Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCATATAGTTGAATTTAGAACACCCCAACACCCTTCTCTTGGCAAAAACAATTGGGGCGGAGCTTCTCCTTTGCTAGCTAGAAATATCCCTCATGAAACTCTTGAACTAAGGTATCTCAAACTCAACTCAACTCGTACTCGAGACGAAATCTTTCCTCTTTTAGAAGACGACGACGATGAAAACGGCAATTACTATTTGCCTATCTCGTATACGCCTCGACTACAACGACTCGAAAAGTCGAAGTATGTGAAAGGGAGTTCGTTTTTGTCCAAATTGTCTTTGTCATGGAAAGGAAAGAGGAATACATTGTTAGGCTCAAACTCAAGGAAGAAATGGTTCAAGAAATGGGATTATCAAAATAGGTGGCCTCAAGGCTGGTGCTAA
mRNA sequence
ATGAGGCATATAGTTGAATTTAGAACACCCCAACACCCTTCTCTTGGCAAAAACAATTGGGGCGGAGCTTCTCCTTTGCTAGCTAGAAATATCCCTCATGAAACTCTTGAACTAAGGTATCTCAAACTCAACTCAACTCGTACTCGAGACGAAATCTTTCCTCTTTTAGAAGACGACGACGATGAAAACGGCAATTACTATTTGCCTATCTCGTATACGCCTCGACTACAACGACTCGAAAAGTCGAAGTATGTGAAAGGGAGTTCGTTTTTGTCCAAATTGTCTTTGTCATGGAAAGGAAAGAGGAATACATTGTTAGGCTCAAACTCAAGGAAGAAATGGTTCAAGAAATGGGATTATCAAAATAGGTGGCCTCAAGGCTGGTGCTAA
Coding sequence (CDS)
ATGAGGCATATAGTTGAATTTAGAACACCCCAACACCCTTCTCTTGGCAAAAACAATTGGGGCGGAGCTTCTCCTTTGCTAGCTAGAAATATCCCTCATGAAACTCTTGAACTAAGGTATCTCAAACTCAACTCAACTCGTACTCGAGACGAAATCTTTCCTCTTTTAGAAGACGACGACGATGAAAACGGCAATTACTATTTGCCTATCTCGTATACGCCTCGACTACAACGACTCGAAAAGTCGAAGTATGTGAAAGGGAGTTCGTTTTTGTCCAAATTGTCTTTGTCATGGAAAGGAAAGAGGAATACATTGTTAGGCTCAAACTCAAGGAAGAAATGGTTCAAGAAATGGGATTATCAAAATAGGTGGCCTCAAGGCTGGTGCTAA
Protein sequence
MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDDENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQNRWPQGWC
Homology
BLAST of HG10012021 vs. NCBI nr
Match:
TYK20514.1 (hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 237.7 bits (605), Expect = 5.8e-59
Identity = 110/126 (87.30%), Postives = 119/126 (94.44%), Query Frame = 0
Query: 6 EFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDDE--N 65
EFRTPQHPSLGKNNWGGASPLLARNIPHET+ELRYLKLN++RTRDEIFPL ED+DD+ +
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 66 GNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQNR 125
NYYLP+SYTPRLQRLEK+KYVK +SFLSKLSL WKGKR TLLGSNSRKKWFKKWDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
Query: 126 WPQGWC 130
WPQGWC
Sbjct: 219 WPQGWC 224
BLAST of HG10012021 vs. NCBI nr
Match:
KAG6571514.1 (hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 231.9 bits (590), Expect = 3.2e-57
Identity = 109/129 (84.50%), Postives = 115/129 (89.15%), Query Frame = 0
Query: 1 MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDD 60
MR I+EFRTPQHPSL KNNWGGASPLLARNIPH+TLELRYLKLNS RTRDEIFPLLEDD
Sbjct: 1 MRPILEFRTPQHPSLAKNNWGGASPLLARNIPHDTLELRYLKLNSARTRDEIFPLLEDDQ 60
Query: 61 DENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDY 120
+YYLP+SY PRLQRLEKS+YVKGSSFLSKLSL W+GKR TL G NSRKKWFK WDY
Sbjct: 61 H---SYYLPVSYAPRLQRLEKSRYVKGSSFLSKLSLPWRGKRKTLFGLNSRKKWFKGWDY 120
Query: 121 QNRWPQGWC 130
QNRWPQGWC
Sbjct: 121 QNRWPQGWC 126
BLAST of HG10012021 vs. NCBI nr
Match:
KGN57931.1 (hypothetical protein Csa_009875 [Cucumis sativus])
HSP 1 Score: 230.7 bits (587), Expect = 7.1e-57
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 0
Query: 1 MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDD 60
MRHIVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYLKLN+TRTRDEIFPL ED+
Sbjct: 1 MRHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEV 60
Query: 61 DENGNYYLPISYTPRLQR-LEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWD 120
D+ NYYLPISYT +LQ+ +K+KYV+ +SFLSKLSL WKGKR TLLGSNSRKKWFKKWD
Sbjct: 61 DD--NYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWD 120
Query: 121 YQNRWPQGWC 130
YQNRWPQGWC
Sbjct: 121 YQNRWPQGWC 128
BLAST of HG10012021 vs. NCBI nr
Match:
TYI75034.1 (hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum])
HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0
Query: 2 RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDD 61
R ++EFRTPQHPSLG NNWGGASPLLAR+IP E+LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPAKAD--- 63
Query: 62 ENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQ 121
+ N P Q S+ +G FLSKL WK + TL ++SR++WF +WD +
Sbjct: 64 -HFNCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPK 123
Query: 122 NRWPQGWC 130
NRWPQGWC
Sbjct: 124 NRWPQGWC 124
BLAST of HG10012021 vs. NCBI nr
Match:
MBA0822438.1 (hypothetical protein [Gossypium armourianum])
HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0
Query: 2 RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDD 61
R ++EFRTPQHPSLG NNWGGASPLLAR+IP E+LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSIRNRDEIFPANAD--- 63
Query: 62 ENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQ 121
+ N P Q S+ +G FLSKL WK + TL ++SR++WF +WD +
Sbjct: 64 -HFNCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPK 123
Query: 122 NRWPQGWC 130
NRWPQGWC
Sbjct: 124 NRWPQGWC 124
BLAST of HG10012021 vs. ExPASy TrEMBL
Match:
A0A5D3DAH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00890 PE=4 SV=1)
HSP 1 Score: 237.7 bits (605), Expect = 2.8e-59
Identity = 110/126 (87.30%), Postives = 119/126 (94.44%), Query Frame = 0
Query: 6 EFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDDE--N 65
EFRTPQHPSLGKNNWGGASPLLARNIPHET+ELRYLKLN++RTRDEIFPL ED+DD+ +
Sbjct: 99 EFRTPQHPSLGKNNWGGASPLLARNIPHETIELRYLKLNTSRTRDEIFPLQEDEDDDEVS 158
Query: 66 GNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQNR 125
NYYLP+SYTPRLQRLEK+KYVK +SFLSKLSL WKGKR TLLGSNSRKKWFKKWDYQNR
Sbjct: 159 DNYYLPVSYTPRLQRLEKTKYVKKNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWDYQNR 218
Query: 126 WPQGWC 130
WPQGWC
Sbjct: 219 WPQGWC 224
BLAST of HG10012021 vs. ExPASy TrEMBL
Match:
A0A0A0LCZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 3.4e-57
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 0
Query: 1 MRHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDD 60
MRHIVEFRTPQHPS GKNNWGGASPLLARNIPHETLELRYLKLN+TRTRDEIFPL ED+
Sbjct: 1 MRHIVEFRTPQHPSFGKNNWGGASPLLARNIPHETLELRYLKLNTTRTRDEIFPLQEDEV 60
Query: 61 DENGNYYLPISYTPRLQR-LEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWD 120
D+ NYYLPISYT +LQ+ +K+KYV+ +SFLSKLSL WKGKR TLLGSNSRKKWFKKWD
Sbjct: 61 DD--NYYLPISYTTQLQQHFKKTKYVERNSFLSKLSLPWKGKRETLLGSNSRKKWFKKWD 120
Query: 121 YQNRWPQGWC 130
YQNRWPQGWC
Sbjct: 121 YQNRWPQGWC 128
BLAST of HG10012021 vs. ExPASy TrEMBL
Match:
A0A5D2UEN6 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0
Query: 2 RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDD 61
R ++EFRTPQHPSLG NNWGGASPLLAR+IP E+LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSMRNRDEIFPAKAD--- 63
Query: 62 ENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQ 121
+ N P Q S+ +G FLSKL WK + TL ++SR++WF +WD +
Sbjct: 64 -HFNCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPK 123
Query: 122 NRWPQGWC 130
NRWPQGWC
Sbjct: 124 NRWPQGWC 124
BLAST of HG10012021 vs. ExPASy TrEMBL
Match:
A0A7J9IKX3 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 6.7e-29
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 0
Query: 2 RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDD 61
R ++EFRTPQHPSLG NNWGGASPLLAR+IP E+LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGASPLLARDIPKESLEQRYLRLNSIRNRDEIFPANAD--- 63
Query: 62 ENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQ 121
+ N P Q S+ +G FLSKL WK + TL ++SR++WF +WD +
Sbjct: 64 -HFNCNTPTQAAKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPK 123
Query: 122 NRWPQGWC 130
NRWPQGWC
Sbjct: 124 NRWPQGWC 124
BLAST of HG10012021 vs. ExPASy TrEMBL
Match:
A0A0D2PWJ9 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G252000 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.3e-28
Identity = 70/128 (54.69%), Postives = 85/128 (66.41%), Query Frame = 0
Query: 2 RHIVEFRTPQHPSLGKNNWGGASPLLARNIPHETLELRYLKLNSTRTRDEIFPLLEDDDD 61
R ++EFRTPQHPSLG NNWGG SPLLAR+IP E+LE RYL+LNS R RDEIFP D
Sbjct: 4 RELLEFRTPQHPSLGTNNWGGGSPLLARDIPKESLEQRYLRLNSMRNRDEIFPANAD--- 63
Query: 62 ENGNYYLPISYTPRLQRLEKSKYVKGSSFLSKLSLSWKGKRNTLLGSNSRKKWFKKWDYQ 121
+ N P Q S+ +G FLSKL WK + TL ++SR++WF +WD +
Sbjct: 64 -HFNCNTPTQAGKHGQAPTPSR--RGRGFLSKLMFPWK-ETATLGANSSRRRWFPRWDPK 123
Query: 122 NRWPQGWC 130
NRWPQGWC
Sbjct: 124 NRWPQGWC 124
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK20514.1 | 5.8e-59 | 87.30 | hypothetical protein E5676_scaffold237G00890 [Cucumis melo var. makuwa] | [more] |
| KAG6571514.1 | 3.2e-57 | 84.50 | hypothetical protein SDJN03_28242, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KGN57931.1 | 7.1e-57 | 84.62 | hypothetical protein Csa_009875 [Cucumis sativus] | [more] |
| TYI75034.1 | 1.1e-28 | 55.47 | hypothetical protein E1A91_D07G246700v1 [Gossypium mustelinum] | [more] |
| MBA0822438.1 | 1.4e-28 | 55.47 | hypothetical protein [Gossypium armourianum] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DAH9 | 2.8e-59 | 87.30 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A0A0LCZ1 | 3.4e-57 | 84.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395420 PE=4 SV=1 | [more] |
| A0A5D2UEN6 | 5.1e-29 | 55.47 | Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D07G246700v1 P... | [more] |
| A0A7J9IKX3 | 6.7e-29 | 55.47 | Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_019241 PE=4 S... | [more] |
| A0A0D2PWJ9 | 3.3e-28 | 54.69 | Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G252000 PE=4 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
