HG10012042 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012042
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Arabinose 5-phosphate isomerase KdsD
Location	Chr01: 16873077 .. 16875423 (+)
RNA-Seq Expression	HG10012042
Synteny	HG10012042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGTAAGTCCGGTAACACGGAAGAGCTTCTTCGTCTTGTTCCTTGTGCCAGGGCTAAGGGTGCGTTTCTTGTTGCTGTCACCTCTATTGAAGGCAATGTGCTTGCTGGGGTTTGTGATATGAATGTACATTTGCCTCTTGAGCGTGAATTATGCCCTTTTGATTTGGCCCCAGTCACTTCCACTGCGATTCAGATGGTTTTTGGAGATACTGTGGCTATTGCGCTTATGGGTGCGCGGAATTTGACCAAAGAGGAATATGCTACCAATCATCCCGCTGGGAGGATCGGCAAGAGCCTCATTTTCAAGGTTACTTCTGCTTTTGCTTGACTCACTTCATTTTCAGCTGCTTTTCTTTATGTCAATTGGGATTTTTTTTAGGAAATTTTTGGCACAATAATAGGATGGATCTTCAGATAGGTTGAAAGGTCGTGTGGCGCGGTTTGGGAGTTAGCTAGATTTACTGTCACTATGCCCTTTTTATAATTATGATCTGGTTTTATTTTGCTGGATTGGAGCTTTTTTCTGTTGTTTGTTCTTGAGATCTTTCTTTTTGTTGGGCTTGTTTTTTTAGTGTCTTAATTGAACAGTAGGTTGCATTGTTATCTGAGGTAAAAGATAGTTGTCCTTCAACTTCCTCATATTTGGTATAATAAGCAGAAGTTTATTCAAAGTTGCTGGAAATGTCTATTTGAACCATATTTCATTCATTTGAGATTCTAGGAATAAGCTTTGGCTGTACCAAAAACTGTGACATAGAGTCATCTATCTGGAAGTCAGAAACAGAATGGTGTTTCTTGGCAGATCGACTAGTTAACATTCCGCTGTAACTATAAATTTTTTAGTCTTCTCATTTACTCTTATAGGCCAAATGATAGTACAACGAGCAGATCATTGATTAATGACATGTTTGGAAGCGATTCTAAAATGATTAAAACCACTTTTATCATTTTCAAAATTACTTAGAAAATATTTTTAATCATTCAAAATCAATTTTAATAGCATGAAAAATGCGTTTAAAAGTCAAAATTCAATATTAAATTGATTTTGAGTGATTAAAAGTGTGTTTCGGAGTGATTCTAAACACGAAAAACGTGATTTTAACCATTTCAAGATCACTCCCATACATGCACTAAAATAAGTATGGAATTATTCTTTTGTCCCTTTTTTCCCCTCTCCTGTCCTGTTTCCTTCATTATTTGCTCATCCGTTTATTGTCGGTTTCCATAGGTCTTTGTCCAGCGAATTTGAGGGGCATTTCTTTGATCTTGTTGGATCTTGACTGTTTCTGCAGAAACTTTTGGTATTGAGAGACATGTTTGGGTTCTGATTGTTAGTTTATCATGATTTCTTCCTTTTTAGCCGTATTTATGCCTTTTATACTGGCGAGTCCTCTTTCCGTCACTCTGTTCAGTGTCTGCCACACACTCGCCGTGATGGTTTTTCTTCTGAAAGTTGGAAAATGGGAAGACAGCAAAAACCGTCAGTTTTATGCTATCGTTTGAGACTCCTTTGGATGCATTGGCCTGTATTAGTTATTATGAAAGTGGCTTTCTCATTTCTTTTGAAAAAAAGGGGATCTTGGCTATGAAGATATAGTGGAACTGAATTGATTTGTTGCGCTTGACCATAATTTGGGAACTATATCTTATTAAAGAAAGTGATACAAAATGAGACGATCTTGGGTCATAGTCAACAATACAGAACTTGATATTTGTTTAGTTTTGACTGGGTGTAGGTAAAAGATGTGATGAAGAAGCAGAATGAGCTGCCTGTCTGCAAAGAAGGAGATCTAATAATGGATCAATTGGTTGAGCTTACGAGCAAAGGATGTGGATGCCTACTTGTCATAGATGACGAATATCGCCTGATTGGGACATTTACGGACGGTGATTTGAGGCGCACTCTCAAAGCTAGTGGTGAAGCCATCTTCAAGCTCACCGTAGGCGAAATGTGCAACAGGTATGAATATGTAAATTCCCACTGATTTTAGTTGATATCATGAGAGGAAAAATTGCTTAGTAGAAGATCTTGCTGTTTGTTGAACATGTACCAAAACTATAAGTACTGCTACAGAGGATTCAATTTCTTTTTGCTGTTTGTTGTCATTAGAAAATGCCAATATGATCAGAATCTGTTGTAGTTGAGACCTTAGAGATTGATTGTGATGATAAACCATTATGACAGGAAACCAAGAACAATCGATCCCGAGGCAATGGCGGTTGATGCGATGAAAAAGATGGAAGCACCCCCATCTCCTGTGCAATTTCTGCCTGTTATTAATCAGGAAAATATCTTGATTGGCATTGTCACATTACATGGCCTAGTTTCTGCAGGACTTTGA

mRNA sequence

ATGTTTAGTAAGTCCGGTAACACGGAAGAGCTTCTTCGTCTTGTTCCTTGTGCCAGGGCTAAGGGTGCGTTTCTTGTTGCTGTCACCTCTATTGAAGGCAATGTGCTTGCTGGGGTTTGTGATATGAATGTACATTTGCCTCTTGAGCGTGAATTATGCCCTTTTGATTTGGCCCCAGTCACTTCCACTGCGATTCAGATGGTTTTTGGAGATACTGTGGCTATTGCGCTTATGGGTGCGCGGAATTTGACCAAAGAGGAATATGCTACCAATCATCCCGCTGGGAGGATCGGCAAGAGCCTCATTTTCAAGGTAAAAGATGTGATGAAGAAGCAGAATGAGCTGCCTGTCTGCAAAGAAGGAGATCTAATAATGGATCAATTGGTTGAGCTTACGAGCAAAGGATGTGGATGCCTACTTGTCATAGATGACGAATATCGCCTGATTGGGACATTTACGGACGGTGATTTGAGGCGCACTCTCAAAGCTAGTGGTGAAGCCATCTTCAAGCTCACCGTAGGCGAAATGTGCAACAGGAAACCAAGAACAATCGATCCCGAGGCAATGGCGGTTGATGCGATGAAAAAGATGGAAGCACCCCCATCTCCTGTGCAATTTCTGCCTGTTATTAATCAGGAAAATATCTTGATTGGCATTGTCACATTACATGGCCTAGTTTCTGCAGGACTTTGA

Coding sequence (CDS)

ATGTTTAGTAAGTCCGGTAACACGGAAGAGCTTCTTCGTCTTGTTCCTTGTGCCAGGGCTAAGGGTGCGTTTCTTGTTGCTGTCACCTCTATTGAAGGCAATGTGCTTGCTGGGGTTTGTGATATGAATGTACATTTGCCTCTTGAGCGTGAATTATGCCCTTTTGATTTGGCCCCAGTCACTTCCACTGCGATTCAGATGGTTTTTGGAGATACTGTGGCTATTGCGCTTATGGGTGCGCGGAATTTGACCAAAGAGGAATATGCTACCAATCATCCCGCTGGGAGGATCGGCAAGAGCCTCATTTTCAAGGTAAAAGATGTGATGAAGAAGCAGAATGAGCTGCCTGTCTGCAAAGAAGGAGATCTAATAATGGATCAATTGGTTGAGCTTACGAGCAAAGGATGTGGATGCCTACTTGTCATAGATGACGAATATCGCCTGATTGGGACATTTACGGACGGTGATTTGAGGCGCACTCTCAAAGCTAGTGGTGAAGCCATCTTCAAGCTCACCGTAGGCGAAATGTGCAACAGGAAACCAAGAACAATCGATCCCGAGGCAATGGCGGTTGATGCGATGAAAAAGATGGAAGCACCCCCATCTCCTGTGCAATTTCTGCCTGTTATTAATCAGGAAAATATCTTGATTGGCATTGTCACATTACATGGCCTAGTTTCTGCAGGACTTTGA

Protein sequence

MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPVTSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRKPRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL

Homology

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BLAST of HG10012042 vs. NCBI nr
Match: XP_038888766.1 (probable arabinose 5-phosphate isomerase [Benincasa hispida])

HSP 1 Score: 454.1 bits (1167), Expect = 7.0e-124
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGAFL+AVTS+EGNVLAGVCDMNVHLPLERELCPFDLAPV
Sbjct: 125 MFSKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLAGVCDMNVHLPLERELCPFDLAPV 184

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE
Sbjct: 185 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 244

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLV+DDEY LIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 245 GDLIMDQLVELTSKGCGCLLVMDDEYHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 304

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL
Sbjct: 305 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 354

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BLAST of HG10012042 vs. NCBI nr
Match: XP_004151988.1 (probable arabinose 5-phosphate isomerase [Cucumis sativus] >KGN57898.1 hypothetical protein Csa_009774 [Cucumis sativus])

HSP 1 Score: 451.1 bits (1159), Expect = 5.9e-123
Identity = 224/230 (97.39%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGAFL+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 119 MFSKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 178

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIF+VKDVMKKQNELPVCKE
Sbjct: 179 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFRVKDVMKKQNELPVCKE 238

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 239 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 298

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 299 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 348

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BLAST of HG10012042 vs. NCBI nr
Match: XP_008447413.1 (PREDICTED: probable arabinose 5-phosphate isomerase [Cucumis melo])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGA L+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 123 MFSKSGNTEELLRLVPCARAKGALLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 182

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE
Sbjct: 183 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 242

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 243 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 302

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 303 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 352

[Close]

BLAST of HG10012042 vs. NCBI nr
Match: KAA0038031.1 (putative arabinose 5-phosphate isomerase [Cucumis melo var. makuwa] >TYK20571.1 putative arabinose 5-phosphate isomerase [Cucumis melo var. makuwa])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGA L+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 182 MFSKSGNTEELLRLVPCARAKGALLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 241

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE
Sbjct: 242 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 301

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 302 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 361

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 362 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 411

[Close]

BLAST of HG10012042 vs. NCBI nr
Match: XP_023554677.1 (probable arabinose 5-phosphate isomerase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.5 bits (1129), Expect = 1.8e-119
Identity = 217/230 (94.35%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FSKSGNTEELLRLVPCARAKGA+L+AVTS+EGNVLAGVCDMNVHLPLERELCPFDLAPV
Sbjct: 124 LFSKSGNTEELLRLVPCARAKGAYLIAVTSVEGNVLAGVCDMNVHLPLERELCPFDLAPV 183

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCK+
Sbjct: 184 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKK 243

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
            DLIMDQLVELTSKGCGCLLVIDDEY LIGTFTDGDLRRTLKASGEAIFKLTVG+MCNR 
Sbjct: 244 EDLIMDQLVELTSKGCGCLLVIDDEYHLIGTFTDGDLRRTLKASGEAIFKLTVGQMCNRN 303

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ +LIGI+TLHGLVSAGL
Sbjct: 304 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQAMLIGIITLHGLVSAGL 353

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BLAST of HG10012042 vs. ExPASy Swiss-Prot
Match: Q9M1T1 (Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana OX=3702 GN=SETH3 PE=2 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-114
Identity = 202/229 (88.21%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 2   FSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPVT 61
           FSKSG TEELLRLVPCARAKGAFLV++TS+ GN LAGVCDMNVHLPL+RELCPF+LAPVT
Sbjct: 122 FSKSGATEELLRLVPCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVT 181

Query: 62  STAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKEG 121
           STAIQMVFGDT+A+ALM ARNL+KEEYA NHPAGRIGKSLIFKVKDVMKKQ ELPVCKEG
Sbjct: 182 STAIQMVFGDTIAVALMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEG 241

Query: 122 DLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRKP 181
           DLIMDQLVELTSKGCGCLLV+D+  RLIGTFTDGDLRRTLKASGEAIFKL+VGEMCNRKP
Sbjct: 242 DLIMDQLVELTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKP 301

Query: 182 RTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           RTI PE MAV+AMKKME+PPSPVQFLPV+N++N LIGIVTLHGLVSAGL
Sbjct: 302 RTIGPETMAVEAMKKMESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350

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BLAST of HG10012042 vs. ExPASy Swiss-Prot
Match: Q9Z826 (Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 OS=Chlamydia pneumoniae OX=83558 GN=CPn_0526 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43
Identity = 96/232 (41.38%), Postives = 145/232 (62.50%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FSKSG T+ELL  VP  +++ A LVA+TS+  + LA + D+ V LP   EL PF+L P 
Sbjct: 98  LFSKSGETQELLDTVPHLKSRRAILVAITSMPYSNLAALSDLVVILPSVAELDPFNLIPT 157

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
            ST  QM+FGD +A+ L  +R ++   Y  NHP+G++G     KVKD M  + E+P C  
Sbjct: 158 NSTTCQMIFGDFLAMLLFHSRGVSLSTYGKNHPSGQVGMKANGKVKDFMFPKTEVPFCHL 217

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GD +   L   ++ GCGC+ ++D ++RL+G FTDGDLRR+L + G  +  L++ ++    
Sbjct: 218 GDKVSFSLEVFSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMTAN 277

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVI-NQEN-ILIGIVTLHGLVSAGL 231
           PR I  ++    A++ ME+  SPV  LPV+ N+EN  + G++ +H L  AGL
Sbjct: 278 PRCITEDSDIAIALQLMES-SSPVAVLPVLDNEENRHVTGLLHMHTLAKAGL 328

[Close]

BLAST of HG10012042 vs. ExPASy Swiss-Prot
Match: Q9PJZ7 (Uncharacterized protein TC_0679 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0679 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-39
Identity = 84/232 (36.21%), Postives = 137/232 (59.05%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FS SG T E+L  +P  + +  FLV +TS   + LA   D  V LP   EL PF+L P 
Sbjct: 97  LFSNSGETREILEWIPHLKNRQVFLVGITSSPCSSLAVFSDFVVMLPKLEELDPFNLIPT 156

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TST  Q++F D +A+ ++  R ++  +Y  NHP+G+IG     KV+D +  + E+P C  
Sbjct: 157 TSTTCQLLFSDLLAMTVLRCRKISLSDYGKNHPSGQIGLKANGKVRDYLSPRTEVPFCSP 216

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
              + + L  L+S G GC+ V+++++ L+G FTDGDLRR L   G AI +  + ++  RK
Sbjct: 217 SITVSEALTVLSSYGYGCVCVVNEQFELLGIFTDGDLRRGLSECGGAILECPLEQVMTRK 276

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QENILIGIVTLHGLVSAGL 231
           P+ I  ++  +  ++ ME+  +PV  LPV++   +  ++G++ +H L  AGL
Sbjct: 277 PKVISEDSDVLLGLEMMES-GNPVTVLPVVDAQHQRFIVGLLHMHTLARAGL 327

[Close]

BLAST of HG10012042 vs. ExPASy Swiss-Prot
Match: O84404 (Uncharacterized protein CT_399 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=CT_399 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-38
Identity = 83/232 (35.78%), Postives = 136/232 (58.62%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FS SG T E+L  +P  + +  FLV +T+   + LA   D  + LP   EL PF+L P 
Sbjct: 97  LFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLEELDPFNLMPT 156

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TST  Q++F D +A+ L+  R ++  +Y +NHP+G+IG     KVKD +  + E+P C  
Sbjct: 157 TSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPFCSP 216

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
              + + L  L+S G GC+ V+++ + L+G FTDGDLRR L   G  I    + ++  R 
Sbjct: 217 LTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIMTRN 276

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN--QENILIGIVTLHGLVSAGL 231
           P+ I  ++  + +++ ME+  +PV  LPV++  Q+  ++G++ +H L  AGL
Sbjct: 277 PKVISEDSDVLLSLEMMES-GNPVTVLPVVDAQQQRFIVGLLHMHALARAGL 327

[Close]

BLAST of HG10012042 vs. ExPASy Swiss-Prot
Match: Q5NGP7 (Arabinose 5-phosphate isomerase KdsD OS=Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) OX=177416 GN=kdsD PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 82/228 (35.96%), Postives = 144/228 (63.16%), Query Frame = 0


Query: 3   SKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPVTS 62
           S SG + E++ L+P  +     ++A+TS   ++LA   ++ ++L +++E CP +LAP +S
Sbjct: 103 SNSGTSSEIMGLLPMIKHLDIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSS 162

Query: 63  TAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKEGD 122
           T   +V GD +AIAL+ A+N +++++A +HP G +G+ LI KV+++M+K NE+P+ K  D
Sbjct: 163 TTATLVLGDALAIALLKAKNFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTD 222

Query: 123 LIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRKPR 182
            I   ++E++ KG G  LV ++   L+G FTDGDLRR  +A      +  + E+  + P+
Sbjct: 223 NIRKAILEISDKGVGNTLVAENN-TLLGIFTDGDLRRMFEAE-SFNSQRAISEVMTKNPK 282

Query: 183 TIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           +I  E MA+ A++KME     +  L V++  + ++GIVT+H L+   L
Sbjct: 283 SISKEEMAITALEKME--KYEITSLAVVDNGHNILGIVTMHDLIKLEL 326

[Close]

BLAST of HG10012042 vs. ExPASy TrEMBL
Match: A0A0A0L7X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379750 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 2.9e-123
Identity = 224/230 (97.39%), Postives = 228/230 (99.13%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGAFL+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 119 MFSKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 178

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIF+VKDVMKKQNELPVCKE
Sbjct: 179 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFRVKDVMKKQNELPVCKE 238

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 239 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 298

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 299 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 348

[Close]

BLAST of HG10012042 vs. ExPASy TrEMBL
Match: A0A5A7T8R2 (Putative arabinose 5-phosphate isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001640 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.4e-123
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGA L+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 182 MFSKSGNTEELLRLVPCARAKGALLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 241

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE
Sbjct: 242 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 301

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 302 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 361

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 362 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 411

[Close]

BLAST of HG10012042 vs. ExPASy TrEMBL
Match: A0A1S3BI02 (probable arabinose 5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103489865 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.4e-123
Identity = 224/230 (97.39%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           MFSKSGNTEELLRLVPCARAKGA L+AVTS+EGNVL GVCDMNVHLPLERELCPFDLAPV
Sbjct: 123 MFSKSGNTEELLRLVPCARAKGALLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 182

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE
Sbjct: 183 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 242

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK
Sbjct: 243 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 302

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQ+ ILIGIVTLHGLVSAGL
Sbjct: 303 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 352

[Close]

BLAST of HG10012042 vs. ExPASy TrEMBL
Match: A0A6J1K051 (probable arabinose 5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111491254 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 216/230 (93.91%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FSKSGNTEELLRLVPCARAKGA+L+AVTS+E NVLAGVCDMNVHLPLERELCPFDLAPV
Sbjct: 123 LFSKSGNTEELLRLVPCARAKGAYLIAVTSVEANVLAGVCDMNVHLPLERELCPFDLAPV 182

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQ+ELPVCKE
Sbjct: 183 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQSELPVCKE 242

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVID+EY LIGTFTDGDLRRTLKASGE IFKLTVG+MCNRK
Sbjct: 243 GDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGQMCNRK 302

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN +N+LIGIVTLHGLVS+GL
Sbjct: 303 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINLQNMLIGIVTLHGLVSSGL 352

[Close]

BLAST of HG10012042 vs. ExPASy TrEMBL
Match: A0A6J1ESW7 (probable arabinose 5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111437435 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 216/230 (93.91%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 1   MFSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPV 60
           +FSKSGNTEELLRLVPCARAKGA+L+AVTS+E NVLAGVCDMNVHLPLERELCPFDLAPV
Sbjct: 123 LFSKSGNTEELLRLVPCARAKGAYLIAVTSVEANVLAGVCDMNVHLPLERELCPFDLAPV 182

Query: 61  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKE 120
           TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQ+ELPVCKE
Sbjct: 183 TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQSELPVCKE 242

Query: 121 GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 180
           GDLIMDQLVELTSKGCGCLLVID+EY LIGTFTDGDLRRTLKASGE IFKLTVG+MCNRK
Sbjct: 243 GDLIMDQLVELTSKGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEGIFKLTVGQMCNRK 302

Query: 181 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           PRTIDPEAMAVDAMKKMEAPPSPVQFLPVIN +N+LIGIVTLHGLVS+GL
Sbjct: 303 PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINLQNMLIGIVTLHGLVSSGL 352

[Close]

BLAST of HG10012042 vs. TAIR 10
Match: AT3G54690.1 (Sugar isomerase (SIS) family protein )

HSP 1 Score: 413.7 bits (1062), Expect = 9.8e-116
Identity = 202/229 (88.21%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 2   FSKSGNTEELLRLVPCARAKGAFLVAVTSIEGNVLAGVCDMNVHLPLERELCPFDLAPVT 61
           FSKSG TEELLRLVPCARAKGAFLV++TS+ GN LAGVCDMNVHLPL+RELCPF+LAPVT
Sbjct: 122 FSKSGATEELLRLVPCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVT 181

Query: 62  STAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFKVKDVMKKQNELPVCKEG 121
           STAIQMVFGDT+A+ALM ARNL+KEEYA NHPAGRIGKSLIFKVKDVMKKQ ELPVCKEG
Sbjct: 182 STAIQMVFGDTIAVALMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEG 241

Query: 122 DLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRKP 181
           DLIMDQLVELTSKGCGCLLV+D+  RLIGTFTDGDLRRTLKASGEAIFKL+VGEMCNRKP
Sbjct: 242 DLIMDQLVELTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKP 301

Query: 182 RTIDPEAMAVDAMKKMEAPPSPVQFLPVINQENILIGIVTLHGLVSAGL 231
           RTI PE MAV+AMKKME+PPSPVQFLPV+N++N LIGIVTLHGLVSAGL
Sbjct: 302 RTIGPETMAVEAMKKMESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350

The following BLAST results are available for this feature:

BLAST of HG10012042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888766.1	7.0e-124	98.26	probable arabinose 5-phosphate isomerase [Benincasa hispida]	[more]
XP_004151988.1	5.9e-123	97.39	probable arabinose 5-phosphate isomerase [Cucumis sativus] >KGN57898.1 hypotheti...	[more]
XP_008447413.1	1.3e-122	97.39	PREDICTED: probable arabinose 5-phosphate isomerase [Cucumis melo]	[more]
KAA0038031.1	1.3e-122	97.39	putative arabinose 5-phosphate isomerase [Cucumis melo var. makuwa] >TYK20571.1 ...	[more]
XP_023554677.1	1.8e-119	94.35	probable arabinose 5-phosphate isomerase [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10012042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1T1	1.4e-114	88.21	Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana OX=3702 GN=SETH...	[more]
Q9Z826	2.2e-43	41.38	Uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547 OS=Chlamydia pneumoniae...	[more]
Q9PJZ7	3.2e-39	36.21	Uncharacterized protein TC_0679 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=2...	[more]
O84404	2.7e-38	35.78	Uncharacterized protein CT_399 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=27...	[more]
Q5NGP7	1.4e-37	35.96	Arabinose 5-phosphate isomerase KdsD OS=Francisella tularensis subsp. tularensis...	[more]

BLAST of HG10012042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7X3	2.9e-123	97.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379750 PE=3 SV=1	[more]
A0A5A7T8R2	6.4e-123	97.39	Putative arabinose 5-phosphate isomerase OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BI02	6.4e-123	97.39	probable arabinose 5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103489865...	[more]
A0A6J1K051	1.9e-119	93.91	probable arabinose 5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1ESW7	1.9e-119	93.91	probable arabinose 5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of HG10012042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54690.1	9.8e-116	88.21	Sugar isomerase (SIS) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 105..162 e-value: 4.4E-5 score: 23.8 coord: 173..228 e-value: 1.2E-7 score: 32.1
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 177..230 score: 10.358976
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 109..168 score: 9.477205
IPR001347	SIS domain	PFAM	PF01380	SIS	coord: 1..75 e-value: 7.5E-6 score: 25.8
IPR001347	SIS domain	PROSITE	PS51464	SIS	coord: 1..83 score: 13.070715
None	No IPR available	GENE3D	3.40.50.10490		coord: 1..99 e-value: 3.2E-28 score: 100.7
None	No IPR available	GENE3D	3.10.580.10		coord: 100..228 e-value: 1.2E-34 score: 121.4
None	No IPR available	PANTHER	PTHR47476	FAMILY NOT NAMED	coord: 1..230
None	No IPR available	PANTHER	PTHR47476:SF3	BNAC04G26110D PROTEIN	coord: 1..230
None	No IPR available	CDD	cd04604	CBS_pair_SIS_assoc	coord: 101..226 e-value: 8.39673E-44 score: 141.75
None	No IPR available	SUPERFAMILY	53697	SIS domain	coord: 2..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012042.1	HG10012042.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901135	carbohydrate derivative metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0097367	carbohydrate derivative binding
molecular_function	GO:0016853	isomerase activity