HG10011309 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011309
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlucose-repressible alcohol dehydrogenase transcriptional effector like
LocationChr01: 4666167 .. 4666391 (-)
RNA-Seq ExpressionHG10011309
SyntenyHG10011309
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGGTAGTGTTGGGTATTGAGAGAGTAGCAGTGAATTTGAAAGCAAAAATTATGAAGTCATTGAAGATGATGAAGAAGGCAACAACAAATTATTATGATAAGATGGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCTCAAAAGCTCATTCAACAGACCATGAAAATTGCTGACTCTCCATCCTCTTCTAAAACTTATGCTTTTTGA

mRNA sequence

ATGGTGATGGTAGTGTTGGGTATTGAGAGAGTAGCAGTGAATTTGAAAGCAAAAATTATGAAGTCATTGAAGATGATGAAGAAGGCAACAACAAATTATTATGATAAGATGGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCTCAAAAGCTCATTCAACAGACCATGAAAATTGCTGACTCTCCATCCTCTTCTAAAACTTATGCTTTTTGA

Coding sequence (CDS)

ATGGTGATGGTAGTGTTGGGTATTGAGAGAGTAGCAGTGAATTTGAAAGCAAAAATTATGAAGTCATTGAAGATGATGAAGAAGGCAACAACAAATTATTATGATAAGATGGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCTCAAAAGCTCATTCAACAGACCATGAAAATTGCTGACTCTCCATCCTCTTCTAAAACTTATGCTTTTTGA

Protein sequence

MVMVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSPSSSKTYAF
Homology
BLAST of HG10011309 vs. NCBI nr
Match: RYQ78961.1 (hypothetical protein Ahy_Scaffold8g108431 [Arachis hypogaea] >RYR60310.1 hypothetical protein Ahy_A04g017389 [Arachis hypogaea])

HSP 1 Score: 94.7 bits (234), Expect = 3.5e-16
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0

Query: 7  GIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSP 66
          G+ R+ VNLK+KI KSLKMMKKA++ YYDKMEKSESMRVEIRSRKA+KLI+ T+KIADSP
Sbjct: 3  GLGRLVVNLKSKI-KSLKMMKKASSYYYDKMEKSESMRVEIRSRKARKLIEDTLKIADSP 62

Query: 67 SSSKTYAF 75
           SSKTY F
Sbjct: 63 KSSKTYTF 69

BLAST of HG10011309 vs. NCBI nr
Match: KAG7036740.1 (hypothetical protein SDJN02_00360, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-14
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 0

Query: 8  IERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSPS 67
          ++R+ VNLKAKIMKSLKM  K  T+ YDKMEKSESMRVEIRSRKAQKLIQQTMKIADSP 
Sbjct: 1  MKRLVVNLKAKIMKSLKM--KKATDSYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSP- 60

Query: 68 SSKTYA 74
          SSKTYA
Sbjct: 61 SSKTYA 63

BLAST of HG10011309 vs. NCBI nr
Match: KAF5749953.1 (hypothetical protein HS088_TW03G00280 [Tripterygium wilfordii])

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-14
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 0

Query: 3  MVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKI 62
          MV++G+ER+ VNLK+++  S+KMMKK     YDK+EKSESMRVEI+SRKA+KLI++TMKI
Sbjct: 1  MVLMGLERMLVNLKSRVRSSVKMMKKP----YDKIEKSESMRVEIKSRKARKLIEKTMKI 60

Query: 63 ADSPSSSKTYAF 75
          ADSP+ SKTYAF
Sbjct: 61 ADSPTKSKTYAF 68

BLAST of HG10011309 vs. NCBI nr
Match: KAF7822344.1 (Glucose-repressible alcohol dehydrogenase transcriptional effector like [Senna tora])

HSP 1 Score: 83.6 bits (205), Expect = 8.0e-13
Identity = 46/69 (66.67%), Postives = 62/69 (89.86%), Query Frame = 0

Query: 6  LGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKIADS 65
          +G+ER+ V+LK+KI +SLKM K+A    YDKMEKSESMRVEIRSRKA+KLI+QT+KIADS
Sbjct: 1  MGLERLVVSLKSKISRSLKMKKEA----YDKMEKSESMRVEIRSRKARKLIEQTLKIADS 60

Query: 66 PSSSKTYAF 75
          P+++K+++F
Sbjct: 61 PNNTKSFSF 65

BLAST of HG10011309 vs. NCBI nr
Match: KAF5747436.1 (hypothetical protein HS088_TW05G00157 [Tripterygium wilfordii])

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-11
Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 0

Query: 3  MVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKI 62
          MV++G+ER+ VNLK+K   S+K         Y+K+EKSESMRVEI+SRKA+KLI++TMKI
Sbjct: 1  MVLMGLERMLVNLKSKTRSSMK-------KRYEKIEKSESMRVEIKSRKARKLIEETMKI 60

Query: 63 ADSPSSSKTYAF 75
          ADSP+ SKTYAF
Sbjct: 61 ADSPTKSKTYAF 65

BLAST of HG10011309 vs. ExPASy TrEMBL
Match: A0A445DAW0 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g017389 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-16
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0

Query: 7  GIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSP 66
          G+ R+ VNLK+KI KSLKMMKKA++ YYDKMEKSESMRVEIRSRKA+KLI+ T+KIADSP
Sbjct: 3  GLGRLVVNLKSKI-KSLKMMKKASSYYYDKMEKSESMRVEIRSRKARKLIEDTLKIADSP 62

Query: 67 SSSKTYAF 75
           SSKTY F
Sbjct: 63 KSSKTYTF 69

BLAST of HG10011309 vs. ExPASy TrEMBL
Match: A0A7J7DUH4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW03G00280 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-14
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 0

Query: 3  MVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKI 62
          MV++G+ER+ VNLK+++  S+KMMKK     YDK+EKSESMRVEI+SRKA+KLI++TMKI
Sbjct: 1  MVLMGLERMLVNLKSRVRSSVKMMKKP----YDKIEKSESMRVEIKSRKARKLIEKTMKI 60

Query: 63 ADSPSSSKTYAF 75
          ADSP+ SKTYAF
Sbjct: 61 ADSPTKSKTYAF 68

BLAST of HG10011309 vs. ExPASy TrEMBL
Match: A0A7J7DMX8 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW05G00157 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-12
Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 0

Query: 3  MVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKI 62
          MV++G+ER+ VNLK+K   S+K         Y+K+EKSESMRVEI+SRKA+KLI++TMKI
Sbjct: 1  MVLMGLERMLVNLKSKTRSSMK-------KRYEKIEKSESMRVEIKSRKARKLIEETMKI 60

Query: 63 ADSPSSSKTYAF 75
          ADSP+ SKTYAF
Sbjct: 61 ADSPTKSKTYAF 65

BLAST of HG10011309 vs. ExPASy TrEMBL
Match: A0A7J6E3S5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_010044 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 48/72 (66.67%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 3  MVVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQTMKI 62
          MV++G+ER+ V+LK KI +SLKM+KKA    YDK+EKSESMRVEIRS+KA+KLI++T+KI
Sbjct: 1  MVMMGLERLVVSLKTKI-RSLKMVKKA----YDKIEKSESMRVEIRSKKAKKLIEKTLKI 60

Query: 63 ADSPSSSKTYAF 75
          ADSP ++K+YAF
Sbjct: 61 ADSP-TTKSYAF 66

BLAST of HG10011309 vs. ExPASy TrEMBL
Match: A0A061EHJ2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019614 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 0

Query: 1  MVM-VVLGIERVAVNLKAKIMKSLKMMKKATTNYYDKMEKSESMRVEIRSRKAQKLIQQT 60
          MVM +++G  R+ V+LK+K ++ LKM K A   YYDK+EKSESMRVEIRSRKA+KLI++T
Sbjct: 1  MVMNMMMGFGRLVVSLKSK-LRYLKMKKPA---YYDKIEKSESMRVEIRSRKARKLIEET 60

Query: 61 MKIADSPSSSKTYAF 75
          MKIADSP +SKTYAF
Sbjct: 61 MKIADSPRTSKTYAF 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RYQ78961.13.5e-1677.94hypothetical protein Ahy_Scaffold8g108431 [Arachis hypogaea] >RYR60310.1 hypothe... [more]
KAG7036740.11.5e-1483.33hypothetical protein SDJN02_00360, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAF5749953.13.2e-1468.06hypothetical protein HS088_TW03G00280 [Tripterygium wilfordii][more]
KAF7822344.18.0e-1366.67Glucose-repressible alcohol dehydrogenase transcriptional effector like [Senna t... [more]
KAF5747436.12.0e-1162.50hypothetical protein HS088_TW05G00157 [Tripterygium wilfordii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A445DAW01.7e-1677.94Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g017389 PE=4 SV=1[more]
A0A7J7DUH41.6e-1468.06Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW03G00280 ... [more]
A0A7J7DMX89.5e-1262.50Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW05G00157 ... [more]
A0A7J6E3S52.1e-1166.67Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_010044 PE=4 SV=1[more]
A0A061EHJ22.1e-1166.67Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_019614 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34563BNACNNG33880D PROTEINcoord: 2..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011309.1HG10011309.1mRNA