HG10011820 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011820
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pectin lyase-like superfamily protein
Location	Chr01: 12917319 .. 12918947 (+)
RNA-Seq Expression	HG10011820
Synteny	HG10011820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATTGCAAATTTTGAAAATTGGATCACTTTTCGACATGTCGATGGTGTTAGTGTCTTTGGCGGTGTTCTTGATGCTCAAGGATTTGGATTGTGGGCTTGCAAAAATTCCAAAAATTCTTGCCCCTCGGGAGCCACGGTAAATCATTTTTAATAATAAAAAAATTTGTTAAATTTTATTTTTAAAAAATCTTTTTTTTAAAATTGCCATGTGACAAATGTTGATAAGTGTTGTCTCAGCTACACAATAGTTTTTTTTGCTTTTCAATTTTAATCTTTATACTTTTAAATATCTAATTTTAGTCTTATATTTTCAATAAATCAAAAACTCAGTCCCCAATGTTAGTTTATTGTTGTTTTTTTAAAACTTTTTTTTATTATTAGCATTATTACAATAATTTTAAAAACATATTCACATATTATATTTTTTTGCATGAAAATTATTATTATTATTTAACTAATTTGGTAAAAATTAATTTTCAGGGACTAAATTTAAGATTTATTTAAAGTATAGACTAAAATCAGAAAATAAAATATACATACTAAAATTGAACAAATTGAAAAATATAAGACCAAATCAGTATTTTAACCAAATTTTTTTCTTTTTACAAAAGTTACCATTTTTATTTATTTCCTTCTGCGGAGATTTGCTTTCTAATTACAAAACATTATTGAATGTTTTTTTTTGGTGCAGTCGTTGGAATTTTCCAATTCAAAAAACATTATAGTTAGTGGATTGACGTCGCTGAATAGTCAAATGTTCCACATAGTAATCAATGATTGTCAAAATGTAAAAATGCAAGGACTGAAGGTCTCGGCTGCCGGCAACAGCCCGAACACTGACGGCATTCACGTAGCACAATCTTTAGGGGTTACTATCCTCAACTCCATCATTGGCATTGATGATGACTGCATTTCAATAGGTCCTGGCACGTCGAACTTGTGGATTGAGAAGGTTACTTGTGGACCTGGCCATGGAATCAGGTACTAAATTTTCAAAATTTAATGAAGTTTATGTGTTAATTGAGATAATTAAACATATGATTTTTATTTGATGGGTTGGTGCAGCATTGGGAGTTTAGGAAGAGAAATACAAGAAAATGGTGTTCAGAATGTAACAGTGAAATCTGCCACATTCACCAACACTCAAAATGGGGTCAGAATTAAAACATGGGGAAGGCCAAGCAAAGGATTTGCAAAAAACATTCTTTTTAAAGATATTGTAATGGTCAATGTCGAAAATCCTATCATCATCGATCAAAATTATTGCCCCGAAAACAAAGGTTGTCCTGGACAGGTCTGTATTGACATTTTTTTTTGTTATCCAACTTCAGCTTGCCACGTGCCAAACTATTATTTTTTTCTTTTAAATATTTTGTATCTTATTTATTTATTTATTTTTTACAAATAGGATTCTGGAGTTAAAATTAGCGATGTGAAATATCGAAGCATCCACGGAACATCAGCAACACAAGTTGCGATGAAATTCGATTGTAGCTCGAAATTTCCATGCAGTGACATAACGCTGGAGGATGTGAAGCTGAGTTATAAAAATGAAGCAGCTAAAGCTTCATGTAGTCATGCTGAAGGAAGCGTTGCTAGTTTAGTTCAACCATCAAGTTGTTTGTAG

mRNA sequence

GTGATTGCAAATTTTGAAAATTGGATCACTTTTCGACATGTCGATGGTGTTAGTGTCTTTGGCGGTGTTCTTGATGCTCAAGGATTTGGATTGTGGGCTTGCAAAAATTCCAAAAATTCTTGCCCCTCGGGAGCCACGTCGTTGGAATTTTCCAATTCAAAAAACATTATAGTTAGTGGATTGACGTCGCTGAATAGTCAAATGTTCCACATAGTAATCAATGATTGTCAAAATGTAAAAATGCAAGGACTGAAGGTCTCGGCTGCCGGCAACAGCCCGAACACTGACGGCATTCACGTAGCACAATCTTTAGGGGTTACTATCCTCAACTCCATCATTGGCATTGATGATGACTGCATTTCAATAGGTCCTGGCACGTCGAACTTGTGGATTGAGAAGGTTACTTGTGGACCTGGCCATGGAATCAGCATTGGGAGTTTAGGAAGAGAAATACAAGAAAATGGTGTTCAGAATGTAACAGTGAAATCTGCCACATTCACCAACACTCAAAATGGGGTCAGAATTAAAACATGGGGAAGGCCAAGCAAAGGATTTGCAAAAAACATTCTTTTTAAAGATATTGTAATGGTCAATGTCGAAAATCCTATCATCATCGATCAAAATTATTGCCCCGAAAACAAAGGTTGTCCTGGACAGGATTCTGGAGTTAAAATTAGCGATGTGAAATATCGAAGCATCCACGGAACATCAGCAACACAAGTTGCGATGAAATTCGATTGTAGCTCGAAATTTCCATGCAGTGACATAACGCTGGAGGATGTGAAGCTGAGTTATAAAAATGAAGCAGCTAAAGCTTCATGTAGTCATGCTGAAGGAAGCGTTGCTAGTTTAGTTCAACCATCAAGTTGTTTGTAG

Coding sequence (CDS)

GTGATTGCAAATTTTGAAAATTGGATCACTTTTCGACATGTCGATGGTGTTAGTGTCTTTGGCGGTGTTCTTGATGCTCAAGGATTTGGATTGTGGGCTTGCAAAAATTCCAAAAATTCTTGCCCCTCGGGAGCCACGTCGTTGGAATTTTCCAATTCAAAAAACATTATAGTTAGTGGATTGACGTCGCTGAATAGTCAAATGTTCCACATAGTAATCAATGATTGTCAAAATGTAAAAATGCAAGGACTGAAGGTCTCGGCTGCCGGCAACAGCCCGAACACTGACGGCATTCACGTAGCACAATCTTTAGGGGTTACTATCCTCAACTCCATCATTGGCATTGATGATGACTGCATTTCAATAGGTCCTGGCACGTCGAACTTGTGGATTGAGAAGGTTACTTGTGGACCTGGCCATGGAATCAGCATTGGGAGTTTAGGAAGAGAAATACAAGAAAATGGTGTTCAGAATGTAACAGTGAAATCTGCCACATTCACCAACACTCAAAATGGGGTCAGAATTAAAACATGGGGAAGGCCAAGCAAAGGATTTGCAAAAAACATTCTTTTTAAAGATATTGTAATGGTCAATGTCGAAAATCCTATCATCATCGATCAAAATTATTGCCCCGAAAACAAAGGTTGTCCTGGACAGGATTCTGGAGTTAAAATTAGCGATGTGAAATATCGAAGCATCCACGGAACATCAGCAACACAAGTTGCGATGAAATTCGATTGTAGCTCGAAATTTCCATGCAGTGACATAACGCTGGAGGATGTGAAGCTGAGTTATAAAAATGAAGCAGCTAAAGCTTCATGTAGTCATGCTGAAGGAAGCGTTGCTAGTTTAGTTCAACCATCAAGTTGTTTGTAG

Protein sequence

VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGLTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL

Homology

[Close]

BLAST of HG10011820 vs. NCBI nr
Match: TYK27707.1 (polygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 528.9 bits (1361), Expect = 2.8e-146
Identity = 256/291 (87.97%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIAN  NWITF+ VDGV+VFGGVLDAQGFGLWACKNSK+SCPSGATSLEFSNSKNI+VSG
Sbjct: 96  VIANSGNWITFKRVDGVNVFGGVLDAQGFGLWACKNSKSSCPSGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLK+SAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKISAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPC+DITLEDV+LSYKNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCNDITLEDVELSYKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. NCBI nr
Match: KAA0056020.1 (polygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145
Identity = 255/291 (87.63%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIA+  NWITF+ VDGV+VFGGVLDAQGFGLWACKNSK+SCPSGATSLEFSNSKNI+VSG
Sbjct: 96  VIADSGNWITFKRVDGVNVFGGVLDAQGFGLWACKNSKSSCPSGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLK+SAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKISAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPC+DITLEDV+LSYKNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCNDITLEDVELSYKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. NCBI nr
Match: XP_004139060.1 (polygalacturonase [Cucumis sativus] >KGN66537.1 hypothetical protein Csa_007593 [Cucumis sativus])

HSP 1 Score: 523.5 bits (1347), Expect = 1.2e-144
Identity = 256/291 (87.97%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIAN  NWITFR VDGV++FGGVLDAQG GLWACKNSK+SCP GATSLEFSNSKNI+VSG
Sbjct: 96  VIANSGNWITFRRVDGVTLFGGVLDAQGSGLWACKNSKSSCPPGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLKVSAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKVSAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPCSDITLEDVKLS KNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCSDITLEDVKLSCKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. NCBI nr
Match: XP_038888709.1 (polygalacturonase-like [Benincasa hispida])

HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143
Identity = 253/291 (86.94%), Postives = 269/291 (92.44%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIAN  NWITFRHV GVSVFGG+LDAQGF LWACK+SKNSCPSGATSLEFSNSKNI+VSG
Sbjct: 100 VIANNGNWITFRHVYGVSVFGGILDAQGFELWACKHSKNSCPSGATSLEFSNSKNIMVSG 159

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVKMQGLK+SAA +SPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 160 LTSLNSQMFHIVINGCQNVKMQGLKISAASDSPNTDGIHVALSSVVTILNSIIGTGDDCI 219

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           S+GP TSNLWIE V CGPGHGISIGSLGRE+QE+GVQNVTVKSA+FTNTQNGVRIKTWG+
Sbjct: 220 SVGPSTSNLWIENVACGPGHGISIGSLGREMQEDGVQNVTVKSASFTNTQNGVRIKTWGK 279

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PSKGFA+NILF+DIVMVNVENPIIIDQNYCP NK CPGQDSGVKISDV YR+IHGTSAT+
Sbjct: 280 PSKGFARNILFQDIVMVNVENPIIIDQNYCPNNKNCPGQDSGVKISDVTYRNIHGTSATE 339

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPCSDI LEDVKLSYKN+AA+ASCSHAEG    LVQPSSCL
Sbjct: 340 VAMKFDCSSKFPCSDIMLEDVKLSYKNKAAEASCSHAEGGATGLVQPSSCL 390

[Close]

BLAST of HG10011820 vs. NCBI nr
Match: XP_023511455.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-134
Identity = 235/286 (82.17%), Postives = 260/286 (90.91%), Query Frame = 0


Query: 6   ENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGLTSLN 65
           ENWITFRHVDGVSVFGGVLD QG GLW CKNS  SCP GATSLEFSNSKNIIVSGLTSLN
Sbjct: 101 ENWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLN 160

Query: 66  SQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISIGPG 125
           SQMFHIV+N CQNVKMQG+K+SAAGNSPNTDGIHVA S  VTI+ S I   DDCISIGPG
Sbjct: 161 SQMFHIVVNGCQNVKMQGIKISAAGNSPNTDGIHVALSSQVTIITSSISTGDDCISIGPG 220

Query: 126 TSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPSKGF 185
           TSNLWIE V CGPGHGISIGSLG++++E+GVQNVTVK+ATFTNTQNGVRIKTWG+PSKGF
Sbjct: 221 TSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKTATFTNTQNGVRIKTWGKPSKGF 280

Query: 186 AKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVAMKF 245
           A+NILF+DI+M NV+NPIIIDQNYCP NKGCPGQ SGV+IS+V Y++IHGTSATQVAMKF
Sbjct: 281 ARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKF 340

Query: 246 DCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           DCSSKFPC  ITLE+VKLSYKN+ A+ASCS+A+G+ A LVQPSSCL
Sbjct: 341 DCSSKFPCRGITLENVKLSYKNDVAEASCSNADGTAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-121
Identity = 210/292 (71.92%), Postives = 245/292 (83.90%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSK-NSCPSGATSLEFSNSKNIIVS 60
           VI N  NWI F HV+GV++ GG+LD QG  LWACK     SCPSGAT+L FS+S NI+VS
Sbjct: 102 VIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVS 161

Query: 61  GLTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDC 120
           GL SLNSQMFHIVIND QNV+MQG++VS +GNSPNTDGIHV  S GVTILNS I   DDC
Sbjct: 162 GLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDC 221

Query: 121 ISIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWG 180
           +SIGPGTSNLWIE V CGPGHGISIGSLG+E +E GVQNVTVK+ TF+ TQNG+RIK+WG
Sbjct: 222 VSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWG 281

Query: 181 RPSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSAT 240
           RPS GFA+NILF+   MVNVENPI+IDQ+YCP+NKGCPGQ SGV+ISDV Y  IHGTSAT
Sbjct: 282 RPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSAT 341

Query: 241 QVAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           +VA+KFDCS K PC +I LEDVKL+YKN+AA++SCSHA+G+   +VQP+SCL
Sbjct: 342 EVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHADGTTEGVVQPTSCL 393

[Close]

BLAST of HG10011820 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 8.7e-90
Identity = 167/292 (57.19%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNS-KNSCPSGATSLEFSNSKNIIVS 60
           +IA+ ++WI F  V  VS++GG+LDAQG  LW CKN+  ++CP+GA SL FS S NI +S
Sbjct: 108 IIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKIS 167

Query: 61  GLTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDC 120
           GLTS+NSQ FHIVI++  NV + G+KVSA  NSPNTDGIHV  S  V I NS IG  DDC
Sbjct: 168 GLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDC 227

Query: 121 ISIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWG 180
           ISIGPG++N++I+ + CGPGHGISIGSLGR  +E GV NVTV +  F  T NGVRIKTWG
Sbjct: 228 ISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWG 287

Query: 181 RPSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSAT 240
           + S  FA+NI+F+ I M  V+NPIIIDQ+YC  +K CP Q+SGVK+S+V+Y  IHGTS T
Sbjct: 288 KDSNSFARNIVFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNT 347

Query: 241 QVAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           +VA+  DCS + PC+ I ++DV L   +  A+ASC +A GS   +V  + CL
Sbjct: 348 EVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

[Close]

BLAST of HG10011820 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-64
Identity = 128/288 (44.44%), Postives = 184/288 (63.89%), Query Frame = 0


Query: 6   ENWITFRHVDGVSVFG-GVLDAQGFGLWACKN-SKN-SCPSGATSLEFSNSKNIIVSGLT 65
           + W++F  +DG++V G G LD QG   WA  N  KN +C   A +L F   K+ +V  +T
Sbjct: 86  DGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDIT 145

Query: 66  SLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISI 125
           SLNS+MFHI + +C+++  Q + V+A G S NTDGIHV  S GVTI N+ I   DDCISI
Sbjct: 146 SLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISI 205

Query: 126 GPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPS 185
           GPG+ N+ I +V CGPGHGISIGSLGR   E  V+ +TVK  TF+ T NGVR+KTW    
Sbjct: 206 GPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSP 265

Query: 186 KGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVA 245
            G A ++ F+D+ M NV+NP+I+DQ YCP  +      S +K+S++ + +I GTS  +VA
Sbjct: 266 PGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVA 325

Query: 246 MKFDCSSKFPCSDITLEDVKLSYKNEA--AKASCSHAEGSVASLVQPS 289
           +   CS   PCS++ + ++ LSY+     A ++CS+ + + +    P+
Sbjct: 326 VVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGKQVPA 373

[Close]

BLAST of HG10011820 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-61
Identity = 128/287 (44.60%), Postives = 178/287 (62.02%), Query Frame = 0


Query: 7   NWITFRHVDGVSV-FGGVLDAQGFGLW--ACK-NSKNSCPSGATSLEFSNSKNIIVSGLT 66
           +WI F +V+ + V  GG +D  G   W  +CK N +  C    T++ F    N+ VS + 
Sbjct: 151 HWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIR 210

Query: 67  SLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISI 126
             N+Q  H+   DC+NVK   L V++  +SPNTDGIHV+ +  + I +SI+   DDCISI
Sbjct: 211 LENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISI 270

Query: 127 GPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPS 186
             G+ N+    +TCGPGHGISIGSLG +  E  V NV V  AT   T NGVRIKTW +  
Sbjct: 271 VSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTW-QGG 330

Query: 187 KGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVA 246
            G AKNI+F+DI+M NV NPIII+Q+YC   + CP Q S V++S+V Y++I GTS+  +A
Sbjct: 331 HGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIA 390

Query: 247 MKFDCSSKFPCSDITLEDVKL--SYKNEAAKASCSHAEGSVASLVQP 288
           +KF CS   PC  I++++VKL    + + +KASCS+ +      V P
Sbjct: 391 VKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKLDTRGNVSP 436

[Close]

BLAST of HG10011820 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.2e-61
Identity = 131/286 (45.80%), Postives = 174/286 (60.84%), Query Frame = 0


Query: 7   NWITFRHVDGVSV-FGGVLDAQGFGLW--ACKNSKN-SCPSGATSLEFSNSKNIIVSGLT 66
           +W+ F  V  + V  GG ++  G   W  +CK +K   C    T+L F  SK++IV  L 
Sbjct: 169 HWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLK 228

Query: 67  SLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISI 126
             N+Q  H+  ++C NV+   L V+A  NSPNTDGIHV  +  + I + +IG  DDCISI
Sbjct: 229 IENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISI 288

Query: 127 GPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPS 186
             G+  + +  +TCGPGHGISIGSLG    E  V +V V  A    T NGVRIKTW +  
Sbjct: 289 VNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTW-QGG 348

Query: 187 KGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVA 246
            G A NI F+++ M NVENPIIIDQNYC ++K C  Q S V++ +V Y++I GT A+ VA
Sbjct: 349 SGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVA 408

Query: 247 MKFDCSSKFPCSDITLEDVKLSYK-NEAAKASCSHAEGSVASLVQP 288
           + FDCS +FPC  I LEDV L  +   AAKA C++ E S   +V P
Sbjct: 409 ITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVELSETGVVSP 453

[Close]

BLAST of HG10011820 vs. ExPASy TrEMBL
Match: A0A5D3DV94 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00420 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146
Identity = 256/291 (87.97%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIAN  NWITF+ VDGV+VFGGVLDAQGFGLWACKNSK+SCPSGATSLEFSNSKNI+VSG
Sbjct: 96  VIANSGNWITFKRVDGVNVFGGVLDAQGFGLWACKNSKSSCPSGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLK+SAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKISAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPC+DITLEDV+LSYKNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCNDITLEDVELSYKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. ExPASy TrEMBL
Match: A0A5A7ULI9 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001680 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.2e-146
Identity = 255/291 (87.63%), Postives = 275/291 (94.50%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIA+  NWITF+ VDGV+VFGGVLDAQGFGLWACKNSK+SCPSGATSLEFSNSKNI+VSG
Sbjct: 96  VIADSGNWITFKRVDGVNVFGGVLDAQGFGLWACKNSKSSCPSGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLK+SAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKISAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPC+DITLEDV+LSYKNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCNDITLEDVELSYKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. ExPASy TrEMBL
Match: A0A0A0M095 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627460 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 5.8e-145
Identity = 256/291 (87.97%), Postives = 272/291 (93.47%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VIAN  NWITFR VDGV++FGGVLDAQG GLWACKNSK+SCP GATSLEFSNSKNI+VSG
Sbjct: 96  VIANSGNWITFRRVDGVTLFGGVLDAQGSGLWACKNSKSSCPPGATSLEFSNSKNIMVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFHIVIN CQNVK QGLKVSAAGNSPNTDGIHVA S  VTILNSIIG  DDCI
Sbjct: 156 LTSLNSQMFHIVINGCQNVKAQGLKVSAAGNSPNTDGIHVALSSTVTILNSIIGTGDDCI 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGTSNLWIE V CGPGHGISIGSLGRE+QE+GV+NVTVKSATFTNTQNGVRIKTWG+
Sbjct: 216 SIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGVENVTVKSATFTNTQNGVRIKTWGK 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFA++++F+DIVMVNVENPIIIDQNYCP+NKGCPGQDSGVKISDV YR+IHGTSATQ
Sbjct: 276 PSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNKGCPGQDSGVKISDVTYRNIHGTSATQ 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           VAMKFDCSSKFPCSDITLEDVKLS KNEAA+ASCSHAEGS A LVQPSSCL
Sbjct: 336 VAMKFDCSSKFPCSDITLEDVKLSCKNEAAEASCSHAEGSAAGLVQPSSCL 386

[Close]

BLAST of HG10011820 vs. ExPASy TrEMBL
Match: A0A6J1EYE0 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439559 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 234/286 (81.82%), Postives = 259/286 (90.56%), Query Frame = 0


Query: 6   ENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGLTSLN 65
           ENWITFRHVDGVSVFGGVLD QG GLW CKNS  SCP GATSLEFSNSKNIIVSGLTSLN
Sbjct: 102 ENWITFRHVDGVSVFGGVLDGQGAGLWDCKNSHKSCPLGATSLEFSNSKNIIVSGLTSLN 161

Query: 66  SQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISIGPG 125
           SQMFHIV N CQNVKMQG+K+SAAGNSPNTDGIHVA S  VTI++S I   DDCIS+GPG
Sbjct: 162 SQMFHIVANGCQNVKMQGIKISAAGNSPNTDGIHVALSSQVTIISSSISTGDDCISVGPG 221

Query: 126 TSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPSKGF 185
           TSNLWIE V CGPGHGISIGSLG++++E+GVQNVTVK+ TFTNTQNGVRIKTWG+PSKGF
Sbjct: 222 TSNLWIENVACGPGHGISIGSLGKDVEEDGVQNVTVKTTTFTNTQNGVRIKTWGKPSKGF 281

Query: 186 AKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVAMKF 245
           A+NILF+DI+M NV+NPIIIDQNYCP NKGCPGQ SGV+IS+V Y++IHGTSATQVAMKF
Sbjct: 282 ARNILFQDIIMNNVQNPIIIDQNYCPNNKGCPGQVSGVEISNVSYQNIHGTSATQVAMKF 341

Query: 246 DCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           DCSSKFPC  ITLEDVKLSYKN+ A+ASCS+A+G+ A LVQPSSCL
Sbjct: 342 DCSSKFPCRGITLEDVKLSYKNDVAEASCSNADGTAAGLVQPSSCL 387

[Close]

BLAST of HG10011820 vs. ExPASy TrEMBL
Match: A0A6J1DRR7 (polygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111023699 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126
Identity = 220/290 (75.86%), Postives = 255/290 (87.93%), Query Frame = 0


Query: 2   IANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGL 61
           I N +NWI FR VDGV+V GG+LDAQG  LWACK S  +CPSGATSLEFSNSKNIIV+GL
Sbjct: 101 IGNSDNWIIFRLVDGVTVLGGILDAQGTALWACKKSGQNCPSGATSLEFSNSKNIIVNGL 160

Query: 62  TSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCIS 121
           TSLNSQMFHIV+N+CQNVKM G+K+SA G+SPNTDGIHV +S  VT+++S IG  DDCIS
Sbjct: 161 TSLNSQMFHIVVNECQNVKMHGIKISAPGDSPNTDGIHVQRSSDVTVIHSNIGTGDDCIS 220

Query: 122 IGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRP 181
           IGPGTSNLWIE V CGPGHGISIGSLG+E QE GVQNVTVKSATFT+T+NGVRIKTWGRP
Sbjct: 221 IGPGTSNLWIENVACGPGHGISIGSLGKEEQEAGVQNVTVKSATFTDTKNGVRIKTWGRP 280

Query: 182 SKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQV 241
           S GFAKNI+F+DI+M+NV+NPIIIDQNYCP  + CPGQDSGVKIS+V Y++IHG SA++V
Sbjct: 281 SNGFAKNIIFQDILMLNVQNPIIIDQNYCPHAQACPGQDSGVKISNVTYKNIHGISASEV 340

Query: 242 AMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           A+KFDCS KFPCS I +EDV+LS +NEAA+ASCSHA G+ A L+QPSSCL
Sbjct: 341 AVKFDCSPKFPCSGIRVEDVRLSCQNEAAEASCSHAGGTAAGLLQPSSCL 390

[Close]

BLAST of HG10011820 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 408.3 bits (1048), Expect = 5.2e-114
Identity = 192/291 (65.98%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VI     WI F+H+DG+SV+GGVLDAQG  LW+CK S  +CPSGATS+ F +S+N+++SG
Sbjct: 98  VIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISG 157

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFH+ IN C NVK+ G+KVSA GNSPNTDGIHV  S  V+ILNS I   DDC+
Sbjct: 158 LTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCV 217

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGT+ LWIE V CGPGHGISIGSLG+E  E GVQN+TVK+ATFT T+NGVRIK+W R
Sbjct: 218 SIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWAR 277

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFAKNI F+  VM NV+NPI+IDQNYCP N+ CP Q SG+KISDV +  IHGTSAT+
Sbjct: 278 PSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATE 337

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           V +K DCSSK PC+ I ++DVKL+Y+N+ A   CSHA GS A   +P+SCL
Sbjct: 338 VGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of HG10011820 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 395.2 bits (1014), Expect = 4.5e-110
Identity = 191/291 (65.64%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSG 60
           VI N + WI F+H+DG++V+GGVLDA+G  LW CK S  +CPSGAT++ F +S N++VSG
Sbjct: 96  VIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSGATTIGFQSSSNVVVSG 155

Query: 61  LTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCI 120
           LTSLNSQMFH+VIN C NVK+QG+KV AAGNSPNTDGIHV  S  V+I N+ I   DDC+
Sbjct: 156 LTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCV 215

Query: 121 SIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGR 180
           SIGPGT+ LWIE V CGPGHGISIGSLG++  E+GVQNVTVK+ TFT T NGVRIK+W R
Sbjct: 216 SIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWAR 275

Query: 181 PSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQ 240
           PS GFAKNI F+  VM NVENPIIIDQNYCP++  CP Q SG+KISDV +  IHGTSAT+
Sbjct: 276 PSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDH-DCPRQVSGIKISDVLFVDIHGTSATE 335

Query: 241 VAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           V +K DCSSK PC+ I LEDVKL+Y+N+ A ++C+HA G  A   QP +CL
Sbjct: 336 VGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASACTHAGGIEAGFFQP-NCL 384

[Close]

BLAST of HG10011820 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 335.9 bits (860), Expect = 3.3e-92
Identity = 155/285 (54.39%), Postives = 208/285 (72.98%), Query Frame = 0


Query: 8   WITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGLTSLNSQ 67
           WI F  V+  S+ GG  DA+  G W+C+ S  +CP G  S+ F+++K++I+SG+ S+NSQ
Sbjct: 108 WILFNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQ 167

Query: 68  MFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCISIGPGTS 127
           + H+ +N C NV ++ +K+ A GNSPNTDG HV  S GVT   S +   DDC++IGPGT 
Sbjct: 168 VTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTR 227

Query: 128 NLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRPSKGFAK 187
           NL I K+ CGPGHG+SIGSL +E++E+GV+NVTV S+ FT +QNGVRIK+W RPS GF +
Sbjct: 228 NLLITKLACGPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVR 287

Query: 188 NILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQVAMKFDC 247
            + F+D+VM NVENPIIIDQNYCP ++GCP + SGVKIS V Y++I GTSATQ AMK  C
Sbjct: 288 TVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVC 347

Query: 248 SSKFPCSDITLEDVKLSY-KNEAAKASCSHAEGSVASLVQPSSCL 292
           S   PC+ ITL+D+KL+Y K   A + C +A G    ++QP+SCL
Sbjct: 348 SKSSPCTGITLQDIKLTYNKGTPATSFCFNAVGKSLGVIQPTSCL 392

[Close]

BLAST of HG10011820 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 332.8 bits (852), Expect = 2.8e-91
Identity = 154/290 (53.10%), Postives = 206/290 (71.03%), Query Frame = 0


Query: 2   IANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNSKNSCPSGATSLEFSNSKNIIVSGL 61
           + N   WI F  V+ +S+ GG LDA+G   WAC+ S  SCP GA S+ F+ + +++VSGL
Sbjct: 103 LGNSGYWILFVKVNRISIIGGTLDARGASFWACRKSGKSCPVGARSMTFNWANDVVVSGL 162

Query: 62  TSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDCIS 121
           TS+NSQ  H+VIN C NV ++ +K+ A   SPNTDG+HV  S GVT+ +      DDCIS
Sbjct: 163 TSINSQTTHLVINSCNNVIVRKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCIS 222

Query: 122 IGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWGRP 181
           IGPGT NL++ K+ CGPGHGISIGSLGR+  E GV+N+T+ ++ F+ + NGVRIKTW R 
Sbjct: 223 IGPGTRNLYMSKLNCGPGHGISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQ 282

Query: 182 SKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSATQV 241
           S GF +N+LF++++M NV+NPII+DQNYCP N+GCP Q SGVKIS V YR+I GTS TQ 
Sbjct: 283 STGFVRNVLFQNLIMKNVQNPIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQ 342

Query: 242 AMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           A+ FDCS   PC  I L D+KL++   +A ++C + +G  A +V P  CL
Sbjct: 343 ALTFDCSRSNPCQAIRLHDIKLTFNGRSATSTCKNIKGVKAGVVMPQGCL 392

[Close]

BLAST of HG10011820 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 331.6 bits (849), Expect = 6.2e-91
Identity = 167/292 (57.19%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   VIANFENWITFRHVDGVSVFGGVLDAQGFGLWACKNS-KNSCPSGATSLEFSNSKNIIVS 60
           +IA+ ++WI F  V  VS++GG+LDAQG  LW CKN+  ++CP+GA SL FS S NI +S
Sbjct: 108 IIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKIS 167

Query: 61  GLTSLNSQMFHIVINDCQNVKMQGLKVSAAGNSPNTDGIHVAQSLGVTILNSIIGIDDDC 120
           GLTS+NSQ FHIVI++  NV + G+KVSA  NSPNTDGIHV  S  V I NS IG  DDC
Sbjct: 168 GLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDC 227

Query: 121 ISIGPGTSNLWIEKVTCGPGHGISIGSLGREIQENGVQNVTVKSATFTNTQNGVRIKTWG 180
           ISIGPG++N++I+ + CGPGHGISIGSLGR  +E GV NVTV +  F  T NGVRIKTWG
Sbjct: 228 ISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWG 287

Query: 181 RPSKGFAKNILFKDIVMVNVENPIIIDQNYCPENKGCPGQDSGVKISDVKYRSIHGTSAT 240
           + S  FA+NI+F+ I M  V+NPIIIDQ+YC  +K CP Q+SGVK+S+V+Y  IHGTS T
Sbjct: 288 KDSNSFARNIVFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNT 347

Query: 241 QVAMKFDCSSKFPCSDITLEDVKLSYKNEAAKASCSHAEGSVASLVQPSSCL 292
           +VA+  DCS + PC+ I ++DV L   +  A+ASC +A GS   +V  + CL
Sbjct: 348 EVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

The following BLAST results are available for this feature:

BLAST of HG10011820 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27707.1	2.8e-146	87.97	polygalacturonase-like [Cucumis melo var. makuwa]	[more]
KAA0056020.1	1.1e-145	87.63	polygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_004139060.1	1.2e-144	87.97	polygalacturonase [Cucumis sativus] >KGN66537.1 hypothetical protein Csa_007593 ...	[more]
XP_038888709.1	8.5e-143	86.94	polygalacturonase-like [Benincasa hispida]	[more]
XP_023511455.1	1.1e-134	82.17	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10011820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	1.5e-121	71.92	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	8.7e-90	57.19	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q6H9K0	1.3e-64	44.44	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q9SFB7	1.7e-61	44.60	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]
P35336	2.2e-61	45.80	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]

BLAST of HG10011820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DV94	1.4e-146	87.97	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A5A7ULI9	5.2e-146	87.63	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3...	[more]
A0A0A0M095	5.8e-145	87.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627460 PE=3 SV=1	[more]
A0A6J1EYE0	1.2e-134	81.82	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111439559 PE=3 SV=1	[more]
A0A6J1DRR7	3.5e-126	75.86	polygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111023699 PE=3 SV=1	[more]

BLAST of HG10011820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	5.2e-114	65.98	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	4.5e-110	65.64	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	3.3e-92	54.39	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	2.8e-91	53.10	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	6.2e-91	57.19	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 76..102 e-value: 420.0 score: 9.7 coord: 103..124 e-value: 650.0 score: 8.6 coord: 156..177 e-value: 16.0 score: 14.4 coord: 126..146 e-value: 4900.0 score: 2.3 coord: 186..207 e-value: 5300.0 score: 2.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 3..290 e-value: 6.3E-92 score: 310.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 6..277 e-value: 6.6E-82 score: 275.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 133..146
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..290
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 1..290
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 7..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011820.1	HG10011820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0004650	polygalacturonase activity