HG10011953 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011953
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosome-recycling factor, chloroplastic
LocationChr01: 15711360 .. 15718243 (+)
RNA-Seq ExpressionHG10011953
SyntenyHG10011953
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTAAGAGTTGAAGCAATTGCAAGGGTTAACAAGGTTGGGTTGGGCTAGTTATGGAGGGAATTAGTTGGGACCAAGATTTTGGTGAGAGTGAATGGGAAGAGAGCGGAGATAAATTATATATTTTTTAAATTTTATTAAAATTAAAAATATATATATGCTTAAATAAGGGGCAAAAGACTTTTAAACCTATTTTGTAAAATTAAGGGACCAAAACGATTGAATTGAAACTTTATGAACTTAATGTACCTATATCTAAAAAATATATATATATATTTTTCACTAGTTTAAATATGGGTTAAAATACTTTTTTATCCTTATACTATGGAGTTTGTTCAATTTTAATTTATGTACTTTTTAATAAATCTTAAATTTAGTATTTAAAGATTAATTTTCACTGAAATTGTTTAAATAATAATAATAATATTCTTGTAAAATACAGTATGTAAATATATTTTCAAAATTTATAGTAAAAATATTTTTTTAAAAACATACTAGTAGAGGGGACTAAATTTCAAATTTACTGGAAGTACAAAGGTTAAAATTAAACAAAACTAAAATGATATTTTAACCTATCTGTTGTTTGAGATATGCACATGTTCACTCTATTTGGTGTGTTTCAACTTTCTTTCTAGTCCACTCATTATTGTATATCTCATTTAACTTTTCTTATTAACCTCACTATCATTCCCTACATTCCCTTTTTAATAGGGGTGAAATTATAAAAAATACCGTTTTGAAAACGTTTCTATATTTTTAAAAGTTACAATATTATCTTGTCAAAGATTTAAAACAATCGTAAGATTATAAATCATTTAAAATTTCAGACGGAAGTTGGATATGTAATGATATGGTAGTGACTTAAAATATAATTTTTGAACATTATATAATTTTAGGTCATTATCATATCATTCTAGACCTAAATTTTTGTAATAAGTTATAAAGTATATTTCTACTCTAAGGGCAATTTTTAAACATTCGAGTAAAGATTAAAGATAAAATTGCAATTTTTTAAATAATAGAGATACTTTTGAAACAAATGATAAAGTTCTGAATACCCTGTAAACTATGATGTTGGTTTCAATTAAACTCCAAAACTGCCTCATTGGTAGTAAGTGTTACAAGATCTCGAACCCATGGTTATGGAACCGAATCCATTAGTATGAAACATTTTCTTTTCCAAGTGAAATCCCCTAATATATGAAAGAGTGAAAAAGTGCTTTTGTTGTTGTGGAATAAGAAGTCTTCCTATTTTAATGCAAGTTTCATTTTAATCCTTAAAATTTTAAGTTTCTTTCAAAGAAACTTGTGGAGAAAATATCCTATACTACAGTAGTATGGAAAATTCTCCATACTATCTCCACTTATTGTGTGCCACGCCAACACGTTTTCTAAAATATAGTGAGACTCACTGACATCGATGTGGGGTTCATAAATATTTATGAAGATAGATTTATAGTGTGAACACACATAAAGTATGATACTACGGGAGTACTAGAAATTTTTTCCAATAGGTTTTGTCATTAAATTCATAAACATAAAAGTTTGTATACAATTATGCAAATAAATCTAAATACATACATGGAGAAAATATATATATAAAGACACATGGCACATTGGTGAACCAAATTTGTTATTATCTTCATCTTTTCAATTCTATGTCCCCAATTTATTGCTCTTTTATTTTTTTTTTAAATTTTTTTTAATTTTTAATTTTTTTTTTTGCTAATTCTAAATCCCAAATTGACTTTTAGTATGTATTTGAATTTATTCACTTAAGTAACACATAAATAACACACAAACATTGTCTTGGATAAATTTAATGGCAAGAGCCTTCAAAAATTATTTTGAGAAAAAACTTTGATAACTTTAGAAGTTAAAAAGAAACCTTTTAAGGTATGGAAGTATATTTAAAACCAACTTCGGTTTTTTTTTCAATAATTAAACATTTTTATTTATATTGTTTGTGTTTTTATTTTCCAATTTTAACTTTGATAATGTAAGTTTCAAATGACGTTTGTTGTATCGTGGATAAATCTATTGTCTTGAAAGTAAGATCGACGCGACCTTGGTGCTAAATTGCTTAAGCATGTTACTCTCTAAGGTTAACACAACTCCCGATCTTTGACGTGCACTTGTAGGAGAACGAGTTGAAATCGATAGAAAATTGTTCAGAAAATAATAGATCTAAAGAGAAAAAACGTGAGGAAGAAGAAATGCGAATTTTCTATATAATTTCTTCCAAAAACTAAGAACACTTTTTAAATAAAGAATAATTAAAGAATTAAAAATAAAAATCGTTTTAAAATTAATTAAGATTAATTCTTGGAATTAATAAAAAACAATTGATTCTTGAAATTAATCATAAACCATATTTGGGCCAGCCATGGCCTGCTTTTGAAATAATAGATGCACCACATTATTTTTCAAAATTCAAACTCAAATATCTTTTAATTCTTATCCACAACTGTGAAAGATTGGAATTTGGGTCAGCCATGGCCTGCTTTTGAACTTCAAACTATTTCCTTCCGCCTTATCGTCTTCGATTCCATTCATTTCCGTATCCATGGCGACGCCTTTCTCCTCCACCACCACCTCCGTCCGCCGTTCCGTCTTCCAACCCAAGCAGAACCCCCCTCTCAAAGCCCTCCTCTCACTCCGAGGTACGTCACTCTTCAACACACAATTGGTTTCTCTTTCTACCTTTCTGTTGGTTTGTTTATTCAGGATTTCTTCATCCCCTAATGGCTTGCCTTCTACATTATAACGTAGGGTTAAAATGCGTCAAGTGTGGCTCGAGTACGGCGCATCTTTGTTCATGGAAGTCAGCTTCAAACTACGTCAAGCTCAACCGGGAAGCCCTAGTGCTCTCAACCCAACTATCTGTTTCTGGGAATCTATTGAAAAACAGGCATGTCCTTGTCTTTTATTTCGTTTACTTTCTTATCTGTCTTGCGGCGTTGTATGTACCATGTGAATTGGTGTAAATTGGACACCTTCTGTAAAGTGGTAATGTGGGGCAGCACTATACAAATGTACTATCATTTCGCATTTGTCATTGCCTTATTGCTACGTGAGGTTGATTGTGGTAGTTTTTTTAGTTGTGTCGATCTTCTTCTCCCTCGTTTATTTTGGCTCTGAATTTTTTTAGAAGAGGAGTCGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTAATTGAGAAAGATGTAGTAAGTTCATATGTTCATTGATGTGGAGACTTGTTGTGTCCTATAATTAACCAATCTTATGTTAGTAAAAATCGTGCGGATAACCATCCAATTATTCTCCAGAAAGCAAGGATGGAAAAGACTATCGATACTGTTCGGTCTAGTTTCAATTCAATTAGGACTGGGAGATCAAACCCTGCCATGCTTGATAAGATTGAGGTATATGGCAATTCTTAAATTTAGCTGGTTAGTGGATAGCTGTTTCCTTATGTTTACTCAGCACATTTTCCCCCCAAATCTCAGACGAGCAACATGCCAATACTATGTGTTCTGTACAAAACTGTCTTTGTCGCTTTCATGAATTTTCAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTTTTGGTCCAGCCATATGATAAATCCAGGTATTCAATGTGCCAGTAGCCTGAGTTGAATATATTTAGGAACCTTTTTGGATATGTTGATGTTTTCCCCAATTTCTGTTATTTTAGAATCGTGAACGGGTATAAAACAATAGGAAAAGTTTTCTTCAATCACTTCTTGATTCCTGTCATTTTAGAATTGTGAACGAGTATAAAACAGTAGGTGGTGAATGTGATGATTACCTTTTACCGCGAATCCTTGAATATTGAGGATCTTCGTTGTTCCTTTATCCATTTCAAATTTGTAGATATTACTGTTCTCAGCTTGCTTTTCTTTTAGGGATGTACTCAAGGGCTTCAACATTTTTTCATAGTAATTCCTGTTTTTATGAATAGAAGGTTTCACATGTGCAGACATTTCTTTTTGGAGCTTTTCAATCTTCTCTAATCTTGAGTCTTTGACTTACTGGTTGAGACTGCTGTGGACATAAACATCCTCTTATTATTAGCTATAGAATGATGTCATCCAGCGGAACAGTGTAATGCATTTCTATAATGTCTCTTGGCAATCAGCATTAACTCTTAACGAGTCATCATCTTCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGTATTTTCCTTTGTATTTGCTAACAATTTTCCAACTAGATATACCATTAAGCCTTCTCTATTTTTGCATTGTTTAATACTAATTATGTAAAAACCAGTAGAAAAGATTTTTTTTCTGCATTATATTTTGCATGTACATCTTAAGATGCGGGTCTACAGTTCCTTGTCTAGTCTGCTGAATTTATTGCGACAGAAGCACTCTGCAATTACGCCTTGCAGAACATTGCTGTAAAACTCTTGTGGTTCCGTACCCATGCATGGGCACACTTCCATTATTTAAAACATCTGCCTTGTTGAGAGTAGAGTAGGTGGTGAATGTTTATATTTTTTCACTTCTCCACAAGTTTTGTTAATGTGTCCATGTTGGACACGTATTGGGTACTTCTTAGCATAATAGTTGATCACTTGTCAAGCATACTAAATAGCCACATAGTAATATATGAGTATAGGACGAAAACAATAAATGTTGGGCACGAAACGAATCAAACTCGTATTATAAGAATATACCTTCATAAATTTATTGACTTTGAATTTCAATCTTGTATAAATTTTTTTGGGTAAACATCAATATATACCCCTAAATTTTTGGGGTTGTATCAATTGAAACTTCAGACTAATAATTGTATTAATTTAAACCCTAAACTTTTATAAGTGAATCAATTTAAACCTTCCATTTGCATATTCAGAACCGTGAATGCATAACTTTCATATTTTGTATAAAACTTCTTTAAAAACAAGAATTGATGTAAATTAGAGAAAAATACGAGAATCAAATAGATAGTAGTGAGTTTTCATTAAATTTGAGCGGTTTTTAATCGGCACCTTCCTCCATTTTTTTTTTACTTATTTAGAAAGAATTTTTTTTGATGATTTTTCTTGCTACTTTAGTGGGATTTTTGAAGAATAGTAACATTTATCTAGGTGATTTTGAGTTGATTTTAAATTGAAAAGTGAAATAGCTGCAAATTACAAACAAATACTCTAAATTGATTCACTCATGAAAAATTTAGGCTTAAATTGATACAATTATTAGTTTGGAGAATTTATTGATACACACTCAAATTTTAGGGTATAAATCAATATTTGCCCAAAACATTTTAATACTCGTGTCTTGCTGAGTCTGTGTCTTGGATTTGTAAAATATGATGTTCCATATGACATTTCTTCTGAGAATATGATTTCTAGATTTATTGCAAATTCCTAATGTTTAAGGCTTTAAGCTCAATGTGTCAAAATGTGTTCGACACAAAATGGAAAATTATACATTATTAGAATTTGAACGTGGATGATATGGGCAGTGCCACATATTTTCATTGGGGAGGTGTAAATTTTTACATTCTAACTTTAATACCCATTATCTTTCACTTTTGAAAATTTGGGGGCAAAGCAGGAAAAAAATTTTAGAATCTGAAACTTTTTATATAATCTTTTTTAATCTAGATTACCCCTCTTGTTTTGATCCACCTTTGGGGTCGGTGATATATTTGCATACTTTACATTGCAGGAGTTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGTATGGTTTCATTTATTGGCGTTATGGGAAAGGGGTTGTGTTTGAAAACAGATTGAGATATATGTCCTGATATAGATTGCTATGAGTTTCTACTTCAAGACTTTTTAGATCTATGCTTAAACAGCCACTGATCATAAGCTCTTGGATGATATCTTGCATCTGCTTGTTTACAGGTGGCAGTAAGGAATATAAGAAGAGATGCTTTGAAAGCGTATGAAAAATTGGAAAAGGTTGGCAACGCATACATCGTCATATCTTAATCTTATAGTTCTTCTGCTTCTAAGTTTTATTGATCTGCCTTCCCAAGAGCAAGCTTGTTAATCTTTTGTATAGTTTTGCTCCTACTCTGGTTTCCGTAAATGTTTTTATCTTTTGTGTCAGGAGAAAAAACTTTCGGAAGATAATGTCAAGGACTTGTCAAGCGATTTGCAGGTTTGTTGTTGCTGCTGTTAAGTCAGTTATTTAGAGCTTTTGGTCCTGTCAGTTATTTCCAATTAAAATTCGAGTAATTTAACAGAACGGGAGAGGAATGGAGAATGTAAGCTGAAGGCATCAAACCTTGGAAAAGTTATACTAAATTCAAAAGCACAAGTTGTGAAACCTTTTGTATTCATTGCATACAATGGATTTTAAGTCATCCAGCATATTACCAAGCTTATATTCCAAGATTGTCAAGAATTTTCTTGTAGTTGTTCAATGTTGAATTTATATATTAGGGGTTTGATTTCTCATTTGCCCCTTATTTTGAGCATCCCAAGTTAAGATGATTTCCTTGTGCAGAAACTGACTGATGACTATATGAAGAAGATTGATGCCATACACAAGCAGAAAGAGAAGGTATGGTCCATCTCGACTGATTTAATTAAAGCACTCAAGACTTTAATCCATTCCACTGATTTAATTATGAATCCGGACACACAAGTATCGGTAGGATTTGATTTTGGATCTTCATTTCACGAATATTTGCAAGATCACTCACTGAACCTATTTTATTAG

mRNA sequence

ATGAAGGTAAGAGTTGAAGCAATTGCAAGGGTTAACAAGAAAGCAAGGATGGAAAAGACTATCGATACTGTTCGGTCTAGTTTCAATTCAATTAGGACTGGGAGATCAAACCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTTTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGAGTTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGAGAAAAAACTTTCGGAAGATAATGTCAAGGACTTGTCAAGCGATTTGCAGAAACTGACTGATGACTATATGAAGAAGATTGATGCCATACACAAGCAGAAAGAGAAGGTATGGTCCATCTCGACTGATTTAATTAAAGCACTCAAGACTTTAATCCATTCCACTGATTTAATTATGAATCCGGACACACAAGTATCGGTAGGATTTGATTTTGGATCTTCATTTCACGAATATTTGCAAGATCACTCACTGAACCTATTTTATTAG

Coding sequence (CDS)

ATGAAGGTAAGAGTTGAAGCAATTGCAAGGGTTAACAAGAAAGCAAGGATGGAAAAGACTATCGATACTGTTCGGTCTAGTTTCAATTCAATTAGGACTGGGAGATCAAACCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTTTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGAGTTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGAGAAAAAACTTTCGGAAGATAATGTCAAGGACTTGTCAAGCGATTTGCAGAAACTGACTGATGACTATATGAAGAAGATTGATGCCATACACAAGCAGAAAGAGAAGGTATGGTCCATCTCGACTGATTTAATTAAAGCACTCAAGACTTTAATCCATTCCACTGATTTAATTATGAATCCGGACACACAAGTATCGGTAGGATTTGATTTTGGATCTTCATTTCACGAATATTTGCAAGATCACTCACTGAACCTATTTTATTAG

Protein sequence

MKVRVEAIARVNKKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDLIKALKTLIHSTDLIMNPDTQVSVGFDFGSSFHEYLQDHSLNLFY
Homology
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BLAST of HG10011953 vs. NCBI nr
Match: KAA0057317.1 (ribosome-recycling factor [Cucumis melo var. makuwa] >TYK13417.1 ribosome-recycling factor [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 4.6e-69
Identity = 153/179 (85.47%), Postives = 157/179 (87.71%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 103 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 162

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 163 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 222

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL 174
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEKV SIS +L
Sbjct: 223 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKVRSISIEL 281

[Close]
BLAST of HG10011953 vs. NCBI nr
Match: GAY40688.1 (hypothetical protein CUMW_053890 [Citrus unshiu])

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-67
Identity = 140/152 (92.11%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTID VR++FNS+RTGRSNPAMLDKIEVEYYGSPVSLKSIAQI+TPD+SSLL+QP
Sbjct: 74  KARMEKTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 133

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL 133
           YDKSSLKSIEKAIV+SDLG+TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL
Sbjct: 134 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL 193

Query: 134 SEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
           SEDNVKDLSSDLQKLTD+YMKKID+I+KQKEK
Sbjct: 194 SEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEK 225

[Close]
BLAST of HG10011953 vs. NCBI nr
Match: XP_038888224.1 (ribosome-recycling factor, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-67
Identity = 149/171 (87.13%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 105 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 164

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 165 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 224

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID I+KQKEK
Sbjct: 225 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK 275

[Close]
BLAST of HG10011953 vs. NCBI nr
Match: XP_038888223.1 (ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-67
Identity = 149/171 (87.13%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 106 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 165

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 166 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 225

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID I+KQKEK
Sbjct: 226 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK 276

[Close]
BLAST of HG10011953 vs. NCBI nr
Match: XP_008449433.1 (PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 5.7e-67
Identity = 148/171 (86.55%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 102 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 161

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 162 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 221

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Sbjct: 222 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK 272

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BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match: Q9M1X0 (Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RRF PE=2 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-61
Identity = 131/171 (76.61%), Postives = 146/171 (85.38%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           K++MEKTI+T+R+SFNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QP
Sbjct: 100 KSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQP 159

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEG     
Sbjct: 160 YDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALR 219

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKL D YMKKI+ ++KQKEK
Sbjct: 220 NIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEK 270

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BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match: P37706 (Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=RRF PE=2 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-59
Identity = 125/171 (73.10%), Postives = 143/171 (83.63%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           K RMEKTI+ V++SFNSIRT RSNP MLDKI+VEYYG+P SLKSIAQISTPD+SSLLV P
Sbjct: 52  KERMEKTIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNP 111

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEG     
Sbjct: 112 YDKSSLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALR 171

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQK+ D+Y+KK+D+I KQKEK
Sbjct: 172 NIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEK 222

[Close]
BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match: P82231 (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea OX=3562 GN=RRF PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 122/179 (68.16%), Postives = 148/179 (82.68%), Query Frame = 0 

Query: 6   EAIARVNKKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPD 65
           +++   N K RMEKTI+T+RS+FNS+RT R++P MLD+IEVEYYG+PVSLKSIAQISTPD
Sbjct: 88  KSLIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPD 147

Query: 66  ASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQA 125
           ASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+K A
Sbjct: 148 ASSLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLA 207

Query: 126 EEG-------------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
           EEG                   KEKKLSEDNVKDLS+DLQKLTD+YMKK+++I+KQKE+
Sbjct: 208 EEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQ 266

[Close]
BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match: A2YMU2 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26546 PE=1 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55
Identity = 116/171 (67.84%), Postives = 143/171 (83.63%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           + RMEK I+TV+++FN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI+TPDA+SLL+QP
Sbjct: 91  RERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQP 150

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEG     
Sbjct: 151 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAIR 210

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLS+DLQK+TD+YMKKI+AI KQKE+
Sbjct: 211 NIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQ 261

[Close]
BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match: A3BLC3 (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0570700 PE=2 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55
Identity = 116/171 (67.84%), Postives = 143/171 (83.63%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           + RMEK I+TV+++FN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI+TPDA+SLL+QP
Sbjct: 91  RERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQP 150

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEG     
Sbjct: 151 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAIR 210

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLS+DLQK+TD+YMKKI+AI KQKE+
Sbjct: 211 NIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQ 261

[Close]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match: A0A5A7URP7 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00360 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.2e-69
Identity = 153/179 (85.47%), Postives = 157/179 (87.71%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 103 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 162

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 163 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 222

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL 174
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEKV SIS +L
Sbjct: 223 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKVRSISIEL 281

[Close]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match: A0A2H5NKI1 (Ribosome-recycling factor, chloroplastic OS=Citrus unshiu OX=55188 GN=CUMW_053890 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 7.2e-68
Identity = 140/152 (92.11%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTID VR++FNS+RTGRSNPAMLDKIEVEYYGSPVSLKSIAQI+TPD+SSLL+QP
Sbjct: 74  KARMEKTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQP 133

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL 133
           YDKSSLKSIEKAIV+SDLG+TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL
Sbjct: 134 YDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKEKKL 193

Query: 134 SEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
           SEDNVKDLSSDLQKLTD+YMKKID+I+KQKEK
Sbjct: 194 SEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEK 225

[Close]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match: A0A1S3BMN4 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.7e-67
Identity = 148/171 (86.55%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 103 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 162

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 163 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 222

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Sbjct: 223 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK 273

[Close]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match: A0A1S3BMY6 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.7e-67
Identity = 148/171 (86.55%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 102 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 161

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 162 YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 221

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Sbjct: 222 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK 272

[Close]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match: A0A0A0KJG4 (Ribosome-recycling factor, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G410660 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.7e-67
Identity = 147/171 (85.96%), Postives = 151/171 (88.30%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           KARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP
Sbjct: 103 KARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 162

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLKSIEKAIVNSDLG+TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG     
Sbjct: 163 YDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVR 222

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Sbjct: 223 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEK 273

[Close]
BLAST of HG10011953 vs. TAIR 10
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor )

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-62
Identity = 131/171 (76.61%), Postives = 146/171 (85.38%), Query Frame = 0 

Query: 14  KARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQP 73
           K++MEKTI+T+R+SFNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QP
Sbjct: 100 KSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQP 159

Query: 74  YDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEG----- 133
           YDKSSLK+IEKAIVNSDLG+TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEG     
Sbjct: 160 YDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALR 219

Query: 134 --------------KEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                         KEKKLSEDNVKDLSSDLQKL D YMKKI+ ++KQKEK
Sbjct: 220 NIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEK 270

[Close]
BLAST of HG10011953 vs. TAIR 10
Match: AT3G01800.1 (Ribosome recycling factor )

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18
Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 0 

Query: 15  ARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPY 74
           ++ME  ID +      +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PY
Sbjct: 95  SQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPY 154

Query: 75  DKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKE---- 134
           D  ++K +EKAIV S LGL P  DG+ +  ++P LT E  + + K+V K +E  K+    
Sbjct: 155 DPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRR 214

Query: 135 -------------KKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK 166
                          L +D VK L  ++ +LT  ++K  + + K KEK
Sbjct: 215 ARQKALDTIKKAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEK 262

The following BLAST results are available for this feature:
BLAST of HG10011953 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057317.14.6e-6985.47ribosome-recycling factor [Cucumis melo var. makuwa] >TYK13417.1 ribosome-recycl... [more]
GAY40688.11.5e-6792.11hypothetical protein CUMW_053890 [Citrus unshiu][more]
XP_038888224.13.3e-6787.13ribosome-recycling factor, chloroplastic isoform X2 [Benincasa hispida][more]
XP_038888223.13.3e-6787.13ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida][more]
XP_008449433.15.7e-6786.55PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo][more]
BLAST of HG10011953 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1X02.2e-6176.61Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RRF ... [more]
P377061.6e-5973.10Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota OX=4039 GN=... [more]
P822311.3e-5868.16Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea OX=3562 GN=RRF PE=... [more]
A2YMU21.8e-5567.84Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica OX=39946 ... [more]
A3BLC31.8e-5567.84Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica OX=3994... [more]
BLAST of HG10011953 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7URP72.2e-6985.47Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A2H5NKI17.2e-6892.11Ribosome-recycling factor, chloroplastic OS=Citrus unshiu OX=55188 GN=CUMW_05389... [more]
A0A1S3BMN42.7e-6786.55Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322... [more]
A0A1S3BMY62.7e-6786.55Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491322... [more]
A0A0A0KJG44.7e-6785.96Ribosome-recycling factor, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G410... [more]
BLAST of HG10011953 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63190.11.5e-6276.61ribosome recycling factor, chloroplast precursor [more]
AT3G01800.11.4e-1835.12Ribosome recycling factor [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableGENE3D3.30.1360.40coord: 35..109
e-value: 8.7E-47
score: 160.8
NoneNo IPR availablePANTHERPTHR20982:SF3MITOCHONDRIAL RIBOSOME RECYCLING FACTORcoord: 11..130
NoneNo IPR availablePANTHERPTHR20982:SF3MITOCHONDRIAL RIBOSOME RECYCLING FACTORcoord: 129..167
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 26..130
e-value: 1.9E-39
score: 135.2
IPR036191RRF superfamilyGENE3D1.10.132.20coord: 130..169
e-value: 2.8E-10
score: 42.2
IPR036191RRF superfamilyGENE3D1.10.132.20coord: 16..129
e-value: 8.7E-47
score: 160.8
IPR036191RRF superfamilySUPERFAMILY55194Ribosome recycling factor, RRFcoord: 12..165
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 129..167
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 11..130
IPR002661Ribosome recycling factorCDDcd00520RRFcoord: 14..165
e-value: 1.21652E-62
score: 190.934

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011953.1HG10011953.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0050832 defense response to fungus
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0032544 plastid translation
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0043023 ribosomal large subunit binding