HG10011816 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011816
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Phloem filament protein
Location	Chr01: 12819349 .. 12819948 (-)
RNA-Seq Expression	HG10011816
Synteny	HG10011816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTATGAGCCAACAGGCGAGTGGGTCCCATACCCTGATGTAAACACGGTTTGTGTAATACATATTGGAAACTTTGCAGTGGATGAACACAACAAAAATACTGGAGATGATTTGAAATTCGATCGAGTTATATGGGGAGCGTATAACGAGATTAACGATGATACATTAAAGCATGATGTGTTTCTTGAAGCGACAAACGGTAAAGGAGATACAAATACATATCAAGCAAAGGTGTTGGTGGAATATGTAGATGGAAAAAAAGAGGAGAAACTCATTTCTTTCAATCTAGCGTATAAGGATCCAGAAGGTAGAATCTGGAAGAAAATTCCTGACTATGGCGAGTCTTGTGTGCAAGATGTTGCAGAGTTTGCAGTGGATGAACATAATAACGGTGGTGATAATCTTGTATACCAGTCCGTTGTTGATGGTTGGTATCGCGAGGTGAAGCCAAATGCTATACAGTACGATCTTTATATTAAGGCAAAGGATTGCTTTGGACGTGAGCGCATCTACAGAGCTATTGTGCTCGAAGAGGAACCTCTTACTAAGAAAATTCGAACACTCGAATATTTCAAAATTACTCCAAGAAAATGTTGA

mRNA sequence

ATGAGTTATGAGCCAACAGGCGAGTGGGTCCCATACCCTGATGTAAACACGGTTTGTGTAATACATATTGGAAACTTTGCAGTGGATGAACACAACAAAAATACTGGAGATGATTTGAAATTCGATCGAGTTATATGGGGAGCGTATAACGAGATTAACGATGATACATTAAAGCATGATGTGTTTCTTGAAGCGACAAACGGTAAAGGAGATACAAATACATATCAAGCAAAGGTGTTGGTGGAATATGTAGATGGAAAAAAAGAGGAGAAACTCATTTCTTTCAATCTAGCGTATAAGGATCCAGAAGGTAGAATCTGGAAGAAAATTCCTGACTATGGCGAGTCTTGTGTGCAAGATGTTGCAGAGTTTGCAGTGGATGAACATAATAACGGTGGTGATAATCTTGTATACCAGTCCGTTGTTGATGGTTGGTATCGCGAGGTGAAGCCAAATGCTATACAGTACGATCTTTATATTAAGGCAAAGGATTGCTTTGGACGTGAGCGCATCTACAGAGCTATTGTGCTCGAAGAGGAACCTCTTACTAAGAAAATTCGAACACTCGAATATTTCAAAATTACTCCAAGAAAATGTTGA

Coding sequence (CDS)

ATGAGTTATGAGCCAACAGGCGAGTGGGTCCCATACCCTGATGTAAACACGGTTTGTGTAATACATATTGGAAACTTTGCAGTGGATGAACACAACAAAAATACTGGAGATGATTTGAAATTCGATCGAGTTATATGGGGAGCGTATAACGAGATTAACGATGATACATTAAAGCATGATGTGTTTCTTGAAGCGACAAACGGTAAAGGAGATACAAATACATATCAAGCAAAGGTGTTGGTGGAATATGTAGATGGAAAAAAAGAGGAGAAACTCATTTCTTTCAATCTAGCGTATAAGGATCCAGAAGGTAGAATCTGGAAGAAAATTCCTGACTATGGCGAGTCTTGTGTGCAAGATGTTGCAGAGTTTGCAGTGGATGAACATAATAACGGTGGTGATAATCTTGTATACCAGTCCGTTGTTGATGGTTGGTATCGCGAGGTGAAGCCAAATGCTATACAGTACGATCTTTATATTAAGGCAAAGGATTGCTTTGGACGTGAGCGCATCTACAGAGCTATTGTGCTCGAAGAGGAACCTCTTACTAAGAAAATTCGAACACTCGAATATTTCAAAATTACTCCAAGAAAATGTTGA

Protein sequence

MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHDVFLEATNGKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEGRIWKKIPDYGESCVQDVAEFAVDEHNNGGDNLVYQSVVDGWYREVKPNAIQYDLYIKAKDCFGRERIYRAIVLEEEPLTKKIRTLEYFKITPRKC

Homology

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BLAST of HG10011816 vs. NCBI nr
Match: XP_038887075.1 (uncharacterized protein LOC120077251 [Benincasa hispida] >XP_038887076.1 uncharacterized protein LOC120077253 [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-41
Identity = 93/201 (46.27%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS++   EW+P PDV T CV  I NF V++HNK +GDDL    VI G + E++D   KH 
Sbjct: 23  MSFQEKEEWLPIPDVTTPCVKEIVNFVVNQHNKESGDDLVLKGVIKGWFKELSDVKTKHR 82

Query: 61  VFLEATNGKGDTNTYQAKV-LVEYVDGKKEEKLISFNLAYKDPEGRIWKKIPDYGESCVQ 120
           +++EATN KG    Y+A V ++E  D ++   L+SF++ Y D   + W +IP+  ESCVQ
Sbjct: 83  LYIEATNNKGVVQLYEAIVCVIEKGDKQRVRTLLSFHVGYLDENEQFWIEIPNVEESCVQ 142

Query: 121 DVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPN-AIQYDLYIKAKDCFGRERIYRAIVL 180
           +VA+FAV E+N    DNLVY     GWY+EV     + +DL IK KDCFGR R Y+A+V 
Sbjct: 143 EVAKFAVAEYNKQADDNLVYICTTQGWYQEVNAEYGLLFDLRIKTKDCFGRVREYKALVS 202

Query: 181 EEEPLTKKIRTLEYFKITPRK 199
           E+    +KIR L  FK+ P+K
Sbjct: 203 EDRQPNEKIRILISFKLVPKK 223

[Close]

BLAST of HG10011816 vs. NCBI nr
Match: XP_011660324.1 (uncharacterized protein LOC105436367 [Cucumis sativus] >KGN66905.1 hypothetical protein Csa_007525 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 8.4e-41
Identity = 97/202 (48.02%), Postives = 131/202 (64.85%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS    GEW   P   T CV+ I NFAV EHNK TG+ L    VI G + E+ D  LK  
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  VFLEATNGKGDTNTYQAKVLV-EYVDGKKEEKLISFNLAYKDPEGRIWKKIPDYGESCVQ 120
           +++ A N KG   TY+A V V E  D K+ +KL+SFN+ Y D +   W  I D   SCVQ
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120

Query: 121 DVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKP-NAIQYDLYIKAKDCFGRERIYRAIVL 180
           DVA+FAV +HN +  D+LVY S+  GWYRE+ P NAI +++++  KDCFGR R ++A+VL
Sbjct: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180

Query: 181 EEEPLTKKIRTLEYFKITPRKC 200
           E++P  +KIRTL+YF++  +KC
Sbjct: 181 EDKPQKEKIRTLKYFEVI-KKC 201

[Close]

BLAST of HG10011816 vs. NCBI nr
Match: KAA0041955.1 (Phloem filament protein [Cucumis melo var. makuwa] >TYK17890.1 Phloem filament protein [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-39
Identity = 93/204 (45.59%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS     EW+  PD NT CVI +   AV++HNK +GD+L F RVI G + EI+D T+KH 
Sbjct: 1   MSCGSKKEWIKIPDCNTPCVIEVAKDAVNQHNKASGDNLVFKRVIIGWFLEIDDHTIKHR 60

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEGR--IWKKIPDYGESCV 120
           +++E  N KG        ++V   DGK+   L+S +  Y D +     W KIPD  + CV
Sbjct: 61  LYIEVINSKGVVLIISIVIVVVTKDGKRVRTLVSSHHGYPDEKDLFIFWNKIPDVNQPCV 120

Query: 121 QDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPNA--IQYDLYIKAKDCFGRERIYRAI 180
           Q+VA++AV++HN +  D+LVY S V+GWY E   ++  + Y L+IKAK+C GR R Y A+
Sbjct: 121 QNVAKWAVNKHNTDTHDHLVYVSTVEGWYIEAADHSGTLVYKLHIKAKECIGRVRDYCAV 180

Query: 181 VLEEEPLTKKIRT-LEYFKITPRK 199
           V EE+PLT++IRT LE+F I P+K
Sbjct: 181 VKEEKPLTERIRTLLEFFLIPPKK 204

[Close]

BLAST of HG10011816 vs. NCBI nr
Match: KAE8646075.1 (hypothetical protein Csa_016329 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-38
Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS +    W+  PD  T CV  +    V++HNK +GD L + RVI G + EI+D  +KH 
Sbjct: 226 MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 285

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEGRI--WKKIPDYGESCV 120
           + +E    KG    Y+  ++V   DGK+   LISF   Y D +  +  W KIPD  +SCV
Sbjct: 286 LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 345

Query: 121 QDVAEFAVDEHNN-GGDNLVYQSVVDGWYREVKPNAIQYDLYIKAKDCFGRERIYRAIVL 180
           QD A++AV EHN    D L Y S V+GWY EV P  I + L+IKAK+C GR R Y A+V 
Sbjct: 346 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 405

Query: 181 EEEPLTKKIRTLE-YFKITPRK 199
           EE+PLT+KI+ LE ++ I P+K
Sbjct: 406 EEKPLTEKIKKLEDFYLIRPKK 427

[Close]

BLAST of HG10011816 vs. NCBI nr
Match: KAA0043224.1 (Phloem filament protein [Cucumis melo var. makuwa] >TYK21340.1 Phloem filament protein [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-36
Identity = 91/203 (44.83%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS    GEW+  PDV+T CV  I  FAV++HN  +G+ L    V+ G + E++ D LKH 
Sbjct: 1   MSCLEKGEWIKIPDVSTPCVHDIATFAVNQHNNESGEKLTLKSVVKGWFLELSYDRLKHR 60

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDG-KKEEKLISFNLAYKDPEGRI-WKKIPDYGESCV 120
           + L ATN KG   TY+A V V    G ++  KL+SFN  Y D  G + W +I D  + CV
Sbjct: 61  LILTATNDKGVVKTYEAIVCVIEKSGFQRVRKLLSFNAGYLDENGDLFWIEILDINQPCV 120

Query: 121 QDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPN-AIQYDLYIKAKDCFGRERIYRAIV 180
           QDVA+ AV +HN    D+LVY S+  GWYRE+  N AI +++++  KDCFGR R ++A+V
Sbjct: 121 QDVAKAAVAQHNEKEHDSLVYISITQGWYRELDVNYAILFNIHLITKDCFGRVREFKALV 180

Query: 181 LEEEPLTKKIRTLEYFKITPRKC 200
           LE++    KIRTL+ F++  +KC
Sbjct: 181 LEDKHGKDKIRTLKSFEVI-KKC 202

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BLAST of HG10011816 vs. ExPASy Swiss-Prot
Match: Q84WT8 (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-04
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 108 KKIPDYGESCVQDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPNAIQYDLYIKAKDCF 167
           K I +  +  V  VA++A++EHN    + LV+  VV+G  + V  +  +YDL I AKD  
Sbjct: 33  KPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVV--SGTKYDLKIAAKDGG 92

Query: 168 GRERIYRAIVLEEEPLTKKIRTLEYFK 194
           G+ + Y A+V+E+  L  K  +LE FK
Sbjct: 93  GKIKNYEAVVVEKLWLHSK--SLESFK 115

[Close]

BLAST of HG10011816 vs. ExPASy TrEMBL
Match: A0A0A0LYF4 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_1G710160 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-41
Identity = 97/202 (48.02%), Postives = 131/202 (64.85%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS    GEW   P   T CV+ I NFAV EHNK TG+ L    VI G + E+ D  LK  
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKETGEKLTLKSVIKGWFLELGDVKLKFR 60

Query: 61  VFLEATNGKGDTNTYQAKVLV-EYVDGKKEEKLISFNLAYKDPEGRIWKKIPDYGESCVQ 120
           +++ A N KG   TY+A V V E  D K+ +KL+SFN+ Y D +   W  I D   SCVQ
Sbjct: 61  LYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVDTKASCVQ 120

Query: 121 DVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKP-NAIQYDLYIKAKDCFGRERIYRAIVL 180
           DVA+FAV +HN +  D+LVY S+  GWYRE+ P NAI +++++  KDCFGR R ++A+VL
Sbjct: 121 DVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVREFKALVL 180

Query: 181 EEEPLTKKIRTLEYFKITPRKC 200
           E++P  +KIRTL+YF++  +KC
Sbjct: 181 EDKPQKEKIRTLKYFEVI-KKC 201

[Close]

BLAST of HG10011816 vs. ExPASy TrEMBL
Match: A0A5D3D2J2 (Phloem filament protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001660 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 93/204 (45.59%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS     EW+  PD NT CVI +   AV++HNK +GD+L F RVI G + EI+D T+KH 
Sbjct: 1   MSCGSKKEWIKIPDCNTPCVIEVAKDAVNQHNKASGDNLVFKRVIIGWFLEIDDHTIKHR 60

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEGR--IWKKIPDYGESCV 120
           +++E  N KG        ++V   DGK+   L+S +  Y D +     W KIPD  + CV
Sbjct: 61  LYIEVINSKGVVLIISIVIVVVTKDGKRVRTLVSSHHGYPDEKDLFIFWNKIPDVNQPCV 120

Query: 121 QDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPNA--IQYDLYIKAKDCFGRERIYRAI 180
           Q+VA++AV++HN +  D+LVY S V+GWY E   ++  + Y L+IKAK+C GR R Y A+
Sbjct: 121 QNVAKWAVNKHNTDTHDHLVYVSTVEGWYIEAADHSGTLVYKLHIKAKECIGRVRDYCAV 180

Query: 181 VLEEEPLTKKIRT-LEYFKITPRK 199
           V EE+PLT++IRT LE+F I P+K
Sbjct: 181 VKEEKPLTERIRTLLEFFLIPPKK 204

[Close]

BLAST of HG10011816 vs. ExPASy TrEMBL
Match: A0A0A0K3W6 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.2e-38
Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS +    W+  PD  T CV  +    V++HNK +GD L + RVI G + EI+D  +KH 
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDHAIKHR 60

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEGRI--WKKIPDYGESCV 120
           + +E    KG    Y+  ++V   DGK+   LISF   Y D +  +  W KIPD  +SCV
Sbjct: 61  LIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIPDVKKSCV 120

Query: 121 QDVAEFAVDEHNN-GGDNLVYQSVVDGWYREVKPNAIQYDLYIKAKDCFGRERIYRAIVL 180
           QD A++AV EHN    D L Y S V+GWY EV P  I + L+IKAK+C GR R Y A+V 
Sbjct: 121 QDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVRDYIAVVK 180

Query: 181 EEEPLTKKIRTLE-YFKITPRK 199
           EE+PLT+KI+ LE ++ I P+K
Sbjct: 181 EEKPLTEKIKKLEDFYLIRPKK 202

[Close]

BLAST of HG10011816 vs. ExPASy TrEMBL
Match: A0A5A7TIS8 (Phloem filament protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00070 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 91/203 (44.83%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 1   MSYEPTGEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHD 60
           MS    GEW+  PDV+T CV  I  FAV++HN  +G+ L    V+ G + E++ D LKH 
Sbjct: 1   MSCLEKGEWIKIPDVSTPCVHDIATFAVNQHNNESGEKLTLKSVVKGWFLELSYDRLKHR 60

Query: 61  VFLEATNGKGDTNTYQAKVLVEYVDG-KKEEKLISFNLAYKDPEGRI-WKKIPDYGESCV 120
           + L ATN KG   TY+A V V    G ++  KL+SFN  Y D  G + W +I D  + CV
Sbjct: 61  LILTATNDKGVVKTYEAIVCVIEKSGFQRVRKLLSFNAGYLDENGDLFWIEILDINQPCV 120

Query: 121 QDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPN-AIQYDLYIKAKDCFGRERIYRAIV 180
           QDVA+ AV +HN    D+LVY S+  GWYRE+  N AI +++++  KDCFGR R ++A+V
Sbjct: 121 QDVAKAAVAQHNEKEHDSLVYISITQGWYRELDVNYAILFNIHLITKDCFGRVREFKALV 180

Query: 181 LEEEPLTKKIRTLEYFKITPRKC 200
           LE++    KIRTL+ F++  +KC
Sbjct: 181 LEDKHGKDKIRTLKSFEVI-KKC 202

[Close]

BLAST of HG10011816 vs. ExPASy TrEMBL
Match: A0A1S3BHQ3 (uncharacterized protein LOC103489701 OS=Cucumis melo OX=3656 GN=LOC103489701 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 79/196 (40.31%), Postives = 117/196 (59.69%), Query Frame = 0


Query: 8   EWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHDVFLEATN 67
           +W+   D  T CVI+ G  AVD+HNK  GD+L F +VI G Y EI+ +  K  + +E  N
Sbjct: 9   QWIQIHDTTTPCVINFGKHAVDDHNKEKGDNLVFKKVIIGWYLEIDYNKTKLRLIIEVVN 68

Query: 68  GKGDTNTYQAKVLVEYVDGKKEEKLISFNLAYKDPEG--RIWKKIPDYGESCVQDVAEFA 127
            KG+  T++  ++V+  DGK  + +ISF   + D +     W KI +  E  VQ++A+FA
Sbjct: 69  SKGEVITFEVVIVVDDKDGKTVKTVISFVPGHIDEKNPWTFWIKIHNVTEPHVQEIAKFA 128

Query: 128 VDEHNN-GGDNLVYQSVVDGWYR-EVKPNAIQYDLYIKAKDCFGRERIYRAIVLEEEPLT 187
           V+EHN    DNL+Y  +++GWY     P    + L++KAKDC GR R Y A+V EE+ L 
Sbjct: 129 VEEHNKITHDNLIYICIIEGWYHVSTIPPVTLWKLHLKAKDCLGRVREYEALVKEEKLLP 188

Query: 188 KKIRTLEYFKITPRKC 200
           K +  LE+F + P+ C
Sbjct: 189 KHVLKLEHFIVIPKIC 204

[Close]

BLAST of HG10011816 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.7e-05
Identity = 33/87 (37.93%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 108 KKIPDYGESCVQDVAEFAVDEHN-NGGDNLVYQSVVDGWYREVKPNAIQYDLYIKAKDCF 167
           K I +  +  V  VA++A++EHN    + LV+  VV+G  + V  +  +YDL I AKD  
Sbjct: 33  KPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVV--SGTKYDLKIAAKDGG 92

Query: 168 GRERIYRAIVLEEEPLTKKIRTLEYFK 194
           G+ + Y A+V+E+  L  K  +LE FK
Sbjct: 93  GKIKNYEAVVVEKLWLHSK--SLESFK 115

[Close]

BLAST of HG10011816 vs. TAIR 10
Match: AT5G47550.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.9e-04
Identity = 25/73 (34.25%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 7  GEWVPYPDVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHDVFLEAT 66
          G W P  +V    V+ IG FAV E+NK +   LKF+ V+ G    ++    +  V   A 
Sbjct: 29 GGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKV--AAN 88

Query: 67 NGKGDTNTYQAKV 80
          +G G +  Y A V
Sbjct: 89 DGDGVSKNYLAIV 99

[Close]

BLAST of HG10011816 vs. TAIR 10
Match: AT5G12140.1 (cystatin-1 )

HSP 1 Score: 42.0 bits (97), Expect = 6.7e-04
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 14 DVNTVCVIHIGNFAVDEHNKNTGDDLKFDRVIWGAYNEINDDTLKHDVFLEATNGKGDTN 73
          + N + V  +  FAVDEHNKN    L++ R++ GA  ++   T+ H   L      G+TN
Sbjct: 19 NANDLQVESLARFAVDEHNKNENLTLEYKRLL-GAKTQVVAGTMHH---LTVEVADGETN 78

Query: 74 -TYQAKVLVEYVDGKKEEKLISFN 97
            Y+AKVL +  +  K+  L SFN
Sbjct: 79 KVYEAKVLEKAWENLKQ--LESFN 96

The following BLAST results are available for this feature:

BLAST of HG10011816 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887075.1	1.7e-41	46.27	uncharacterized protein LOC120077251 [Benincasa hispida] >XP_038887076.1 unchara...	[more]
XP_011660324.1	8.4e-41	48.02	uncharacterized protein LOC105436367 [Cucumis sativus] >KGN66905.1 hypothetical ...	[more]
KAA0041955.1	2.1e-39	45.59	Phloem filament protein [Cucumis melo var. makuwa] >TYK17890.1 Phloem filament p...	[more]
KAE8646075.1	6.6e-38	44.55	hypothetical protein Csa_016329 [Cucumis sativus]	[more]
KAA0043224.1	2.1e-36	44.83	Phloem filament protein [Cucumis melo var. makuwa] >TYK21340.1 Phloem filament p...	[more]

BLAST of HG10011816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WT8	3.8e-04	37.93	Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=...	[more]

BLAST of HG10011816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYF4	4.1e-41	48.02	Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_1G710160 PE=4 SV=1	[more]
A0A5D3D2J2	1.0e-39	45.59	Phloem filament protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K3W6	3.2e-38	44.55	Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=4 SV=1	[more]
A0A5A7TIS8	1.0e-36	44.83	Phloem filament protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHQ3	1.5e-32	40.31	uncharacterized protein LOC103489701 OS=Cucumis melo OX=3656 GN=LOC103489701 PE=...	[more]

BLAST of HG10011816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16500.1	2.7e-05	37.93	Cystatin/monellin superfamily protein	[more]
AT5G47550.1	3.9e-04	34.25	Cystatin/monellin superfamily protein	[more]
AT5G12140.1	6.7e-04	36.90	cystatin-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009994	Phloem filament PP1	PFAM	PF07430	PP1	coord: 117..192 e-value: 9.1E-23 score: 80.1
IPR000010	Cystatin domain	PFAM	PF16845	SQAPI	coord: 14..96 e-value: 2.2E-11 score: 44.0
None	No IPR available	GENE3D	3.10.450.10		coord: 107..198 e-value: 1.2E-12 score: 49.7
None	No IPR available	GENE3D	3.10.450.10		coord: 5..103 e-value: 1.2E-13 score: 52.9
None	No IPR available	PANTHER	PTHR47116:SF5	PHLOEM FILAMENT PROTEIN	coord: 106..197 coord: 7..97
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 7..99
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 107..193
IPR027214	Cystatin	PANTHER	PTHR47116	PHLOEM FILAMENT PROTEIN	coord: 106..197
IPR027214	Cystatin	PANTHER	PTHR47116	PHLOEM FILAMENT PROTEIN	coord: 7..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011816.1	HG10011816.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity