HG10011286 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011286
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr01: 4404790 .. 4405752 (+)
RNA-Seq ExpressionHG10011286
SyntenyHG10011286
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCAGCAACGTTGATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTCATTCCGGCTGATTGCGATGCCTTTACAGCTTCCAAACCACTTTTGAACCTCACTTCCGGTGAGTTTGAAATAATCTTGGGGAGGGATATAGAAAGTAAAGTGTTTATAATTATTGAAATATGCTTTTTTTTTTTAATAAAAAAAATGGTCTGTTTATATACTTGGGATATAGAGATGAAATAGAATTTTGAAATCCTAGTTGTCAACATTTAGGGAAAATATCATTTTAGTCCTATAGTTTCAAGTTTATTCAATTTTAATTATTGTACTTTGAAATATCCAATTTTATCTGTATTTTCAAGAAATTTAAAATTTAATCTCTATTACTTGTTTGTTTTTGGTTTTTTTTTTTAAAAAAATTGTTATTTATTAGTATTTTCAATCTAAATTTTGAAAATATATTATTATATTATATTTTTTTGAATGAAAATATTATTATTATTTATCTAATATCAAAAAACATTAACTTTGAGAGTCTAAGTTTAAGATTTATTAAAATTACAGATACTAAAATTGAATAAAATATTGAACTGAACTAAAATGATATTTTTTGCAATTATTACGTAGTTATAAGATCGAATATCCTTTTGAAAATTCTAAAATATATAAAAAAGACATTTATTACTCCTTTTTCAAAAGCCATCTCAAACTCACTAATAAATGTTGTATATCCTAGATCTTGGAAAACTCCTTGTTGGAGATATCGATACGGAATTTCTAATGGAATCGCATGTGAGTCGAATTCTAGCCGAGCTGAGGTTCGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGACCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCACCGCCGGAAAACTGCGACCCCTTCAATCGCGTCAATCCCTGTTAA

mRNA sequence

ATGGCCGCAGCAACGTTGATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTCATTCCGGCTGATTGCGATGCCTTTACAGCTTCCAAACCACTTTTGAACCTCACTTCCGATCTTGGAAAACTCCTTGTTGGAGATATCGATACGGAATTTCTAATGGAATCGCATGTGAGTCGAATTCTAGCCGAGCTGAGGTTCGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGACCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCACCGCCGGAAAACTGCGACCCCTTCAATCGCGTCAATCCCTGTTAA

Coding sequence (CDS)

ATGGCCGCAGCAACGTTGATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTCATTCCGGCTGATTGCGATGCCTTTACAGCTTCCAAACCACTTTTGAACCTCACTTCCGATCTTGGAAAACTCCTTGTTGGAGATATCGATACGGAATTTCTAATGGAATCGCATGTGAGTCGAATTCTAGCCGAGCTGAGGTTCGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGACCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCACCGCCGGAAAACTGCGACCCCTTCAATCGCGTCAATCCCTGTTAA

Protein sequence

MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC
Homology
BLAST of HG10011286 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 4.6e-36
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M PATIAVVILLL+  +CDAF  +KPL N T   GK ++G DIDTEFLMESH+S
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPRYDSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of HG10011286 vs. NCBI nr
Match: KAG6607027.1 (hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158.7 bits (400), Expect = 3.0e-35
Identity = 83/118 (70.34%), Postives = 94/118 (79.66%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M PATIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+S
Sbjct: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPP ENCDPFNR NPC
Sbjct: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175

BLAST of HG10011286 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata])

HSP 1 Score: 157.1 bits (396), Expect = 8.8e-35
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M P TIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+S
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of HG10011286 vs. NCBI nr
Match: KAG7036723.1 (hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M PATIAVVILLL+   CDAF  +KPL N T   GK ++G DID EFLMESH+S
Sbjct: 1   MAATMPMKPATIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDNEFLMESHIS 60

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of HG10011286 vs. NCBI nr
Match: KAE8650593.1 (hypothetical protein Csa_011480, partial [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0

Query: 40  LGKLLVGDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDN 99
           LGK L+GDIDT+FLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDN
Sbjct: 1   LGKRLIGDIDTDFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDN 60

Query: 100 PPPENCDPFNRVNPC 115
           PP ENCDP+NR NPC
Sbjct: 61  PPSENCDPYNRANPC 75

BLAST of HG10011286 vs. ExPASy TrEMBL
Match: A0A0A0L9X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45
Identity = 94/114 (82.46%), Postives = 102/114 (89.47%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVGDIDTEFLMESHVSR 60
           MAAATL I  T+A+V LLL+   CDAF ASKP+ NL+SDLGK L+GDIDT+FLMESHVSR
Sbjct: 1   MAAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGDIDTDFLMESHVSR 60

Query: 61  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPP ENCDP+NR NPC
Sbjct: 61  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

BLAST of HG10011286 vs. ExPASy TrEMBL
Match: A0A6J1K9J3 (uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M PATIAVVILLL+  +CDAF  +KPL N T   GK ++G DIDTEFLMESH+S
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPRYDSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of HG10011286 vs. ExPASy TrEMBL
Match: A0A6J1G8W5 (uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC111452043 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG-DIDTEFLMESHVS 60
           MAA   M P TIAVVILLL+   CDAF  +KPL N T   GK ++G DIDTEFLMESH+S
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           R+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of HG10011286 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.3e-28
Identity = 74/117 (63.25%), Postives = 87/117 (74.36%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLLNLTSDLGKLLVG--DIDTEFLMESHV 60
           MAAA +MIPA +A++ILLL P   DA T  KPL N TS  GK L+G  DID+EFLMESH+
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           SRILA  + F+T +T +AN AS   CERPPRYDSCLG+  +NPPPENC  FNR NPC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of HG10011286 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 76/118 (64.41%), Postives = 85/118 (72.03%), Query Frame = 0

Query: 1   MAAATLMIPATIAVVILLLIPADCDAFTASKPLL-NLTSDLGKLLVG--DIDTEFLMESH 60
           MA A +MIP  +A+ ILL  P DCDA T SK LL N T    K L+G  DI +EFLME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  VSRILAE-LRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 115
           +SRILAE LRF+TM TPNAN  SV +CERPPRYDSCLGE R+ PP ENC  FNR NPC
Sbjct: 61  LSRILAESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022998176.14.6e-3671.19uncharacterized protein LOC111492901 [Cucurbita maxima][more]
KAG6607027.13.0e-3570.34hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948337.18.8e-3569.49uncharacterized protein LOC111452043 [Cucurbita moschata][more]
KAG7036723.11.1e-3469.49hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAE8650593.11.1e-3292.00hypothetical protein Csa_011480, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L9X52.7e-4582.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
A0A6J1K9J32.2e-3671.19uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901... [more]
A0A6J1G8W54.2e-3569.49uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A6J1KBP52.3e-2863.25uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A6J1CP711.5e-2764.41uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011286.1HG10011286.1mRNA