HG10011613 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011613
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	(+)-gamma-cadinene synthase-like
Location	Chr01: 8162457 .. 8162976 (+)
RNA-Seq Expression	HG10011613
Synteny	HG10011613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCAGAAGAAATCTCTGACATCAAACTTCGACCTACTGCCAATTATCATCCCAATATTTGGAAGGATTATTCTCTTGCACCAAGTTGTGATGCATTGGTATAATTAAATTATCTTGGTCTATTGTTATATTATATTATGTCATAATGATCATTATTTATGATGTTCTTTAATGTATAAAATGGACCTTTCATATTTTCAGAAAATGGAGGATGAAATGATAGAAGAATTCCAACAGTTGAAAGAAGAAGTGAGGAAGATGCTAATTGCTGTGGTTGAAAAACCTATAGATAAGCTAAAGTTGGTTGATTCAATCCAAAGGTTAGGTGTTTTATACCATTTTGAAAAGGAGATTCATCAAGTTTTGGAAGAAATATATGTGGAGTTTAAGAGTTCATTGAATAATCATAGTGGCGATGAAGATCTTAATACCGTTGCTCTTCTATTTCGTCTACTCAGACGACAAGGTTATAAAATTCCATGTGGTAAGTTCAAAGAAACAACACATAATGACTGA

mRNA sequence

ATGAAGGCAGAAGAAATCTCTGACATCAAACTTCGACCTACTGCCAATTATCATCCCAATATTTGGAAGGATTATTCTCTTGCACCAAGTTGTGATGCATTGAAAATGGAGGATGAAATGATAGAAGAATTCCAACAGTTGAAAGAAGAAGTGAGGAAGATGCTAATTGCTGTGGTTGAAAAACCTATAGATAAGCTAAAGTTGGTTGATTCAATCCAAAGGTTAGGTGTTTTATACCATTTTGAAAAGGAGATTCATCAAGTTTTGGAAGAAATATATGTGGAGTTTAAGAGTTCATTGAATAATCATAGTGGCGATGAAGATCTTAATACCGTTGCTCTTCTATTTCGTCTACTCAGACGACAAGGTTATAAAATTCCATGTGGTAAGTTCAAAGAAACAACACATAATGACTGA

Coding sequence (CDS)

ATGAAGGCAGAAGAAATCTCTGACATCAAACTTCGACCTACTGCCAATTATCATCCCAATATTTGGAAGGATTATTCTCTTGCACCAAGTTGTGATGCATTGAAAATGGAGGATGAAATGATAGAAGAATTCCAACAGTTGAAAGAAGAAGTGAGGAAGATGCTAATTGCTGTGGTTGAAAAACCTATAGATAAGCTAAAGTTGGTTGATTCAATCCAAAGGTTAGGTGTTTTATACCATTTTGAAAAGGAGATTCATCAAGTTTTGGAAGAAATATATGTGGAGTTTAAGAGTTCATTGAATAATCATAGTGGCGATGAAGATCTTAATACCGTTGCTCTTCTATTTCGTCTACTCAGACGACAAGGTTATAAAATTCCATGTGGTAAGTTCAAAGAAACAACACATAATGACTGA

Protein sequence

MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPCGKFKETTHND

Homology

[Close]

BLAST of HG10011613 vs. NCBI nr
Match: XP_022142732.1 ((+)-gamma-cadinene synthase-like [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVE 60
           MKA  +S+ K RP A++HP+IWKD+ LAP  +AL++EDE+ EE +QLKEEVRKMLI VVE
Sbjct: 10  MKAPHVSNTKHRPIASFHPSIWKDHFLAPIYEALEVEDEVKEEREQLKEEVRKMLIVVVE 69

Query: 61  KPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLR 120
            P DKLKLVD IQ+LGV YHFEKEI+QVLE +YV +K+ LN+  GDEDLNTV+LLFR+LR
Sbjct: 70  NPFDKLKLVDWIQKLGVFYHFEKEINQVLEHMYVTYKNFLNDF-GDEDLNTVSLLFRMLR 129

Query: 121 RQGYKIPCGKFKETTHND 139
           +QGY+I C  F +   ND
Sbjct: 130 QQGYRISCDIFSKFMKND 146

[Close]

BLAST of HG10011613 vs. NCBI nr
Match: XP_038905757.1 ((+)-gamma-cadinene synthase-like [Benincasa hispida])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLA-PSCDALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D K R TAN+HPNIW D+ L+  S DALK++D M E+ ++LKEE+R M++  V
Sbjct: 13  MKTNDIPDTK-RSTANFHPNIWTDHFLSFTSDDALKLDDGMKEQVKKLKEEIRMMVVVYV 72

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLL 120
           E P++KLKLVDSIQRLGV YHFE EI Q+LE +YV + S+L N  GDEDL+T+ALLFRLL
Sbjct: 73  ENPLEKLKLVDSIQRLGVSYHFENEIDQILEHLYVSY-STLLNKDGDEDLHTIALLFRLL 132

Query: 121 RRQGYKIPC----------GKFKETTHND 139
           R+QGY+I C          GKFKE+  ND
Sbjct: 133 RQQGYRISCDIFSKFMDNSGKFKESLGND 159

[Close]

BLAST of HG10011613 vs. NCBI nr
Match: XP_038903601.1 ((+)-gamma-cadinene synthase-like [Benincasa hispida])

HSP 1 Score: 146.7 bits (369), Expect = 1.4e-31
Identity = 79/149 (53.02%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MKA +I D K R  AN+HP+IW D+ L+ +  DALK+++EM E+ + LKEE+R M++  V
Sbjct: 1   MKANDIPDTK-RSIANFHPSIWTDHFLSVTFDDALKVDNEMKEQAENLKEEIRMMVVVSV 60

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLL 120
           + P++KLKLVDSIQRLGV YHFE EI Q+LE +Y+ + S+L N   DEDL+ + LLFRLL
Sbjct: 61  KNPLEKLKLVDSIQRLGVSYHFENEIDQILEHLYISY-STLLNKDRDEDLHIIVLLFRLL 120

Query: 121 RRQGYKIPC----------GKFKETTHND 139
           R+QGY+I C          GKFKE+  ND
Sbjct: 121 RQQGYRISCDIFSKFMDNSGKFKESLGND 147

[Close]

BLAST of HG10011613 vs. NCBI nr
Match: XP_023520451.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-29
Identity = 75/137 (54.74%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           RP A YHP+IWKD+ L+ + DAL ++ EM ++ +QLK EV+KML+      ++KL LVDS
Sbjct: 23  RPVAKYHPSIWKDHFLSLTSDALSVDIEMEKQVKQLKVEVKKMLMISNRNLLEKLSLVDS 82

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPC--- 131
           IQRLGV YHFE EI QVLE+IY  ++    +  GDEDL+TV+LLFRLLR+QGYKIPC   
Sbjct: 83  IQRLGVSYHFENEIDQVLEKIYANYR-DFTSIDGDEDLHTVSLLFRLLRQQGYKIPCDIF 142

Query: 132 -------GKFKETTHND 139
                  GKFKE+   D
Sbjct: 143 TKFVESNGKFKESLTED 158

[Close]

BLAST of HG10011613 vs. NCBI nr
Match: NP_001284382.1 ((+)-gamma-cadinene synthase [Cucumis melo] >B2KSJ5.1 RecName: Full=(+)-gamma-cadinene synthase; Short=CmTpsNY; AltName: Full=(+)-delta-cadinene synthase [Cucumis melo] >ABX83200.1 terpene synthase [Cucumis melo])

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-29
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA V
Sbjct: 13  MKTNDIPDVK-RSLANFHPNIWKEHFLSFTFDDALKIDEGMKERTEKLKEEIRMMMIAYV 72

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL---NNHSGDEDLNTVALLF 120
           E  + KL LVDSIQRLGV YHFE E+ + LE IYV + +SL   N +S  EDL+  ALLF
Sbjct: 73  ENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNSLLLSNKNSNGEDLHITALLF 132

Query: 121 RLLRRQGYKIPC----------GKFKETTHND 139
           RLLR+QGY+I C          GKFKE+   D
Sbjct: 133 RLLRQQGYRISCDIFLKFMDDNGKFKESLVED 163

[Close]

BLAST of HG10011613 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA V
Sbjct: 13  MKTNDIPDVK-RSLANFHPNIWKEHFLSFTFDDALKIDEGMKERTEKLKEEIRMMMIAYV 72

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL---NNHSGDEDLNTVALLF 120
           E  + KL LVDSIQRLGV YHFE E+ + LE IYV + +SL   N +S  EDL+  ALLF
Sbjct: 73  ENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNSLLLSNKNSNGEDLHITALLF 132

Query: 121 RLLRRQGYKIPC----------GKFKETTHND 139
           RLLR+QGY+I C          GKFKE+   D
Sbjct: 133 RLLRQQGYRISCDIFLKFMDDNGKFKESLVED 163

[Close]

BLAST of HG10011613 vs. ExPASy Swiss-Prot
Match: U3LVL5 (Germacrene D synthase OS=Lavandula angustifolia OX=39329 GN=GERDS PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 58/139 (41.73%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 10  KLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLV 69
           ++R +A +HP +W DY LA + D  ++     EE  + KE V+K+L      P DK++L+
Sbjct: 19  EIRRSAKFHPTVWGDYFLAYNSDNTEITAAEHEEHAKQKEMVKKLLTLAPNDPTDKMQLI 78

Query: 70  DSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPC- 129
           D+IQRLG+ YHFEKEI ++L+ I+  FK+       D+DL+TVAL FRLLR+ GY + C 
Sbjct: 79  DAIQRLGLQYHFEKEIQEILQSIHANFKA-------DKDLHTVALRFRLLRQHGYNVACD 138

Query: 130 ---------GKFKETTHND 139
                    G F E+  ND
Sbjct: 139 VFNNFLNKEGDFMESITND 150

[Close]

BLAST of HG10011613 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22
Identity = 58/127 (45.67%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           R  AN+HP+IW D+ L+ + +    +D + +  QQLKEEVRKML+A  +    KL L+D+
Sbjct: 22  RRCANFHPSIWGDHFLSYASEFTNTDDHLKQHVQQLKEEVRKMLMAADDDSAQKLLLIDA 81

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPCGKF 131
           IQRLGV YHFE EI +VL+ +   F  S+   S +ED+ T +L FRLLR+QGY + C  F
Sbjct: 82  IQRLGVAYHFESEIDEVLKHM---FDGSV--VSAEEDVYTASLRFRLLRQQGYHVSCDLF 141

Query: 132 KETTHND 139
                N+
Sbjct: 142 NNFKDNE 143

[Close]

BLAST of HG10011613 vs. ExPASy Swiss-Prot
Match: E3W207 (Sesquiterpene synthase OS=Santalum austrocaledonicum OX=293154 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           RP AN+ P+IW D  +  +C+    + +   + ++LKE+VR+ L A V+KP+ +L ++D+
Sbjct: 19  RPIANFPPSIWGDRFINYTCEDENEQAQKERQVEELKEQVRRELAATVDKPLQQLNIIDA 78

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPCGKF 131
            QRLG+ YHFE EI + LE IY+      N   G  DL +VAL FRLLR+ GYK+ C  F
Sbjct: 79  TQRLGIAYHFENEIEESLEHIYLHTYVKNNCFQGSHDLYSVALWFRLLRQDGYKVSCDVF 138

[Close]

BLAST of HG10011613 vs. ExPASy Swiss-Prot
Match: B5A435 (Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           RP AN+ P+IW D  +  +C+    + +   + ++LKE+VR+ L A V+KP+ +L ++D+
Sbjct: 19  RPIANFPPSIWGDRFINYACEDENEQAQKERQVEELKEQVRRELAATVDKPLQQLNIIDA 78

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPCGKF 131
            QRLG+ YHFE EI + LE IY+      N   G  DL +VAL FRLLR+ GYK+ C  F
Sbjct: 79  TQRLGIAYHFENEIEESLEHIYLHTYVENNCFQGSHDLYSVALWFRLLRQDGYKVSCDVF 138

[Close]

BLAST of HG10011613 vs. ExPASy TrEMBL
Match: A0A6J1CNP6 ((+)-gamma-cadinene synthase-like OS=Momordica charantia OX=3673 GN=LOC111012779 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVE 60
           MKA  +S+ K RP A++HP+IWKD+ LAP  +AL++EDE+ EE +QLKEEVRKMLI VVE
Sbjct: 10  MKAPHVSNTKHRPIASFHPSIWKDHFLAPIYEALEVEDEVKEEREQLKEEVRKMLIVVVE 69

Query: 61  KPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLR 120
            P DKLKLVD IQ+LGV YHFEKEI+QVLE +YV +K+ LN+  GDEDLNTV+LLFR+LR
Sbjct: 70  NPFDKLKLVDWIQKLGVFYHFEKEINQVLEHMYVTYKNFLNDF-GDEDLNTVSLLFRMLR 129

Query: 121 RQGYKIPCGKFKETTHND 139
           +QGY+I C  F +   ND
Sbjct: 130 QQGYRISCDIFSKFMKND 146

[Close]

BLAST of HG10011613 vs. ExPASy TrEMBL
Match: A0A1S2X8Q6 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 GN=TPS PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.5e-30
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA V
Sbjct: 13  MKTNDIPDVK-RSLANFHPNIWKEHFLSFTFDDALKIDEGMKERTEKLKEEIRMMMIAYV 72

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL---NNHSGDEDLNTVALLF 120
           E  + KL LVDSIQRLGV YHFE E+ + LE IYV + +SL   N +S  EDL+  ALLF
Sbjct: 73  ENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNSLLLSNKNSNGEDLHITALLF 132

Query: 121 RLLRRQGYKIPC----------GKFKETTHND 139
           RLLR+QGY+I C          GKFKE+   D
Sbjct: 133 RLLRQQGYRISCDIFLKFMDDNGKFKESLVED 163

[Close]

BLAST of HG10011613 vs. ExPASy TrEMBL
Match: A0A1S4DZR2 ((+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-29
Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D+K R  AN+HPNIWK++ L+ +  DALK+++ M E  ++LKEE+R M+IA V
Sbjct: 13  MKTNDIPDVK-RSLANFHPNIWKEHFLSFTFDDALKVDEGMKERTEKLKEEIRMMMIAYV 72

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL---NNHSGDEDLNTVALLF 120
           E  + KL LVDSIQRLGV YHFE EI + LE IYV + +SL   N  S  EDL+  ALLF
Sbjct: 73  ENQLVKLNLVDSIQRLGVSYHFEDEIDEFLEHIYVSYNNSLLLSNKDSEGEDLHITALLF 132

Query: 121 RLLRRQGYKIPC----------GKFKETTHND 139
           RLLR+QGY+I C          GKFKE+   D
Sbjct: 133 RLLRQQGYRISCDIFLKFMDDNGKFKESLVED 163

[Close]

BLAST of HG10011613 vs. ExPASy TrEMBL
Match: A0A6J1EW93 ((+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29
Identity = 74/137 (54.01%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           RP A YHP+IWKD+ L+ + D L ++ EM E+ ++LK EV+KML+      ++KL LVDS
Sbjct: 23  RPVAKYHPSIWKDHFLSLTSDTLSIDVEMEEQAKRLKVEVKKMLMISNRNLLEKLSLVDS 82

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPC--- 131
           IQRLGV YHFE EI QVLE+IY  ++    +  GDEDL TV+LLFRLLR+QGYKIPC   
Sbjct: 83  IQRLGVSYHFENEIDQVLEKIYANYR-DFTSIDGDEDLPTVSLLFRLLRQQGYKIPCDIF 142

Query: 132 -------GKFKETTHND 139
                  GKFKE+   D
Sbjct: 143 TKFVESNGKFKESLAKD 158

[Close]

BLAST of HG10011613 vs. ExPASy TrEMBL
Match: Q66PX8 (Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 3.6e-28
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 1   MKAEEISDIKLRPTANYHPNIWKDYSLAPSC-DALKMEDEMIEEFQQLKEEVRKMLIAVV 60
           MK  +I D K R  AN+HP IWK++ L+ +  DALK++  M E  ++LKEE+R M+IA V
Sbjct: 10  MKTNDIYDTK-RSLANFHPTIWKEHFLSFTFDDALKVDGGMKERIEKLKEEIRMMVIASV 69

Query: 61  EKPIDKLKLVDSIQRLGVLYHFEKEIHQVLEEIYVEFKSSL---NNHSGDEDLNTVALLF 120
           + P+ KL LVDSIQRLGV YHFE EI Q LE +YV + +SL   +N S D+DL+  ALLF
Sbjct: 70  QNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSQDDDLHISALLF 129

Query: 121 RLLRRQGYKIPC----------GKFKETTHND 139
           RLLR+ GY+I C          GKFKE+   D
Sbjct: 130 RLLRQHGYRISCDIFLKFMDNNGKFKESLVED 160

[Close]

BLAST of HG10011613 vs. TAIR 10
Match: AT2G24210.1 (terpene synthase 10 )

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-14
Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           R +ANY P+ W  + L  S +    +D+ + E   LKE+VRKML    +  +D+L+ +D 
Sbjct: 46  RRSANYQPSRWDHHHLL-SVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDD 105

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIP---- 131
           +Q+LGV YHFE EI  +L   Y + ++++     + DL+  AL FRL R+ G+ +     
Sbjct: 106 LQKLGVSYHFEAEIDNILTSSYKKDRTNIQ----ESDLHATALEFRLFRQHGFNVSEDVF 165

[Close]

BLAST of HG10011613 vs. TAIR 10
Match: AT3G25810.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKP-IDKLKLVD 71
           R + NY P+ W D+S   S +   + ++ +     LK++V+KML  V  K  ++KL+L+D
Sbjct: 47  RRSGNYQPSSW-DHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELID 106

Query: 72  SIQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKI 127
            +Q+LGV YHFE+EI+ +L   ++E   ++     +EDL+  AL FRLLR+ G+ +
Sbjct: 107 DLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGV 161

[Close]

BLAST of HG10011613 vs. TAIR 10
Match: AT3G14520.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 40/137 (29.20%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           RP+  + P++W D+ L+ S D  +  DE+  E + +K  V+ ML++      +K++L+  
Sbjct: 63  RPSTYFSPSLWGDHFLSVSLDRGEF-DELEREIETMKPLVKDMLMSSQSSDKEKIRLIHL 122

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPC--- 131
           +  LG  YHF+KEI  +L+  + +    +    G++DL T++++F + R  G+K+ C   
Sbjct: 123 LVSLGSSYHFDKEIQDILKHSFTKLDDII---VGEDDLETISIMFEVFRLYGHKMSCDAF 182

Query: 132 -------GKFKETTHND 139
                  G+FKE+   D
Sbjct: 183 DRFRGEDGRFKESLAKD 195

[Close]

BLAST of HG10011613 vs. TAIR 10
Match: AT1G31950.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.2e-13
Identity = 34/126 (26.98%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 13  PTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDSI 72
           PT ++ P++W D+ L+ S +     DE+  E +  K   R  L++      +K++L+  +
Sbjct: 66  PTPHFSPSLWGDHFLSVSLNRAVEFDELEREIETTKPLARDKLMSSESSDKEKIRLIHLL 125

Query: 73  QRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDEDLNTVALLFRLLRRQGYKIPCGKFK 132
             +G+ YHF+KEI  +L+  + +    +    G++DL T++++F + +  G+K+ C  F 
Sbjct: 126 VSMGISYHFDKEIQDILKHSFTKLDDII---VGEDDLETISIMFEVFKLYGHKMSCDAFD 185

Query: 133 ETTHND 139
               ND
Sbjct: 186 RFRGND 188

[Close]

BLAST of HG10011613 vs. TAIR 10
Match: AT4G16740.1 (terpene synthase 03 )

HSP 1 Score: 71.6 bits (174), Expect = 5.5e-13
Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 12  RPTANYHPNIWKDYSLAPSCDALKMEDEMIEEFQQLKEEVRKMLIAVVEKPIDKLKLVDS 71
           R +ANY P++W+   L    +    ED  +E    LK+EV KML    E  +++L+L+D+
Sbjct: 26  RRSANYQPSLWQHEYLLSLGNTYVKEDN-VERVTLLKQEVSKML-NETEGLLEQLELIDT 85

Query: 72  IQRLGVLYHFEKEIHQVLEEIYVEFKSSLNNHSGDE---DLNTVALLFRLLRRQGYKI 127
           +QRLGV YHFE+EI + L  ++V+   +  N        DL   AL FRLLR+ G+ I
Sbjct: 86  LQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRNRWGDLYATALEFRLLRQHGFSI 141

The following BLAST results are available for this feature:

BLAST of HG10011613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142732.1	1.3e-40	64.49	(+)-gamma-cadinene synthase-like [Momordica charantia]	[more]
XP_038905757.1	1.6e-35	57.72	(+)-gamma-cadinene synthase-like [Benincasa hispida]	[more]
XP_038903601.1	1.4e-31	53.02	(+)-gamma-cadinene synthase-like [Benincasa hispida]	[more]
XP_023520451.1	1.0e-29	54.74	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pep...	[more]
NP_001284382.1	1.8e-29	51.97	(+)-gamma-cadinene synthase [Cucumis melo] >B2KSJ5.1 RecName: Full=(+)-gamma-cad...	[more]

BLAST of HG10011613 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	2.3e-32	51.97	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
U3LVL5	4.3e-23	41.73	Germacrene D synthase OS=Lavandula angustifolia OX=39329 GN=GERDS PE=1 SV=1	[more]
Q6Q3H3	1.3e-22	45.67	(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S...	[more]
E3W207	1.7e-22	43.33	Sesquiterpene synthase OS=Santalum austrocaledonicum OX=293154 PE=2 SV=1	[more]
B5A435	1.7e-22	43.33	Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1	[more]

BLAST of HG10011613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNP6	6.3e-41	64.49	(+)-gamma-cadinene synthase-like OS=Momordica charantia OX=3673 GN=LOC111012779 ...	[more]
A0A1S2X8Q6	8.5e-30	51.97	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 GN=TPS PE=4 SV=1	[more]
A0A1S4DZR2	1.9e-29	52.63	(+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV...	[more]
A0A6J1EW93	4.2e-29	54.01	(+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 P...	[more]
Q66PX8	3.6e-28	51.32	Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of HG10011613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24210.1	2.9e-14	35.38	terpene synthase 10	[more]
AT3G25810.1	3.8e-14	37.07	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT3G14520.1	1.1e-13	29.20	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT1G31950.1	4.2e-13	26.98	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G16740.1	5.5e-13	38.98	terpene synthase 03	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PANTHER	PTHR31225	OS04G0344100 PROTEIN-RELATED	coord: 9..132
None	No IPR available	PANTHER	PTHR31225:SF111	TERPENE SYNTHASE 2-RELATED	coord: 9..132
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 19..59 e-value: 2.0E-31 score: 110.9
IPR001906	Terpene synthase, N-terminal domain	PFAM	PF01397	Terpene_synth	coord: 32..135 e-value: 2.1E-29 score: 102.6
IPR036965	Terpene synthase, N-terminal domain superfamily	GENE3D	1.50.10.130		coord: 60..135 e-value: 2.0E-31 score: 110.9
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 18..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011613.1	HG10011613.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010334	sesquiterpene synthase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity