HG10012053 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10012053
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionrho GDP-dissociation inhibitor 1-like
LocationChr01: 17014450 .. 17017932 (+)
RNA-Seq ExpressionHG10012053
SyntenyHG10012053
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTGGGAATAGGCATGAGGAGGAAGCAGGGCCGTCGTCTGCCGGGAAAGTTGATGAGTTCCGGCGGGAAAAGCAGAGTGAGGAGTCCGAGGTCGGAGAAGATGAGGTTGATGATAAAGATGGGTTCACTCCAGGGCCTCTGCTTTCGCTCAAGGAACAGCTTGAGAAGGACAAGGTATCTTTCTCTATCTTCCTCCCATTTTTTTAGTGAGTTTTTTGGGTTGGAGCTTTTAGATTAAAGGGTTTGTTTTGGTTTTCTTGATTTTGTTACTAATTGTTCACTGAGTTAAGTTTTTGAGAAGTGGGTATGAAAAATTAGTAGACTAATGAAGTTTGGTTAGACACAGTTTCTCAACAAACAAACTGAGTATTGTTTGTAGTGTCTTACAGGTTTTGGTAGTAGTTCTTCTTTAAAATGGGATAATACTGATTAGTTTTTGAGATTTTGTTAGTTCAGAATATGCAGGAAAGGAAAGCATGTGCTCATTTTTGCTAAGTGTTCAATGGTCTGAGACTCTGAGCTATGTTGTTATCTATACTCCCTTGATATTTGAACTTTTTATCAGAGGAGAAAAAAAACCACTAATACTTAATACTTGGTGAGGCTTTGCCCACTCAAGGCTAGTTCAGAGTTCTAAGTTTAGTTTACAACTTGGGGCTTGAACCTGATGGGGAGCTTTTTGTCTTAGTTTGGCTCCTTTTGTTTGGGGTTTATTTTTTGTATGCTACTTGTATTCCTTCAATTTTTTTTTTTTTTCTGCGTTAATTTTCATTGAAACTTGGATCATAGAGGTACCTTGGAGCATCCCAAACCCTGTGTAGGGCACCCATTTTTTTTAAATATTTCTTACTCATTCATTAGGCCCCTATTATGAATGTCTATGTTAGGAGGGATAATAAGGGAAAAGATTGTATGGAAATCGGTCTTAGTCTGTTGGGATACCATCTAACAAGGAAAATCTCAAGAATACACCGACAACTCAAAAACACCGAAATATGGAAATATATGAAAATATGTTGTAATATCATAAGAAAAGTAACATGATAACCTAGCCTTTCGAGAGGGCTAGTCTCTCCCAAATTTCCTTAAGGAAATCCCACAAAATTCTTCACACCTCTAATCTTACTCTCACTTACTATTTCTAACCCGAAAGACCTAACAAACTCCTTGTCTAATTACTAGGATATTCCTTATTACTAATCTTACTAATAATCCTACATAGTCTATTAGTTGGACGCATTATGCAGGTGGCCTATAGCAGGGGAGGTAAAGTACTAAGGCAAGTTTTTTGTGGATATTTGATAGGTGGAGTAAAGTAGAAATCATTATGTCAATAGAACAGTGTTCTTGTGGAAAGACTATTAACCTTCTCGAATTGGCTAGGTGTTTGGATGAATTTTGTATCTCGATTTTCATATATTAATCCCTCCCTCCAACTGTGGCTCTGAACCCCATATTTATGTTTCTTTGTGGAGTAGAAACTTTAGAAATCAGTCACTTAGAAAAAGTGGTTTTTGTAGGCTCTTACAATTCTGTTTTAATGTTGATTGTGTCTTTACAGGATGATGAAAGCCTCAGAAGGTGGAAAGAAAAGTTGCTTGGTTGCTTAGAAAGTGATCTGAGTGGTAATTCTCTAATTTGATGATTGGTAACTTTGTGGCACTTGTATTTTGAGTTAACGTTTTGCGCCTTTTTGTGGTACTAGAACAAAGGGATCCTGAAGTCAAGTTTCATTCCATTGGAATTATTTCTGATGAATTTGGGGAAATCAATACTCCATTGCCTGTAAATGAAAATCAAAGTGGTCGTGTCCTTTTTACTCTTCGAGAGGGATCTCGGTATCAACTTAGGTTGGCGTTTACGGTTATGCATAACATCGTCTCTGGCCTGTCCTACTCAAACAAAGTCTGGAGAGGAGGATTGATAGGTAAATAAGATATTATTGTCTTACTGTTCTGGAAGAATGCATTTCAATGTCGAATCTTAGCTAACTTTTTCGAAGTGCTATTCAACATCATCCATTTTTGGGCAGTGTTAGTTTTCTTTTGTTTTGAGTCTAATAATTGTTGTGTTTACTTTTATACTTTTTGTGATTTCGGGAAGATAAGCTCATTTAGTGATTGGTGAATAACCAAGTCTCTGTTTGATAACTATTGGGTTGTTACATTTTTGTTAGTGGTTTTTAAAAATTAAGCTTTAAAGACTACATCTACACATGGATTTCTTTGTTTTCAAAATCTATGGAGACTTTTGGAAATAAGGATCCATTTGGTAACCAATTGGTTTTTGCTAACTAAACTTAATAGTTATGAACACTACTTCCACCTATGGATATCTTTGTCATGTTATCTACTTTTTTAAAAATTCAAACCAAGTTTTGGTTATCAAATGGAGTCGTGTAGTTATAATCATGATCTCACTCAACGCGTACTATCTTTTAGTCTACCCTTTTCCATCTACAACAAAACTTGCATTATGGTATAAAATTATTTACCTTGGAGTTGGCTTTACTTCATATTTTCTCCCCAGGCTTTGTACTTTGTTTTAGGAGGCGCAATATTGTTCGTTTTCTTTTTCCAATCATCTTTTGAGCTTACTTTTTATTCTTTGTTATCGCCATTTATTTTGTTTTCTTTGTAACTTATTATGCTTGTGTTTTTGGCCATCAATATTAGTCGATCGGACTCAAGGAATGTTAGGTACTTTTGCTCCTCAACGCGAACCATATGTGGAAACCTTGGAGGAAGAAACCACTCCTTCTGGTGTACTTGCAAGGGGTATTTACTCTGCAAAGCTAAAGGTATGCAATAAACAAATACATGTTGATGATTATACCATTAGACCAATTTTAAATTTCAAATTTAAGTCTAGAATGTGTAAATCCTGAGTGTAGGTATATTGTTAACCGTCACACTGGCAGTGAAACTCTAATCTCTTGGGACATGTTTGACCAAGGAATAGGAGTTGTGATGTAACCTAAAAAATAAAGCGAGAGAAATCTCCAATAATAAAATCAAAGTTTTTATTATGAATCAAAAGTTATCAAAACAAGAACACAATCCCTATACTTATAGAGAATTGGAAAGCAAACTAATCATAATCTTAATTAATCAAAGAAACTAATCATAATCCTAATAAACCAAGGAAACTAATCCTAATCCTAAACCTAATCAATTAAGGATTTGACCAAGATACCCTAATTTATCCTACATCAAGTTGTTAACTTCACTCTTTATTTGGCCCAATGAGTTTTTAAGCCTATCATGGCCCCACAACTAAAAAAGATCAATTTCATAACTTATCAACTCCTTACACTGTGGCCCAACTAAACAACTCAACTCTTTGTCCTAAACGCCCCCTTTAAGCATTACCAAGAGCCCATATTTTAGTAGTTCTTACTTCTGTTTGAAATTTGAAATTTTGTGCGTCTACAAACGTCTTATAAACATCTTTATGTGTTTTACTCAGCCACTGTAG

mRNA sequence

ATGGAGGTTGGGAATAGGCATGAGGAGGAAGCAGGGCCGTCGTCTGCCGGGAAAGTTGATGAGTTCCGGCGGGAAAAGCAGAGTGAGGAGTCCGAGGTCGGAGAAGATGAGGTTGATGATAAAGATGGGTTCACTCCAGGGCCTCTGCTTTCGCTCAAGGAACAGCTTGAGAAGGACAAGGATGATGAAAGCCTCAGAAGGTGGAAAGAAAAGTTGCTTGGTTGCTTAGAAAGTGATCTGAGTGAACAAAGGGATCCTGAAGTCAAGTTTCATTCCATTGGAATTATTTCTGATGAATTTGGGGAAATCAATACTCCATTGCCTGTAAATGAAAATCAAAGTGGTCGTGTCCTTTTTACTCTTCGAGAGGGATCTCGGTATCAACTTAGGTTGGCGTTTACGGTTATGCATAACATCGTCTCTGGCCTGTCCTACTCAAACAAAGTCTGGAGAGGAGGATTGATAGTCGATCGGACTCAAGGAATGTTAGGTACTTTTGCTCCTCAACGCGAACCATATGTGGAAACCTTGGAGGAAGAAACCACTCCTTCTGGTGTACTTGCAAGGGGTATTTACTCTGCAAAGCTAAAGCCACTGTAG

Coding sequence (CDS)

ATGGAGGTTGGGAATAGGCATGAGGAGGAAGCAGGGCCGTCGTCTGCCGGGAAAGTTGATGAGTTCCGGCGGGAAAAGCAGAGTGAGGAGTCCGAGGTCGGAGAAGATGAGGTTGATGATAAAGATGGGTTCACTCCAGGGCCTCTGCTTTCGCTCAAGGAACAGCTTGAGAAGGACAAGGATGATGAAAGCCTCAGAAGGTGGAAAGAAAAGTTGCTTGGTTGCTTAGAAAGTGATCTGAGTGAACAAAGGGATCCTGAAGTCAAGTTTCATTCCATTGGAATTATTTCTGATGAATTTGGGGAAATCAATACTCCATTGCCTGTAAATGAAAATCAAAGTGGTCGTGTCCTTTTTACTCTTCGAGAGGGATCTCGGTATCAACTTAGGTTGGCGTTTACGGTTATGCATAACATCGTCTCTGGCCTGTCCTACTCAAACAAAGTCTGGAGAGGAGGATTGATAGTCGATCGGACTCAAGGAATGTTAGGTACTTTTGCTCCTCAACGCGAACCATATGTGGAAACCTTGGAGGAAGAAACCACTCCTTCTGGTGTACTTGCAAGGGGTATTTACTCTGCAAAGCTAAAGCCACTGTAG

Protein sequence

MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKPL
Homology
BLAST of HG10012053 vs. NCBI nr
Match: XP_038887564.1 (rho GDP-dissociation inhibitor 1-like [Benincasa hispida])

HSP 1 Score: 370.9 bits (951), Expect = 6.7e-99
Identity = 188/197 (95.43%), Postives = 192/197 (97.46%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG R EEEAGPSSAGKVDEFR EKQSEESEVGE+EVD KDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKRLEEEAGPSSAGKVDEFRWEKQSEESEVGEEEVDGKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGEINTPLPVNENQ+GRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEINTPLPVNENQNGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           LREGSRYQLRL FTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQR+PYVETLEEE
Sbjct: 121 LREGSRYQLRLTFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQRQPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
           TTPSGVLARGIYSAKLK
Sbjct: 181 TTPSGVLARGIYSAKLK 197

BLAST of HG10012053 vs. NCBI nr
Match: XP_011651610.1 (rho GDP-dissociation inhibitor 1 [Cucumis sativus] >KGN58282.1 hypothetical protein Csa_017557 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 5.0e-94
Identity = 180/197 (91.37%), Postives = 187/197 (94.92%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG R EEEAGPSSAGKVDEFR EK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKRLEEEAGPSSAGKVDEFRHEKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE+NTPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVD+TQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
           TTPSG+LARGIYSAKLK
Sbjct: 181 TTPSGILARGIYSAKLK 192

BLAST of HG10012053 vs. NCBI nr
Match: KAA0038008.1 (rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo var. makuwa] >TYK02202.1 rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG   EEEAGPSSAGKVDEFRREK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKTLEEEAGPSSAGKVDEFRREKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE++TPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVDTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
            TPSGVLARGIYSA LK
Sbjct: 181 ITPSGVLARGIYSANLK 192

BLAST of HG10012053 vs. NCBI nr
Match: XP_008447394.1 (PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG   EEEAGPSSAGKVDEFRREK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKTLEEEAGPSSAGKVDEFRREKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE++TPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVDTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
            TPSGVLARGIYSA LK
Sbjct: 181 ITPSGVLARGIYSANLK 192

BLAST of HG10012053 vs. NCBI nr
Match: XP_023532744.1 (rho GDP-dissociation inhibitor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 180/205 (87.80%), Postives = 188/205 (91.71%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRRE--------KQSEESEVGEDEVDDKDGFTPGPLLSL 60
           MEVG R EEEAGPSSAGK+DE R E        KQSEESEVG++EVDDK+GFTPGPLLSL
Sbjct: 1   MEVGKRVEEEAGPSSAGKIDELRGEKLPQTASGKQSEESEVGDEEVDDKEGFTPGPLLSL 60

Query: 61  KEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNEN 120
           KEQ++KDKDDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGEI TPLPVNEN
Sbjct: 61  KEQIDKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEIITPLPVNEN 120

Query: 121 QSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREP 180
           Q GRVLFTLREGSRYQLRL FTVMHNIVSGLSYSNKVWRGGL+VDRTQGMLGTFAPQRE 
Sbjct: 121 QGGRVLFTLREGSRYQLRLTFTVMHNIVSGLSYSNKVWRGGLLVDRTQGMLGTFAPQREQ 180

Query: 181 YVETLEEETTPSGVLARGIYSAKLK 198
           YVETLEEETTPSGVLARG YSAKLK
Sbjct: 181 YVETLEEETTPSGVLARGNYSAKLK 205

BLAST of HG10012053 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-40
Identity = 94/196 (47.96%), Postives = 128/196 (65.31%), Query Frame = 0

Query: 5   NRHEEEAGPSSAGKVDEFRREKQSEESEV--GEDEVDDKDGFTPGPLLSLKEQLEKDKDD 64
           N+  ++   SS  + D+    +Q  ES +   E+E DD      GP  ++KE LEKDKDD
Sbjct: 21  NKDGDDENSSSRTRADDDALSRQMSESSLCATEEEEDDDSKLQLGPQYTIKEHLEKDKDD 80

Query: 65  ESLRRWKEKLLGCLE-SDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFTL 124
           ESLR+WKE+LLG ++ +++ E  DPEV+  S+ IIS    +I   +P N N  G + FTL
Sbjct: 81  ESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKG-MWFTL 140

Query: 125 REGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEET 184
           +EGS+Y L+  F V +NIVSGL Y+N VW+ G+ VDR + MLGTF+PQ EPY   + EET
Sbjct: 141 KEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEET 200

Query: 185 TPSGVLARGIYSAKLK 198
           TPSG+ ARG YSA+ K
Sbjct: 201 TPSGMFARGSYSARTK 215

BLAST of HG10012053 vs. ExPASy Swiss-Prot
Match: Q61599 (Rho GDP-dissociation inhibitor 2 OS=Mus musculus OX=10090 GN=Arhgdib PE=1 SV=3)

HSP 1 Score: 95.9 bits (237), Expect = 5.5e-19
Identity = 61/173 (35.26%), Postives = 94/173 (54.34%), Query Frame = 0

Query: 25  EKQSE-ESEVGEDEVDDKDGFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQ 84
           EK ++ + E  +D++D K  + P P  SLKE  E DKDDESL ++K+ LLG +   +++ 
Sbjct: 3   EKDAQPQLEEADDDLDSKLNYKPPPQKSLKELQEMDKDDESLTKYKKTLLGDVPV-VADP 62

Query: 85  RDPEVKFHSIGIISDEF-GEINTPLPVNENQSGRVLFTLREGSRYQLRLAFTVMHNIVSG 144
             P V    + ++ D   G I   L  +     +  F L+EG  Y++++ F V  +IVSG
Sbjct: 63  TVPNVTVTRLSLVCDSAPGPITMDLTGDLEALKKDTFVLKEGIEYRVKINFKVNKDIVSG 122

Query: 145 LSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAK 196
           L Y    +R G+ VD+   M+G++ P+ E Y      E  P G+LARG Y  K
Sbjct: 123 LKYVQHTYRTGMRVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNK 174

BLAST of HG10012053 vs. ExPASy Swiss-Prot
Match: P52566 (Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-18
Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = 0

Query: 32  EVGEDEVDDKDGFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFH 91
           E  +DE+D K  + P P  SLKE  E DKDDESL ++K+ LLG     +++ + P V   
Sbjct: 12  EDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGD-GPVVTDPKAPNVVVT 71

Query: 92  SIGIISDEF-GEINTPLPVNENQSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVW 151
            + ++ +   G I   L  +     +    L+EGS Y++++ F V  +IVSGL Y    +
Sbjct: 72  RLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVSGLKYVQHTY 131

Query: 152 RGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAK 196
           R G+ VD+   M+G++ P+ E Y      E  P G+LARG Y  K
Sbjct: 132 RTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNK 175

BLAST of HG10012053 vs. ExPASy Swiss-Prot
Match: Q9TU03 (Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-18
Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = 0

Query: 32  EVGEDEVDDKDGFTPGPLLSLKEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFH 91
           E  +DE+D K  + P P  SLKE  E DKDDESL ++K+ LLG     +++   P V   
Sbjct: 11  EEDDDELDGKLNYKPPPQKSLKELQEMDKDDESLTKYKKTLLGD-GPVVADPTAPNVTVT 70

Query: 92  SIGIISDEF-GEINTPLPVNENQSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVW 151
            + ++ +   G I   L  +     +  F L+EG  Y++++ F V  +IVSGL Y    +
Sbjct: 71  RLTLVCESAPGPITMDLTGDLEALKKETFVLKEGVEYRVKINFKVNKDIVSGLKYVQHTY 130

Query: 152 RGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAK 196
           R G+ VD+   M+G++ P+ E Y      E  P G+LARG Y  K
Sbjct: 131 RTGVKVDKATFMVGSYGPRPEEYEFLTPIEEAPKGMLARGTYHNK 174

BLAST of HG10012053 vs. ExPASy Swiss-Prot
Match: O14224 (Rho GDP-dissociation inhibitor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC6F12.06 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-18
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 0

Query: 28  SEESEVGEDEVD---DKDGFTPGPLL------SLKEQLEKDKDDESLRRWKEKL--LGCL 87
           S  +EV  D+ +   + D F  GP +      SL E ++ D +DESL++WK  L   G  
Sbjct: 2   SVNNEVSADQHNPELEDDTFEHGPPVSLGEKKSLNEYMKMDAEDESLQKWKASLGITGTG 61

Query: 88  ESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFTLREGSRYQLRLAFTVM 147
            S  +++R   +   S+ +   +  ++N     +  Q  +  FT++EGS +++ + F V 
Sbjct: 62  YSPSNDRRTVVILKLSLLVDGRDPVDVNMEDAASVEQIRKKGFTIKEGSEFKIGVKFRVQ 121

Query: 148 HNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKL 198
           H ++SGL Y   V R G +VD+T  M+G++ P   PY  T E +  P+G+LARG Y A  
Sbjct: 122 HEVISGLRYVQTVRRRGFVVDKTSTMIGSYGPSETPYDFTSEPDEAPTGMLARGHYEANG 181

BLAST of HG10012053 vs. ExPASy TrEMBL
Match: A0A0A0LC51 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G607630 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94
Identity = 180/197 (91.37%), Postives = 187/197 (94.92%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG R EEEAGPSSAGKVDEFR EK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKRLEEEAGPSSAGKVDEFRHEKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE+NTPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVNTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVD+TQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDQTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
           TTPSG+LARGIYSAKLK
Sbjct: 181 TTPSGILARGIYSAKLK 192

BLAST of HG10012053 vs. ExPASy TrEMBL
Match: A0A5A7T594 (Rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00040 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG   EEEAGPSSAGKVDEFRREK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKTLEEEAGPSSAGKVDEFRREKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE++TPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVDTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
            TPSGVLARGIYSA LK
Sbjct: 181 ITPSGVLARGIYSANLK 192

BLAST of HG10012053 vs. ExPASy TrEMBL
Match: A0A1S3BI82 (rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489856 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93
Identity = 179/197 (90.86%), Postives = 185/197 (93.91%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDK 60
           MEVG   EEEAGPSSAGKVDEFRREK+SEES     EVDDKDGFTPGPLLSLKEQLEKDK
Sbjct: 1   MEVGKTLEEEAGPSSAGKVDEFRREKESEES-----EVDDKDGFTPGPLLSLKEQLEKDK 60

Query: 61  DDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFT 120
           DDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGE++TPLPVNEN+SGRVLFT
Sbjct: 61  DDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEVDTPLPVNENESGRVLFT 120

Query: 121 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180
           L+EGSRYQLRL FTV HNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE
Sbjct: 121 LQEGSRYQLRLTFTVTHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 180

Query: 181 TTPSGVLARGIYSAKLK 198
            TPSGVLARGIYSA LK
Sbjct: 181 ITPSGVLARGIYSANLK 192

BLAST of HG10012053 vs. ExPASy TrEMBL
Match: A0A6J1KAQ9 (rho GDP-dissociation inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491654 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.0e-92
Identity = 179/205 (87.32%), Postives = 188/205 (91.71%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRRE--------KQSEESEVGEDEVDDKDGFTPGPLLSL 60
           MEVG R EEEAGPSSAGK+DE R E        KQSEESEVGE+EVDDK+GFTPGPLLSL
Sbjct: 1   MEVGKRVEEEAGPSSAGKIDELRGEKLPQTASGKQSEESEVGEEEVDDKEGFTPGPLLSL 60

Query: 61  KEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNEN 120
           KEQ++KDKDDESLRRWKEKLLGCLE+DLSEQR+PEVKFHSIGIISDE GEINTPLPV+EN
Sbjct: 61  KEQIDKDKDDESLRRWKEKLLGCLENDLSEQREPEVKFHSIGIISDELGEINTPLPVDEN 120

Query: 121 QSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREP 180
           Q GRVLFTLREGSRYQLRL FTVMHNIVSGLSYSNKVWRGGL+VDRTQGMLGTFAPQRE 
Sbjct: 121 QGGRVLFTLREGSRYQLRLTFTVMHNIVSGLSYSNKVWRGGLLVDRTQGMLGTFAPQREQ 180

Query: 181 YVETLEEETTPSGVLARGIYSAKLK 198
           YVETLEEETTPSGVLARG YSAKLK
Sbjct: 181 YVETLEEETTPSGVLARGNYSAKLK 205

BLAST of HG10012053 vs. ExPASy TrEMBL
Match: A0A6J1ESV0 (rho GDP-dissociation inhibitor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437262 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.6e-92
Identity = 178/205 (86.83%), Postives = 187/205 (91.22%), Query Frame = 0

Query: 1   MEVGNRHEEEAGPSSAGKVDEFRRE--------KQSEESEVGEDEVDDKDGFTPGPLLSL 60
           MEVG R EEEAGPSS GK+DE R E        KQSE+SEVG++EVDDK+GFTPGPLLSL
Sbjct: 1   MEVGKRVEEEAGPSSPGKIDELRGEKLPQTASGKQSEKSEVGDEEVDDKEGFTPGPLLSL 60

Query: 61  KEQLEKDKDDESLRRWKEKLLGCLESDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNEN 120
           KEQ++KDKDDESLRRWKEKLLGCLESDLSEQR+PEVKFHSIGIISDEFGEI TPLPVNEN
Sbjct: 61  KEQIDKDKDDESLRRWKEKLLGCLESDLSEQREPEVKFHSIGIISDEFGEIITPLPVNEN 120

Query: 121 QSGRVLFTLREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREP 180
           Q GRVLFTLREGSRYQLRL FTVMHNIVSGLSYSNKVWRGGL+VDRTQGMLGTFAPQRE 
Sbjct: 121 QGGRVLFTLREGSRYQLRLTFTVMHNIVSGLSYSNKVWRGGLLVDRTQGMLGTFAPQREQ 180

Query: 181 YVETLEEETTPSGVLARGIYSAKLK 198
           YVETLEEETTPSGVLARG YSAKLK
Sbjct: 181 YVETLEEETTPSGVLARGNYSAKLK 205

BLAST of HG10012053 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.8e-41
Identity = 94/196 (47.96%), Postives = 128/196 (65.31%), Query Frame = 0

Query: 5   NRHEEEAGPSSAGKVDEFRREKQSEESEV--GEDEVDDKDGFTPGPLLSLKEQLEKDKDD 64
           N+  ++   SS  + D+    +Q  ES +   E+E DD      GP  ++KE LEKDKDD
Sbjct: 21  NKDGDDENSSSRTRADDDALSRQMSESSLCATEEEEDDDSKLQLGPQYTIKEHLEKDKDD 80

Query: 65  ESLRRWKEKLLGCLE-SDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGRVLFTL 124
           ESLR+WKE+LLG ++ +++ E  DPEV+  S+ IIS    +I   +P N N  G + FTL
Sbjct: 81  ESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVLLVPENGNPKG-MWFTL 140

Query: 125 REGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEET 184
           +EGS+Y L+  F V +NIVSGL Y+N VW+ G+ VDR + MLGTF+PQ EPY   + EET
Sbjct: 141 KEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGTFSPQLEPYNHVMPEET 200

Query: 185 TPSGVLARGIYSAKLK 198
           TPSG+ ARG YSA+ K
Sbjct: 201 TPSGMFARGSYSARTK 215

BLAST of HG10012053 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.5e-37
Identity = 89/191 (46.60%), Postives = 120/191 (62.83%), Query Frame = 0

Query: 10  EAGPSSAGKVDEFRREKQSEESEVGEDEVDDKDGFTPGPLLSLKEQLEKDKDDESLRRWK 69
           EA   ++ K+   R+   S  S   +DE D+      GP+++LKEQLE+DKDDESLRRWK
Sbjct: 11  EASGETSEKMGLSRKNSGSSLSPTEDDEEDEDKKLELGPMIALKEQLERDKDDESLRRWK 70

Query: 70  EKLLGCLE-SDLSEQRDPEVKFHSIGIISDEFGEINTPLPVN--ENQSGRVLFTLREGSR 129
           E+LLG ++  D+ E  DP VK   + I S +  E+   +P +   N  G   FT++EGS+
Sbjct: 71  EQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKG-PWFTIKEGSK 130

Query: 130 YQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEETTPSGV 189
           Y L   F V +NIVSGL Y+N VW+ G+ VD T+ MLGTF+PQ E Y   + EE TPSG+
Sbjct: 131 YTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMPEEMTPSGM 190

Query: 190 LARGIYSAKLK 198
            ARG YSA+ K
Sbjct: 191 FARGSYSARTK 200

BLAST of HG10012053 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-36
Identity = 90/197 (45.69%), Postives = 120/197 (60.91%), Query Frame = 0

Query: 5   NRHEEEAGPSSAGKVDEFRREKQSEES--EVGEDEVDDKDGFTPGPLLSLKEQLEKDKDD 64
           N  E +AG SS     +    K S  S     +DE ++      GP+++LKEQLEKDKDD
Sbjct: 4   NDEEMKAGESSEEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDD 63

Query: 65  ESLRRWKEKLLGCLE-SDLSEQRDPEVKFHSIGIISDEFGEINTPLPVNENQSGR-VLFT 124
           ESLRRWKE+LLG ++  ++ E  DP VK  ++ I S +  ++   +P N   + +   FT
Sbjct: 64  ESLRRWKEQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFT 123

Query: 125 LREGSRYQLRLAFTVMHNIVSGLSYSNKVWRGGLIVDRTQGMLGTFAPQREPYVETLEEE 184
           L+EGS+Y L   F V +NIVSGL YSN VW+ G+ V   + MLGTF+PQ EPY   + EE
Sbjct: 124 LKEGSKYTLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFEE 183

Query: 185 TTPSGVLARGIYSAKLK 198
           T PSG+L RG YS K K
Sbjct: 184 TAPSGLLVRGSYSVKSK 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887564.16.7e-9995.43rho GDP-dissociation inhibitor 1-like [Benincasa hispida][more]
XP_011651610.15.0e-9491.37rho GDP-dissociation inhibitor 1 [Cucumis sativus] >KGN58282.1 hypothetical prot... [more]
KAA0038008.11.2e-9290.86rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo var. makuwa] >TYK... [more]
XP_008447394.11.2e-9290.86PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo][more]
XP_023532744.11.2e-9287.80rho GDP-dissociation inhibitor 1-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9SFC62.5e-4047.96Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV... [more]
Q615995.5e-1935.26Rho GDP-dissociation inhibitor 2 OS=Mus musculus OX=10090 GN=Arhgdib PE=1 SV=3[more]
P525661.6e-1835.76Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3[more]
Q9TU032.7e-1835.76Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3[more]
O142247.9e-1832.60Rho GDP-dissociation inhibitor OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
Match NameE-valueIdentityDescription
A0A0A0LC512.4e-9491.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G607630 PE=3 SV=1[more]
A0A5A7T5946.0e-9390.86Rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3BI826.0e-9390.86rho GDP-dissociation inhibitor 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1KAQ91.0e-9287.32rho GDP-dissociation inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC11149165... [more]
A0A6J1ESV06.6e-9286.83rho GDP-dissociation inhibitor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437... [more]
Match NameE-valueIdentityDescription
AT3G07880.11.8e-4147.96Immunoglobulin E-set superfamily protein [more]
AT1G62450.13.5e-3746.60Immunoglobulin E-set superfamily protein [more]
AT1G12070.12.3e-3645.69Immunoglobulin E-set superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024792Rho GDP-dissociation inhibitor domain superfamilyGENE3D2.70.50.30Coagulation Factor XIII, subunit A, domain 1coord: 40..198
e-value: 4.2E-48
score: 165.5
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 31..197
e-value: 8.9E-57
score: 192.0
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 9..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR10980:SF49RHO GDP-DISSOCIATION INHIBITOR 1-LIKEcoord: 9..197
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 26..197

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10012053.1HG10012053.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007266 Rho protein signal transduction
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity