Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATGGCTATTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCCCTTCCTCACTCTCTTAGATTCAACGCCGCCGCCGTCTCCAATCCAAACTCTCAAGATTCCGATCCGAATCGAACGAATCGACCGCGGGAGCCACCGCACGGCTGCTTACCGGAGGAAGTAGAAGAAGAAGACGAATACGAATATGGCGGAGCCACCACCACCACCGCCACCGTGGCTGCGCTTAGTCGAAACAGCTCTGTTTCTTCATCTGCTTCGGGATTTCACTCGGCAGTGAAGAGAGCTTTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGTGGAGATTCGAAGGAAAGGGGAAGAACAGGAGGATCTGTGATGAAGAAGAAGAAGAAGAAGAACGCGGCAGGGAAAATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAA
mRNA sequence
ATGGCGGATGGCTATTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCCCTTCCTCACTCTCTTAGATTCAACGCCGCCGCCGTCTCCAATCCAAACTCTCAAGATTCCGATCCGAATCGAACGAATCGACCGCGGGAGCCACCGCACGGCTGCTTACCGGAGGAAGTAGAAGAAGAAGACGAATACGAATATGGCGGAGCCACCACCACCACCGCCACCGTGGCTGCGCTTAGTCGAAACAGCTCTGTTTCTTCATCTGCTTCGGGATTTCACTCGGCAGTGAAGAGAGCTTTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGTGGAGATTCGAAGGAAAGGGGAAGAACAGGAGGATCTGTGATGAAGAAGAAGAAGAAGAAGAACGCGGCAGGGAAAATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAA
Coding sequence (CDS)
ATGGCGGATGGCTATTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCCCTTCCTCACTCTCTTAGATTCAACGCCGCCGCCGTCTCCAATCCAAACTCTCAAGATTCCGATCCGAATCGAACGAATCGACCGCGGGAGCCACCGCACGGCTGCTTACCGGAGGAAGTAGAAGAAGAAGACGAATACGAATATGGCGGAGCCACCACCACCACCGCCACCGTGGCTGCGCTTAGTCGAAACAGCTCTGTTTCTTCATCTGCTTCGGGATTTCACTCGGCAGTGAAGAGAGCTTTATCGATGCGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGTGGAGATTCGAAGGAAAGGGGAAGAACAGGAGGATCTGTGATGAAGAAGAAGAAGAAGAAGAACGCGGCAGGGAAAATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAA
Protein sequence
MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL
Homology
BLAST of HG10011701 vs. NCBI nr
Match:
KAG7015455.1 (hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 239.2 bits (609), Expect = 2.7e-59
Identity = 141/182 (77.47%), Postives = 152/182 (83.52%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPH 60
MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR H
Sbjct: 1 MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QH 60
Query: 61 GCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVA 120
LPEE EEE+E EYGG +A AALSRN+SVSSS SGFHSAVKRALSMRRSSSVA
Sbjct: 61 SRLPEEEEEEEEEEDEYGG--EVSARAAALSRNNSVSSSVSGFHSAVKRALSMRRSSSVA 120
Query: 121 ERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIF 178
ERYCRIHDQFAT ASPI+DDEME GDSKE +TGGSV KKKKKKN+AGKIVRACKR+F
Sbjct: 121 ERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAGKIVRACKRLF 176
BLAST of HG10011701 vs. NCBI nr
Match:
KAA0060595.1 (hypothetical protein E6C27_scaffold22G004710 [Cucumis melo var. makuwa] >TYK02276.1 hypothetical protein E5676_scaffold18G00790 [Cucumis melo var. makuwa])
HSP 1 Score: 237.7 bits (605), Expect = 7.9e-59
Identity = 136/172 (79.07%), Postives = 145/172 (84.30%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHG 60
MADGYSKIKAACKFKSRSIDYSDLSSLPHSL FN AAVSNP S S+ +RTNRP+EPPH
Sbjct: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLTFNNAAVSNPISHHSNHSRTNRPQEPPHR 60
Query: 61 CLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERY 120
LPEE EE ++ E TA A LSRNSSVSSS SGF SAVKRALSMRRSSSVAERY
Sbjct: 61 RLPEEDEEVNDDECDRPRGGTA-AATLSRNSSVSSSVSGFQSAVKRALSMRRSSSVAERY 120
Query: 121 CRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK 173
CRIHDQFATFASPIEDDE+EGGDSKERG+ GGS +KKKKK NAAGKIVRA +
Sbjct: 121 CRIHDQFATFASPIEDDELEGGDSKERGKLGGSAIKKKKKTNAAGKIVRALR 171
BLAST of HG10011701 vs. NCBI nr
Match:
XP_022929198.1 (uncharacterized protein LOC111435863 [Cucurbita moschata] >KAG6577366.1 hypothetical protein SDJN03_24940, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58
Identity = 140/182 (76.92%), Postives = 151/182 (82.97%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPH 60
MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR H
Sbjct: 1 MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QH 60
Query: 61 GCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVA 120
LPEE EEE+E EYGG +A AALSRN+SVSSS SGFHSAVKRALSMRRSSSVA
Sbjct: 61 SRLPEEEEEEEEEEDEYGG--EVSARAAALSRNNSVSSSVSGFHSAVKRALSMRRSSSVA 120
Query: 121 ERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIF 178
ERYCRIHDQFAT ASPI+DDEME GDSKE +TGGSV KKKKKKN+A KIVRACKR+F
Sbjct: 121 ERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLF 176
BLAST of HG10011701 vs. NCBI nr
Match:
KAG7031359.1 (hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 235.7 bits (600), Expect = 3.0e-58
Identity = 136/177 (76.84%), Postives = 147/177 (83.05%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHG 60
MAD YSKI+AACK KSRS+DYSDLSSLPHSLRF AAA SNPNS+DSD NRTNR REPPHG
Sbjct: 1 MADTYSKIEAACKLKSRSVDYSDLSSLPHSLRF-AAADSNPNSRDSDQNRTNRSREPPHG 60
Query: 61 CLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERY 120
CLPE EEEDEY + TAT + L RN SVS+SASGFHSAVKRALSMRRSSSVAERY
Sbjct: 61 CLPE--EEEDEYR----SAATATASTLRRNCSVSASASGFHSAVKRALSMRRSSSVAERY 120
Query: 121 CRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL 178
RIHDQF T ASPI+DDE+EG +SKE GGSV +KKK NAAGKIVRACKR+FGL
Sbjct: 121 SRIHDQFGTLASPIDDDEIEGEESKEGRNAGGSV--RKKKTNAAGKIVRACKRLFGL 168
BLAST of HG10011701 vs. NCBI nr
Match:
KGN56255.1 (hypothetical protein Csa_011668 [Cucumis sativus])
HSP 1 Score: 234.6 bits (597), Expect = 6.7e-58
Identity = 136/178 (76.40%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHG 60
MADGYSKIKAA KFKSRSIDYSDLSSLPHSL F+AA S+P RTNRP+EPPHG
Sbjct: 1 MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAV--------SNPTRTNRPQEPPHG 60
Query: 61 CLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERY 120
LPEE EE ++ E T A L RNSSVSSS SGF SAVKRALSMRRSSSVAERY
Sbjct: 61 RLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERY 120
Query: 121 CRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL 178
CRIHDQFATFASPIEDDEMEGGD KERG+ GGS + KKKKKKNAA KIVRACKRIFGL
Sbjct: 121 CRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 170
BLAST of HG10011701 vs. ExPASy TrEMBL
Match:
A0A5A7V402 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00790 PE=4 SV=1)
HSP 1 Score: 237.7 bits (605), Expect = 3.8e-59
Identity = 136/172 (79.07%), Postives = 145/172 (84.30%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHG 60
MADGYSKIKAACKFKSRSIDYSDLSSLPHSL FN AAVSNP S S+ +RTNRP+EPPH
Sbjct: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLTFNNAAVSNPISHHSNHSRTNRPQEPPHR 60
Query: 61 CLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERY 120
LPEE EE ++ E TA A LSRNSSVSSS SGF SAVKRALSMRRSSSVAERY
Sbjct: 61 RLPEEDEEVNDDECDRPRGGTA-AATLSRNSSVSSSVSGFQSAVKRALSMRRSSSVAERY 120
Query: 121 CRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK 173
CRIHDQFATFASPIEDDE+EGGDSKERG+ GGS +KKKKK NAAGKIVRA +
Sbjct: 121 CRIHDQFATFASPIEDDELEGGDSKERGKLGGSAIKKKKKTNAAGKIVRALR 171
BLAST of HG10011701 vs. ExPASy TrEMBL
Match:
A0A6J1ERE9 (uncharacterized protein LOC111435863 OS=Cucurbita moschata OX=3662 GN=LOC111435863 PE=4 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 1.1e-58
Identity = 140/182 (76.92%), Postives = 151/182 (82.97%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPH 60
MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR H
Sbjct: 1 MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QH 60
Query: 61 GCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVA 120
LPEE EEE+E EYGG +A AALSRN+SVSSS SGFHSAVKRALSMRRSSSVA
Sbjct: 61 SRLPEEEEEEEEEEDEYGG--EVSARAAALSRNNSVSSSVSGFHSAVKRALSMRRSSSVA 120
Query: 121 ERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIF 178
ERYCRIHDQFAT ASPI+DDEME GDSKE +TGGSV KKKKKKN+A KIVRACKR+F
Sbjct: 121 ERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLF 176
BLAST of HG10011701 vs. ExPASy TrEMBL
Match:
A0A0A0L2N9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110030 PE=4 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 3.2e-58
Identity = 136/178 (76.40%), Postives = 143/178 (80.34%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHG 60
MADGYSKIKAA KFKSRSIDYSDLSSLPHSL F+AA S+P RTNRP+EPPHG
Sbjct: 1 MADGYSKIKAASKFKSRSIDYSDLSSLPHSLTFSAAV--------SNPTRTNRPQEPPHG 60
Query: 61 CLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERY 120
LPEE EE ++ E T A L RNSSVSSS SGF SAVKRALSMRRSSSVAERY
Sbjct: 61 RLPEEDEEVNDDECDRPRGATTAAATLCRNSSVSSSVSGFQSAVKRALSMRRSSSVAERY 120
Query: 121 CRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL 178
CRIHDQFATFASPIEDDEMEGGD KERG+ GGS + KKKKKKNAA KIVRACKRIFGL
Sbjct: 121 CRIHDQFATFASPIEDDEMEGGDWKERGKIGGSEIRKKKKKKNAAEKIVRACKRIFGL 170
BLAST of HG10011701 vs. ExPASy TrEMBL
Match:
A0A6J1C4C9 (uncharacterized protein LOC111008371 OS=Momordica charantia OX=3673 GN=LOC111008371 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 134/179 (74.86%), Postives = 145/179 (81.01%), Query Frame = 0
Query: 1 MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNS--QDSDPNRTNRPREPP 60
MADGYSKIKAACKFKSRSIDYSDL+SLPHSL+F AAV NPNS +SD NR NR R
Sbjct: 1 MADGYSKIKAACKFKSRSIDYSDLASLPHSLKF-TAAVPNPNSLAHESDQNRANRAR--A 60
Query: 61 HGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAE 120
CLPE EEEDEY GG VAALSRNSSVSSSASG HSAVKRALSMRRSSSVAE
Sbjct: 61 QSCLPE--EEEDEYGGGGG----VAVAALSRNSSVSSSASGLHSAVKRALSMRRSSSVAE 120
Query: 121 RYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL 178
RYCRIHDQFAT ASPI+D+E+ GDSKE ++ GSV ++KKKNAAGKIVRACKR+FGL
Sbjct: 121 RYCRIHDQFATLASPIDDEEIGAGDSKESRKSAGSV--RRKKKNAAGKIVRACKRLFGL 168
BLAST of HG10011701 vs. ExPASy TrEMBL
Match:
A0A5N6QLE4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004482 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 7.8e-20
Identity = 83/175 (47.43%), Postives = 105/175 (60.00%), Query Frame = 0
Query: 3 DGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCL 62
+GYSK+KA KSRS+D+SD A + S +SDP T++P E G
Sbjct: 2 NGYSKMKAIDTQKSRSMDFSD-----------ALSFSQTKKTNSDP--TSKPHE---GSQ 61
Query: 63 PEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERYCR 122
+E E E GG A LSR+ SVSS+ SGF SAVKRA S++RSSSV+ERYCR
Sbjct: 62 IKESNAEKEDGDGGNGEKFG--AVLSRSCSVSST-SGFQSAVKRAFSVKRSSSVSERYCR 121
Query: 123 IHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL 178
I+DQ T ASPI+DD+ EG D+ R KKKK+ GKI++ACKR+FGL
Sbjct: 122 IYDQSVTLASPIDDDDDEGWDTMRATR-----RSVKKKKHKGGKILKACKRLFGL 152
BLAST of HG10011701 vs. TAIR 10
Match:
AT4G24275.1 (Identified as a screen for stress-responsive genes. )
HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 55/136 (40.44%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 46 SDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVK 105
S + T++ EP H + ++++ D LSRN SVS+SA S +K
Sbjct: 5 SKMDSTDQKLEPDHPVVDPQIQKPD-------LEPAEMKPKLSRNRSVSASAQAVPSPIK 64
Query: 106 RALSMRRSSSVAERYCRIHDQFATFASPI---EDDEMEGGDSKERGRTGGSVMKKKKKKN 165
+SMRRSSSV+ERYCRI+DQ + P+ E DE E D KE+ V KKKK N
Sbjct: 65 --MSMRRSSSVSERYCRIYDQSSATTWPLPFHEGDEDEDDDDKEK------VHKKKKSNN 124
Query: 166 AAGK-IVRACKRIFGL 178
K V+ACKR FG+
Sbjct: 125 FKKKAFVKACKRFFGI 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7015455.1 | 2.7e-59 | 77.47 | hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAA0060595.1 | 7.9e-59 | 79.07 | hypothetical protein E6C27_scaffold22G004710 [Cucumis melo var. makuwa] >TYK0227... | [more] |
XP_022929198.1 | 2.3e-58 | 76.92 | uncharacterized protein LOC111435863 [Cucurbita moschata] >KAG6577366.1 hypothet... | [more] |
KAG7031359.1 | 3.0e-58 | 76.84 | hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KGN56255.1 | 6.7e-58 | 76.40 | hypothetical protein Csa_011668 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V402 | 3.8e-59 | 79.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1ERE9 | 1.1e-58 | 76.92 | uncharacterized protein LOC111435863 OS=Cucurbita moschata OX=3662 GN=LOC1114358... | [more] |
A0A0A0L2N9 | 3.2e-58 | 76.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110030 PE=4 SV=1 | [more] |
A0A6J1C4C9 | 1.7e-54 | 74.86 | uncharacterized protein LOC111008371 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A5N6QLE4 | 7.8e-20 | 47.43 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004482 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G24275.1 | 1.5e-10 | 40.44 | Identified as a screen for stress-responsive genes. | [more] |