HG10011250 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011250
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEF hand calcium-binding protein family
LocationChr01: 3938479 .. 3938955 (+)
RNA-Seq ExpressionHG10011250
SyntenyHG10011250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAGAATTCCCATTCAATTTCAAATCCAGTATCTTCCTTGGGCTCCATGGACGAGGTCATCAAGGTCTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATTTCCGTCAACGAGCTCGGTGCCGCCCTTGGTGAACTTGGCGGCAAGATCTCCACCGACGAGATCCGCCGCATTATGTCCGAGATCGATAAGGACGGCGACGGATTCATCGACCTCGACGAGTTCGCTGAGTTTCATCAGGACGCCTCGTCTTCCAGCGGAGGTAACAAAGATCTACAGGACGCTTTCGATCTGTATGATATCGATAAGAACGGCCTTATCTCTGCAAAGGAATTGCACTCTGTTCTCAAACGCCTCGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCCGTCGACGTCGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACTCGATCTTAG

mRNA sequence

ATGGGGAAGAAGAATTCCCATTCAATTTCAAATCCAGTATCTTCCTTGGGCTCCATGGACGAGGTCATCAAGGTCTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATTTCCGTCAACGAGCTCGGTGCCGCCCTTGGTGAACTTGGCGGCAAGATCTCCACCGACGAGATCCGCCGCATTATGTCCGAGATCGATAAGGACGGCGACGGATTCATCGACCTCGACGAGTTCGCTGAGTTTCATCAGGACGCCTCGTCTTCCAGCGGAGGTAACAAAGATCTACAGGACGCTTTCGATCTGTATGATATCGATAAGAACGGCCTTATCTCTGCAAAGGAATTGCACTCTGTTCTCAAACGCCTCGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCCGTCGACGTCGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACTCGATCTTAG

Coding sequence (CDS)

ATGGGGAAGAAGAATTCCCATTCAATTTCAAATCCAGTATCTTCCTTGGGCTCCATGGACGAGGTCATCAAGGTCTTCAACAAGTTCGACAAGAACGGCGACGGCAAGATTTCCGTCAACGAGCTCGGTGCCGCCCTTGGTGAACTTGGCGGCAAGATCTCCACCGACGAGATCCGCCGCATTATGTCCGAGATCGATAAGGACGGCGACGGATTCATCGACCTCGACGAGTTCGCTGAGTTTCATCAGGACGCCTCGTCTTCCAGCGGAGGTAACAAAGATCTACAGGACGCTTTCGATCTGTATGATATCGATAAGAACGGCCTTATCTCTGCAAAGGAATTGCACTCTGTTCTCAAACGCCTCGGTGAAAAATGTAGCCTCAAAGATTGTTGCCGGATGATCAGTTCCGTCGACGTCGACGGTGATGGACATGTAAATTTCGAGGAATTCAAGAAGATGATGACTCGATCTTAG

Protein sequence

MGKKNSHSISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Homology
BLAST of HG10011250 vs. NCBI nr
Match: XP_038879983.1 (probable calcium-binding protein CML23 [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 6.4e-76
Identity = 150/156 (96.15%), Postives = 151/156 (96.79%), Query Frame = 0

Query: 3   KKNSHSISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIM 62
           K NS SISNP SSLGSMD+VIKVFNKFDKNGDGKISVNELGAAL ELGGKISTDEIRRIM
Sbjct: 4   KNNSLSISNPGSSLGSMDDVIKVFNKFDKNGDGKISVNELGAALSELGGKISTDEIRRIM 63

Query: 63  SEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 122
           SEIDKDGDGFIDLDEFAEFHQDASSSSG NKDLQDAFDLYDIDKNGLISAKELHSVLKRL
Sbjct: 64  SEIDKDGDGFIDLDEFAEFHQDASSSSGCNKDLQDAFDLYDIDKNGLISAKELHSVLKRL 123

Query: 123 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 124 GEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159

BLAST of HG10011250 vs. NCBI nr
Match: XP_022143269.1 (probable calcium-binding protein CML23 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 4.0e-70
Identity = 140/163 (85.89%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MGKKNSHSISNPVS-----SLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKIST 60
           M KK   S+S+P S     +LGSMDEV KVFNKFDKNGDGKISVNELG ALGELGGK+S+
Sbjct: 3   MAKK---SVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGKVSS 62

Query: 61  DEIRRIMSEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKEL 120
           DE+RRIM+EIDKDGDGFIDLDEFAEFHQD S++ GGNKDLQDAFDLYDIDKNGLISAKEL
Sbjct: 63  DEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKEL 122

Query: 121 HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 123 HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. NCBI nr
Match: XP_022948508.1 (probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 probable calcium-binding protein CML23 [Cucurbita pepo subsp. pepo] >KAG6607012.1 putative calcium-binding protein CML23, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036709.1 putative calcium-binding protein CML23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.1 bits (684), Expect = 4.9e-68
Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 0

Query: 8   SISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDK 67
           S  NP  +LGSMDEVI VF KFDKNGDGKIS+ EL AALGELGGKIS DEIRRIMSEIDK
Sbjct: 12  SSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKISDDEIRRIMSEIDK 71

Query: 68  DGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 127
           DG+GFIDLDEFAEFHQ++SS+ GG+KDLQDAFDLYD+DKNGLISAKELHSVLKRLGEKCS
Sbjct: 72  DGNGFIDLDEFAEFHQNSSSTGGGSKDLQDAFDLYDVDKNGLISAKELHSVLKRLGEKCS 131

Query: 128 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 132 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. NCBI nr
Match: XP_004145834.1 (probable calcium-binding protein CML23 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67
Identity = 139/159 (87.42%), Postives = 143/159 (89.94%), Query Frame = 0

Query: 1   MGKKNSHSISNPVSS-LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIR 60
           M K NS SIS P SS LGSMDE+I+VFNKFDKNGDGKISV EL AALGEL G ISTDEI 
Sbjct: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEIH 60

Query: 61  RIMSEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVL 120
           RIMSEIDKDGDGFIDLDEF +F    SSS+GGNKDLQDAFDLYDIDKNGLISAKELHSVL
Sbjct: 61  RIMSEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVL 120

Query: 121 KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

BLAST of HG10011250 vs. NCBI nr
Match: XP_022998716.1 (probable calcium-binding protein CML23 [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 3.2e-67
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0

Query: 8   SISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDK 67
           S  NP  +LGSMDEVI VF KFDKNGDGKIS+ EL AALGELGGKIS DEIRRIMSEIDK
Sbjct: 12  SSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKISDDEIRRIMSEIDK 71

Query: 68  DGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 127
           DG+GFIDLDEFAEFHQ+ SS+ GG+KDLQDAFDL+D+DKNGLISAKELHSVLKRLGEKCS
Sbjct: 72  DGNGFIDLDEFAEFHQNFSSTGGGSKDLQDAFDLFDVDKNGLISAKELHSVLKRLGEKCS 131

Query: 128 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 132 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 85/142 (59.86%), Postives = 108/142 (76.06%), Query Frame = 0

Query: 16  LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDL 75
           LGSM+++ KVF +FDKN DGKIS++EL   +G L    S +E + +M E D DG+GFIDL
Sbjct: 10  LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDL 69

Query: 76  DEFAEFHQ--DASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCR 135
           DEF    Q  D SS++   +DL++AFDLYD+D+NG ISA ELHSV+K LGEKCS++DC R
Sbjct: 70  DEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQR 129

Query: 136 MISSVDVDGDGHVNFEEFKKMM 156
           MI+ VD DGDG V+FEEFKKMM
Sbjct: 130 MINKVDSDGDGCVDFEEFKKMM 151

BLAST of HG10011250 vs. ExPASy Swiss-Prot
Match: P25070 (Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.3e-41
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 0

Query: 14  SSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFI 73
           S LGSMD++ KVF +FDKNGDGKISV+EL   +  L    S +E   +M + D DG+GFI
Sbjct: 10  SCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFI 69

Query: 74  DLDEFAEFHQDASSSSGGNK----DLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLK 133
           DLDEF    Q      G N+    DL++AF+LYD+D NG ISAKELHSV+K LGEKCS++
Sbjct: 70  DLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQ 129

Query: 134 DCCRMISSVDVDGDGHVNFEEFKKMMT 157
           DC +MIS VD+DGDG VNF+EFKKMM+
Sbjct: 130 DCKKMISKVDIDGDGCVNFDEFKKMMS 156

BLAST of HG10011250 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-38
Identity = 79/143 (55.24%), Postives = 105/143 (73.43%), Query Frame = 0

Query: 16  LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDL 75
           + + +E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+L
Sbjct: 18  MANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINL 77

Query: 76  DEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMI 135
           DEF+   + +SS++    +++DAFDLYD DKNGLISA ELH VL RLG  CS++DC RMI
Sbjct: 78  DEFSTLCRSSSSAA----EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMI 137

Query: 136 SSVDVDGDGHVNFEEFKKMMTRS 159
             VD DGDG+VNFEEF+KMMT S
Sbjct: 138 GPVDADGDGNVNFEEFQKMMTSS 156

BLAST of HG10011250 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 87/155 (56.13%), Postives = 104/155 (67.10%), Query Frame = 0

Query: 5   NSHSISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSE 64
           N+   S P   L   +EV  VFN+FD NGDGKIS +EL   L  LG   S +EI RIM E
Sbjct: 4   NTDRNSKPSVYLQEPNEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEE 63

Query: 65  IDKDGDGFIDLDEFAEF---HQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKR 124
           ID D DGFI++ EFA F     D   SSGG  +L++AF+LYD D NGLIS+ ELH +L R
Sbjct: 64  IDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTR 123

Query: 125 LGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 157
           LGE+ +  DC  MI SVD DGDG+V+FEEFKKMMT
Sbjct: 124 LGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMT 158

BLAST of HG10011250 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36
Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 0

Query: 19  MDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDLDEF 78
           M E+ +VF ++D NGDGKIS  EL + L  LG  +   E+RR+M E+D D DGF+DL EF
Sbjct: 3   MAELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

Query: 79  AEFHQDASSSSGG------------NKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKC 138
           A FH   + + GG              +L++AF +YD D NG ISA+ELH VL++LG+KC
Sbjct: 63  AAFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKC 122

Query: 139 SLKDCCRMISSVDVDGDGHVNFEEFKKMM 156
           S+ DC RMI SVD DGDG VNF+EFKKMM
Sbjct: 123 SVADCSRMIRSVDADGDGCVNFDEFKKMM 151

BLAST of HG10011250 vs. ExPASy TrEMBL
Match: A0A6J1CNU4 (probable calcium-binding protein CML23 OS=Momordica charantia OX=3673 GN=LOC111013180 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 140/163 (85.89%), Postives = 149/163 (91.41%), Query Frame = 0

Query: 1   MGKKNSHSISNPVS-----SLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKIST 60
           M KK   S+S+P S     +LGSMDEV KVFNKFDKNGDGKISVNELG ALGELGGK+S+
Sbjct: 3   MAKK---SVSDPSSTNLGGALGSMDEVTKVFNKFDKNGDGKISVNELGDALGELGGKVSS 62

Query: 61  DEIRRIMSEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKEL 120
           DE+RRIM+EIDKDGDGFIDLDEFAEFHQD S++ GGNKDLQDAFDLYDIDKNGLISAKEL
Sbjct: 63  DEVRRIMAEIDKDGDGFIDLDEFAEFHQDVSATGGGNKDLQDAFDLYDIDKNGLISAKEL 122

Query: 121 HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 123 HSVLKRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. ExPASy TrEMBL
Match: A0A6J1G9H5 (probable calcium-binding protein CML23 OS=Cucurbita moschata OX=3662 GN=LOC111452166 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.4e-68
Identity = 133/151 (88.08%), Postives = 141/151 (93.38%), Query Frame = 0

Query: 8   SISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDK 67
           S  NP  +LGSMDEVI VF KFDKNGDGKIS+ EL AALGELGGKIS DEIRRIMSEIDK
Sbjct: 12  SSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKISDDEIRRIMSEIDK 71

Query: 68  DGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 127
           DG+GFIDLDEFAEFHQ++SS+ GG+KDLQDAFDLYD+DKNGLISAKELHSVLKRLGEKCS
Sbjct: 72  DGNGFIDLDEFAEFHQNSSSTGGGSKDLQDAFDLYDVDKNGLISAKELHSVLKRLGEKCS 131

Query: 128 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 132 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. ExPASy TrEMBL
Match: A0A0A0LCM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.0e-68
Identity = 139/159 (87.42%), Postives = 143/159 (89.94%), Query Frame = 0

Query: 1   MGKKNSHSISNPVSS-LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIR 60
           M K NS SIS P SS LGSMDE+I+VFNKFDKNGDGKISV EL AALGEL G ISTDEI 
Sbjct: 1   MAKNNSLSISTPGSSALGSMDEIIRVFNKFDKNGDGKISVTELAAALGELSGNISTDEIH 60

Query: 61  RIMSEIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVL 120
           RIMSEIDKDGDGFIDLDEF +F    SSS+GGNKDLQDAFDLYDIDKNGLISAKELHSVL
Sbjct: 61  RIMSEIDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVL 120

Query: 121 KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 121 KRLGEKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 156

BLAST of HG10011250 vs. ExPASy TrEMBL
Match: A0A6J1KB05 (probable calcium-binding protein CML23 OS=Cucurbita maxima OX=3661 GN=LOC111493297 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 132/151 (87.42%), Postives = 140/151 (92.72%), Query Frame = 0

Query: 8   SISNPVSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDK 67
           S  NP  +LGSMDEVI VF KFDKNGDGKIS+ EL AALGELGGKIS DEIRRIMSEIDK
Sbjct: 12  SSPNPGGALGSMDEVIMVFKKFDKNGDGKISIKELAAALGELGGKISDDEIRRIMSEIDK 71

Query: 68  DGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCS 127
           DG+GFIDLDEFAEFHQ+ SS+ GG+KDLQDAFDL+D+DKNGLISAKELHSVLKRLGEKCS
Sbjct: 72  DGNGFIDLDEFAEFHQNFSSTGGGSKDLQDAFDLFDVDKNGLISAKELHSVLKRLGEKCS 131

Query: 128 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 132 LKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 162

BLAST of HG10011250 vs. ExPASy TrEMBL
Match: A0A5A7UHX3 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001160 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.9e-66
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0

Query: 6   SHSISNP-VSSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSE 65
           S SIS P  SSLGSMDEVI+VFNKFDKNGDGKISV+ELGAALGEL G IST EI RIMSE
Sbjct: 7   SLSISTPGSSSLGSMDEVIRVFNKFDKNGDGKISVSELGAALGELSGNISTGEIHRIMSE 66

Query: 66  IDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGE 125
           IDKDGDGFIDLDEF +F    SSS+GGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGE
Sbjct: 67  IDKDGDGFIDLDEFTDF---TSSSTGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGE 126

Query: 126 KCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 159
           KCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS
Sbjct: 127 KCSLKDCCRMISSVDVDGDGHVNFEEFKKMMTRS 157

BLAST of HG10011250 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 170.6 bits (431), Expect = 9.9e-43
Identity = 85/142 (59.86%), Postives = 108/142 (76.06%), Query Frame = 0

Query: 16  LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDL 75
           LGSM+++ KVF +FDKN DGKIS++EL   +G L    S +E + +M E D DG+GFIDL
Sbjct: 10  LGSMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDL 69

Query: 76  DEFAEFHQ--DASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCR 135
           DEF    Q  D SS++   +DL++AFDLYD+D+NG ISA ELHSV+K LGEKCS++DC R
Sbjct: 70  DEFVALFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQR 129

Query: 136 MISSVDVDGDGHVNFEEFKKMM 156
           MI+ VD DGDG V+FEEFKKMM
Sbjct: 130 MINKVDSDGDGCVDFEEFKKMM 151

BLAST of HG10011250 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 168.7 bits (426), Expect = 3.8e-42
Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 0

Query: 14  SSLGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFI 73
           S LGSMD++ KVF +FDKNGDGKISV+EL   +  L    S +E   +M + D DG+GFI
Sbjct: 10  SCLGSMDDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFI 69

Query: 74  DLDEFAEFHQDASSSSGGNK----DLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLK 133
           DLDEF    Q      G N+    DL++AF+LYD+D NG ISAKELHSV+K LGEKCS++
Sbjct: 70  DLDEFVALFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQ 129

Query: 134 DCCRMISSVDVDGDGHVNFEEFKKMMT 157
           DC +MIS VD+DGDG VNF+EFKKMM+
Sbjct: 130 DCKKMISKVDIDGDGCVNFDEFKKMMS 156

BLAST of HG10011250 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 79/143 (55.24%), Postives = 105/143 (73.43%), Query Frame = 0

Query: 16  LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDL 75
           + + +E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+L
Sbjct: 18  MANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINL 77

Query: 76  DEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMI 135
           DEF+   + +SS++    +++DAFDLYD DKNGLISA ELH VL RLG  CS++DC RMI
Sbjct: 78  DEFSTLCRSSSSAA----EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMI 137

Query: 136 SSVDVDGDGHVNFEEFKKMMTRS 159
             VD DGDG+VNFEEF+KMMT S
Sbjct: 138 GPVDADGDGNVNFEEFQKMMTSS 156

BLAST of HG10011250 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 79/143 (55.24%), Postives = 105/143 (73.43%), Query Frame = 0

Query: 16  LGSMDEVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMSEIDKDGDGFIDL 75
           + + +E+ KVF++FD NGDGKISV ELG     +G   +  E+ R++ E+D D DG+I+L
Sbjct: 18  MANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINL 77

Query: 76  DEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLGEKCSLKDCCRMI 135
           DEF+   + +SS++    +++DAFDLYD DKNGLISA ELH VL RLG  CS++DC RMI
Sbjct: 78  DEFSTLCRSSSSAA----EIRDAFDLYDQDKNGLISASELHQVLNRLGMSCSVEDCTRMI 137

Query: 136 SSVDVDGDGHVNFEEFKKMMTRS 159
             VD DGDG+VNFEEF+KMMT S
Sbjct: 138 GPVDADGDGNVNFEEFQKMMTSS 156

BLAST of HG10011250 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36
Identity = 80/153 (52.29%), Postives = 109/153 (71.24%), Query Frame = 0

Query: 5   NSHSISNPVSSLGSMD-EVIKVFNKFDKNGDGKISVNELGAALGELGGKISTDEIRRIMS 64
           N++  S   S+  S D E+ KVF+KFD NGDGKISV+ELG     +G   + +E+ R++ 
Sbjct: 3   NTNLESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLD 62

Query: 65  EIDKDGDGFIDLDEFAEFHQDASSSSGGNKDLQDAFDLYDIDKNGLISAKELHSVLKRLG 124
           EID D DGFI+ +EFA   + +SS+     ++++AFDLYD +KNGLIS+ E+H VL RLG
Sbjct: 63  EIDIDCDGFINQEEFATICRSSSSA----VEIREAFDLYDQNKNGLISSSEIHKVLNRLG 122

Query: 125 EKCSLKDCCRMISSVDVDGDGHVNFEEFKKMMT 157
             CS++DC RMI  VD DGDG+VNFEEF+KMM+
Sbjct: 123 MTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMS 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038879983.16.4e-7696.15probable calcium-binding protein CML23 [Benincasa hispida][more]
XP_022143269.14.0e-7085.89probable calcium-binding protein CML23 [Momordica charantia][more]
XP_022948508.14.9e-6888.08probable calcium-binding protein CML23 [Cucurbita moschata] >XP_023524703.1 prob... [more]
XP_004145834.11.9e-6787.42probable calcium-binding protein CML23 [Cucumis sativus][more]
XP_022998716.13.2e-6787.42probable calcium-binding protein CML23 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9C8Y11.4e-4159.86Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ... [more]
P250705.3e-4158.50Calcium-binding protein CML24 OS=Arabidopsis thaliana OX=3702 GN=CML24 PE=2 SV=2[more]
Q9LE222.5e-3855.24Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ... [more]
Q9M7R01.2e-3756.13Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1[more]
Q0DJV61.3e-3652.35Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Match NameE-valueIdentityDescription
A0A6J1CNU41.9e-7085.89probable calcium-binding protein CML23 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1G9H52.4e-6888.08probable calcium-binding protein CML23 OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A0A0LCM19.0e-6887.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G319280 PE=4 SV=1[more]
A0A6J1KB051.5e-6787.42probable calcium-binding protein CML23 OS=Cucurbita maxima OX=3661 GN=LOC1114932... [more]
A0A5A7UHX32.9e-6688.96Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
Match NameE-valueIdentityDescription
AT1G66400.19.9e-4359.86calmodulin like 23 [more]
AT5G37770.13.8e-4258.50EF hand calcium-binding protein family [more]
AT1G18210.11.7e-3955.24Calcium-binding EF-hand family protein [more]
AT1G18210.21.7e-3955.24Calcium-binding EF-hand family protein [more]
AT1G73630.11.4e-3652.29EF hand calcium-binding protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 57..85
e-value: 8.1E-5
score: 32.0
coord: 130..158
e-value: 2.1E-4
score: 30.6
coord: 94..122
e-value: 3.2E-5
score: 33.4
coord: 21..49
e-value: 3.0E-6
score: 36.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 93..155
e-value: 1.0E-11
score: 45.1
coord: 24..81
e-value: 1.9E-14
score: 53.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 90..125
score: 14.318138
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 17..52
score: 15.88028
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 53..88
score: 14.06708
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 126..158
score: 13.174425
IPR002048EF-hand domainCDDcd00051EFhcoord: 21..83
e-value: 9.28883E-19
score: 73.3509
IPR002048EF-hand domainCDDcd00051EFhcoord: 94..156
e-value: 1.19092E-18
score: 72.9657
NoneNo IPR availableGENE3D1.10.238.10coord: 92..158
e-value: 2.2E-22
score: 81.1
NoneNo IPR availableGENE3D1.10.238.10coord: 3..91
e-value: 4.7E-22
score: 80.9
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 14..157
NoneNo IPR availablePANTHERPTHR10891:SF794CALCIUM-BINDING PROTEIN CML23-RELATEDcoord: 14..157
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 66..78
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 103..115
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 30..42
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 139..151
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 18..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011250.1HG10011250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding