HG10011319 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011319
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein rough sheath 2 homolog
Location	Chr01: 4765110 .. 4766264 (-)
RNA-Seq Expression	HG10011319
Synteny	HG10011319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTTCGAGCCTATGTCAAGCAATATGGCCCCAAAGAATGGAATCTCATCTCTCAGCGTATGGCTAACCCTCTCCATCGCGATCCTAAATCCTGCCTTGAGCGCTGGAAGAATTATCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAGGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGTAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAGCAGTTACAGAAGGCGCACAACTTAACTCAGAGGCGGGATTATCAAACCTCCGCCGACGGGAATATTCCCATTGCTGCTGGTGTTTCCTCCCCGGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTGGAGACCTTTGCTGAGAAATACGTTCAGCCCAAGCTTTACGCTGCTGCGTTTCAATCTCATCCTCCTCCGCCTCCGTCGCCCTTGGCCAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGGTCCTTTCCCTTGGATCCGTCAGCTCTACCACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACGTTAACTCCACCAGCACCGCTTCCTCTTCCACTTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGTTATCTCCCTCTGAACCAGCCTCTCTCGACTCGGAAGTGAACCGGATCGGAGCCCTAGTCCAGTACTGCAAGGAGCTGGAAGAAGGGCGGCAGAGTTGGGTTCAGCACAAGAAGGAAGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAAGAGATGGAAGCGAAAATACAGAGGTTAAGAGAGGAAGAAAGAGCATATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAAAGAGATGCAGATTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAGCATACGAAATTAGCGAAGCTTGTGGAGAAAATTGGAGGTCAGCTGGGACATGGGTTGGTGGTTGTTGGTGCTGGTAATTCGAAGGATATTGTCCATTGA

mRNA sequence

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTTCGAGCCTATGTCAAGCAATATGGCCCCAAAGAATGGAATCTCATCTCTCAGCGTATGGCTAACCCTCTCCATCGCGATCCTAAATCCTGCCTTGAGCGCTGGAAGAATTATCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAGGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGTAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAGCAGTTACAGAAGGCGCACAACTTAACTCAGAGGCGGGATTATCAAACCTCCGCCGACGGGAATATTCCCATTGCTGCTGGTGTTTCCTCCCCGGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTGGAGACCTTTGCTGAGAAATACGTTCAGCCCAAGCTTTACGCTGCTGCGTTTCAATCTCATCCTCCTCCGCCTCCGTCGCCCTTGGCCAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGGTCCTTTCCCTTGGATCCGTCAGCTCTACCACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACGTTAACTCCACCAGCACCGCTTCCTCTTCCACTTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGTTATCTCCCTCTGAACCAGCCTCTCTCGACTCGGAAGTGAACCGGATCGGAGCCCTAGTCCAGTACTGCAAGGAGCTGGAAGAAGGGCGGCAGAGTTGGGTTCAGCACAAGAAGGAAGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAAGAGATGGAAGCGAAAATACAGAGGTTAAGAGAGGAAGAAAGAGCATATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAAAGAGATGCAGATTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAGCATACGAAATTAGCGAAGCTTGTGGAGAAAATTGGAGGTCAGCTGGGACATGGGTTGGTGGTTGTTGGTGCTGGTAATTCGAAGGATATTGTCCATTGA

Coding sequence (CDS)

ATGAAGGACCGCCAGCGCTGGCAGCCTGAAGAAGACGCCCTCCTTCGAGCCTATGTCAAGCAATATGGCCCCAAAGAATGGAATCTCATCTCTCAGCGTATGGCTAACCCTCTCCATCGCGATCCTAAATCCTGCCTTGAGCGCTGGAAGAATTATCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAGGAGCAGTCTCTTGTTATCTCTCTTCAGGCTAAGTACGGTAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAGCAGTTACAGAAGGCGCACAACTTAACTCAGAGGCGGGATTATCAAACCTCCGCCGACGGGAATATTCCCATTGCTGCTGGTGTTTCCTCCCCGGAGAAGGCGCTTCAAGGTCCTTACGACCATATCTTGGAGACCTTTGCTGAGAAATACGTTCAGCCCAAGCTTTACGCTGCTGCGTTTCAATCTCATCCTCCTCCGCCTCCGTCGCCCTTGGCCAACGTCATGCCTCGTCTTCCCATCCCTGACGCCGATCCGGTCCTTTCCCTTGGATCCGTCAGCTCTACCACGTCGTCTTCCACTGTTCTTCCTCTCTGGATGAACGTTAACTCCACCAGCACCGCTTCCTCTTCCACTTCCTCAACCACGCCGTCGCCGTCGGTGAGCCTCACGTTATCTCCCTCTGAACCAGCCTCTCTCGACTCGGAAGTGAACCGGATCGGAGCCCTAGTCCAGTACTGCAAGGAGCTGGAAGAAGGGCGGCAGAGTTGGGTTCAGCACAAGAAGGAAGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCAGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAAGAGATGGAAGCGAAAATACAGAGGTTAAGAGAGGAAGAAAGAGCATATTTAGGGCGAATCGAGAGCGATTACAGAGAACAGTTGAATGCTCTGCAAAGAGATGCAGATTGTAAAGAGGCGAAGCTGATGGAAGCTTGGTGCAGCAAGCATACGAAATTAGCGAAGCTTGTGGAGAAAATTGGAGGTCAGCTGGGACATGGGTTGGTGGTTGTTGGTGCTGGTAATTCGAAGGATATTGTCCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQRRDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPLANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHTKLAKLVEKIGGQLGHGLVVVGAGNSKDIVH

Homology

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BLAST of HG10011319 vs. NCBI nr
Match: XP_038907190.1 (protein rough sheath 2 homolog [Benincasa hispida])

HSP 1 Score: 686.0 bits (1769), Expect = 1.8e-193
Identity = 371/391 (94.88%), Postives = 373/391 (95.40%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM NPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQLQKA NLTQR
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLQKAQNLTQR 120

Query: 121 RDYQTSA-DGN-IPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLY----AAAFQS-HP 180
           RDYQTSA DGN IPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLY    AAAFQS HP
Sbjct: 121 RDYQTSAVDGNIIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAATAAAFQSPHP 180

Query: 181 PPPPSPLANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPS 240
           PPPPSPLANVMPRLPIPDADPVLSLGSVSSTTS+STVLPLWMNVNSTSTASSSTSSTTPS
Sbjct: 181 PPPPSPLANVMPRLPIPDADPVLSLGSVSSTTSTSTVLPLWMNVNSTSTASSSTSSTTPS 240

Query: 241 PSVSLTLSPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESE 300
           PSVSLTLSPSEPASLD EVNRIGALVQYCKE+EEGRQSWVQHKKEATWRLNRLEQQLESE
Sbjct: 241 PSVSLTLSPSEPASLDLEVNRIGALVQYCKEMEEGRQSWVQHKKEATWRLNRLEQQLESE 300

Query: 301 KARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKH 360
           KARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKH
Sbjct: 301 KARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKH 360

Query: 361 TKLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
            KL KLVEKIG Q GHGLVVV A NSKDI H
Sbjct: 361 AKLTKLVEKIGVQ-GHGLVVVSA-NSKDIGH 389

[Close]

BLAST of HG10011319 vs. NCBI nr
Match: XP_023525837.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.0 bits (1665), Expect = 2.1e-181
Identity = 344/390 (88.21%), Postives = 364/390 (93.33%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLS EEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSAEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+AAFQS PPPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS-PPPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADPVLSLGSV+STTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQSW+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQSWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVVAAGNSKDMIH 386

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BLAST of HG10011319 vs. NCBI nr
Match: KAG7036747.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.0 bits (1660), Expect = 8.0e-181
Identity = 343/390 (87.95%), Postives = 363/390 (93.08%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+AAFQS  PPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS--PPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADPVLSLGSV+STTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVVAAGNSKDMIH 385

[Close]

BLAST of HG10011319 vs. NCBI nr
Match: XP_022949284.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 639.4 bits (1648), Expect = 2.0e-179
Identity = 341/390 (87.44%), Postives = 362/390 (92.82%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+AAFQS  PPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS--PPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADPVLSLGSV+STTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQ W+QHKKEATWRL RLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVVAAGNSKDMIH 385

[Close]

BLAST of HG10011319 vs. NCBI nr
Match: XP_022997764.1 (protein rough sheath 2 homolog [Cucurbita maxima])

HSP 1 Score: 635.2 bits (1637), Expect = 3.7e-178
Identity = 340/390 (87.18%), Postives = 361/390 (92.56%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+ AFQS  PPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQS--PPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           AN+MPRLP+PDADPVLSLGSV+STTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVV-AGNSKDMIH 384

[Close]

BLAST of HG10011319 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.5e-76
Identity = 171/368 (46.47%), Postives = 233/368 (63.32%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+SQRM  PLHRD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+       R
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRD----RDR 125

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           R      DG+    AG         G YD +LE FA+K V           H     +P 
Sbjct: 126 RRLPPPLDGDERGCAG---------GRYDWLLEDFADKLVN--------DHHRRMMAAP- 185

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
                                        +LP WM  +S+ ++SSS S T    S ++  
Sbjct: 186 -----------------------------ILPPWM--SSSPSSSSSPSVTLSLASAAVAP 245

Query: 241 SPSEPASL-----DSEVNRIGALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEKA 300
           +P+ P          EV  +  L++ C+E+EEG+++W  H+KEA WR+ R+E QLE+E+A
Sbjct: 246 APAAPPPTWGGGGGGEV-VVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERA 305

Query: 301 RKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHTK 360
            ++RE  EE EAK++ LREE+ A + R+E++YRE++  L+RDA+ KE K+ E W +KH +
Sbjct: 306 CRRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHAR 319

Query: 361 LAKLVEKI 364
           LAK ++++
Sbjct: 366 LAKFLDQV 319

[Close]

BLAST of HG10011319 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.2e-76
Identity = 182/384 (47.40%), Postives = 237/384 (61.72%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+SQRM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+        
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR-------- 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYV--QPKLYAAA----FQSHPP 180
                  D   P       P    +G Y+ +LE FAEK V  +P+  AAA      + P 
Sbjct: 121 -------DSRRP----PPEPSPDERGRYEWLLENFAEKLVGERPQQAAAAPSPLLMAAPV 180

Query: 181 PPP-------------SPLANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTS 240
            PP             + +A+  PR P P     LSL S +         P WM      
Sbjct: 181 LPPWLSSNAGPAAAAAAAVAHPPPRPPSPSV--TLSLASAAVAPGPPAPAP-WM---PDR 240

Query: 241 TASSSTSSTTPSPSVSLTLSPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQHKKEATW 300
            A+ +     PSPS     +P   A +D +   +  L + C+ELEEGR++W  H++EA W
Sbjct: 241 AAADAAPYGFPSPSQHGGAAPPGMAVVDGQA--LAELAECCRELEEGRRAWAAHRREAAW 300

Query: 301 RLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCK 360
           RL R+EQQLE E+  ++RE  EE EAK++ +R E+ A   R+E D+RE++  L+RDA  K
Sbjct: 301 RLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVK 357

Query: 361 EAKLMEAWCSKHTKLAKLVEKIGG 366
           E K+ E W +KH ++AK VE++GG
Sbjct: 361 EEKMAEQWAAKHARVAKFVEQMGG 357

[Close]

BLAST of HG10011319 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-75
Identity = 182/387 (47.03%), Postives = 236/387 (60.98%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ ++++   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQ------PKLYAAAF----- 180
            D                      +  YD ILE+FAEK V+      P   AAA      
Sbjct: 121 ID----------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMAN 180

Query: 181 ----------QSHPPPPPSP--LANVMPRLPIPDADPVLSLGSVSSTTSSSTVLP--LWM 240
                     Q  PP P  P  LA       +    P ++L    ST +++   P   W+
Sbjct: 181 SNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 NVNSTSTASSSTSSTTPSPSVSLTLSPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQH 300
                  A +      P   V  ++ PS   S  SE   +  LV+ C+ELEEG ++W  H
Sbjct: 241 QQQQPERAENG-----PGGLVLGSMMPS--CSGSSESVFLSELVECCRELEEGHRAWADH 300

Query: 301 KKEATWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQ 360
           KKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE++  + +IE +YREQL  L+
Sbjct: 301 KKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLR 358

Query: 361 RDADCKEAKLMEAWCSKHTKLAKLVEK 363
           RDA+ K+ KL + W S+H +L K +E+
Sbjct: 361 RDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of HG10011319 vs. ExPASy Swiss-Prot
Match: B3VTV7 (Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.6e-20
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  +       L R  KSC  RW NYL+PG+K+G+ +P E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRSVPTNTG--LLRCSKSCRLRWTNYLRPGIKRGNFTPHE 76

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQRRDYQTS 126
           + ++I LQA  GNKW  IA+ +P RT   +  +W    +K++K+ Q A +     D  TS
Sbjct: 77  EGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKIKKFQSALSPHMASDSTTS 136

Query: 127 ADGN 131
              N
Sbjct: 137 TCTN 138

[Close]

BLAST of HG10011319 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.6e-19
Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS+R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of HG10011319 vs. ExPASy TrEMBL
Match: A0A6J1GCE3 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.5e-180
Identity = 341/390 (87.44%), Postives = 362/390 (92.82%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+AAFQS  PPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQS--PPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           ANVMPRLP+PDADPVLSLGSV+STTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANVMPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQ W+QHKKEATWRL RLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVVAAGNSKDMIH 385

[Close]

BLAST of HG10011319 vs. ExPASy TrEMBL
Match: A0A6J1KCH4 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.8e-178
Identity = 340/390 (87.18%), Postives = 361/390 (92.56%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQKA NLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGN+ I +GVSSPEKALQGPYDHILETFAEKYVQPKLY+ AFQS  PPPP PL
Sbjct: 121 RDYQNS-DGNLSI-SGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQS--PPPPPPL 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
           AN+MPRLP+PDADPVLSLGSV+STTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTL
Sbjct: 181 ANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEP  LDSE+NR+      GALV YCKELEEGRQ W+QHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKI+RLREEE AYLGRIESDYREQ++A++RDA+ KEAKL+EAWCSKHT
Sbjct: 301 ARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHT 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KL KLVE+IG Q G GLVVV AGNSKD++H
Sbjct: 361 KLTKLVEQIGNQ-GQGLVVV-AGNSKDMIH 384

[Close]

BLAST of HG10011319 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 8.3e-176
Identity = 339/390 (86.92%), Postives = 353/390 (90.51%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQK  NLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
            DYQ S DGNIPI  GVSSPEKA+QGPYDHILETFAEKYVQPK+YAAAFQS PPPPP   
Sbjct: 121 HDYQNS-DGNIPI-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPPP-- 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
               PRL +P+ADPVLSLGSVSSTTSS TVLPLWMN NSTSTASSST STTPSPSVSLTL
Sbjct: 181 ----PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNANSTSTASSSTVSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEPA  ++EVNRI      GALVQYCK+LEEGRQSWVQHKKEATWRLNRLE+QLESEK
Sbjct: 241 SPSEPAINETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKIQRLREEE AYLGRIESDYREQL+ALQRDAD KEAKL+E+WCSKH 
Sbjct: 301 ARKKREKMEEMEAKIQRLREEESAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHA 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KLAKLVEK G Q GHGLV+V  GNSKDIVH
Sbjct: 361 KLAKLVEKYGVQ-GHGLVMV-TGNSKDIVH 380

[Close]

BLAST of HG10011319 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 4.1e-175
Identity = 337/390 (86.41%), Postives = 353/390 (90.51%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRM  PLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVF+EKQLKQLQK  NLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
           RDYQ S DGNIP+  GVSSPEKA+QGPYDHILETFAEKYVQPK+YAAAFQS PPP     
Sbjct: 121 RDYQNS-DGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPP----- 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
               PRL +P+ADPVLSLGSVSSTTSS TVLPLWMNVNSTSTASSST+STTPSPSVSLTL
Sbjct: 181 ----PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRI------GALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEK 300
           SPSEPA L+SEVNRI      GALVQYCK+LEEGRQ+WVQHKKEATWRLNRLEQQLESEK
Sbjct: 241 SPSEPAILESEVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEK 300

Query: 301 ARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHT 360
           ARKKREKMEEMEAKIQRLREEE AYLGRIESDYREQL+ALQRDAD KEAKL+E+WCSKH 
Sbjct: 301 ARKKREKMEEMEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHA 360

Query: 361 KLAKLVEKIGGQLGHGLVVVGAGNSKDIVH 385
           KLAKLVEK G Q GHGLV+V  GNS DIVH
Sbjct: 361 KLAKLVEKYGVQ-GHGLVMV-TGNSNDIVH 377

[Close]

BLAST of HG10011319 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 8.6e-165
Identity = 318/384 (82.81%), Postives = 335/384 (87.24%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM NPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQL KA+NLT  
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLT-- 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQPKLYAAAFQSHPPPPPSPL 180
              Q+S D N+PI+  VSSPEKALQGPYDHILETFAEKYVQPKLY      HP       
Sbjct: 121 ---QSSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY-----PHP------- 180

Query: 181 ANVMPRLPIPDADPVLSLGSVSSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTL 240
                 +PIPDADP+LSLGSV+STTSSST+LPLWMNVNSTSTASSST STTPSPSVSLTL
Sbjct: 181 ------IPIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTL 240

Query: 241 SPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQHKKEATWRLNRLEQQLESEKARKKRE 300
           SPSEP  L+SEVNRIGALVQYCKE+EEGRQSWVQHKKEA+WRLNRLEQQLESEKARKKRE
Sbjct: 241 SPSEPGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKRE 300

Query: 301 KMEEMEAKIQRLREEERAYLGRIESDYREQLNALQRDADCKEAKLMEAWCSKHTKLAKLV 360
           KMEEMEAKIQRLREEER YLG IE DY+EQLNALQR+ADCKEAKL+E WC+KH+KL KLV
Sbjct: 301 KMEEMEAKIQRLREEERVYLGGIERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLV 354

Query: 361 EKIGGQLGHGLVVVGAGNSKDIVH 385
           EK G   GHGL+    G SKDIVH
Sbjct: 361 EKFG---GHGLL----GVSKDIVH 354

[Close]

BLAST of HG10011319 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 285.0 bits (728), Expect = 8.7e-77
Identity = 182/387 (47.03%), Postives = 236/387 (60.98%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKAHNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ ++++   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQTSADGNIPIAAGVSSPEKALQGPYDHILETFAEKYVQ------PKLYAAAF----- 180
            D                      +  YD ILE+FAEK V+      P   AAA      
Sbjct: 121 ID----------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMAN 180

Query: 181 ----------QSHPPPPPSP--LANVMPRLPIPDADPVLSLGSVSSTTSSSTVLP--LWM 240
                     Q  PP P  P  LA       +    P ++L    ST +++   P   W+
Sbjct: 181 SNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPIPWL 240

Query: 241 NVNSTSTASSSTSSTTPSPSVSLTLSPSEPASLDSEVNRIGALVQYCKELEEGRQSWVQH 300
                  A +      P   V  ++ PS   S  SE   +  LV+ C+ELEEG ++W  H
Sbjct: 241 QQQQPERAENG-----PGGLVLGSMMPS--CSGSSESVFLSELVECCRELEEGHRAWADH 300

Query: 301 KKEATWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERAYLGRIESDYREQLNALQ 360
           KKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE++  + +IE +YREQL  L+
Sbjct: 301 KKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLR 358

Query: 361 RDADCKEAKLMEAWCSKHTKLAKLVEK 363
           RDA+ K+ KL + W S+H +L K +E+
Sbjct: 361 RDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of HG10011319 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 99.8 bits (247), Expect = 5.2e-21
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL+++  ++ L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLAK--SSGLKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQL 112
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ +QL
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQL 125

[Close]

BLAST of HG10011319 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS+R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of HG10011319 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  +ED LL  +V  +G + W+ I++   + L+R  KSC  RW NYL PGLK+G ++P+E
Sbjct: 12  WTEQEDILLVNFVHLFGDRRWDFIAK--VSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQE 71

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQK 114
           + LV+ L AK+GN+W KIA ++PGRT   +  +W     K+ ++ ++
Sbjct: 72  ERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKR 116

[Close]

BLAST of HG10011319 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 97.1 bits (240), Expect = 3.4e-20
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMANPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  YV+ +G   WN +S+     L R+ KSC  RW NYL+P LK+G ++P E
Sbjct: 11  WTAEEDRLLIEYVRVHGEGRWNSVSKLAG--LKRNGKSCRLRWVNYLRPDLKRGQITPHE 70

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEV-FKEKQLKQLQKAHNLTQR 121
           +S+++ L AK+GN+W  IA  +PGRT   +  +W   FK+K       A  +  R
Sbjct: 71  ESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKSR 123

The following BLAST results are available for this feature:

BLAST of HG10011319 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907190.1	1.8e-193	94.88	protein rough sheath 2 homolog [Benincasa hispida]	[more]
XP_023525837.1	2.1e-181	88.21	protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG7036747.1	8.0e-181	87.95	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949284.1	2.0e-179	87.44	protein rough sheath 2 homolog [Cucurbita moschata]	[more]
XP_022997764.1	3.7e-178	87.18	protein rough sheath 2 homolog [Cucurbita maxima]	[more]

BLAST of HG10011319 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94IB1	2.5e-76	46.47	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	3.2e-76	47.40	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
O80931	1.2e-75	47.03	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
B3VTV7	9.6e-20	38.71	Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1	[more]
Q9LTF7	1.6e-19	44.23	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]

BLAST of HG10011319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCE3	9.5e-180	87.44	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=...	[more]
A0A6J1KCH4	1.8e-178	87.18	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 ...	[more]
A0A6J1IZB3	8.3e-176	86.92	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 ...	[more]
A0A6J1FAF4	4.1e-175	86.41	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=...	[more]
A0A5D3CNU9	8.6e-165	82.81	Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of HG10011319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	8.7e-77	47.03	myb-like HTH transcriptional regulator family protein	[more]
AT1G25340.1	5.2e-21	43.81	myb domain protein 116	[more]
AT5G52600.1	1.2e-20	44.23	myb domain protein 82	[more]
AT3G46130.1	3.4e-20	40.19	myb domain protein 48	[more]
AT4G13480.1	3.4e-20	40.87	myb domain protein 79	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..322
None	No IPR available	COILS	Coil	Coil	coord: 324..344
None	No IPR available	GENE3D	1.10.10.60		coord: 62..123 e-value: 4.1E-11 score: 44.6
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..69 e-value: 1.1E-15 score: 57.6
None	No IPR available	GENE3D	1.10.10.60		coord: 4..58 e-value: 7.0E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..247
None	No IPR available	PANTHER	PTHR47214:SF1	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..367
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..367
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 58..106 e-value: 1.5E-9 score: 47.8 coord: 3..55 e-value: 4.0E-14 score: 62.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..53 score: 10.266769
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 7.619142
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..104 e-value: 1.60086E-6 score: 42.5626
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 1.30946E-9 score: 51.4222
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 23.818607
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 19.234663
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011319.1	HG10011319.1	mRNA