HG10011922 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011922
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein PALE CRESS
Location	Chr01: 15450814 .. 15457338 (-)
RNA-Seq Expression	HG10011922
Synteny	HG10011922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGTATGTTTTTCTTCAAATTCCTTTTAATTTTAATTTACTTGCTTATTTTGGAGGGAGCCTAGTTCTATGTGCTTACTTATAACTGGCTCTTTCTTCAGGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGGTATGAGCATTTTTTGAACTGTTTTAAACATGCCATGTTTGTTACGATCTTAAAGAACACTCACTCAAGTCCTCCTTAGTCACACTCAGTACATGGAAGTTATGCAATTATAGGTGAAGGAAAATATTCAAAACTTATCCCAAGGATCAATCTTAAATTTATGGTTAAATAATTAAAAATACTCTTGCACTTTTAAAAATACCTTTGAACTTTAAAAAGTCTAAAAAATACCCTGAACTTTCAAAAAGGTTCAAAATGCCTCCACTATTAGTAGACCACACACAAAATTGACGTGGACTGATGAATGTCAACACCAGTGTATTACATGGAAGAAAATGAATACTAGATGGTTTGAGCCTTTGAGGTGTAAAAAATTATGGAAATCTGTGTTTATCAATTTACAGTGTGCTCTCCTCATTTTGTTCTTTCTACAGCACACACAGTCACACATTCAAATCTTCCATTAAGGACCATATCCATTAATTTCAAAAGATAAAGGCCCCTTTTTCCTTTCCGTATGCTTTTCTTTTAATTTTTCTTTCATAGCTTCAACAGTGACTGCTCTAATCTCCGTCAAAATCTAAACACATGCACTTTTCTGACATTTTGAACACCAAAGCCTTCATTTTGACCCTCTACTTTCCAAGGGATCGATTCAACAATAAACTTTTATCTACTCCTATGTGATTTCTTATACCCTCTATCTCTTCAAGATTAAAGATGAAAACTCCATAAAAGCTCACAAAGTTTCAAGATTCTAAGTTTCTTCAAAAATTAACTTACCAAAACAAAAATCTTCACCAAATCTGAATAAAGGCTATTGACCATGATTCATGCTCTCAACTCTTCTCCTTCAATAACCCTCCTTCCTTATTTTCCTTTCTTTCCCATGTTTTCTGTTTTTTTTTTCCCTTCTTCCTCTTGTTTTTTTATTTTTATTTTTTAATTTTTTTTAAAAGGAAACCAGCCTCTTCAATGAAATAATGAAATGAGACTATTGCTCAAAGTACAATAAAGATACACTATGAGTGAAAGTAACCTAAGGATCAGGAAATGCACCCGAGAATTTCAACTAGGTCGACACCCCCTTAGCATCCACATCATATCCATTAAAGATCTAACAAAAACGTTCCAAAAATCATAGAGAACAAAAAGCACAAACAGTCCAAACGGTGTCAATACATCACAATTCACAAATATAAACTTAAGCTGGAAAAATAAAAGTGTGCCAATTTAAACATAAGTCTTCTTTTTCCATTTTTTCTTTTCTTCAAAACTCCTTGGTGGGAGGCCATGAGTCAAAAGCACATCGTAAATCTACTTCGAGTCAGACTTGTTGAGAGCATAAGGATCTACAATTGAAAATTTGAAGTAGAAGAAGGAGAACTAGAGGAGCATGGAGAAAGGTGGAATTGAGAAGCATGGTGTTGAGGCACAATGACATGAGGCAATTTTGCCTCTTGTTTTAATTGGGTGATTATCTTCAAACGAGTGCTCGCCTGGCGGTGCCTCACGGTGACTTTGCCATTGATGAAAGCGTGCACCTAGCAAAGTATTCTGTCTCTTGTTTTGGAAAAAAAAATATGCATGATATCCAAGAAATTCAGTCGATGAAGCCCATGAAGAAAAAGCCCACATTAAGACTTTCCATGCAGAGAATATTTTATTCGAATTAAACATTCTAAAGTTGGCATCTTCAGCTACTTCAAATCATCTTCTTTGATTTCTTCAACTTCTTGAATGGGTTTGCTTCTTCACAAAGTACGACGTCCTCTTCAAGGCTTTTTTTTGCAAACGAATGACAGTCTTCCTCTTCTAGCTTCCTACTAATTCTTCTTCTTAAAAATATCTATTATATATATATATATATATATATATTCATGAGTATCCGGACCTGCTTACGCGCACCTTGATTGATCTCACGGGACAACCCATGAGGTTGATTTTAAGTTTTAAGTGTAAAAGCATTAAACTAAATTTTAATATTTTCTTGTCGGTTTGGTGGTCACTGATCACAATGATTTTGAGTTTTTTTTCCACTTTTTTGAAAGTTGAAACCGAGTGAGTTCTTTGGTAAGTTTTAAAATAATAAAGTTATATTATAGTATACACACTACTATGTTATATTATATCTTAAGATTTAGTGAGTTGATTTTTTTTTTTTTTTTAGTTTAGTTTATATTCTATCTTATTATTAATTTATAATGTTACGCGAATTGAAATTTATTATATTAATTTTTTTAAAGTTGTTTCTTTCGTGTAGGCTAGTAGCATCTGGGTGATTTTTAAAGTTTAGTTTCTATTCTTTTATGATAGGATGGATGTTGTGAGTTTGCAAGTTCTGTTTGGGAGTTATTTTTTTAGACGTTTGGTATTTCGTGTGCCCGTTAGAGAGACACTGGTGTTATGATCGAGGAGTTTCTCCTCAATCCACCTCGTGGGAGAAGGGTCACTTTTTATAGCTTGTTGGATTGTGTGCTATCTTACGGACTTTGTGGGGTGAGCGGAATAGTAGGATTTTTAGAGGGGTGGATAGGGACCCTAGTGAGATTTGGTCTCTTGTTCATTGTCGTGTTTCTTTGTGGGCTTCGATTTCAAAGACCTTTTGTAAGCTATAGACGTTATTTAAGCTGAGGTCCTTTCTTATAAAGGGGGGTTTCTTTTTTGTGGGCTTAGTTTTTTGTACGTCCGTGTATTCTTTCATTTTTTTCTCAATGAAAATTGTTTCTATATTAAACAAAAAAAGGATGGGAGAAAGGGAACAAAACCTGCAAATATCCCGGTTGGCAATATGTCATATTAGAAAATAAAAAGGATACAAACACTTGCAAATGTATGTTTTGCGGAAAAATTACCAAGGGTGACATTTGTCGAGCAACAAAACACTTAGTGGAAATTGAAATTTAAGCATGCTTAAAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATGTCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAACATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAAGTAGTTCCAGTTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCCAAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCATGCGTTGGATTTATCAAGTAGGTATTCCATTAAATACAAATTCGATTAAAATGTTTTCATGTAATGCTGGAAGTTGTGAGACAATTTGGACATGGTCTAATACCTCCTTATCATGAGGCTAGAGTAACAATCTAATGAGTAGCCATGAGGTTGACCGGAAAAGAAATAGTTGTTCTTTGATGTCTAATGGGTGGACCGATAGAAGAGATAGGACCCTGATAAATTTTTTAGTGCATGTTGCTGTTGGAACATTGTTTTTGGAGTCGATTGATGCACCTTCAGGCATCAAGATTGGAGACAAGGTATTGAACTCTTGGATAGAGTGGTTGAAAACACTACTTTTTTTAAGAGAGAGAGAATGGTTGAAAACACTACTCTAAACTTAAATCGCTATATGGGTATGTTAGGTATCTACCCCCTGCACTCAGTAAATCCCAACAAGATGTTTATAGACAAAAGATAGAAGGCACAATTCTCTGCTGAGATATATGTATATATAAGATTCAAGAAGTCTCAATATAGTAAGCAATGTTCCCAGACAATTTGGAAATAAGCAAGAAGTAAGAACACTCAGAATATAGAAATAGAACTAAGGACCAGCACATTAGAGAGAGCTGGTGATCCTCTCCTTTCTCTCCCAAAATTAGGGCCTGCACAAGAATACTCTGCATACCCTCCCTTTCCTCTGCCATTCTTTATTTATCAACATTCCAAGAGGAGGTCCCCCCCTCTCCACACACTTCCAACTGTATTTCCCCCACTACCAACTAATTCCACCTCACTTCTCATTTCCCATTTTGCCCTTCCTCTTATAAGTATAAACGATTGGGGGCCTAACAGGGCACCTCTAACTGCATCTTGCTTGAAATGGCCATTTCTCTAGATGTCTCTATCACCTCTTTCATACTTTATAGAAAACAGAGAGCCTAACTCTAGGATTGAAGAACTCGTTGGACCTTTGTTCCTAGGCTCTTTTTGTAATTTGCTAGGTCTTATTTCTTTTGATTGGAGCCCTTTTCTTGTAGTTCAACTACTTTTATGAGTTTTCCTTTTTGTATACTATGTATTCTTTCGTTTTTTTCACAAAGAAAGTAAAAATTTTCATCCAAAAAAAGAAGGAAAAGACTTTGGATTAGAAGAAAAGCCCACCTTATTCCATCTAATTTCTTCAAAACAGGTCATTCTCCATGCACACCAAATAGGCAACTGCATTCCTTTAAATCAATGATCGATCTTTGGCCCAAAACTTATATTTCTCTCGTTTCCTCTAGACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAACAAACTCCATTGATGCCACCAATCTGGTGCCAATTGTTTCCCAAGCTTGACCCTTTCAGCCATCGCTATAATGGTAAGATTAATCTTTGGTCCCACCCTCCTGGGTTTAGGCAAAGGGTCGTACAATAGTAACCAAAACCTCTTCCATCCGTCCACGTTCTGTGCCTGAAGGCACCAATAGGTTTGTTGTGTTCAGTTGCTGCCCAGTCTCTCTGTTTAAGTTTTGATATAATTAAATTTACCGTAATCCATAAGCTCAAGCTTTTGAATTTAGTGGTGATTGAACACAACATTTCAAGCCCACAAATGAGGAAGAGTGTTAAAGTATTAATGTAATTAAATTTCCTGCATCCATAAGCTTAAGTATTTGGGTTCAGTGATGATTTAACTCATAATTTCAGGTCCAGAAGTGTAAGAGTGTTAAAAATTGTTATAGTTCAATTTATCCTAATTTATAAGCTTAAGCTTTTGAGTTCAATGATGGTTTAATACTCTATTTTTGCAAAAGAAACTCATTCTAGACTTGAAGTATGTAGGGGTAGAAGAGCAAGAGCAGGCATTAAATGTCCCCTCTTCGCTATATATATACTGAAATTCAAGTAGTTCTCTTTTTAAACCAACAATAATCTAATTAATAATCTCCTCTAATTTCGTTAGTTCTCCATTTTTGTTTATTCGGTTGCTTTACAACAAATGAATAATTCCAAATTGCCTTTTTGCTCTTTTTATTAGTTGTCGTACCCTAAAAGAAACCTTAATGAAATGAGAGAATAACTTTTAAAATTTCATCATTCATAAAATGGAAATGTATGCCATAACTTCAACTTCACTTGTGTTGTTCAAAAATAAATATAAAAATAAAACTTTTAAAAGCATAATAAACCAGAAGAACCCGGTCAAGCTCAAATGGTTTTAGCATTGGACCATGGCACATACTGTTTAGTACTGAAAGTTCAATGTAACTCTTTCTAGTCATATCGTTTGCATTTGCACCAACTTTTTCCGTTCAATTTAACTTGGGATAACGCAAGAATCTGGATTCTCCTAATACAAGTACTGAGTTTCCTCAATATTTTAGACTGAAATTCTCAAACGAGAGGCTACTCCTGCCATGAGACTCCTCAACGAACTTCTGAATATGTATGACGGCTTTGATGATGAAGGATGGCTAAAGGACTGCAGAAAACGCATGGTCGACACCTTTCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTAGACATCGATAAGGTATAATTGTTGAAATACGATAGCTCAATTGGTTTGTAATGGAGATGTGGATGATAAATTTAAAGGAATGTCTAAACTAAGTCTACAATGTGGCTAATTTGGCGTTTGTCTGATTTTCTTTTCATGATTAGCATCAAGGGCCGTTACGGCCATCTCTTGAAGTTGAAGCTGATAATACGTTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGATGTTGGAGCGAATCAGAGTGAACTACAAAATACAAATGCAGATGGTTTTGATGCGGAATCGGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGAACAATAAGATTGGTAGAAGCGCTGCTAGATTTGGCTATAAATCTGAAGTGGTAG

mRNA sequence

ATGCAGAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGACTGAAATTCTCAAACGAGAGGCTACTCCTGCCATGAGACTCCTCAACGAACTTCTGAATATGTATGACGGCTTTGATGATGAAGGATGGCTAAAGGACTGCAGAAAACGCATGGTCGACACCTTTCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTAGACATCGATAAGCATCAAGGGCCGTTACGGCCATCTCTTGAAGTTGAAGCTGATAATACGTTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGATGTTGGAGCGAATCAGAGTGAACTACAAAATACAAATGCAGATGGTTTTGATGCGGAATCGGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGAACAATAAGATTGGTAGAAGCGCTGCTAGATTTGGCTATAAATCTGAAGTGGTAG

Coding sequence (CDS)

ATGCAGAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGACTGAAATTCTCAAACGAGAGGCTACTCCTGCCATGAGACTCCTCAACGAACTTCTGAATATGTATGACGGCTTTGATGATGAAGGATGGCTAAAGGACTGCAGAAAACGCATGGTCGACACCTTTCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTAGACATCGATAAGCATCAAGGGCCGTTACGGCCATCTCTTGAAGTTGAAGCTGATAATACGTTGTTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTACAAGATGTTGGAGCGAATCAGAGTGAACTACAAAATACAAATGCAGATGGTTTTGATGCGGAATCGGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGAACAATAAGATTGGTAGAAGCGCTGCTAGATTTGGCTATAAATCTGAAGTGGTAG

Protein sequence

MQKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEADNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALLDLAINLKW

Homology

[Close]

BLAST of HG10011922 vs. NCBI nr
Match: XP_038888470.1 (protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDAIRSLDLLYRRVETEILKREATPAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARHDDEKDAIRSLDLLYRRVETEILKREATPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFDDEGWLK+CRKRMVDTFPREDPFSILVPAG DIDKHQGPLRPSLEVEA
Sbjct: 187 LLNELLNMYDGFDDEGWLKNCRKRMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLEVEA 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA+QSE+QN NADGFDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 247 DNTLLRVDFVREVDELLQEVGADQSEVQNGNADGFDAESVASRLKQQEKQRTIRLVEALL 306

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 307 DLAMNLKW 314

[Close]

BLAST of HG10011922 vs. NCBI nr
Match: XP_038888471.1 (protein PALE CRESS, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94
Identity = 179/188 (95.21%), Postives = 185/188 (98.40%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDAIRSLDLLYRRVETEILKREATPAMR
Sbjct: 69  EKIEEAAEKGELTELVLLVIWNRLDLARHDDEKDAIRSLDLLYRRVETEILKREATPAMR 128

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFDDEGWLK+CRKRMVDTFPREDPFSILVPAG DIDKHQGPLRPSLEVEA
Sbjct: 129 LLNELLNMYDGFDDEGWLKNCRKRMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLEVEA 188

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA+QSE+QN NADGFDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 189 DNTLLRVDFVREVDELLQEVGADQSEVQNGNADGFDAESVASRLKQQEKQRTIRLVEALL 248

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 249 DLAMNLKW 256

[Close]

BLAST of HG10011922 vs. NCBI nr
Match: XP_008449384.1 (PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein PALE CRESS [Cucumis melo var. makuwa])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 173/188 (92.02%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VEA
Sbjct: 187 LLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEA 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 247 DNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALL 306

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 307 DLAMNLKW 314

[Close]

BLAST of HG10011922 vs. NCBI nr
Match: KAG7036373.1 (Protein PALE CRESS, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 170/187 (90.91%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 3   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRL 62
           KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+PAMRL
Sbjct: 133 KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASPAMRL 192

Query: 63  LNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAD 122
           LN+LLNMYD F+DEGWLKDCRKRM+DTFPREDPFSILVPAG DIDKHQG LRPSLEVEAD
Sbjct: 193 LNDLLNMYDNFNDEGWLKDCRKRMIDTFPREDPFSILVPAGFDIDKHQGQLRPSLEVEAD 252

Query: 123 NTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALLD 182
           NTLLRVDFVREVDELLQ+V A+QSE+QN NADGFDAESVASRLKQQEKQRT+RLVE LL+
Sbjct: 253 NTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVRLVETLLE 312

Query: 183 LAINLKW 190
           LA+NL+W
Sbjct: 313 LAMNLEW 319

[Close]

BLAST of HG10011922 vs. NCBI nr
Match: KAA0057380.1 (protein PALE CRESS [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-89
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 3   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRL 62
           KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRL
Sbjct: 18  KIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRL 77

Query: 63  LNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAD 122
           LNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VEAD
Sbjct: 78  LNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEAD 137

Query: 123 NTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALLD 182
           NTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALLD
Sbjct: 138 NTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLD 197

Query: 183 LAINLKW 190
           LA+NLKW
Sbjct: 198 LAMNLKW 204

[Close]

BLAST of HG10011922 vs. ExPASy Swiss-Prot
Match: Q39089 (Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.5e-77
Identity = 138/188 (73.40%), Postives = 162/188 (86.17%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           ++IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+
Sbjct: 126 ERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMK 185

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLN+LLNM+DGF+D+ WLKDCRKRM +TFPREDPFSIL+P G DID HQG LRP +E E 
Sbjct: 186 LLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETET 245

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVD LLQ+V   +     +  +G D E++A + KQQEKQRTIR +EA+L
Sbjct: 246 DNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAIL 305

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 306 DLALNLKW 313

[Close]

BLAST of HG10011922 vs. ExPASy TrEMBL
Match: A0A5D3E2R9 (Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00420 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90
Identity = 173/188 (92.02%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VEA
Sbjct: 187 LLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEA 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 247 DNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALL 306

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 307 DLAMNLKW 314

[Close]

BLAST of HG10011922 vs. ExPASy TrEMBL
Match: A0A1S3BMU2 (protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90
Identity = 173/188 (92.02%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VEA
Sbjct: 187 LLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEA 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 247 DNTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALL 306

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 307 DLAMNLKW 314

[Close]

BLAST of HG10011922 vs. ExPASy TrEMBL
Match: A0A5A7UQJ1 (Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G002460 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.0e-89
Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 3   KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRL 62
           KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRL
Sbjct: 18  KIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMRL 77

Query: 63  LNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEAD 122
           LNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VEAD
Sbjct: 78  LNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLTVEAD 137

Query: 123 NTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALLD 182
           NTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALLD
Sbjct: 138 NTLLRVDFVREVDELLQEVGAVQSDVQNENADSFDAESVASRLKQQEKQRTIRLVEALLD 197

Query: 183 LAINLKW 190
           LA+NLKW
Sbjct: 198 LAMNLKW 204

[Close]

BLAST of HG10011922 vs. ExPASy TrEMBL
Match: A0A0A0KJC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 172/188 (91.49%), Postives = 180/188 (95.74%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARCDDEKDAVRSLDLLYRRVETEILKREATPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLNELLNMYDGFD+EGWLK CRK MVDTFPREDPFSILVPAG DIDKHQGPLRPSL VE+
Sbjct: 187 LLNELLNMYDGFDNEGWLKACRKCMVDTFPREDPFSILVPAGFDIDKHQGPLRPSLAVES 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+VGA QS++QN NAD FDAESVASRLKQQEKQRTIRLVEALL
Sbjct: 247 DNTLLRVDFVREVDELLQEVGAVQSDVQNGNADSFDAESVASRLKQQEKQRTIRLVEALL 306

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 307 DLAMNLKW 314

[Close]

BLAST of HG10011922 vs. ExPASy TrEMBL
Match: A0A6J1EYI4 (protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.9e-89
Identity = 169/188 (89.89%), Postives = 181/188 (96.28%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           +KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+PAMR
Sbjct: 127 EKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREASPAMR 186

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLN+LLNMYD F+DEGWLKDCRK M+DTFPREDPFSILVPAG DIDKHQG LRPSLEVEA
Sbjct: 187 LLNDLLNMYDNFNDEGWLKDCRKCMIDTFPREDPFSILVPAGFDIDKHQGQLRPSLEVEA 246

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVDELLQ+V A+QSE+QN NADGFDAESVASRLKQQEKQRT+RLVE LL
Sbjct: 247 DNTLLRVDFVREVDELLQEVRADQSEVQNANADGFDAESVASRLKQQEKQRTVRLVETLL 306

Query: 182 DLAINLKW 190
           +LA+NL+W
Sbjct: 307 ELAMNLEW 314

[Close]

BLAST of HG10011922 vs. TAIR 10
Match: AT2G48120.1 (pale cress protein (PAC) )

HSP 1 Score: 288.5 bits (737), Expect = 3.9e-78
Identity = 138/188 (73.40%), Postives = 162/188 (86.17%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           ++IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+
Sbjct: 126 ERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMK 185

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLN+LLNM+DGF+D+ WLKDCRKRM +TFPREDPFSIL+P G DID HQG LRP +E E 
Sbjct: 186 LLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETET 245

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVD LLQ+V   +     +  +G D E++A + KQQEKQRTIR +EA+L
Sbjct: 246 DNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAIL 305

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 306 DLALNLKW 313

[Close]

BLAST of HG10011922 vs. TAIR 10
Match: AT2G48120.2 (pale cress protein (PAC) )

HSP 1 Score: 288.5 bits (737), Expect = 3.9e-78
Identity = 138/188 (73.40%), Postives = 162/188 (86.17%), Query Frame = 0


Query: 2   QKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMR 61
           ++IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+
Sbjct: 120 ERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMK 179

Query: 62  LLNELLNMYDGFDDEGWLKDCRKRMVDTFPREDPFSILVPAGLDIDKHQGPLRPSLEVEA 121
           LLN+LLNM+DGF+D+ WLKDCRKRM +TFPREDPFSIL+P G DID HQG LRP +E E 
Sbjct: 180 LLNDLLNMHDGFEDDAWLKDCRKRMAETFPREDPFSILMPPGFDIDMHQGQLRPPIETET 239

Query: 122 DNTLLRVDFVREVDELLQDVGANQSELQNTNADGFDAESVASRLKQQEKQRTIRLVEALL 181
           DNTLLRVDFVREVD LLQ+V   +     +  +G D E++A + KQQEKQRTIR +EA+L
Sbjct: 240 DNTLLRVDFVREVDALLQEVRIEEDATTGSKGEGLDPEAIALKFKQQEKQRTIRQIEAIL 299

Query: 182 DLAINLKW 190
           DLA+NLKW
Sbjct: 300 DLALNLKW 307

The following BLAST results are available for this feature:

BLAST of HG10011922 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888470.1	4.7e-94	95.21	protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_038888471.1	4.7e-94	95.21	protein PALE CRESS, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_008449384.1	1.2e-89	92.02	PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo] >TYK30069.1 protein ...	[more]
KAG7036373.1	1.2e-89	90.91	Protein PALE CRESS, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0057380.1	2.1e-89	92.51	protein PALE CRESS [Cucumis melo var. makuwa]	[more]

BLAST of HG10011922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39089	5.5e-77	73.40	Protein PALE CRESS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAC PE=2 SV...	[more]

BLAST of HG10011922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2R9	5.9e-90	92.02	Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G0...	[more]
A0A1S3BMU2	5.9e-90	92.02	protein PALE CRESS, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491280 PE=4 S...	[more]
A0A5A7UQJ1	1.0e-89	92.51	Protein PALE CRESS OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G0...	[more]
A0A0A0KJC6	1.7e-89	91.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G408790 PE=4 SV=1	[more]
A0A6J1EYI4	2.9e-89	89.89	protein PALE CRESS, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437380 ...	[more]

BLAST of HG10011922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G48120.1	3.9e-78	73.40	pale cress protein (PAC)	[more]
AT2G48120.2	3.9e-78	73.40	pale cress protein (PAC)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034563	Protein PALE CRESS	PANTHER	PTHR37219	PROTEIN PALE CRESS, CHLOROPLASTIC	coord: 2..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011922.1	HG10011922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0010239	chloroplast mRNA processing
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0048366	leaf development
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009509	chromoplast
cellular_component	GO:0009513	etioplast
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0009537	proplastid
cellular_component	GO:0009536	plastid
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0019843	rRNA binding