HG10011257 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011257
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nijmegen breakage syndrome 1 protein
Location	Chr01: 4042696 .. 4050855 (+)
RNA-Seq Expression	HG10011257
Synteny	HG10011257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCAGTTGTTTGCTCGTTATGTGATCTTATTTGTTCCACAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGGTTCCCGCATCCATGCAGAAATATTTGTAGATGCTATGATCTCTTTAAATTCCCACAATAGTTACTTATCTGGCGTTTCCTCTAAATTAAGGATTAGCGATTGCTCCAAATATGGGACATTTGTTAGAAGGAATTCTGGTTTGAAGGAGAAAATTCATGAGTTTCCGAGAAAAGAAGCAAGCTTGTATGATGGAGACGTGGTTTCATTTGGATCTGGCAATGCCACCTACAGGTAATGTAAGAAACATTTAGAATAGTGATAAGATTTATCGTTCATGTTGCTCTCACTGCCTAGCTCTTTTCTTCTTCTTCTTCTTCTTATTATTATTTTGAACAAGAAACAACTTCTCGTTGATATAATGAAAAAGAGTAAAAGTTCAAAGGGATACGAACCCCAAAGGGGAGTGAAAAAAAATTTAAATATCAAATATAACCAAATAGAGATTAGTTATGAAAATAAATAAACATTTAAAGAACCAAGAACTTTTCCAAAATGCTTGTCTGAAGGACTTAGAGAGGTTGCAAATGAATGATGAAACTATGAATAAGGCCTCCATCAAACACTTACAACCGATAGCTAATTCAAAAGAACCAAGAACCAACTAGCAACCAACAAAAAGAAGACCTTTTAATATCTATTATAAAGCAACCCATGAAACATAAACAAAAAGCTTCTCACAAAAATAGATTGATTCTACCAAACTCCCAAACTTCAAGCCATTCCTTCACACAGCTTTACAAGAACTATTAACCCATTGAAAGAAGTTAAGAAGCTTTGGAAGAACCATCACGAGCAAAGAAATGAAAGGTCTGCTCATGCAAGTCAATCCAATTATCTCAGAGAAGACAAAATAAAACTTTGCAAAGCTAAATCTTGACACAGCTTTCTTCATAGAAGGTGGAAGATCTCCTTTCCCTTTTTGCTTTTGTGAATATATATATACTTCTCGGTTTCTTTTTTTTTTTTTTTTTAAAATGTCTCTTGAGAGGAAAATTACTATTTTATGGTCTAAGAAACTTTTCCCTCAACCAAATTTGCTAACACCCATTGTGCTTGAAGTCCTTATTAGCCTATAAACAAATCTTGCAGGTTCTCCTTTGTACAACTCTTGTTTTACGTTAACTGTTCAGAGTCCGTCCAATTGCAATTGCTTAGGGACAAGGTTTCATCCATCGGTAAGAAGTTGCTGATCGTCTTTTACTTATTACAAAAGGAATCCTTTATCTGGTTAATTAGAAGTTTCAATTTCCTAAGGTTTCTTATGTAACTGCTCAGTTGCTTTATATTAGCATGCTGTAGAACAAACGCTTGAAAACTCTCAATACAACCTTAAAGACTTGGTATTGAATATGTTATACTTATAGAATATGAGGAAAAAAGAGGGAATCCTTAACCTTATTTGTGCATAGCATTTTTAACTTAATAGCATGTTAAATTACATTGAAGAACAACTAACTAAAAGGATGTTTGTTTAAATTATCCATGAACTGTAAAAAGGATAAAATAAAATAAACTAAATAATTTCTAAGTAGTGCAAAAGAACAACCAATAACCAACTAAATTTATATGTCCTTAGAATTATATATAGATATATAAAATCAACCATCTAGATGTTTTAAAACATTTAACAATTTGCGGCTGATGCATATTTCCATGATCATCTAGCTCAGAACAAGTGGAAGATCCTGATATTAACCTTTCCATCTATTACACAATGAATGTTTACTGGGCACTTTTATGAATGAGTTCTGCATTTTTGCTGTGGAAGCTGTTCTGACAGATGTCTCTGTTAGGGAATTTTTTTACTGTGATGGAAGCTGTCGATCAAGTTCATTATCATTATGACATTATTTATTGCATGTTTTATCTTGAACAGCATCTACTCATTCTACAAGTTAAATCTTCATTCAAGAAAGTGAAGGAGTTTGTAGTTTTTGTTGAATTTGAAGAGTGTATGTATTAAAATGTAGGTGCTTGTACTTCTCATGATATTCAGGAGTGTACGCATGTACTTGTAGAGGAACTGATGCCTTTTAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACTAGTTGGGTCGAGGTAACAACGTGCTTCATTTATTAATTGTTTCTTCTACTGTGATGTCGACTTGTATCTTTATTTTCACAACCATATTATGGTAGGAGCTTGATCTTGAGAATAAAAAATTACACTGAATTGTATTAAGATATAAAAGTTTTTTTTTTCCTTAAATGAAAGACCGAACTTTCATTAAGAAAAATTAAAAAAGAAAAAATACACGTGCATACCCAAAAAGAGCCCACAAAAGGGCTTAAGTCAAGTAAAATAAGACTAAGGTGTAATTACAAAAAGACCTTGTCACTTATGCCCAAAGAGAGACAATAAATAAGATGATATAAAAGAAGAGTTACAATATCAACCCCAAACACTTCTATATAGGCCTGGACTCTCCTAAGAAAACTACACTCCAGAATTCTGAATGACTCCCTCTCATTCTAACTACCCTACCCTAACAACTACCACATAAATACGGATAATGGAACACTGAGAAAACCAGGAACTAATAGATTTTTTCTTAGAGATCCTCGGAGGAGCATCCTCATGACACTTTTTTTTTTCTTCTTCATATGAGAAGCATCCAACCTTCATTTCATTGATGTTATGAAACAAAAAGGTTATAAAGGGCTAAGATAGCCATGAGAATTACAAAAAGCAAGGCCAATGAGCTATAAGGGACGTAAAGGCTATAATCACAGAAGTATGGAGAGAATTTACACCAAGACAGGGAAGTATAAGTTAGGTTCTAATGATGAAGGACCAAAGAACATCCTCATATCCTGTTAGTTTCTTTTGCTCCAGCTCTCTTCACAAATATCAGTTCAACCATCCATATAATTACTTGATGAAAATCTGAACGTTCTTTTTGCTTTTATGTTTATGTTGGCTGTCATCGTAAACCAATAATGACTTTGGTTACAACTTTGTTAAATAAAGAAGATACTTCTCCATTTATTTTTATCTGTGCACTGACCATTGCCAAGCATTATTAGTATCTGCACCGCTGTAGATCCTCATTATTTGTCCTAACTTTGTTGAAGATGATATTTCTGATACTTTCTATTTCTAGATTCATGCTATCAACAAAAACATGAGAGAAGCAAGTTTTGGCATTCTTACTGATTGTTACACTTTAGTTATTTGCAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCGTGAGTGCTGCCTTTTAAGTTCAGCTGGGACAGCAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCGTGAGTGCTGCCTTTTAAGTTCAGCTGGGAACAAATCATTATTAAGTAATAGTAAATATTTTTTGAACTCGTTCTTTGAATCAGCTATCATCCAACAATGATTGTGGAAGGGATGCATGTCAAAGTTGTGGACCCCAACACTCGTAAAAACTGTTTGAGTGGATACACCTTTTTACTAGGGTCGGCACATATGGTAATGAATATGTTTTCATTTCAATTTATGTCTTTTCATTCTCACATTTTTTGGGAGTTGCTGGACAATCCTTTGACGAACGAATTATAAAATAAATTAGCTTTGTTTTAATTGTTCATCTTTCATGTTAAGTTTCTCAGGGGTTTGGAGTGTTATGAATTGGCTCGCTTGAAGGCATCTACTTGGTGCTCTCTTCCCAAATTATTTGGGGGATTTTCTATTCAAGATATTTGCCTCAATTGGAATGTCTTTATCTCTCATGATTAATTTTTTATTATGTTTTTATGTTTTTGCTTATTTCACTCTGTTTCAAAGTTTGTATCTTTGGAGCACTACTTTCTTTTCATTATATAAGTGAAAAGCTTTATCCTTGTTTTAAATTTAAAAAAAAAAAAAAAAATCATTATGGTAGTTCTATCATGTGTATTCAGTCCCAACAAGTAGAAGTTTGGAAGAAAGAAAGAAATAAAAGAAAGGAAAAGGAAAATTTTAAACTCATGACATTACTACCTATGAAAGTTTGGTTTCTTAAAAAAAAAAAAAGTGAGGGTACCAGTTGGGGATGTCATGTAAATAGTAATAAGTTATTAGTAAGGGTATAGTGGTGATTAGTTAGGGAGGGGGTTATAGAGTTTGGCTATAAATAGAGGCAGTGACGAAGGAGGAGGGGGATTACTTTGTGGTGAGTGAATTAGAGTTGGGAGAGATCTCAAGAGGGAGGGTGCAAGTACCTTGAATTACTCGTTTATCTTGTAGTTTCTTCTTAATATTGCAATATCGTGATACACTACCAATTCCACCACCTATCCGTTGTATTGATTCAAGCAGGAAGATAGACAACATCAATCTTGAAGGACGTTGAACAGGGGTAGGGTAGAGTCTCCAACAACCCACGAATTGTGGAATAGTGGGTGGTGGCAGATTTGTATCTCCAACTTGTGGAAGCATCCCATTCACACACAATGTCTCTTCTGTAAGTAAACTTGGAGAAAGTAATAGCAAACTTGGGGATTGATCCCCTTGGCCAATTTGTGTGTTGTGTGTTTGTGCTTCTTCTAGCAGAACAATATTGGGATCCTTTGGGCAACGAGAAGACTGACTAAGAGGAACTTCTTAGGCTGCACAGACAAGGTGTAATACTTTACTTGAGTTTTTACAATGTGACAGTTAAAAACTAAGAATGGAGACACCAGAGAGACATAGACGAGCAAGAGAGAGAAGAAGTAACTTCGTTTATTTTGGATTGATGCAATGGTTGAATGATAGAGCCAAAATATATAAAGATTACAAGAGAAAATAAATCTTATTCTTAAACACCTAACTTCCCTAAAATATAGGAGATCCTCTTAAGTATGTATTTGCTAAAAATAAACCATATATTCCAAAAAACTTCAAATTAAATCAAACTAATTCAATAGTAGTTATGCCAGAAAATTGTTTTCTGTCATGTTGAGTCTGGACAGTTATTAGAAGTTATATGTTTGTGTGTGGTATCTGGATTAGTAGCTATGTATGTGAAAACTATCTTTTGCTTTGTCTTATGTGGGGAGAGTTCAAACCTCGTTCCTATCCATGTATCATATTGTTATCTTTAGTGTTTACATATATTTTCTGCGTTTAGATACCTAACACTCTTTTGGTGGATTGGTTAGACTTTCATTATTTTGGTAATCAATTCCCCATATTTTAGCAGTACAAGTATGAGGATCAGCTGAAGATGTTATTGCAACAAGTTGGCGGTGCAAATGTGTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGTACGAGGCTCTATCTCTTTTCACATATACTGTATCCATTCTTTCCTAATTGCTTCTGAAGGCTGGGTGAACACTGTTGTTTGACTAATTTCATGTAAAAATATTCTAGTTCACATTAATTCTGACAGCAATGTGGTCTCATGGTTGACAATATGTACCGTATTATATACTTATGGGTATGAACTTTAGGATCGAGTCTTGTGAAAATACATGCTTAATACACTTCATTTATTTGTTGACAGTCACATAGCACATGACAGATAGTTCAATGTTTCAATAAAGTGAAACTTGCATGGCTTGGGGCCATAATTATTGATGACATAAATCATCTACATATACGTAATATCTTTACTCATGAAATCATAATTGCATTCCAAACGGTAAGGCTTAAGATGTGAACAGTGTTGAAAATATGCCTCAAATGGTGCTTTATGTAGTCTTTGATTATAAGAAATATAATGGCTTGAAGTCTTTATTCCATTTCTTTTGTTTATCTCAGTTCTGTGAACCTGGTGTTTGTTGGGCAATTGATTTGTATGATAACTATTGTAGGATTTGGGTAATGGAGAAAATGATCGGGTAGTATTCGTTATGCCTGGAGGATCAGCAGAAAAGTTGGATTCATCTTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAGGCTGGACAGAGACAATTTGATACATCCCTGTGGTAAGCAATCTTCTGAATGTAAAGTTTCCTTGCAGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGATAGCAGAATCCGATCTTGAAGTGGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATACGTAAGCAAATCAGAGGAATATTTAAGCAGACCAGAGGTGTCCATTGACAAGGCTGCTACTGGATCAGCAGGTGGCCATGAAACATTAAAAAATAGTTATAGTAGTGTCGAAATGAGAAAAGACAAGATATCCGACAAAAGAAATATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGATGAAACCCTCCTCAATAGTCACTGCAGAATACAGTGGAATTACAAACTTCAAACGCTTCAGAAAAGTATTACTATTTGCCTTTGAATGTCTTATTCTGCATGATTTCGTTTTAAATGGTGTGCAAATTACTGCTCCATATTGATGAGATCTTAGCCATATCCTTTTATTATGCTGTAAGATCATTTCCGATGCACGTTAATCAACCATTGTATGTTTTTGCTATCTTAAATGAACTAAATGGTGATTGTGATCATGTTGCCATTCAACTGTCAGTATGTGGGTTTAAGTAGCAGTAAAAAAGGATGTTATTGCCTCATATATGCTTAGCAGTGAAAAGTTTGTGTTGGTTGGCACATGGAGACAAATGTTATGGAAGTTGATACACATCACTCATGAACTTTCAACATTTTTGCAGACAGAAACTCACTCTGGGAATAGCTTTTATGATCTAGTCCCATTTGATAAGTATCCTTACAAGTAAGTGTTTCTCTTATGATCAGTGAAATTTGTTTCTTATCAAAAAAAAAAAAAAAAAAAGTAAGTGTTTCTCTCGCTTTTTTTTTCTTTCAAGAAACGGGATCCAACTCATTGCATTATACCCGCAGCTCACTGATCTTTAGAAGCTTTGCCTACTCAAGGACAACTCCATAGGGCAATAATGGTTTTAACTTTTAAGTTACTAAAATTCGAACTTGGTGTTTAAACTCTTAAGGGGCCGTTTGGGGCACCAACTAGAAGTTGGTGGAGTGGGTGGGGCACCAAATATAATAGTGGTGTATATAACTATTTATAACCTACAATTAAGTATAGTAAATACTATTTTGAAACCCTTTTTGCTACAGTATTTGCTATTTTTCACTTATCCTCTCTTTTCTTCTTTGCTATAGTGTTTACTGTTTCTTACCCAAACAAAAATAGTTTACACCCCAAACACAAATTATTATAATCCAGACTAAAATAGTCTATACTCCAAATACTAACTATAATAACCAACTTAGCGCTCCAAACGCCCCCTAAGAGACTTAAGATGGATAGAAATAGTGAGATTGTATCTTGGAGTCATTTGGGATGTGTTTGGTGCATAGTAGAGACATTCGTTCCATGTTGGGGAGGTGTTTCTGCATCTGGAACAAGGGCGCAGTCTTTCAGCAAGCTTATAACTTCATCATCGTGATGGGTGTTTGGCTGGGGAGAAATTGGGGAGAAATTGTAGAACTTTTAGAGGAGTTGAGAAGAAATCCTATGGTCCCTTCGGGGACATCCGATAAAATTGGAATGATACAAAGAAGAAATCCTATGAAGTGGTTTAAGATCATTAGATTTATTGCTTTTTGTGGCTTTTTTTTTTGCTAGGTTTGATTTTTTTTTTTTTTTATCGAAGTCCTTTTATTTGATGGTATCTTGATCTTCAAACATTTCAAGTCTGCGCCTATCTTACATTATTTCATGACTTTCTAGGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGCAAGGAAACAGAAGCTATAGCTGAAGATTTATTTCATAATGAGAAGGTGAGTCTTCTTAACTTATTTAGCATCACAAGTTAATAAATAGGCATACTTCACTACTTTAGGCTTAGGACATACAATTTTAACTTGATCAAATTTTAGGGACGGCGACGTGGAATGGCCGGTTCCCTTCGAGAGCTGTTTACTCGTTCTTAA

mRNA sequence

ATGCTCTCAGTTGTTTGCTCGTTATGTGATCTTATTTGTTCCACAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGGTTCCCGCATCCATGCAGAAATATTTGTAGATGCTATGATCTCTTTAAATTCCCACAATAGTTACTTATCTGGCGTTTCCTCTAAATTAAGGATTAGCGATTGCTCCAAATATGGGACATTTGTTAGAAGGAATTCTGGTTTGAAGGAGAAAATTCATGAGTTTCCGAGAAAAGAAGCAAGCTTGTATGATGGAGACGTGGTTTCATTTGGATCTGGCAATGCCACCTACAGGTTCTCCTTTGTACAACTCTTGTTTTACGTTAACTGTTCAGAGTCCGTCCAATTGCAATTGCTTAGGGACAAGGTTTCATCCATCGGTGCTTGTACTTCTCATGATATTCAGGAGTGTACGCATGTACTTGTAGAGGAACTGATGCCTTTTAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACTAGTTGGGTCGAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCGTGAGTGCTGCCTTTTAAGTTCAGCTGGGACAGCAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCCTATCATCCAACAATGATTGTGGAAGGGATGCATGTCAAAGTTGTGGACCCCAACACTCGTAAAAACTGTTTGAGTGGATACACCTTTTTACTAGGGTCGGCACATATGTACAAGTATGAGGATCAGCTGAAGATGTTATTGCAACAAGTTGGCGGTGCAAATGTGTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGATTTGGGTAATGGAGAAAATGATCGGGTAGTATTCGTTATGCCTGGAGGATCAGCAGAAAAGTTGGATTCATCTTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAGGCTGGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGATAGCAGAATCCGATCTTGAAGTGGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATACGTAAGCAAATCAGAGGAATATTTAAGCAGACCAGAGGTGTCCATTGACAAGGCTGCTACTGGATCAGCAGGTGGCCATGAAACATTAAAAAATAGTTATAGTAGTGTCGAAATGAGAAAAGACAAGATATCCGACAAAAGAAATATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGATGAAACCCTCCTCAATAGTCACTGCAGAATACAGTGGAATTACAAACTTCAAACGCTTCAGAAAAACAGAAACTCACTCTGGGAATAGCTTTTATGATCTAGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGCAAGGAAACAGAAGCTATAGCTGAAGATTTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCCGGTTCCCTTCGAGAGCTGTTTACTCGTTCTTAA

Coding sequence (CDS)

ATGCTCTCAGTTGTTTGCTCGTTATGTGATCTTATTTGTTCCACAGGCTGTGATTTGACTATAACAAAAGATAAAGGAGGTTCCCGCATCCATGCAGAAATATTTGTAGATGCTATGATCTCTTTAAATTCCCACAATAGTTACTTATCTGGCGTTTCCTCTAAATTAAGGATTAGCGATTGCTCCAAATATGGGACATTTGTTAGAAGGAATTCTGGTTTGAAGGAGAAAATTCATGAGTTTCCGAGAAAAGAAGCAAGCTTGTATGATGGAGACGTGGTTTCATTTGGATCTGGCAATGCCACCTACAGGTTCTCCTTTGTACAACTCTTGTTTTACGTTAACTGTTCAGAGTCCGTCCAATTGCAATTGCTTAGGGACAAGGTTTCATCCATCGGTGCTTGTACTTCTCATGATATTCAGGAGTGTACGCATGTACTTGTAGAGGAACTGATGCCTTTTAATGAAGCTCTAGTTGATGCCATCGTGGCTGAGAAACCTTTTGTTCTTACTAGTTGGGTCGAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCGTGAGTGCTGCCTTTTAAGTTCAGCTGGGACAGCAGGAAGAACCTCCTGTAACGAGATTCCATCCATTGATTCCTATCATCCAACAATGATTGTGGAAGGGATGCATGTCAAAGTTGTGGACCCCAACACTCGTAAAAACTGTTTGAGTGGATACACCTTTTTACTAGGGTCGGCACATATGTACAAGTATGAGGATCAGCTGAAGATGTTATTGCAACAAGTTGGCGGTGCAAATGTGTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGATTTGGGTAATGGAGAAAATGATCGGGTAGTATTCGTTATGCCTGGAGGATCAGCAGAAAAGTTGGATTCATCTTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAGGCTGGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGATAGCAGAATCCGATCTTGAAGTGGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATACGTAAGCAAATCAGAGGAATATTTAAGCAGACCAGAGGTGTCCATTGACAAGGCTGCTACTGGATCAGCAGGTGGCCATGAAACATTAAAAAATAGTTATAGTAGTGTCGAAATGAGAAAAGACAAGATATCCGACAAAAGAAATATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGATGAAACCCTCCTCAATAGTCACTGCAGAATACAGTGGAATTACAAACTTCAAACGCTTCAGAAAAACAGAAACTCACTCTGGGAATAGCTTTTATGATCTAGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGAAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGCAAGGAAACAGAAGCTATAGCTGAAGATTTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCCGGTTCCCTTCGAGAGCTGTTTACTCGTTCTTAA

Protein sequence

MLSVVCSLCDLICSTGCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLKEKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVSKSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKISDKRNIDIIFSQNLIVQHAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS

Homology

[Close]

BLAST of HG10011257 vs. NCBI nr
Match: XP_038906978.1 (nijmegen breakage syndrome 1 protein isoform X2 [Benincasa hispida])

HSP 1 Score: 856.7 bits (2212), Expect = 1.1e-244
Identity = 446/515 (86.60%), Postives = 460/515 (89.32%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDL ITKDKG SRIHAEI VD MI LNSH S LS VSSK++I DCSKYGTFVRRNSGLK
Sbjct: 31  GCDLPITKDKGVSRIHAEIVVDTMIFLNSHKSCLSNVSSKVKIRDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EKIHE PRKEASLYDGD+VSFGSGNATYRFSFVQLLFYV  SES Q+QLLRDKVSSIGAC
Sbjct: 91  EKIHELPRKEASLYDGDMVSFGSGNATYRFSFVQLLFYVIHSESFQVQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                    
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQL 255
              AGRTSCNEIPS DSYHPTM VEGMHVKV+DPNTRKNCLSGYTFLLGSAHMYKY D+L
Sbjct: 211 --FAGRTSCNEIPSFDSYHPTMAVEGMHVKVMDPNTRKNCLSGYTFLLGSAHMYKYGDRL 270

Query: 256 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITEL 315
           K LLQQVGGANVLSIEDFSSDSQDL NGENDRVVFVM GGSAEKLDSS K+DSYYKITE+
Sbjct: 271 KKLLQQVGGANVLSIEDFSSDSQDLSNGENDRVVFVMSGGSAEKLDSSYKIDSYYKITEV 330

Query: 316 VLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVSK 375
            LISSVLSGRLDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKPVVSNVQGPDEYVSK
Sbjct: 331 ALISSVLSGRLDRDNLIHPCEPGSSTCSTDETVVAESDLEAETSKPVVSNVQGPDEYVSK 390

Query: 376 SEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQH 435
           SEEYLSR EVSID AATGSAG HET KNSYS VEMRKDK+  SD RNIDIIFSQNLIVQ+
Sbjct: 391 SEEYLSRAEVSIDNAATGSAGDHETFKNSYSGVEMRKDKVDESDNRNIDIIFSQNLIVQN 450

Query: 436 AMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEE 495
           AMKP SIVTAE SGITNFKRFRKT+THSGNSFYDLVPFDKYPYKDNGDGRE+IAESLKEE
Sbjct: 451 AMKPYSIVTAENSGITNFKRFRKTQTHSGNSFYDLVPFDKYPYKDNGDGREDIAESLKEE 510

Query: 496 RRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           RRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 RRRKETEAIAEDLFHNEKGRRRGMAGSLKELFTRS 524

[Close]

BLAST of HG10011257 vs. NCBI nr
Match: XP_038906950.1 (nijmegen breakage syndrome 1 protein isoform X1 [Benincasa hispida] >XP_038906956.1 nijmegen breakage syndrome 1 protein isoform X1 [Benincasa hispida] >XP_038906967.1 nijmegen breakage syndrome 1 protein isoform X1 [Benincasa hispida])

HSP 1 Score: 852.0 bits (2200), Expect = 2.6e-243
Identity = 446/516 (86.43%), Postives = 460/516 (89.15%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDL ITKDKG SRIHAEI VD MI LNSH S LS VSSK++I DCSKYGTFVRRNSGLK
Sbjct: 31  GCDLPITKDKGVSRIHAEIVVDTMIFLNSHKSCLSNVSSKVKIRDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EKIHE PRKEASLYDGD+VSFGSGNATYRFSFVQLLFYV  SES Q+QLLRDKVSSIGAC
Sbjct: 91  EKIHELPRKEASLYDGDMVSFGSGNATYRFSFVQLLFYVIHSESFQVQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                    
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHM-YKYEDQ 255
              AGRTSCNEIPS DSYHPTM VEGMHVKV+DPNTRKNCLSGYTFLLGSAHM YKY D+
Sbjct: 211 --FAGRTSCNEIPSFDSYHPTMAVEGMHVKVMDPNTRKNCLSGYTFLLGSAHMQYKYGDR 270

Query: 256 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITE 315
           LK LLQQVGGANVLSIEDFSSDSQDL NGENDRVVFVM GGSAEKLDSS K+DSYYKITE
Sbjct: 271 LKKLLQQVGGANVLSIEDFSSDSQDLSNGENDRVVFVMSGGSAEKLDSSYKIDSYYKITE 330

Query: 316 LVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVS 375
           + LISSVLSGRLDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKPVVSNVQGPDEYVS
Sbjct: 331 VALISSVLSGRLDRDNLIHPCEPGSSTCSTDETVVAESDLEAETSKPVVSNVQGPDEYVS 390

Query: 376 KSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQ 435
           KSEEYLSR EVSID AATGSAG HET KNSYS VEMRKDK+  SD RNIDIIFSQNLIVQ
Sbjct: 391 KSEEYLSRAEVSIDNAATGSAGDHETFKNSYSGVEMRKDKVDESDNRNIDIIFSQNLIVQ 450

Query: 436 HAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKE 495
           +AMKP SIVTAE SGITNFKRFRKT+THSGNSFYDLVPFDKYPYKDNGDGRE+IAESLKE
Sbjct: 451 NAMKPYSIVTAENSGITNFKRFRKTQTHSGNSFYDLVPFDKYPYKDNGDGREDIAESLKE 510

Query: 496 ERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           ERRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 ERRRKETEAIAEDLFHNEKGRRRGMAGSLKELFTRS 525

[Close]

BLAST of HG10011257 vs. NCBI nr
Match: XP_004145862.1 (nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus])

HSP 1 Score: 844.3 bits (2180), Expect = 5.5e-241
Identity = 439/515 (85.24%), Postives = 460/515 (89.32%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTI KDKG SRIHAEI VDAMISLNSHNS+LS +SSK+RISDCSKYGTFVRRNSGLK
Sbjct: 31  GCDLTIAKDKGVSRIHAEILVDAMISLNSHNSHLSNISSKVRISDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EK+HE PRKEASLYDGDVVSFGSGNATYRFS VQLLFYVN SES Q QLLRDKVSSIGAC
Sbjct: 91  EKLHELPRKEASLYDGDVVSFGSGNATYRFSLVQLLFYVNRSESFQSQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                L S 
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE----------------LFS- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQL 255
               G+T+CNEIPS DSY PTM VEGMHVKVVDPNTRKNCLSGYTFLLG+A  YKY D+L
Sbjct: 211 ----GKTTCNEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRL 270

Query: 256 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITEL 315
           KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EKLDSS KVDSYYKITEL
Sbjct: 271 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITEL 330

Query: 316 VLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVSK 375
           +LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKP VSNVQGPD YVSK
Sbjct: 331 ILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSK 390

Query: 376 SEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQH 435
           S+EYLSRP +S+D AATGS GGHET+KNS S +EMRKDKI  SD RNIDIIFSQNLIVQH
Sbjct: 391 SDEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQH 450

Query: 436 AMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEE 495
           A KPS++VTAE +GI NFKRFRKT+THSGNSF +LVPFDKYPYKDNGDGREEIAESLKEE
Sbjct: 451 ATKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEE 510

Query: 496 RRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           RRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 RRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 523

[Close]

BLAST of HG10011257 vs. NCBI nr
Match: XP_011651398.1 (nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus] >KAE8650601.1 hypothetical protein Csa_010495 [Cucumis sativus])

HSP 1 Score: 840.1 bits (2169), Expect = 1.0e-239
Identity = 439/516 (85.08%), Postives = 460/516 (89.15%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTI KDKG SRIHAEI VDAMISLNSHNS+LS +SSK+RISDCSKYGTFVRRNSGLK
Sbjct: 31  GCDLTIAKDKGVSRIHAEILVDAMISLNSHNSHLSNISSKVRISDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EK+HE PRKEASLYDGDVVSFGSGNATYRFS VQLLFYVN SES Q QLLRDKVSSIGAC
Sbjct: 91  EKLHELPRKEASLYDGDVVSFGSGNATYRFSLVQLLFYVNRSESFQSQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                L S 
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE----------------LFS- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAH-MYKYEDQ 255
               G+T+CNEIPS DSY PTM VEGMHVKVVDPNTRKNCLSGYTFLLG+A   YKY D+
Sbjct: 211 ----GKTTCNEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDR 270

Query: 256 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITE 315
           LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EKLDSS KVDSYYKITE
Sbjct: 271 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITE 330

Query: 316 LVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVS 375
           L+LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKP VSNVQGPD YVS
Sbjct: 331 LILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVS 390

Query: 376 KSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQ 435
           KS+EYLSRP +S+D AATGS GGHET+KNS S +EMRKDKI  SD RNIDIIFSQNLIVQ
Sbjct: 391 KSDEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQ 450

Query: 436 HAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKE 495
           HA KPS++VTAE +GI NFKRFRKT+THSGNSF +LVPFDKYPYKDNGDGREEIAESLKE
Sbjct: 451 HATKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKE 510

Query: 496 ERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           ERRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 ERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 524

[Close]

BLAST of HG10011257 vs. NCBI nr
Match: XP_031738590.1 (nijmegen breakage syndrome 1 protein isoform X4 [Cucumis sativus])

HSP 1 Score: 840.1 bits (2169), Expect = 1.0e-239
Identity = 439/516 (85.08%), Postives = 460/516 (89.15%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTI KDKG SRIHAEI VDAMISLNSHNS+LS +SSK+RISDCSKYGTFVRRNSGLK
Sbjct: 21  GCDLTIAKDKGVSRIHAEILVDAMISLNSHNSHLSNISSKVRISDCSKYGTFVRRNSGLK 80

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EK+HE PRKEASLYDGDVVSFGSGNATYRFS VQLLFYVN SES Q QLLRDKVSSIGAC
Sbjct: 81  EKLHELPRKEASLYDGDVVSFGSGNATYRFSLVQLLFYVNRSESFQSQLLRDKVSSIGAC 140

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                L S 
Sbjct: 141 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE----------------LFS- 200

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAH-MYKYEDQ 255
               G+T+CNEIPS DSY PTM VEGMHVKVVDPNTRKNCLSGYTFLLG+A   YKY D+
Sbjct: 201 ----GKTTCNEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDR 260

Query: 256 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITE 315
           LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EKLDSS KVDSYYKITE
Sbjct: 261 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITE 320

Query: 316 LVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVS 375
           L+LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKP VSNVQGPD YVS
Sbjct: 321 LILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVS 380

Query: 376 KSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQ 435
           KS+EYLSRP +S+D AATGS GGHET+KNS S +EMRKDKI  SD RNIDIIFSQNLIVQ
Sbjct: 381 KSDEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQ 440

Query: 436 HAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKE 495
           HA KPS++VTAE +GI NFKRFRKT+THSGNSF +LVPFDKYPYKDNGDGREEIAESLKE
Sbjct: 441 HATKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKE 500

Query: 496 ERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           ERRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 501 ERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 514

[Close]

BLAST of HG10011257 vs. ExPASy Swiss-Prot
Match: Q0H8D7 (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.5e-87
Identity = 211/536 (39.37%), Postives = 307/536 (57.28%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDA-MISLNSHNSYLSGVSS-KLRISDCSKYGTFVRRNSG 75
           GCD+ I KDKG SRIHAE+  DA  +S +  N   S  SS  +R+ DCSKYGTFV+ + G
Sbjct: 31  GCDIIINKDKGVSRIHAELTFDATTVSTSRRNKSSSDTSSFVIRVKDCSKYGTFVKTDLG 90

Query: 76  LKEKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYV-NCSESVQL-QLLRDKVSS 135
            K+K+HE   KE  L DGDV++FG+G+A YR S + L+FY+   SE+ ++ Q ++D VSS
Sbjct: 91  TKDKVHELSNKEKILQDGDVIAFGTGSAIYRLSLIPLVFYLCPSSETFKVDQPVQDAVSS 150

Query: 136 IGACTSHDI-QECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIREC 195
           IGA  S  + +ECTHVL+E  M  NEAL++AI+A+K  +LT+WV                
Sbjct: 151 IGARISPTLSEECTHVLLEPRMQVNEALINAILAKKTIILTNWV---------------- 210

Query: 196 CLLSSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYK 255
            LL     A ++ C+EIP    Y P+++VE   V V++ N R+ CL G+TF+L     Y+
Sbjct: 211 MLL-----AEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTFVLEPTDTYR 270

Query: 256 YEDQLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYY 315
           +      LL +V GA  ++IED SS SQD   GE +R++ V+P  + +K      +    
Sbjct: 271 FGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFGRFKHLSLLS 330

Query: 316 KITELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQG-- 375
           ++ E+ L+ +V SG L   +LI P    SS+CSTDETV+A+S+ E E +   V  +    
Sbjct: 331 RVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTSSVHMIDATE 390

Query: 376 -------------PDEYVSKSEEYLSRPEV-SIDKAATGSAGGHETLKNSYSSVEMRKDK 435
                         D  V+  EE  +  E  S++  A   + GH   KNS  SV +R+D+
Sbjct: 391 KAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGHMDEKNSSDSVTIRRDR 450

Query: 436 ISDKR--NIDIIFSQNLIVQHAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFD 495
             +      +II++Q+LIV+       + +    G+ +FKRFRK     GNSF  L+PF 
Sbjct: 451 NDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFA 510

Query: 496 KYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           K PYK+      ++ + +KEE++RK+ EAIAEDLF  EK R+RG AGS+R   + S
Sbjct: 511 KDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

[Close]

BLAST of HG10011257 vs. ExPASy Swiss-Prot
Match: Q7XD82 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-66
Identity = 179/550 (32.55%), Postives = 296/550 (53.82%), Query Frame = 0


Query: 17  CDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK- 76
           CD+ +  D   SR+HAEI V+ M++ +  +   +   S +R+ D SKYGTF  +  G + 
Sbjct: 32  CDVIVQTDTSISRVHAEIVVEKMVAWDPQSGAPAN-PSYVRVVDRSKYGTFFNKVQGTQG 91

Query: 77  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQ-LLRDKVSSIGA 136
            ++H+   ++A L DGD V+FG+GNAT+R SFV ++ + +  +S ++   L+  ++SIGA
Sbjct: 92  SRLHK--DEDAMLADGDTVTFGTGNATFRLSFVPIVVFFHGKKSGRISPCLQAVMTSIGA 151

Query: 137 -CTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLL 196
             T     ECTHVLV+E       L+DA++A+K  VL  W +                  
Sbjct: 152 YATRKWSDECTHVLVDESCSLTPELLDAVLAKKQIVLGDWFKV----------------- 211

Query: 197 SSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYED 256
                A +    E+PS   Y P + ++GM ++VV+    ++CL+GYTF+LGS+  YK+ D
Sbjct: 212 ----MAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFILGSSEKYKFGD 271

Query: 257 QLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKIT 316
           +L  LL+   GA  L +++F ++SQD G GEND+ + ++P  S  +      +    KIT
Sbjct: 272 KLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKIRGLFPLSKIT 331

Query: 317 ELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETS-------------- 376
           ++ L +++LSG L+   +  P    +S+ STDET++ +SD+E++T+              
Sbjct: 332 DVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDHTVAASKSEHH 391

Query: 377 --------KPVVS-------------------NVQGPDEYVSKSEEYLSRPEVSIDKAAT 436
                   K VV+                   + Q  DE V   EE +      I+K AT
Sbjct: 392 IEHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPMEEDVK----VIEKTAT 451

Query: 437 GSAGGHETLKNSYSSVEMRKDKISDKRN--IDIIFSQNLIVQHAMKPSSIVTAEYSGITN 496
              G     ++     ++ KD+  D R+    +I++QNL+V+  ++ +   + E  GI N
Sbjct: 452 -MRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGI-N 511

Query: 497 FKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNE 521
           FKRFRK    SGNSF DL+P+ + PY+++   R  + + ++EE++R++ EAIAEDLF+N 
Sbjct: 512 FKRFRKRGAVSGNSFKDLIPYSREPYRESDYERGTVTDFMREEKKRRQMEAIAEDLFNNA 550

[Close]

BLAST of HG10011257 vs. ExPASy Swiss-Prot
Match: B8BHK8 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=NBS1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.3e-66
Identity = 178/550 (32.36%), Postives = 296/550 (53.82%), Query Frame = 0


Query: 17  CDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK- 76
           CD+ +  D   SR+HAEI V+ M++ +  +   +   S +R+ D SKYGTF  +  G + 
Sbjct: 32  CDVIVQTDTSISRVHAEIVVEKMVAWDPQSGAPAN-PSYVRVVDRSKYGTFFNKVQGTQG 91

Query: 77  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQ-LLRDKVSSIGA 136
            ++H+   ++A L DGD V+FG+G+AT+R SFV ++ + +  +S ++   L+  ++SIGA
Sbjct: 92  SRLHK--DEDAMLADGDTVTFGTGSATFRLSFVPIVVFFHGKKSGRISPSLQAVMTSIGA 151

Query: 137 -CTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLL 196
             T     ECTHVLV+E       L+DA++A+K  VL  W +                  
Sbjct: 152 YATRKWSDECTHVLVDESCSLTPELLDAVLAKKQIVLGDWFKV----------------- 211

Query: 197 SSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYED 256
                A +     +PS   Y P + ++GM ++VV+    ++CL+GYTF+LGS+  YK+ D
Sbjct: 212 ----MAEKNIHTAMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFILGSSEKYKFGD 271

Query: 257 QLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKIT 316
           +L  LL+   GA  L +++F ++SQD G GEND+ + ++P  S  +    S +    KIT
Sbjct: 272 KLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKISGLFPLSKIT 331

Query: 317 ELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETS-------------- 376
           ++ L +++LSG L+   +  P    +S+ STDET++ +SD+E++T+              
Sbjct: 332 DVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDHTVAASKSEHH 391

Query: 377 --------KPVVS-------------------NVQGPDEYVSKSEEYLSRPEVSIDKAAT 436
                   K VV+                   + Q  DE V   EE +      I+K AT
Sbjct: 392 IEHISDDKKEVVAISEEDAVNLVEAKTSINLHSYQEKDEIVKPMEEDVK----VIEKTAT 451

Query: 437 GSAGGHETLKNSYSSVEMRKDKISDKRN--IDIIFSQNLIVQHAMKPSSIVTAEYSGITN 496
              G     ++     ++ KD+  D R+    +I++QNL+V+  ++ +   + E  GI N
Sbjct: 452 -MRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGI-N 511

Query: 497 FKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNE 521
           FKRFRK    SGNSF DL+P+ + PY+++   R  + + ++EE++R++ EAIAEDLF+N 
Sbjct: 512 FKRFRKRGAVSGNSFKDLIPYSREPYRESDYKRGTVIDFMREEKKRRQMEAIAEDLFNNA 550

[Close]

BLAST of HG10011257 vs. ExPASy TrEMBL
Match: A0A0A0LA01 (FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G308200 PE=4 SV=1)

HSP 1 Score: 863.6 bits (2230), Expect = 4.3e-247
Identity = 450/530 (84.91%), Postives = 472/530 (89.06%), Query Frame = 0


Query: 1   MLSVVCSLCDLICSTGCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISD 60
           MLSVVCSLCD + S GCDLTI KDKG SRIHAEI VDAMISLNSHNS+LS +SSK+RISD
Sbjct: 1   MLSVVCSLCDHVSSAGCDLTIAKDKGVSRIHAEILVDAMISLNSHNSHLSNISSKVRISD 60

Query: 61  CSKYGTFVRRNSGLKEKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESV 120
           CSKYGTFVRRNSGLKEK+HE PRKEASLYDGDVVSFGSGNATYRFS VQLLFYVN SES 
Sbjct: 61  CSKYGTFVRRNSGLKEKLHELPRKEASLYDGDVVSFGSGNATYRFSLVQLLFYVNRSESF 120

Query: 121 QLQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPV 180
           Q QLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE     
Sbjct: 121 QSQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE----- 180

Query: 181 TRFHPLIRECCLLSSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYT 240
                      L S     G+T+CNEIPS DSY PTM VEGMHVKVVDPNTRKNCLSGYT
Sbjct: 181 -----------LFS-----GKTTCNEIPSFDSYQPTMTVEGMHVKVVDPNTRKNCLSGYT 240

Query: 241 FLLGSAHMYKYEDQLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKL 300
           FLLG+A  YKY D+LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EKL
Sbjct: 241 FLLGNAQSYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKL 300

Query: 301 DSSSKVDSYYKITELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSK 360
           DSS KVDSYYKITEL+LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSK
Sbjct: 301 DSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSK 360

Query: 361 PVVSNVQGPDEYVSKSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDK 420
           P VSNVQGPD YVSKS+EYLSRP +S+D AATGS GGHET+KNS S +EMRKDKI  SD 
Sbjct: 361 PAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDS 420

Query: 421 RNIDIIFSQNLIVQHAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKD 480
           RNIDIIFSQNLIVQHA KPS++VTAE +GI NFKRFRKT+THSGNSF +LVPFDKYPYKD
Sbjct: 421 RNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKD 480

Query: 481 NGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           NGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 481 NGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 508

[Close]

BLAST of HG10011257 vs. ExPASy TrEMBL
Match: A0A1S3C596 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496815 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 4.7e-238
Identity = 433/515 (84.08%), Postives = 454/515 (88.16%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTI KDKG SRIHAEI VDAMI LNSHNS+LS + SK+RISDCSKYGTFVRRNSGLK
Sbjct: 31  GCDLTIAKDKGVSRIHAEILVDAMIPLNSHNSHLSNICSKVRISDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EK+HE  +KEASL DGDVVSFGSGNATYRFSFVQLLFYVN SES Q QLLRDKVSSIGAC
Sbjct: 91  EKLHELSKKEASLCDGDVVSFGSGNATYRFSFVQLLFYVNRSESFQSQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                    
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQL 255
              AG+T+CNEIPS DSY PTM VEGMHVKVVDP+TRKNCLSGYTFLLG   MYKY D+L
Sbjct: 211 --FAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMYKYGDRL 270

Query: 256 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITEL 315
           KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EK DSSSKVDSYYKITEL
Sbjct: 271 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITEL 330

Query: 316 VLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVSK 375
           +LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKPVVSNVQGPDEY+SK
Sbjct: 331 ILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSK 390

Query: 376 SEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQH 435
           S+EYLSR  VS+D A TGS GGHE +KNS S +EMRKDKI  SD RNIDIIFSQNLIVQH
Sbjct: 391 SDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQH 450

Query: 436 AMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEE 495
           A K S++VTAE SGITNFKRFRKT+THSGNSF +LVPFDKYPYKDNGDGREEIAESLKEE
Sbjct: 451 ATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEE 510

Query: 496 RRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           RRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 RRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 524

[Close]

BLAST of HG10011257 vs. ExPASy TrEMBL
Match: A0A1S3C4N6 (nijmegen breakage syndrome 1 protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496815 PE=4 SV=1)

HSP 1 Score: 828.9 bits (2140), Expect = 1.2e-236
Identity = 433/516 (83.91%), Postives = 454/516 (87.98%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTI KDKG SRIHAEI VDAMI LNSHNS+LS + SK+RISDCSKYGTFVRRNSGLK
Sbjct: 31  GCDLTIAKDKGVSRIHAEILVDAMIPLNSHNSHLSNICSKVRISDCSKYGTFVRRNSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EK+HE  +KEASL DGDVVSFGSGNATYRFSFVQLLFYVN SES Q QLLRDKVSSIGAC
Sbjct: 91  EKLHELSKKEASLCDGDVVSFGSGNATYRFSFVQLLFYVNRSESFQSQLLRDKVSSIGAC 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVE                    
Sbjct: 151 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHM-YKYEDQ 255
              AG+T+CNEIPS DSY PTM VEGMHVKVVDP+TRKNCLSGYTFLLG   M YKY D+
Sbjct: 211 --FAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMQYKYGDR 270

Query: 256 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITE 315
           LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGS EK DSSSKVDSYYKITE
Sbjct: 271 LKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITE 330

Query: 316 LVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVS 375
           L+LISSVLSG LDRDNLIHPCEPGSSTCSTDETV+AESDLE ETSKPVVSNVQGPDEY+S
Sbjct: 331 LILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLS 390

Query: 376 KSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQ 435
           KS+EYLSR  VS+D A TGS GGHE +KNS S +EMRKDKI  SD RNIDIIFSQNLIVQ
Sbjct: 391 KSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQ 450

Query: 436 HAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKE 495
           HA K S++VTAE SGITNFKRFRKT+THSGNSF +LVPFDKYPYKDNGDGREEIAESLKE
Sbjct: 451 HATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKE 510

Query: 496 ERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           ERRRKETEAIAEDLFHNEKGRRRGMAGSL+ELFTRS
Sbjct: 511 ERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 525

[Close]

BLAST of HG10011257 vs. ExPASy TrEMBL
Match: A0A6J1GCD8 (nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111452863 PE=4 SV=1)

HSP 1 Score: 807.0 bits (2083), Expect = 4.7e-230
Identity = 417/515 (80.97%), Postives = 449/515 (87.18%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTITKDKG SRIHAEI VDAMI LNSH SYLS VSSK+RISDCSKYGTFV R SGLK
Sbjct: 31  GCDLTITKDKGVSRIHAEIVVDAMIFLNSHKSYLSNVSSKVRISDCSKYGTFVSRKSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EKIHE P+KEASLYDGDV+SFGSGNATYRFSFVQL+FYV+ S S Q QLLRDKVSSIGA 
Sbjct: 91  EKIHELPKKEASLYDGDVISFGSGNATYRFSFVQLVFYVHHSVSFQFQLLRDKVSSIGAS 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDI+ECTHVLVEELMPF+EALVDAIVAEKPFV+TSWVE                    
Sbjct: 151 TSHDIRECTHVLVEELMPFDEALVDAIVAEKPFVITSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQL 255
              AGRTSCNEIP  DSY+PTM VEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKY D+L
Sbjct: 211 --FAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYGDRL 270

Query: 256 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITEL 315
           KMLLQQVGGANVLSIEDFSSDSQD GNGEN+RVVF++PGG AEKL SS KVDSYYKITEL
Sbjct: 271 KMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKVDSYYKITEL 330

Query: 316 VLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQGPDEYVSK 375
           VLISSVLSG+LDRDNLI PCEPGSSTCSTDETV+AESDLE ET KPV SNVQG DE++  
Sbjct: 331 VLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNVQGSDEHLGI 390

Query: 376 SEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFSQNLIVQH 435
            +E+LS+PEVSID A +GSAGGH+T +NSYS V+MR DK+  SD  NIDIIF+QNLIVQH
Sbjct: 391 PDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDIIFTQNLIVQH 450

Query: 436 AMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEIAESLKEE 495
            MKPSSIVTAE SGITNFKRFRKTETHSGNSFY+LVPFDKYPYKDNGDGREEIAESLKEE
Sbjct: 451 VMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEE 510

Query: 496 RRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           R+RKE EAI+EDLF+NEKGRRRGM GSL++L TRS
Sbjct: 511 RKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of HG10011257 vs. ExPASy TrEMBL
Match: A0A6J1K8B4 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 4.0e-229
Identity = 417/522 (79.89%), Postives = 450/522 (86.21%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDAMISLNSHNSYLSGVSSKLRISDCSKYGTFVRRNSGLK 75
           GCDLTITKDKG SRIHAEI VDAMI +NSH SYLS VSSK+RISDCSKYGTFV R SGLK
Sbjct: 31  GCDLTITKDKGVSRIHAEIVVDAMIFINSHKSYLSNVSSKVRISDCSKYGTFVSRKSGLK 90

Query: 76  EKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYVNCSESVQLQLLRDKVSSIGAC 135
           EKIHE P+KEASLYDGDV+SFGSGNATYRFSFVQL+FYV+ S S Q QLLRDKVSSIGA 
Sbjct: 91  EKIHELPKKEASLYDGDVISFGSGNATYRFSFVQLVFYVHHSVSFQFQLLRDKVSSIGAS 150

Query: 136 TSHDIQECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIRECCLLSS 195
           TSHDI+ECTHVLVEELMPF+EALVDAIVAEKPFV+TSWVE                    
Sbjct: 151 TSHDIRECTHVLVEELMPFDEALVDAIVAEKPFVITSWVEL------------------- 210

Query: 196 AGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYEDQL 255
              AG+TSCNEIP  DSYHPTM VEGMHVKVVDPNTRKNCLSGY FLLGSAHMYKY D+L
Sbjct: 211 --FAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSAHMYKYGDRL 270

Query: 256 KMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYYKITEL 315
           KMLLQQVGGANVLSIEDFSSDSQD GNGEN+RVVF++PGG AEKL SS KVDSYYKI EL
Sbjct: 271 KMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKVDSYYKIAEL 330

Query: 316 VLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQG------- 375
           VLISSVLSG+LDRDNLI PCEPGSSTCSTDETV+AESDLE ET KPV SNVQG       
Sbjct: 331 VLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNVQGSDEHLGI 390

Query: 376 PDEYVSKSEEYLSRPEVSIDKAATGSAGGHETLKNSYSSVEMRKDKI--SDKRNIDIIFS 435
           PDE++SK E+YLS+PEVSID AA+GSAG H+T +NSYS V+MR D++  SD  NIDIIF+
Sbjct: 391 PDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESDNSNIDIIFT 450

Query: 436 QNLIVQHAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFDKYPYKDNGDGREEI 495
           QNLIVQH MKPSSIVTAE  GITNFKRFRKTETHSGNSFY+LVPFDKYPYKDNGDGREEI
Sbjct: 451 QNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEI 510

Query: 496 AESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           AESLKEER+RKE EAI+EDLF+NEKGRRRGMAGSL++L TRS
Sbjct: 511 AESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of HG10011257 vs. TAIR 10
Match: AT3G02680.1 (nijmegen breakage syndrome 1 )

HSP 1 Score: 324.3 bits (830), Expect = 1.8e-88
Identity = 211/536 (39.37%), Postives = 307/536 (57.28%), Query Frame = 0


Query: 16  GCDLTITKDKGGSRIHAEIFVDA-MISLNSHNSYLSGVSS-KLRISDCSKYGTFVRRNSG 75
           GCD+ I KDKG SRIHAE+  DA  +S +  N   S  SS  +R+ DCSKYGTFV+ + G
Sbjct: 31  GCDIIINKDKGVSRIHAELTFDATTVSTSRRNKSSSDTSSFVIRVKDCSKYGTFVKTDLG 90

Query: 76  LKEKIHEFPRKEASLYDGDVVSFGSGNATYRFSFVQLLFYV-NCSESVQL-QLLRDKVSS 135
            K+K+HE   KE  L DGDV++FG+G+A YR S + L+FY+   SE+ ++ Q ++D VSS
Sbjct: 91  TKDKVHELSNKEKILQDGDVIAFGTGSAIYRLSLIPLVFYLCPSSETFKVDQPVQDAVSS 150

Query: 136 IGACTSHDI-QECTHVLVEELMPFNEALVDAIVAEKPFVLTSWVEEEPPVTRFHPLIREC 195
           IGA  S  + +ECTHVL+E  M  NEAL++AI+A+K  +LT+WV                
Sbjct: 151 IGARISPTLSEECTHVLLEPRMQVNEALINAILAKKTIILTNWV---------------- 210

Query: 196 CLLSSAGTAGRTSCNEIPSIDSYHPTMIVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYK 255
            LL     A ++ C+EIP    Y P+++VE   V V++ N R+ CL G+TF+L     Y+
Sbjct: 211 MLL-----AEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTFVLEPTDTYR 270

Query: 256 YEDQLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSAEKLDSSSKVDSYY 315
           +      LL +V GA  ++IED SS SQD   GE +R++ V+P  + +K      +    
Sbjct: 271 FGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFGRFKHLSLLS 330

Query: 316 KITELVLISSVLSGRLDRDNLIHPCEPGSSTCSTDETVIAESDLEVETSKPVVSNVQG-- 375
           ++ E+ L+ +V SG L   +LI P    SS+CSTDETV+A+S+ E E +   V  +    
Sbjct: 331 RVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTSSVHMIDATE 390

Query: 376 -------------PDEYVSKSEEYLSRPEV-SIDKAATGSAGGHETLKNSYSSVEMRKDK 435
                         D  V+  EE  +  E  S++  A   + GH   KNS  SV +R+D+
Sbjct: 391 KAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGHMDEKNSSDSVTIRRDR 450

Query: 436 ISDKR--NIDIIFSQNLIVQHAMKPSSIVTAEYSGITNFKRFRKTETHSGNSFYDLVPFD 495
             +      +II++Q+LIV+       + +    G+ +FKRFRK     GNSF  L+PF 
Sbjct: 451 NDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFA 510

Query: 496 KYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLRELFTRS 529
           K PYK+      ++ + +KEE++RK+ EAIAEDLF  EK R+RG AGS+R   + S
Sbjct: 511 KDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

The following BLAST results are available for this feature:

BLAST of HG10011257 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906978.1	1.1e-244	86.60	nijmegen breakage syndrome 1 protein isoform X2 [Benincasa hispida]	[more]
XP_038906950.1	2.6e-243	86.43	nijmegen breakage syndrome 1 protein isoform X1 [Benincasa hispida] >XP_03890695...	[more]
XP_004145862.1	5.5e-241	85.24	nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus]	[more]
XP_011651398.1	1.0e-239	85.08	nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus] >KAE8650601.1 ...	[more]
XP_031738590.1	1.0e-239	85.08	nijmegen breakage syndrome 1 protein isoform X4 [Cucumis sativus]	[more]

BLAST of HG10011257 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0H8D7	2.5e-87	39.37	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=...	[more]
Q7XD82	1.9e-66	32.55	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
B8BHK8	9.3e-66	32.36	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=N...	[more]

BLAST of HG10011257 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA01	4.3e-247	84.91	FHA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G308200 PE=4 SV...	[more]
A0A1S3C596	4.7e-238	84.08	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C4N6	1.2e-236	83.91	nijmegen breakage syndrome 1 protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GCD8	4.7e-230	80.97	nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1K8B4	4.0e-229	79.89	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10011257 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02680.1	1.8e-88	39.37	nijmegen breakage syndrome 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 16..97 e-value: 2.4E-6 score: 27.8
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 14..68 score: 7.6728
IPR000253	Forkhead-associated (FHA) domain	CDD	cd00060	FHA	coord: 14..106 e-value: 1.5637E-4 score: 38.9066
None	No IPR available	GENE3D	2.60.200.20		coord: 14..121 e-value: 2.7E-11 score: 45.2
IPR040227	Nibrin-related	PANTHER	PTHR12162	NIBRIN-RELATED	coord: 16..511
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 15..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011257.1	HG10011257.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0030870	Mre11 complex
molecular_function	GO:0005515	protein binding