
HG10011343 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGAATTTGCAAGTAACAATTCTGAGGGATCATTCAATTCTATGGTTATTCGCGTCCTATCCCACAGCGGCGAGGGACTTGTATCCAACATTCTGTATGCTTTGCTTGGTGTTTCAGCAATGTCACGGGTAAGCTTCTAATTAAAGTAAATACATAAAAGCGTGTTCAAATTCTTTCCTTTTTTTTTTCTTTCCACTTGCAAGTACCCTTGTAACCATATATGGCCAAAATAAAATATGTATCTATGTGTACCTTGCATGAGTAGTTTGGCACTGCGAACAGAAAAAAAGAGTCCAACTAGTATAAATTTGGGTTAGGCTATAATTACAAAAGAATTTAGAAGTAGAGGACCAAATAGAAGCAAAAAGAATAACCAAACTCCAAAAAAAGTCACTGTAAGTTTCTTTATCATGAAAGATTCTAGAGTTTCTTTCAAACAACACCCTCCAAAGGAGGGCGAAGATCCCATTGAACCAAAGGATTTTTGCCTGAGCATTTAAATGAGGACCTTCAACTAATTGTAGAAGAGCATCTGAAGCTTTCTTGGGCCAACACCACTATATTTTGAACAAGGTAAATAGTCTTCCCCAACCATCAGCAGCAAAGGGACAAAAGAAAAAAGGTGCATCAAAGACTCCCTACTATTTTTACAAAGAATACACCAATTTAGGAGAGGGCACACTTACGAAGAATTCTCTGAATTCTACTGCAGATGTTTAGTCTTTCAAAAGAGAAGATCCACAAGAAAACCTTGGCTTTCTTAGGACAAAAGGCCTTCTAAATAAGATCAAATTTTTGTCTTTCCAAAGCTTTATGTTTCACAATGTGTTTGGGAGAGAGAGCTTTAACCGAAAAGGAGCCATCTTTTCCAACAACCACACAAACACATCATTCCTGTTGTTCAGTCTAAAAAGTGTTGATGTCTGATATTTTATATATATATATTTATATATATATAGAAAGAAATACGAAGTTTAGCAATTCTAAGACGACTATGGAAGCCTGCTATTTCATATAGGTGTAAGATCCCGAGATTTGAGCACTTGAAACAATGAAAACGTTGGTGCATGATGTTAATGAATCGTGTGGGCTGTTCTTGTTTGTGAACTTCGTTGTCATCTTCTTCTTTATTCTATATAAGTGGTGCCTGCTTGTAAATGAAGATGATCTTTTGCTATTTCATACTTTGGGTTGTCATCTCTTAGTTTTTCTTTCATCATATTCTTCTTGGAGTTAGATAGCAAAACATTTTTGGGGAGTTTGTACGGATGACCTTTTTTCAGGGGTCCAAATGAAAAATATCCCAAGATTAAAAAACACTCGGAAAATGGCTCTTTGCTAATGTCAACCACGCGTGAAAGTACCAATTTGTCCTCAAAACACGTGCGAGGGATTGACGCTCCCATGAATCACGTTTCTCCCTCTCACACCTCATTCCTTCCTCTCGTTTCTTCCTGCTAATGTCAACACGCGTGAAAGTACAATTTGTCCTCAAAACACGTGCGAGGGATTGACGCTCCCATGAATCACGTTTCTCCCTCTCACACCTCATTCCTTCCTCTCGTTTCTTCCTCTCATTCCTCATCAGACACAACTACAATTTTTTTCTTTGATTTTTTCCCTTTGTTCAAATTCTTCCTCTTACTTATTCCTCTAGCTTCTTCTTCTCGCTTCTTCCTCTCACTCCTTCGTTTGGCATTTTCTAGGTAAGTTTTTTTTTTTCATTTTCATTTCCCTTCTCCACTTTCCTTCTCCATTTTCCTCCACGGTCACTGCAATTTTGATCCTTGATTTTTTTCCTACCAACTTTGGTGCCGACCAAACCCTTCGCCATTGTCTCTTCTCTCTCTCCCCCTGAATCCAGCCAATCTCTTCCTCTGCAACCGCCTAGGCGATTGAAAAATCAAAGCCTATGTCCTCAATCAGAGATCTCGTCGACAGCTCCCTCCGAGTGAGAGAAATCCAACACAAAATATATAAGGTTTTTTCGGTCTAATGAGGAACGAGAGAAAGAAGCGAGAGAAAGGAACGAGATTAAATGAGAGTGTCAGGCCCTCACATGCGTTCTGGGACAAATCGGTACTTTCACATGCAGCTGACGTAAGCAGAAGGTCAATTTTCAAATATTTTTTAACCTTGGATATTTTTTTATTTGACCCGTAGAAAAGGGCCATTCGTGCAAATTTCCCAACATTTTTTATAACTGCTCATTATGTTCCATAAGCTCTTGGAGCCCTTCTGTAGTTTTGTTGGGATTCTTTCATTCTTCTTTTGGTAAATTTCGCACATGAATGATATTGTTTCTCGTTTAATTGAATATTTGCAAGGCGTGCGGTGAAGTTAACACGGAACCTCTTATTCAGGTTCACAAGTGTGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACGGCAACAATTCTGCAACAGTTGGCAGCAATTTGCAGTGTCAGTGAAAGAACGGACTTGAAACCTGTCCTGCGCTGGGAATCTTTGCATGGCTGGCTACTATCAGCGGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTATATATATATATATATGTCAGTTTGTAATTAGTGACTTTGTATAATGGTTATAAATGAAAAGGAAGATGATTTTTCTATGGGTCACTGTACTATAATTTACTTTCTTAGCGTTTTAATAATTTGAAAGCAGATTAAAGACAAAATGCATGTACTAAAAAATAATCGTTTTAACTATATTTCTGAAAAAGAATACAAACAAATGAATCCTGCGTTACTTTCTGATAGAGACTAATGTACCTCTGGTACCATGAGCTGGTAGGATATATTTGCTGTATTTGGAAAAGTAAATCTTAATAGATAATAATATAACAACAGGGGTTATTACTTAAAACGATGTTATTAATTTAGATGAAATTAAATATGTTTTTATTCACCTAATTGAGTAAGAAATACATAACTCTTTTATATACGAGAAAGGCCCCACACGAGAAAGGAAAAAAAAATAGGAGTAAAATAATCTATTGATGATTACACCTCATCTAATTACAATGTTTACAATCAATATAAACTAACACTCCCCTCTAATTAGACTTCAGAGGAAGTTTCCTCATTGCACTCTTTCCCTTCCATCTGCTGCCTCTGCTTTAGAGATATGGAATTCCTGGACCACATTTTCTTCCACTTCTGTTCTCCCAAAAAGTTTGGAGCTTTATTTCAATCAGCTGAACTTGCCTTTCTCTCTCCCAGATGATGTGGTTGATTGTTTATAGAAGGTCTGACTTTTGAAGGAAAAGCTAAAATCCTTTGGAATTGCACTATCCGGCTACTCTTTGGCTTATTTGGAAAGAGCAAAATCAGATAATTTGTTCTATCATGTAGAATTGAATTATGAACAGTGGCAGCCTTATTGTCACAATAAATCTGTATAGACTTACTTTGGGTAAACTTCAATTCTTCAAGTATCTTTTTGATCCATATGTCTTCAAAAAAATTTCTGGTTAATGCTCTAAACTCTGCATTTTTGTTTTTTGGTAGCCTTAGATTGAAGAGTTCGTCCGTTCGATGAATAGGTCCAAAAAACAGGTTAAGTCTTTCACCATTTATTCAAGAAAAAGCATGTGGACACCTAAAATAATACCCTGCCACCAAGAAGAAAGAATAAGGACACCGTAAGAATAGGATGGTCAGCATCTTCATAACTAACTAGTTTTCACATCCGTGGCTGCTGTTCTATACATGAATTGAAATCATGACTCAATTTAATATTCATATGCAAACAGACATTTTAACTTTGCCATTTTGATTATTAAAGGTGTAGGCTTTTTTCCAGGTGCAGGCTCTCCCACTTGAGTATTTAAAACCAGGGGAAGTAGAAACTCTTGTGCCACTATGGTTAAAGGCTTTTGGAGATGCAGCCTGTGACTACCTTGAAAGTAAAAGTTGTGATGAAGACAATACTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTTCGTGAATTTGCTGATGGTCACCGCAATATTCCAAATGTGACTTAA ATGTTAGAATTTGCAAGTAACAATTCTGAGGGATCATTCAATTCTATGGTTATTCGCGTCCTATCCCACAGCGGCGAGGGACTTGTATCCAACATTCTGTATGCTTTGCTTGGTGTTTCAGCAATGTCACGGGTGCAGGCTCTCCCACTTGAGTATTTAAAACCAGGGGAAGTAGAAACTCTTGTGCCACTATGGTTAAAGGCTTTTGGAGATGCAGCCTGTGACTACCTTGAAAGTAAAAGTTGTGATGAAGACAATACTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTTCGTGAATTTGCTGATGGTCACCGCAATATTCCAAATGTGACTTAA ATGTTAGAATTTGCAAGTAACAATTCTGAGGGATCATTCAATTCTATGGTTATTCGCGTCCTATCCCACAGCGGCGAGGGACTTGTATCCAACATTCTGTATGCTTTGCTTGGTGTTTCAGCAATGTCACGGGTGCAGGCTCTCCCACTTGAGTATTTAAAACCAGGGGAAGTAGAAACTCTTGTGCCACTATGGTTAAAGGCTTTTGGAGATGCAGCCTGTGACTACCTTGAAAGTAAAAGTTGTGATGAAGACAATACTAATTATGGACATATGCAAGGGAAGGGTGGAAGAGTCCTGAAGCGTCTAGTTCGTGAATTTGCTGATGGTCACCGCAATATTCCAAATGTGACTTAA MLEFASNNSEGSFNSMVIRVLSHSGEGLVSNILYALLGVSAMSRVQALPLEYLKPGEVETLVPLWLKAFGDAACDYLESKSCDEDNTNYGHMQGKGGRVLKRLVREFADGHRNIPNVT Homology
BLAST of HG10011343 vs. NCBI nr
Match: XP_038891351.1 (transportin-3 [Benincasa hispida] >XP_038891359.1 transportin-3 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 2.9e-49 Identity = 113/157 (71.97%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. NCBI nr
Match: XP_008449960.1 (PREDICTED: transportin-3 isoform X2 [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. NCBI nr
Match: XP_008449959.1 (PREDICTED: transportin-3 isoform X1 [Cucumis melo] >XP_016900839.1 PREDICTED: transportin-3 isoform X1 [Cucumis melo] >XP_016900840.1 PREDICTED: transportin-3 isoform X1 [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. NCBI nr
Match: KAA0048527.1 (transportin-3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. NCBI nr
Match: XP_022983999.1 (transportin-3 isoform X1 [Cucurbita maxima] >XP_022984001.1 transportin-3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 201.4 bits (511), Expect = 4.2e-48 Identity = 111/156 (71.15%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of HG10011343 vs. ExPASy TrEMBL
Match: A0A1S3BN70 (transportin-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491690 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. ExPASy TrEMBL
Match: A0A5A7U2P7 (Transportin-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001490 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. ExPASy TrEMBL
Match: A0A1S3BNV6 (transportin-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491690 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 111/157 (70.70%), Postives = 113/157 (71.97%), Query Frame = 0
BLAST of HG10011343 vs. ExPASy TrEMBL
Match: A0A6J1J969 (transportin-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482450 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48 Identity = 111/156 (71.15%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of HG10011343 vs. ExPASy TrEMBL
Match: A0A6J1F1T5 (transportin-3 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441617 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48 Identity = 111/156 (71.15%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of HG10011343 vs. TAIR 10
Match: AT1G12930.1 (ARM repeat superfamily protein ) HSP 1 Score: 124.4 bits (311), Expect = 6.1e-29 Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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