HG10012015 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012015
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Poly [ADP-ribose] polymerase
Location	Chr01: 16586569 .. 16589476 (-)
RNA-Seq Expression	HG10012015
Synteny	HG10012015

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTGTACTCACCCATTTCCCTCTTTCACCATTTCCCCACTTTTTTTAGTGCCACTTCCCTGTTGGGTTTTTGGGTTTCTTCGTATAACCCTTCTTGTTAGCTCTAGCAGCATGTTTAGGTTTTCGGTAACTCTGCTTTTGGTTTTCATATTCTTCATTTCGTATCAGTTTATTGGTTATTCTCGTTGCGTTACTCTCCTTATCATTTTCTGTTCGTTTGGAGAATATGCATTTGCTTCCACTTGGAATCGGCTCTCACTGACTTTCGCTTCTTCAAAACCTTTTTTAATGGAGACATTTCATTTTCAATTATGTGGATTTTGAAATGGATAAGTGTTAATTTCCGAAGGGGGTTATTTCAATTCCCTAATTATCAATTCTGGCTGCTAATATTTTTAGTTAACAATGCCTTTTCAGTTCTTTTGGGCTAGTTAGAATTAAGTCTCCTCATATCGTATGCCTTTTAACCTCTCTATTTTAGTGTTTGATTGTTATTTGGTTTCTATCTCACTTAGACGTCCTTCATCGTCCTTGATATATTCTTTGAAATTCATGGTGTGTACCTGTAGTTTGATTATGATGGAACATTCTAATTGTTGATATGCTCTTATTTTTCTGAACCAGATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCGTATGTGTACTAATGATAATTTACCATATGGATTGATGTATAACATCCGAAAAATTTGCTCATTGGTTCGAATTTACCATATGACAAAATTGATGATGTTGAAGGACTTGACTCATTGAGATGAGAAGATCAGTAGAAGATCAGACAATATGTGGAAGACAGCGGAGCTGCAGCTGCAGTGGCTATTATGCCTGTAGAGTGTGGTATTGAAGTTTCGCAAACTTCACGTGCTTCTTGCAAGCACTGCAAACAGAAGATTCTGAAAGGAGGTAGCTTTTTTATCCATATTCTCTTAACATCGTATTCTTTAAATCTGAATATAGTTAGACATCTTTCAGCTTTTAACCCTTTATGTAGTTCGTCTTTCTTATTTGGATTTTTTTGGATTCAAGTTCACACCTATACCAGAAAGGGTTTAAATGCTGTTTTGAGGATTTATAGGTCTTAGATATTAGAAATAACCGGGGATCTTTTTTTAAGGGCAATGGGGTATGCAGAACATGCTTCTATTAATTTTTTTTTTGTATTTTTTTTTTCTCTGTTGTATCATCCATGTCTATGGACTTGTTGAAGAAAAATGTTGATCTAGTTGTAACACAATTTCGAGGTTCGTTTGTCCACTGCCCAAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGGTATGGCCTTCATGTAAATCTGCAAAATATAGTGTTTTTTATGTTCTAATCTCATTCTTTTGTTAACTCTTTTGCGTATTTGTGTGTGTGGATCATAGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTGTAAGTAGGTCCATGAAAAGTACTATTGTTTCAGCAGACCCTCAAAGTTCATCTGATTTGGTGGGAAACTGGAGGTACAAAGTAAACGATTGAGGAAGCTAAAAGATGATCTAAAAAAGCATGTGACAACTGTAGAGTTGCGGGAAATGCTTGAATCTAATGATCAAGATTCAACAGGATCATTGTTTGATTTGCGGGATAGCTGGTAGTCTCTTTCCTTCAAGCCTTCCCCCCTTTCTTTTCTTATAATTGATTGGTATCGAGAGACTAGTATTGGACTTACCCTTTTTCCATGCATTACTCTTTTATGATAATTGTGCTTGCATCTTATGATAATGTTCGAACAAATTTTGTTGATAGGTAGTTGATATATCCTTTTTTTTCTTAGGTATATTTAAATTAGTTGTCGTGGTTTTATTTGCTATACCAAAAGGTTTTTCTTTGTTGCTTTTAATACTGGCACATTTCCTAATTGATGTATATGTCTTGTTTAGTGCTGATGGTATGATGTTTGGAGCACTTGCAAAATGCCCTATCTGTTTTGGTTCGCTACGTTACTCTAGAGACATGTATCGATGTCACACATATCAGTCTGCATGGAGCAAGTGTAGCTACTCTACTCATGCACCAAAGCGCCTTAAAGGGAAGTGGAAAGTCCCAGAAGAGACTGACAACCAATATCTGCAAGGTTTCTGCAAAAACCAATCTTATATGAAAGTAGCATGAATCATGATTTCACATCTAATGGTCTCTTACAGTGGTTTAAATTACAAATCGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGTAAGATCTTTCATTCCAACTTTTGTATACTTCAAATTACTTTCATTGTGCAGAGTGTAGTTGATAACATTTTGTTGAATCTTGCAGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAGTATCCTTTGTACTGTCTTTATCACCTCTTTCGTTAGTCACCATGTAACTCTATGTTAG

mRNA sequence

ATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTGTACTCACCCATTTCCCTCTTTCACCATTTCCCCACTTTTTTTAGTGCCACTTCCCTGTTGGGTTTTTGGGTTTCTTCGTATAACCCTTCTTGTTAGCTCTAGCAGCATGTTTAGGTTTTCGATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCCGGAGCTGCAGCTGCAGTGGCTATTATGCCTGTAGAGTGTGGTATTGAAGTTTCGCAAACTTCACGTGCTTCTTGCAAGCACTGCAAACAGAAGATTCTGAAAGGAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTTGGTTTAAATTACAAATCGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAGTATCCTTTGTACTGTCTTTATCACCTCTTTCGTTAGTCACCATGTAACTCTATGTTAG

Coding sequence (CDS)

ATGGAAGGTGGAATATGCCAAATCTTCTCGATCCTCCTGCAAGACCTGCGAAAATCTCATTCAGAAGGAGAATCTCCGCTTTCGCAAGATGGTTCAGGCCACCCAATTCGACGGCTTAATGCTTGTACTCACCCATTTCCCTCTTTCACCATTTCCCCACTTTTTTTAGTGCCACTTCCCTGTTGGGTTTTTGGGTTTCTTCGTATAACCCTTCTTGTTAGCTCTAGCAGCATGTTTAGGTTTTCGATGTGGAATCATGCTGCCTGCATATTGAAGAAAGAAAAACAGATCAAATCCGGAGCTGCAGCTGCAGTGGCTATTATGCCTGTAGAGTGTGGTATTGAAGTTTCGCAAACTTCACGTGCTTCTTGCAAGCACTGCAAACAGAAGATTCTGAAAGGAGATGGTAAAGGGGCCAAAGGCTTGGCTAGGTACCATGCAAACTGCTACATGGAACAATGTCCATCTACCCAAGTTGAGAAGTTGGGAGGTTGGCAAAACCTCCCACCTTCTGACCAGGCTGCTGTTAGTGCCTTGGTGAAGAAGCTTCCATCCACTGAAAAAAATGAAGAGAAACAGACAACTTCAAAAGCTGGTAAACGTAAAAAAGACACTACTGAAGACCAGGATTCTAAAGTTACCAAGGCTGCAGGAGATGTTTCTTGGTTTAAATTACAAATCGGCGCAAAACCTATTCGATTATTGCCTCCGCCATCTACTGGTAGTGCCACTGGCAATCAAGCTTCTAATAGTCAATCACAATCATCAAGGGCTGAAAGCTTGACTGAGCTAAGAGTTTCCTTCTATGGATTAAAAGATTCCATGGGAGAATGGAAAAGAAAAATTGAGGGTGAAGGTGGAGCCGTTCATGCCAAGATAAAGAAAAGTATCCTTTGTACTGTCTTTATCACCTCTTTCGTTAGTCACCATGTAACTCTATGTTAG

Protein sequence

MEGGICQIFSILLQDLRKSHSEGESPLSQDGSGHPIRRLNACTHPFPSFTISPLFLVPLPCWVFGFLRITLLVSSSSMFRFSMWNHAACILKKEKQIKSGAAAAVAIMPVECGIEVSQTSRASCKHCKQKILKGDGKGAKGLARYHANCYMEQCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAGDVSWFKLQIGAKPIRLLPPPSTGSATGNQASNSQSQSSRAESLTELRVSFYGLKDSMGEWKRKIEGEGGAVHAKIKKSILCTVFITSFVSHHVTLC

Homology

[Close]

BLAST of HG10012015 vs. NCBI nr
Match: XP_038888831.1 (poly [ADP-ribose] polymerase 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-74
Identity = 196/403 (48.64%), Postives = 203/403 (50.37%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIK-------------------------SG 126
           LR   +V ++    F  MWNHAACILKK KQIK                         S 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKAKQIKSIDDVEGLDSLRWEDQQKIRKYVEDSV 91

Query: 127 AAAAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYME 186
           AAAAVA+ PVE GIEVSQTSRASCKHCKQKI+KG        DGKGAKGLA YHANCYME
Sbjct: 92  AAAAVAVTPVESGIEVSQTSRASCKHCKQKIMKGEVRLSTALDGKGAKGLAWYHANCYME 151

Query: 187 QCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSK 246
           Q PSTQVEKL GWQNLPPSDQAAVSALVKK  S  KNEEKQTTSKAGKRKKDT EDQDSK
Sbjct: 152 QSPSTQVEKLAGWQNLPPSDQAAVSALVKKPSSAVKNEEKQTTSKAGKRKKDTVEDQDSK 211

Query: 247 VTKAAGDVS--------------------------------------------------- 302
           VTKA GDVS                                                   
Sbjct: 212 VTKAVGDVSESRSMKNAIVSADPQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREML 271

[Close]

BLAST of HG10012015 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 9.1e-74
Identity = 191/401 (47.63%), Postives = 203/401 (50.62%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIKS-----------------------GAA 126
           LR   +V ++    F  MWNHAACILKKEKQIKS                        + 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKEKQIKSIDDVEGLDLLRWEDQQKIRQYVEDSV 91

Query: 127 AAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQC 186
           AAVA+ PVECGIEVSQTSRA+CKHCKQKI+KG        D KGAKGLARYHANCY+EQC
Sbjct: 92  AAVAVTPVECGIEVSQTSRANCKHCKQKIMKGEVRLSSAVDSKGAKGLARYHANCYIEQC 151

Query: 187 PSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVT 246
           PST VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT
Sbjct: 152 PSTHVEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVT 211

Query: 247 KAAGDVS----------------------------------------------------- 302
           +A GDVS                                                     
Sbjct: 212 RAVGDVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLES 271

[Close]

BLAST of HG10012015 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 9.1e-74
Identity = 191/401 (47.63%), Postives = 203/401 (50.62%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIKS-----------------------GAA 126
           LR   +V ++    F  MWNHAACILKKEKQIKS                        + 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKEKQIKSIDDVEGLDLLRWEDQQKIRQYVEDSV 91

Query: 127 AAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQC 186
           AAVA+ PVECGIEVSQTSRA+CKHCKQKI+KG        D KGAKGLARYHANCY+EQC
Sbjct: 92  AAVAVTPVECGIEVSQTSRANCKHCKQKIMKGEVRLSSAVDSKGAKGLARYHANCYIEQC 151

Query: 187 PSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVT 246
           PST VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT
Sbjct: 152 PSTHVEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVT 211

Query: 247 KAAGDVS----------------------------------------------------- 302
           +A GDVS                                                     
Sbjct: 212 RAVGDVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLES 271

[Close]

BLAST of HG10012015 vs. NCBI nr
Match: XP_038887414.1 (poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 9.1e-74
Identity = 191/401 (47.63%), Postives = 203/401 (50.62%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIKS-----------------------GAA 126
           LR   +V ++    F  MWNHAACILKKEKQIKS                        + 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKEKQIKSIDDVEGLDLLRWEDQQKIRQYVEDSV 91

Query: 127 AAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQC 186
           AAVA+ PVECGIEVSQTSRA+CKHCKQKI+KG        D KGAKGLARYHANCY+EQC
Sbjct: 92  AAVAVTPVECGIEVSQTSRANCKHCKQKIMKGEVRLSSAVDSKGAKGLARYHANCYIEQC 151

Query: 187 PSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVT 246
           PST VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT
Sbjct: 152 PSTHVEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVT 211

Query: 247 KAAGDVS----------------------------------------------------- 302
           +A GDVS                                                     
Sbjct: 212 RAVGDVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLES 271

[Close]

BLAST of HG10012015 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 9.1e-74
Identity = 191/401 (47.63%), Postives = 203/401 (50.62%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIKS-----------------------GAA 126
           LR   +V ++    F  MWNHAACILKKEKQIKS                        + 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKEKQIKSIDDVEGLDLLRWEDQQKIRQYVEDSV 91

Query: 127 AAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQC 186
           AAVA+ PVECGIEVSQTSRA+CKHCKQKI+KG        D KGAKGLARYHANCY+EQC
Sbjct: 92  AAVAVTPVECGIEVSQTSRANCKHCKQKIMKGEVRLSSAVDSKGAKGLARYHANCYIEQC 151

Query: 187 PSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVT 246
           PST VEKL GWQNLPPSD AAVSALVKK PS EKN EKQTTSKAGKRKK T EDQ+SKVT
Sbjct: 152 PSTHVEKLAGWQNLPPSDPAAVSALVKKPPSAEKN-EKQTTSKAGKRKKGTAEDQNSKVT 211

Query: 247 KAAGDVS----------------------------------------------------- 302
           +A GDVS                                                     
Sbjct: 212 RAVGDVSVSRSMKSAIVSADPQNSSDLVSKLEAQSKGLRKLKDDLIKHVTAVELREMLES 271

[Close]

BLAST of HG10012015 vs. ExPASy Swiss-Prot
Match: Q9ZP54 (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=PARP1 PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 109/391 (27.88%), Postives = 146/391 (37.34%), Query Frame = 0


Query: 83  MWNHAACILKKEKQIK------------------------SGAAAAVAI----------- 142
           MWNHA+CILKK KQIK                        SGA +  +            
Sbjct: 49  MWNHASCILKKTKQIKSVDDVEGIESLRWEDQQKIRKYVESGAGSNTSTSTGTSTSSTAN 108

Query: 143 -MPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQCPSTQ 202
              +E GIEVSQTSRA C+ C +KILKG        +G G KGL  +HA C++E   ST+
Sbjct: 109 NAKLEYGIEVSQTSRAGCRKCSEKILKGEVRIFSKPEGPGNKGLMWHHAKCFLEMSSSTE 168

Query: 203 VEKLGGWQNLPPSDQAAVSALVKK-LPS--TEKNEEKQTTSKAG-KRKKDTTEDQDSKVT 262
           +E L GW+++P SDQ A+  LVKK LP+  TE  E +QT S+AG KRK D+ +++ SK+ 
Sbjct: 169 LESLSGWRSIPDSDQEALLPLVKKALPAAKTETAEARQTNSRAGTKRKNDSVDNEKSKLA 228

Query: 263 KAAGDVS----------------------------------------------------- 302
           K++ D+S                                                     
Sbjct: 229 KSSFDMSTSGALQPCSKEKEMEAQTKELWDLKDDLKKYVTSAELREMLEVNEQSTRGSEL 288

[Close]

BLAST of HG10012015 vs. ExPASy Swiss-Prot
Match: Q9ZSV1 (Poly [ADP-ribose] polymerase 1 OS=Zea mays OX=4577 GN=PARP1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.9e-16
Identity = 62/176 (35.23%), Postives = 84/176 (47.73%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIKS----------------------GAAA 126
           LR+  +V +S    F  MWNHA CI  K+ QIKS                      G+A+
Sbjct: 32  LRLGKMVQASQFDGFMPMWNHARCIFSKKNQIKSVDDVEGIDALRWDDQEKIRNYVGSAS 91

Query: 127 A----VAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYM 186
           A     A  P +C IE++ ++R SC+ C +KI KG        + +G KG+  YHANC+ 
Sbjct: 92  AGTSSTAAPPEKCTIEIAPSARTSCRRCSEKITKGSVRLSAKLESEGPKGIPWYHANCFF 151

Query: 187 EQCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTE 208
           E  PS  VEK  GW  L   D+  +  LVKK      NE+    +K  KRKK   +
Sbjct: 152 EVSPSATVEKFSGWDTLSDEDKRTMLDLVKK--DVGNNEQ----NKGSKRKKSEND 201

[Close]

BLAST of HG10012015 vs. ExPASy Swiss-Prot
Match: Q7EYV7 (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PARP1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 73/239 (30.54%), Postives = 104/239 (43.51%), Query Frame = 0


Query: 83  MWNHAACILKKEKQIKS--------------------------GAAAAVAIMPVECGIEV 142
           MWNHA+CIL K+ QIKS                            A++ A +  +C IEV
Sbjct: 49  MWNHASCILSKKNQIKSVDDVEGIDTLRWDDQEKIRNYVGSAPATASSAAAISDKCTIEV 108

Query: 143 SQTSRASCKHCKQKILKGD---GKGAKGLARYHANCYMEQCPSTQVEKLGGWQNLPPSDQ 202
           ++++R SC+ C +KI KG        +G   YHA+C++E  P+  VE   GW+ L   D+
Sbjct: 109 AKSARTSCRRCGEKIKKGTVRVSSKLEGQGWYHASCFLEMSPAATVENFSGWEILSHEDK 168

Query: 203 AAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAGDVSWFKLQIGAKPIR 262
            AV  LVKK    +     QT+SK  KRK +  +  D K  K    +S    +       
Sbjct: 169 RAVLDLVKK----DAPSSGQTSSKGSKRKNNQNDIHDCKAPKIIRSISEGTAE------- 228

Query: 263 LLPPPSTGSATGNQASNSQSQSSRAESLTELRVSFYGLKD------SMGEWKRKIEGEG 287
                  G A  +  SN+ S S   E L E   + + LKD      S  E +  +E  G
Sbjct: 229 -----DKGKAVVSHDSNANS-SDLQEKLKEQSDTLWKLKDELKKHVSTAELRNMLEANG 270

[Close]

BLAST of HG10012015 vs. ExPASy TrEMBL
Match: A0A0A0L7J5 (Poly [ADP-ribose] polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G398930 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 5.9e-71
Identity = 185/412 (44.90%), Postives = 201/412 (48.79%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIK-------------------------SG 126
           LR   +V ++    F  MWNHAACILKK KQIK                         S 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKAKQIKSIDDVEGLDSLRWEDQLKIRQYVEDSV 91

Query: 127 AAAAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYME 186
           AAAAV + P+E GIEVSQTSRASCKHCKQKI+KG        DGKG KGLA YHANCYME
Sbjct: 92  AAAAVVVTPIEYGIEVSQTSRASCKHCKQKIMKGEVRLSTVLDGKGTKGLAWYHANCYME 151

Query: 187 QCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSK 246
           QCPS QVEKL GWQNLPPSDQAA+S LVKK  S  KNEEKQTTSKAGKRKKDT EDQDSK
Sbjct: 152 QCPSAQVEKLAGWQNLPPSDQAAISTLVKKPSSAVKNEEKQTTSKAGKRKKDTAEDQDSK 211

Query: 247 VTKAAGDVS--------------------------------------------------- 306
           VTKA GDVS                                                   
Sbjct: 212 VTKATGDVSESRSMKNAIVSADSQNSADLVSKLEAQSKGLWKLKDDLKKHVTTSELREML 271

Query: 307 ------------------------------------------------------------ 311
                                                                       
Sbjct: 272 ESNDQDSTGSELDLRDRCADGMMFGALAKCPICFGSLCYSRGMYRCHGYQSAWSKCSYST 331

[Close]

BLAST of HG10012015 vs. ExPASy TrEMBL
Match: A0A1S3CFM5 (Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.9e-70
Identity = 181/386 (46.89%), Postives = 191/386 (49.48%), Query Frame = 0


Query: 83  MWNHAACILKKEKQIK-------------------------SGAAAAVAIMPVECGIEVS 142
           MWNHAACILKK KQIK                         S AAAAV + PVE GIEVS
Sbjct: 1   MWNHAACILKKAKQIKSIDDVEGLDSLRWEDQQKIRQYVQDSAAAAAVVVTPVEYGIEVS 60

Query: 143 QTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQCPSTQVEKLGGWQNLP 202
           QT+RASCKHCKQKI+KG        DGKG KGLA YHANCYMEQCPSTQVEKL GWQ+LP
Sbjct: 61  QTARASCKHCKQKIMKGEVRLSTALDGKGTKGLAWYHANCYMEQCPSTQVEKLAGWQSLP 120

Query: 203 PSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSKVTKAAGDVS-------- 262
           PSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDSKVTKA GDVS        
Sbjct: 121 PSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDSKVTKATGDVSESRSVKNA 180

Query: 263 ------------------------------------------------------------ 302
                                                                       
Sbjct: 181 FVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREMLESNDQDSSGSELDLRDR 240

[Close]

BLAST of HG10012015 vs. ExPASy TrEMBL
Match: A0A1S3CFL2 (Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-70
Identity = 185/403 (45.91%), Postives = 198/403 (49.13%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIK-------------------------SG 126
           LR   +V ++    F  MWNHAACILKK KQIK                         S 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKAKQIKSIDDVEGLDSLRWEDQQKIRQYVQDSA 91

Query: 127 AAAAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYME 186
           AAAAV + PVE GIEVSQT+RASCKHCKQKI+KG        DGKG KGLA YHANCYME
Sbjct: 92  AAAAVVVTPVEYGIEVSQTARASCKHCKQKIMKGEVRLSTALDGKGTKGLAWYHANCYME 151

Query: 187 QCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSK 246
           QCPSTQVEKL GWQ+LPPSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDSK
Sbjct: 152 QCPSTQVEKLAGWQSLPPSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDSK 211

Query: 247 VTKAAGDVS--------------------------------------------------- 302
           VTKA GDVS                                                   
Sbjct: 212 VTKATGDVSESRSVKNAFVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREML 271

[Close]

BLAST of HG10012015 vs. ExPASy TrEMBL
Match: A0A5D3C3G5 (Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00050 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 3.8e-70
Identity = 185/403 (45.91%), Postives = 198/403 (49.13%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIK-------------------------SG 126
           LR   +V ++    F  MWNHAACILKK KQIK                         S 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKAKQIKSIDDVEGLDSLRWEDQQKIRQYVQDSA 91

Query: 127 AAAAVAIMPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYME 186
           AAAAV + PVE GIEVSQT+RASCKHCKQKI+KG        DGKG KGLA YHANCYME
Sbjct: 92  AAAAVVVTPVEYGIEVSQTARASCKHCKQKIMKGEVRLSTALDGKGTKGLAWYHANCYME 151

Query: 187 QCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDSK 246
           QCPSTQVEKL GWQ+LPPSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDSK
Sbjct: 152 QCPSTQVEKLAGWQSLPPSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDSK 211

Query: 247 VTKAAGDVS--------------------------------------------------- 302
           VTKA GDVS                                                   
Sbjct: 212 VTKATGDVSESRSVKNAFVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREML 271

[Close]

BLAST of HG10012015 vs. ExPASy TrEMBL
Match: A0A5A7SHK7 (Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00050 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 5.0e-70
Identity = 185/404 (45.79%), Postives = 198/404 (49.01%), Query Frame = 0


Query: 67  LRITLLVSSSSMFRF-SMWNHAACILKKEKQIK-------------------------SG 126
           LR   +V ++    F  MWNHAACILKK KQIK                         S 
Sbjct: 32  LRFGKMVQATQFDGFMPMWNHAACILKKAKQIKSIDDVEGLDSLRWEDQQKIRQYVQDSA 91

Query: 127 AAAAVAIMPVECGIEVSQTSRASCKHCKQKILKG---------DGKGAKGLARYHANCYM 186
           AAAAV + PVE GIEVSQT+RASCKHCKQKI+KG         DGKG KGLA YHANCYM
Sbjct: 92  AAAAVVVTPVEYGIEVSQTARASCKHCKQKIMKGEVVRLSTALDGKGTKGLAWYHANCYM 151

Query: 187 EQCPSTQVEKLGGWQNLPPSDQAAVSALVKKLPSTEKNEEKQTTSKAGKRKKDTTEDQDS 246
           EQCPSTQVEKL GWQ+LPPSDQAAVS LVKK  S  KNEEKQTTSKA KRKKDT EDQDS
Sbjct: 152 EQCPSTQVEKLAGWQSLPPSDQAAVSILVKKPSSAVKNEEKQTTSKASKRKKDTAEDQDS 211

Query: 247 KVTKAAGDVS-------------------------------------------------- 302
           KVTKA GDVS                                                  
Sbjct: 212 KVTKATGDVSESRSVKNAFVSVDSQNSSDLVSKLEAQSKGLWKLKDDLKKHVTTAELREM 271

[Close]

BLAST of HG10012015 vs. TAIR 10
Match: AT2G31320.1 (poly(ADP-ribose) polymerase 2 )

HSP 1 Score: 115.2 bits (287), Expect = 9.8e-26
Identity = 109/391 (27.88%), Postives = 146/391 (37.34%), Query Frame = 0


Query: 83  MWNHAACILKKEKQIK------------------------SGAAAAVAI----------- 142
           MWNHA+CILKK KQIK                        SGA +  +            
Sbjct: 49  MWNHASCILKKTKQIKSVDDVEGIESLRWEDQQKIRKYVESGAGSNTSTSTGTSTSSTAN 108

Query: 143 -MPVECGIEVSQTSRASCKHCKQKILKG--------DGKGAKGLARYHANCYMEQCPSTQ 202
              +E GIEVSQTSRA C+ C +KILKG        +G G KGL  +HA C++E   ST+
Sbjct: 109 NAKLEYGIEVSQTSRAGCRKCSEKILKGEVRIFSKPEGPGNKGLMWHHAKCFLEMSSSTE 168

Query: 203 VEKLGGWQNLPPSDQAAVSALVKK-LPS--TEKNEEKQTTSKAG-KRKKDTTEDQDSKVT 262
           +E L GW+++P SDQ A+  LVKK LP+  TE  E +QT S+AG KRK D+ +++ SK+ 
Sbjct: 169 LESLSGWRSIPDSDQEALLPLVKKALPAAKTETAEARQTNSRAGTKRKNDSVDNEKSKLA 228

Query: 263 KAAGDVS----------------------------------------------------- 302
           K++ D+S                                                     
Sbjct: 229 KSSFDMSTSGALQPCSKEKEMEAQTKELWDLKDDLKKYVTSAELREMLEVNEQSTRGSEL 288

The following BLAST results are available for this feature:

BLAST of HG10012015 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888831.1	2.4e-74	48.64	poly [ADP-ribose] polymerase 1 isoform X1 [Benincasa hispida]	[more]
XP_038887408.1	9.1e-74	47.63	poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]	[more]
XP_038887411.1	9.1e-74	47.63	poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412...	[more]
XP_038887414.1	9.1e-74	47.63	poly [ADP-ribose] polymerase 1-like isoform X6 [Benincasa hispida]	[more]
XP_038887409.1	9.1e-74	47.63	poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]	[more]

BLAST of HG10012015 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZP54	1.4e-24	27.88	Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=PARP1 PE=1 SV=...	[more]
Q9ZSV1	6.9e-16	35.23	Poly [ADP-ribose] polymerase 1 OS=Zea mays OX=4577 GN=PARP1 PE=2 SV=1	[more]
Q7EYV7	2.0e-15	30.54	Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PARP1...	[more]

BLAST of HG10012015 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7J5	5.9e-71	44.90	Poly [ADP-ribose] polymerase OS=Cucumis sativus OX=3659 GN=Csa_3G398930 PE=4 SV=...	[more]
A0A1S3CFM5	2.9e-70	46.89	Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1	[more]
A0A1S3CFL2	3.8e-70	45.91	Poly [ADP-ribose] polymerase OS=Cucumis melo OX=3656 GN=LOC103500369 PE=4 SV=1	[more]
A0A5D3C3G5	3.8e-70	45.91	Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SHK7	5.0e-70	45.79	Poly [ADP-ribose] polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of HG10012015 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31320.1	9.8e-26	27.88	poly(ADP-ribose) polymerase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001510	Zinc finger, PARP-type	SMART	SM01336	zf_PARP_3	coord: 115..181 e-value: 6.5E-10 score: 48.9
IPR001510	Zinc finger, PARP-type	PROSITE	PS50064	PARP_ZN_FINGER_2	coord: 112..134 score: 9.401905
IPR036957	Zinc finger, PARP-type superfamily	GENE3D	3.30.1740.10		coord: 107..195 e-value: 1.4E-11 score: 46.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..259
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 112..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012015.1	HG10012015.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding