAAAACATTGTTTTCAAATATAAAAAAATGAGTAGATAGTGAAAATTTTATATATTTGTAACTAGTTTGATATTTTTTTTCTATTTTCATACAAAATTTTGAAAAAATTAAGAATTAAATTGATTTTTTTTAAATGTATAGAGACTCAATTTTGAAATTTAGAAGTATAAAGAATAAATTGAATAAAAAATCAAAATGATAGCATTATGTAAAATTAAAAGTAAGAATTAAATTTATTTATTTATTTATTTTTTTTTTTAATTTTTAAGTTTAGTTCTGAATGTTAGCATGAATTTGAGTACAATTTAGTGGATAAAATTATCATATCTAAGGTCAAGTGTTGATTTGTTTTTTTTCAAAGTACAAAAAAAATAAAAATAAAAATAAAATGGTATTTTGACACTTTTTTTCACTAATAATCACCAATAAAATGTTTTCGAAGTTTAAAAATACAATTAAATTGCATATAATTTTTTATAAATATAATAAATAAATACTATTTAAACTTAGTTATGGTCATTATAAAATTTTAAAAGTAGCAAAATAAATGATTTTTAATTATATAGAAGATAAACACAAACATATTTTAGTAAACAATAAATTTTATAATAGAATTAATTACATACGTCTAACTTTAACTATTATTTATCTCAAATTTTTGTGTATTATATCTCTAGTTCTTATAACTATAAAATTTGTTGTTTCAATTTTTTTTTTACTCTAATATTAACATTTTTATAGTTGCAAAACAAAATATTAACTTTTTTATTTAAAATTTGTGTAACCTTTTTAAATTGTTCTCTCTCAAACTAGGCAAAATAGATATTTATTAAAAACTTAGAGGTAAAATAATTATGTAAAGATTCCCATTCATGATCATTATAATATAAGTGTTATTAATTATTGTTAAAAAAAACAAACAAACAAAATATTATCATGAAACGACGTCGTCTCTTATATGTATATCATGTGAAACGCTCGTTTCGGCTTGGCAACACGCGGAAAGAATAGGAAAAACCTGCATCCAAACAGAGCTACTAAAACCCTAACCCCAGAAATAGCCGATTCTGCGCCGTCGTCTTTCAAATATTAAGAACAGCATTCGTTTGCTGGTCGGAGGAGAGAGAGAGAGAGTGATCGAGACGGCCGCCGGAGAGTCTGTCAACAATGTCGAAGCGAGGTATGGTCTGATCGTTCTATCTCCGTTCATTTTCCTTCTACTGATGTTCCCTTCATACGCTACTGTAAATGCAATAGTTGGTTTGATCTTGTGTTTGCTACTCTTAGATTTGAGATTTGAGATTTGAGATTTGTTGTTGTTGTTTTTGTGTATCTATTTAGGTAGGGGAGGTTCCGCTGGGAACAAATTTAGGATGTCGCTAGGTTTACCTGTGGCGGCTACAGTTAACTGTGCCGACAATACAGGAGCTAAGAACCTTTACATCATTTCGGTGAAGGGGATCAAGGGACGCCTCAACCGTTTGCCATCAGCTTGTGTTGGTGATATGGTCATGGCGACAGTCAAGAAGGGGAAACCTGACCTCAGGAAGAAGGTGCTACCCGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTCATGTACTTTGAAGGTCATACACGACTCAATTTATCTCTTTTGTTCTATTTTCGATAATTTTTTTTAAAAAAAAACAAATCAACTTCTTGATATTAGGTTTGTTTGTCTCGAGTTAGTCGTTCTAATTGACCCCGATCAGTTGGATTGTTGTCTTTTGATGTATTATCAGCGGATAGCCTGATTGAATCGATCTTATTTTAATTTGAAGAATTTTAACTTCCTGATATGGGTCTGGGTATGTTGTTGTTGAACTGTGGGTTAGCAAAGCCTAGAACTCTGTTTGTGATGTTTCATGCTGTTTGTTAATTGTATAGAAGTGACCATCGTTATGGTGTGGAGTGTTTGCCAAAATGGTTTATAAGGGATGTTATTGGGAGTATTTTTGGTGCCTTTCTATTGTAATTCTATGGCAAAGGTTATGCAAGCAGTTGTTTCTATCAAAAAAAAAAAAATCCAGCAATAATGTTCTCGTGATAAGAATGGCTATCAAGTTATGCACTTAAGATTGTATTGTTGTTATTTATGAGAAGGGTTGTTTCACTAATGGAGTTTAACTATTTTCTTTGCTTGTGAGACTGGGTAACTGTCATGTACTTGATATAGACCCATTTAGAATTGAACTTTACAGTTGTTGAATAACAGCTTTCTGGTTTTGCAGATAATGCTGGTGTCATTGTGAACCCCAAAGGAGAGATGAAGGGTATGATCTTCTCCTGCTTTGAACTTTGTGTCAAGTCCATGTGTGGTCTTAAAAAAGGATATGTAACATGCTAATAGTAGGAGATAAATCATCACACCCTGAATATTTTACTTTTTTGTTGGCGTTTTCTATGCCTGGAATTCTGCACCAGAATTTTCATGGTTTTGACCTTACTATGCTGAGACCAAAAAGATTAGAAAGCCAGTTTCATACTTAGCTTAGCTAGAAATGTAGTTTTGGGGTACGGATATCGTACCATCTTGATTTTTCTCTATAATTTGGAGGTGTTTTGGCATTTAAACTGTTGTTACTTTGCTTTCGTGGACTTAAATAGTTTTTTTCTTGGGTCTTTCAGGTTCTGCTATTACAGGCCCAATTGGAAAGGAATGTGCTGATCTCTGGCCCAGAATTGCAAGTGCTGCTAATGCTATTGTTTGA

mRNA sequence

ATGGCGGAAGAGTACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACCAAATCTCTCCTTCTTCACTCCTCTCTTTCACCTCCTGTCCGCCATGGTTTCTTCTTTCAGAGCTCCCACATCCCTAAAAATGGCGTCCCCATTCACTTCTTCCCTTCATCTCCAACTTCTCTAGACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAACGGCCTCCTTCTCTGCGGCAAACCCAATAAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTAAAAATCGGGTTCCATTCTCACGATTCTGTTTCTTTCGCCATCCTTCGATTTGTCAATTTTGGGATTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGATTTGGCTACCGATTCATTGTTTTTGCCCTTCGAAGGCCCATCGGCGGTTGTTTTGAACGGGGTGTTTTACTGGTTGGAGTTTAATTCCATTATTTATGCCTTTGATCTGCTAAGAAATGAGTTTTTTGTAGTGGGGTTTCCGTCTGAAGAAACAGAGTATCGCCTGAATGTGTTGTTCCGGTGCCTCGCCGTTGCCGGTGGGAAGCTGCTGATGGCGTCGACCGATGGGAAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGCTTGTTCGTGGGGTTTGAAGTGTAGATTAAGCGTTGAAACTCTTGTAGGCATTAACGCAAACACCTTGTCTGCAACGGCGGCGACTGAGCGGAGATTTGTTGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAGATTGTTCATAAATTTGGTAGAGCTTTGGAGTGTAGGGGAGGTTCCGCTGGGAACAAATTTAGGATGTCGCTAGGTTTACCTGTGGCGGCTACAGTTAACTGTGCCGACAATACAGGAGCTAAGAACCTTTACATCATTTCGGTGAAGGGGATCAAGGGACGCCTCAACCGTTTGCCATCAGCTTGTGTTGGTGATATGGTCATGGCGACAGTCAAGAAGGGGAAACCTGACCTCAGGAAGAAGGTGCTACCCGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTCATTGTGAACCCCAAAGGAGAGATGAAGGGTTCTGCTATTACAGGCCCAATTGGAAAGGAATGTGCTGATCTCTGGCCCAGAATTGCAAGTGCTGCTAATGCTATTGTTTGA

Coding sequence (CDS)

ATGGCGGAAGAGTACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACCAAATCTCTCCTTCTTCACTCCTCTCTTTCACCTCCTGTCCGCCATGGTTTCTTCTTTCAGAGCTCCCACATCCCTAAAAATGGCGTCCCCATTCACTTCTTCCCTTCATCTCCAACTTCTCTAGACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAACGGCCTCCTTCTCTGCGGCAAACCCAATAAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTAAAAATCGGGTTCCATTCTCACGATTCTGTTTCTTTCGCCATCCTTCGATTTGTCAATTTTGGGATTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGATTTGGCTACCGATTCATTGTTTTTGCCCTTCGAAGGCCCATCGGCGGTTGTTTTGAACGGGGTGTTTTACTGGTTGGAGTTTAATTCCATTATTTATGCCTTTGATCTGCTAAGAAATGAGTTTTTTGTAGTGGGGTTTCCGTCTGAAGAAACAGAGTATCGCCTGAATGTGTTGTTCCGGTGCCTCGCCGTTGCCGGTGGGAAGCTGCTGATGGCGTCGACCGATGGGAAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGCTTGTTCGTGGGGTTTGAAGTGTAGATTAAGCGTTGAAACTCTTGTAGGCATTAACGCAAACACCTTGTCTGCAACGGCGGCGACTGAGCGGAGATTTGTTGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAGATTGTTCATAAATTTGGTAGAGCTTTGGAGTGTAGGGGAGGTTCCGCTGGGAACAAATTTAGGATGTCGCTAGGTTTACCTGTGGCGGCTACAGTTAACTGTGCCGACAATACAGGAGCTAAGAACCTTTACATCATTTCGGTGAAGGGGATCAAGGGACGCCTCAACCGTTTGCCATCAGCTTGTGTTGGTGATATGGTCATGGCGACAGTCAAGAAGGGGAAACCTGACCTCAGGAAGAAGGTGCTACCCGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTCATTGTGAACCCCAAAGGAGAGATGAAGGGTTCTGCTATTACAGGCCCAATTGGAAAGGAATGTGCTGATCTCTGGCCCAGAATTGCAAGTGCTGCTAATGCTATTGTTTGA

Protein sequence

MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFFFQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPSSNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLATDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCLAVAGGKLLMASTDGKFVEIRVLQDRACSWGLKCRLSVETLVGINANTLSATAATERRFVGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALECRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV

Homology

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BLAST of HG10012062 vs. NCBI nr
Match: XP_038888571.1 (putative F-box protein At1g32420 [Benincasa hispida])

HSP 1 Score: 601.7 bits (1550), Expect = 5.6e-168
Identity = 294/344 (85.47%), Postives = 316/344 (91.86%), Query Frame = 0


Query: 1   MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFF 60
           MAEE+NNPL DDITIEILQHFSLRSLA+ANCVSKLWQSFISTKS LLH+ LSPP+RHGFF
Sbjct: 1   MAEEHNNPLTDDITIEILQHFSLRSLAVANCVSKLWQSFISTKS-LLHTPLSPPIRHGFF 60

Query: 61  FQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPS 120
           FQSSHIPKNGVPIHFFPSSPTSL+KTHFPNLRLLASSNGLLLCGKPN+NPII+YSVFNPS
Sbjct: 61  FQSSHIPKNGVPIHFFPSSPTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIIHYSVFNPS 120

Query: 121 SNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLA 180
           +NQLIPIPKPTNLIA+VKIGFHSH+SV+F ILRFVNFGI PMEIF SETGEWRRL FDL 
Sbjct: 121 TNQLIPIPKPTNLIAAVKIGFHSHNSVAFTILRFVNFGIRPMEIFTSETGEWRRLCFDLV 180

Query: 181 TDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCL 240
            DSLFLPFEGPSA VLNGVFYWLEF+S IYAFDLLRNEFF + FP+EETEYR N L RCL
Sbjct: 181 IDSLFLPFEGPSAAVLNGVFYWLEFDSFIYAFDLLRNEFFEMEFPTEETEYRRNALSRCL 240

Query: 241 AVAGGKLLMASTDGKFVEIRVLQDRACSWGLKCRLSVETLVGINANTLSATAAT--ERRF 300
           AV GG+LLMASTDG+FVEIRVLQDR CSWGLKCRLSVETLVGINANTL ATAA    R+F
Sbjct: 241 AVTGGRLLMASTDGEFVEIRVLQDRDCSWGLKCRLSVETLVGINANTLCATAAAADRRKF 300

Query: 301 VGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALEC 343
           +GIVGFQGRDSERIYLNTTE VICCD+ +GKVEIVH+F  +L C
Sbjct: 301 IGIVGFQGRDSERIYLNTTEVVICCDIETGKVEIVHRFDASLGC 343

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BLAST of HG10012062 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_017498 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 1.1e-152
Identity = 272/345 (78.84%), Postives = 299/345 (86.67%), Query Frame = 0


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFFFQSSHIPK 68
           +PDDITIEILQ+FSLRSLAIAN VSKLWQSFI TKSL LH+ LSPP+ HGFFFQSSHIPK
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  NGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPSSNQLIPIP 128
           NG PIHFFPSSPTSL KT+FPNLRLLASSNGLLLC KPN+NPII+YSVFNPS+ QLIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLATDSLFLPF 188
           KP+NLI+SVKIGFHSHDSVSF ILRFVNFG  PMEIFASETGEWRRL F L  D++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCLAVAGGKLL 248
           EGPSAVVLNGVFYWLEFNS IYAFDLLRNEF+ VGFPSEETEY  NVL RCLA+AGG+L+
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTDGKFVEIRVLQDRACSWGLKCRLSVETLVGINANTLSATAATERRFVGIVGFQGRD 308
           MASTDGK VEIRVL++R C WGLKCRL VE++VGIN N L   A +E R VGIVGFQGRD
Sbjct: 246 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESE-RLVGIVGFQGRD 305

Query: 309 SERIYLNTTEDVICCDVGSGKVEIVHKFGRALECRGGSAGNKFRM 354
           SERIY+NTTE VICC VGSGKVEIV++F   LE +  S+   F +
Sbjct: 306 SERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349

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BLAST of HG10012062 vs. NCBI nr
Match: KAA0037964.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 526.9 bits (1356), Expect = 1.8e-145
Identity = 267/343 (77.84%), Postives = 291/343 (84.84%), Query Frame = 0


Query: 1   MAEEYNNP-LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGF 60
           MAEE+N+  +P DITIEILQHFSLRSLAIAN VSKLWQSF+ TKSL LH+  SPP+RHGF
Sbjct: 12  MAEEHNSRFIPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPIRHGF 71

Query: 61  FFQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNP 120
           FFQSSHIPKNG PIHFFPSSPTSL KT FPNLRLLASSNGLLLC KPN+NP I+YSVFNP
Sbjct: 72  FFQSSHIPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTIHYSVFNP 131

Query: 121 SSNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDL 180
           S+ QLIPIPKP+NLI+SVKIGFHSHDSVSF ILRFVNFG  PMEIFASETGEWRRL   L
Sbjct: 132 STTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDLYL 191

Query: 181 ATDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRC 240
             D++FLPFEGPSAVVLNGVFYWLEFNS IYAFDLLRNEF+ VGFP EETEY  +VL RC
Sbjct: 192 DMDTIFLPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEYGRSVLLRC 251

Query: 241 LAVAGGKLLMASTDGKFVEIRVLQDRACSWGLKCRLSVE-TLVGINANTLSATAATERRF 300
           LA+AG +L+MASTDG+ VEIRVL+DR C WGLKCRL VE  +VGIN N+        RR 
Sbjct: 252 LAIAGRRLMMASTDGEVVEIRVLEDRDCLWGLKCRLRVEDVVVGINENS--------RRL 311

Query: 301 VGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALE 342
           VGIVGF   DSERIYLNTTE VICCDVGSGKVEIV++F   LE
Sbjct: 312 VGIVGF---DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILE 343

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BLAST of HG10012062 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 1.8e-134
Identity = 249/346 (71.97%), Postives = 287/346 (82.95%), Query Frame = 0


Query: 1   MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFF 60
           MA   ++ LP+DI IEIL+HFSLRSLA ANCVSKLWQ+ IST  LLLH+++S P+ HGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPS 120
           FQ S I KNGVPIHFFPSS   L+ THF   +L+ASSNGLLLCGK N+NPI+NYSV+NP+
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILN-THF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPT 169

Query: 121 SNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLA 180
           SN+LIPIPKP NL   VKIGFHSHDSVSF ILRF N G+ PMEIF+SETGEWR L+F+LA
Sbjct: 170 SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA 229

Query: 181 TDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCL 240
            DSLFLPFEGPSAVVLNGVFYWLEF S+IYAFDLL+NEF  VGFP EE EYR  V  RCL
Sbjct: 230 MDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCL 289

Query: 241 AVAGGKLLMASTDGKFVEIRVLQDRACS-WGLKCRLSVETLVGINANTL---SATAATER 300
           AVAGG+++MAST+G+ +EI +LQD+A S WGLK RL+VE+LVGI ANTL   +ATAA  R
Sbjct: 290 AVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGR 349

Query: 301 RFVGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALEC 343
           R VGIVGFQ  DSERIYLNTTE V+CCD+GSGKVEIVH+F  +L C
Sbjct: 350 RIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGC 392

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BLAST of HG10012062 vs. NCBI nr
Match: KAG7036294.1 (hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 490.3 bits (1261), Expect = 1.8e-134
Identity = 249/346 (71.97%), Postives = 287/346 (82.95%), Query Frame = 0


Query: 1   MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFF 60
           MA   ++ LP+DI IEIL+HFSLRSLA ANCVSKLWQ+ IST  LLLH+++S P+ HGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPS 120
           FQ S I KNGVPIHFFPSS   L+ THF   +L+ASSNGLLLCGK N+NPI+NYSV+NP+
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILN-THF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPT 169

Query: 121 SNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLA 180
           SN+LIPIPKP NL   VKIGFHSHDSVSF ILRF N G+ PMEIF+SETGEWR L+F+LA
Sbjct: 170 SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA 229

Query: 181 TDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCL 240
            DSLFLPFEGPSAVVLNGVFYWLEF S+IYAFDLL+NEF  VGFP EE EYR  V  RCL
Sbjct: 230 MDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCL 289

Query: 241 AVAGGKLLMASTDGKFVEIRVLQDRACS-WGLKCRLSVETLVGINANTL---SATAATER 300
           AVAGG+++MAST+G+ +EI +LQD+A S WGLK RL+VE+LVGI ANTL   +ATAA  R
Sbjct: 290 AVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGR 349

Query: 301 RFVGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALEC 343
           R VGIVGFQ  DSERIYLNTTE V+CCD+GSGKVEIVH+F  +L C
Sbjct: 350 RIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGC 392

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BLAST of HG10012062 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3)

HSP 1 Score: 272.7 bits (696), Expect = 7.8e-72
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV
Sbjct: 6   RGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 140

[Close]

BLAST of HG10012062 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.9e-71
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV
Sbjct: 6   RGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 140

[Close]

BLAST of HG10012062 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.4e-65
Identity = 122/135 (90.37%), Postives = 128/135 (94.81%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDMVMATV
Sbjct: 6   RGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 139

[Close]

BLAST of HG10012062 vs. ExPASy Swiss-Prot
Match: Q6PC14 (60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.4e-60
Identity = 114/134 (85.07%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMATV
Sbjct: 6   RGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KEC
Sbjct: 66  KKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKEC 125

Query: 463 ADLWPRIASAANAI 477
           ADLWPRIAS A +I
Sbjct: 126 ADLWPRIASNAGSI 139

[Close]

BLAST of HG10012062 vs. ExPASy Swiss-Prot
Match: Q3T057 (60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2)

HSP 1 Score: 233.4 bits (594), Expect = 5.3e-60
Identity = 113/134 (84.33%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATV
Sbjct: 6   RGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KEC
Sbjct: 66  KKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKEC 125

Query: 463 ADLWPRIASAANAI 477
           ADLWPRIAS A +I
Sbjct: 126 ADLWPRIASNAGSI 139

[Close]

BLAST of HG10012062 vs. ExPASy TrEMBL
Match: A0A0A0L8X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 5.5e-153
Identity = 272/345 (78.84%), Postives = 299/345 (86.67%), Query Frame = 0


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFFFQSSHIPK 68
           +PDDITIEILQ+FSLRSLAIAN VSKLWQSFI TKSL LH+ LSPP+ HGFFFQSSHIPK
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  NGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPSSNQLIPIP 128
           NG PIHFFPSSPTSL KT+FPNLRLLASSNGLLLC KPN+NPII+YSVFNPS+ QLIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLATDSLFLPF 188
           KP+NLI+SVKIGFHSHDSVSF ILRFVNFG  PMEIFASETGEWRRL F L  D++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCLAVAGGKLL 248
           EGPSAVVLNGVFYWLEFNS IYAFDLLRNEF+ VGFPSEETEY  NVL RCLA+AGG+L+
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTDGKFVEIRVLQDRACSWGLKCRLSVETLVGINANTLSATAATERRFVGIVGFQGRD 308
           MASTDGK VEIRVL++R C WGLKCRL VE++VGIN N L   A +E R VGIVGFQGRD
Sbjct: 246 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESE-RLVGIVGFQGRD 305

Query: 309 SERIYLNTTEDVICCDVGSGKVEIVHKFGRALECRGGSAGNKFRM 354
           SERIY+NTTE VICC VGSGKVEIV++F   LE +  S+   F +
Sbjct: 306 SERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349

[Close]

BLAST of HG10012062 vs. ExPASy TrEMBL
Match: A0A5A7T3C1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 8.5e-146
Identity = 267/343 (77.84%), Postives = 291/343 (84.84%), Query Frame = 0


Query: 1   MAEEYNNP-LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGF 60
           MAEE+N+  +P DITIEILQHFSLRSLAIAN VSKLWQSF+ TKSL LH+  SPP+RHGF
Sbjct: 12  MAEEHNSRFIPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPIRHGF 71

Query: 61  FFQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNP 120
           FFQSSHIPKNG PIHFFPSSPTSL KT FPNLRLLASSNGLLLC KPN+NP I+YSVFNP
Sbjct: 72  FFQSSHIPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTIHYSVFNP 131

Query: 121 SSNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDL 180
           S+ QLIPIPKP+NLI+SVKIGFHSHDSVSF ILRFVNFG  PMEIFASETGEWRRL   L
Sbjct: 132 STTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDLYL 191

Query: 181 ATDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRC 240
             D++FLPFEGPSAVVLNGVFYWLEFNS IYAFDLLRNEF+ VGFP EETEY  +VL RC
Sbjct: 192 DMDTIFLPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEYGRSVLLRC 251

Query: 241 LAVAGGKLLMASTDGKFVEIRVLQDRACSWGLKCRLSVE-TLVGINANTLSATAATERRF 300
           LA+AG +L+MASTDG+ VEIRVL+DR C WGLKCRL VE  +VGIN N+        RR 
Sbjct: 252 LAIAGRRLMMASTDGEVVEIRVLEDRDCLWGLKCRLRVEDVVVGINENS--------RRL 311

Query: 301 VGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALE 342
           VGIVGF   DSERIYLNTTE VICCDVGSGKVEIV++F   LE
Sbjct: 312 VGIVGF---DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILE 343

[Close]

BLAST of HG10012062 vs. ExPASy TrEMBL
Match: A0A6J1EX93 (F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 8.8e-135
Identity = 249/346 (71.97%), Postives = 287/346 (82.95%), Query Frame = 0


Query: 1   MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFF 60
           MA   ++ LP+DI IEIL+HFSLRSLA ANCVSKLWQ+ IST  LLLH+++S P+ HGFF
Sbjct: 50  MAMNSSSYLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPS 120
           FQ S I KNGVPIHFFPSS   L+ THF   +L+ASSNGLLLCGK N+NPI+NYSV+NP+
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILN-THF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPT 169

Query: 121 SNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLA 180
           SN+LIPIPKP NL   VKIGFHSHDSVSF ILRF N G+ PMEIF+SETGEWR L+F+LA
Sbjct: 170 SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA 229

Query: 181 TDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCL 240
            DSLFLPFEGPSAVVLNGVFYWLEF S+IYAFDLL+NEF  VGFP EE EYR  V  RCL
Sbjct: 230 MDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCL 289

Query: 241 AVAGGKLLMASTDGKFVEIRVLQDRACS-WGLKCRLSVETLVGINANTL---SATAATER 300
           AVAGG+++MAST+G+ +EI +LQD+A S WGLK RL+VE+LVGI ANTL   +ATAA  R
Sbjct: 290 AVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGR 349

Query: 301 RFVGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALEC 343
           R VGIVGFQ  DSERIYLNTTE V+CCD+GSGKVEIVH+F  +L C
Sbjct: 350 RIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGC 392

[Close]

BLAST of HG10012062 vs. ExPASy TrEMBL
Match: A0A6J1KAH8 (F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 7.5e-134
Identity = 247/346 (71.39%), Postives = 286/346 (82.66%), Query Frame = 0


Query: 1   MAEEYNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHSSLSPPVRHGFF 60
           MA   ++ LP+DI IEIL+HFSLRSLA ANCVSKLWQ+ IST  LLLH+++S P+ HGFF
Sbjct: 50  MAMNSSSHLPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFF 109

Query: 61  FQSSHIPKNGVPIHFFPSSPTSLDKTHFPNLRLLASSNGLLLCGKPNKNPIINYSVFNPS 120
           FQ S I KNGVPIHFFPSS   L+ THF   +L++SSNGLLLCGK N+NPI+NYSV+NP+
Sbjct: 110 FQGSTISKNGVPIHFFPSSLNILN-THF--YKLISSSNGLLLCGKSNQNPIVNYSVWNPA 169

Query: 121 SNQLIPIPKPTNLIASVKIGFHSHDSVSFAILRFVNFGINPMEIFASETGEWRRLSFDLA 180
           SN+LIPIPKP NL   VKIGFHSHDSVSF ILRF N G+ PMEIF+SETGEWR L+F+LA
Sbjct: 170 SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLA 229

Query: 181 TDSLFLPFEGPSAVVLNGVFYWLEFNSIIYAFDLLRNEFFVVGFPSEETEYRLNVLFRCL 240
            DSLFLPFEGPSAVVLNGVFYWLEF S+IYAFDLL+NEF  VGFP EE EYR  V  RCL
Sbjct: 230 IDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCL 289

Query: 241 AVAGGKLLMASTDGKFVEIRVLQDRACS-WGLKCRLSVETLVGINANTL---SATAATER 300
           AVAGG+++MAST+G+ +EI +LQD+A S WGLK RL+VE+LVGI ANTL   +ATAA  R
Sbjct: 290 AVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGR 349

Query: 301 RFVGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHKFGRALEC 343
           R VGIVGFQ  DSERIYLNTTE V+CCD+GS KVEIVH+F  +L C
Sbjct: 350 RIVGIVGFQAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGC 392

[Close]

BLAST of HG10012062 vs. ExPASy TrEMBL
Match: A0A4S8KBB2 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb04t11040 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-70
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 328 GKVEIVHKFGRALECRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLN 387
           G++E++      L  RGG+AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLN
Sbjct: 24  GQIELLQDVEARLAGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLN 83

Query: 388 RLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG 447
           RLPSACVGDMVMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKG
Sbjct: 84  RLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKG 143

Query: 448 EMKGSAITGPIGKECADLWPRIASAANAIV 478
           EMKGSAITGPIGKECADLWPRIASAANAIV
Sbjct: 144 EMKGSAITGPIGKECADLWPRIASAANAIV 173

[Close]

BLAST of HG10012062 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 272.7 bits (696), Expect = 5.6e-73
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV
Sbjct: 6   RGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 140

[Close]

BLAST of HG10012062 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 272.7 bits (696), Expect = 5.6e-73
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV
Sbjct: 6   RGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 140

[Close]

BLAST of HG10012062 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 272.7 bits (696), Expect = 5.6e-73
Identity = 133/135 (98.52%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 343 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 402
           RGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV
Sbjct: 6   RGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65

Query: 403 KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 462
           KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC
Sbjct: 66  KKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC 125

Query: 463 ADLWPRIASAANAIV 478
           ADLWPRIASAANAIV
Sbjct: 126 ADLWPRIASAANAIV 140

[Close]

BLAST of HG10012062 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-67
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 353 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 412
           MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK
Sbjct: 1   MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 60

Query: 413 VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 472
           VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA
Sbjct: 61  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 120

Query: 473 ANAIV 478
           ANAIV
Sbjct: 121 ANAIV 125

[Close]

BLAST of HG10012062 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 68.2 bits (165), Expect = 2.1e-11
Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 363 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 422
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AVIV
Sbjct: 8   LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 67

Query: 423 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 478
           R  K  +R +G  + ++DNA V+++ +G  KG+ + G I +E   L + +I S A  ++
Sbjct: 68  RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL 122

The following BLAST results are available for this feature:

BLAST of HG10012062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888571.1	5.6e-168	85.47	putative F-box protein At1g32420 [Benincasa hispida]	[more]
KGN58298.1	1.1e-152	78.84	hypothetical protein Csa_017498 [Cucumis sativus]	[more]
KAA0037964.1	1.8e-145	77.84	F-box protein [Cucumis melo var. makuwa]	[more]
XP_022931048.1	1.8e-134	71.97	F-box protein At1g52495-like [Cucurbita moschata]	[more]
KAG7036294.1	1.8e-134	71.97	hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10012062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49690	7.8e-72	98.52	60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3	[more]
Q07760	3.9e-71	97.04	60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1	[more]
Q9XEK8	5.4e-65	90.37	60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1	[more]
Q6PC14	2.4e-60	85.07	60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1	[more]
Q3T057	5.3e-60	84.33	60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2	[more]

BLAST of HG10012062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X4	5.5e-153	78.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1	[more]
A0A5A7T3C1	8.5e-146	77.84	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 ...	[more]
A0A6J1EX93	8.8e-135	71.97	F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 ...	[more]
A0A6J1KAH8	7.5e-134	71.39	F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV...	[more]
A0A4S8KBB2	1.2e-70	90.00	Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb04t11040 PE=3 SV=...	[more]

BLAST of HG10012062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04480.1	5.6e-73	98.52	Ribosomal protein L14p/L23e family protein	[more]
AT2G33370.1	5.6e-73	98.52	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.1	5.6e-73	98.52	Ribosomal protein L14p/L23e family protein	[more]
AT3G04400.2	1.2e-67	100.00	Ribosomal protein L14p/L23e family protein	[more]
ATCG00780.1	2.1e-11	33.61	ribosomal protein L14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 9..49 e-value: 0.002 score: 27.4
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 9..50 e-value: 3.4E-4 score: 20.4
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 356..477 e-value: 3.2E-60 score: 216.1
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 359..477 e-value: 1.4E-34 score: 118.7
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 343..477
IPR000218	Ribosomal protein L14P	HAMAP	MF_01367	Ribosomal_L14	coord: 356..477 score: 19.384665
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 98..277 e-value: 2.7E-10 score: 37.9
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..45 e-value: 1.8E-5 score: 26.4
None	No IPR available	PANTHER	PTHR11761:SF19	60S RIBOSOMAL PROTEIN L23	coord: 343..477
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 339..477 e-value: 2.9E-53 score: 181.3
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 348..477
IPR019972	Ribosomal protein L14P, conserved site	PROSITE	PS00049	RIBOSOMAL_L14	coord: 416..442
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 100..250
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 9..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012062.1	HG10012062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0030833	regulation of actin filament polymerization
biological_process	GO:0006412	translation
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003779	actin binding
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding