HG10011109 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10011109
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RNF126 isoform X2
LocationChr01: 2527019 .. 2527924 (-)
RNA-Seq ExpressionHG10011109
SyntenyHG10011109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGAGTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTACTGGTGCCGAATTTGTCGAAGAATTATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGTCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCAATTTAGCTGCTGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCTGTGGGGATTCGAAGCCGATGAGTCTTGGATCACGCTCCGATTCTCCAGACCAGAGGCCAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGAGGTATCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGGGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTACCATTCGGATTGTGTTGTTCCTTGGTTGAGGATCCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGTCGCTGCTGACGGCGAGGGGAGTGGGAGTGGTTTTAATGGCGGAATGGTTGAGGAATTAGGAGAAGAAGAAGGAGATGGAGAAGGAAGAGGGAATGGAGGGTGGTGGAACTTGGTGTGTTGTTGGTGGCCACTCCGTTTAATCGCCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCATCGTTGAACGTAAGATTTTTTATTTTGAAGTTTCTTCATCTATGGATGAAGTTAGGAAGAAAAGAAAAAACTATTTTTTTGATGATCAAAATGAATGGTTGAAATTATTACAAATTACAATTAGGTTAATTTACACCTTTAGGATTTTGGCCCTGAAACTTTCAAAATTACAAATTTAA

mRNA sequence

ATGTCAATGAGTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTACTGGTGCCGAATTTGTCGAAGAATTATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGTCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCAATTTAGCTGCTGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCTGTGGGGATTCGAAGCCGATGAGTCTTGGATCACGCTCCGATTCTCCAGACCAGAGGCCAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGAGGTATCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGGGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTACCATTCGGATTGTGTTGTTCCTTGGTTGAGGATCCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGTCGCTGCTGACGGCGAGGGGAGTGGGAGTGGTTTTAATGGCGGAATGGTTGAGGAATTAGGAGAAGAAGAAGGAGATGGAGAAGGAAGAGGGAATGGAGGGTGGTGGAACTTGGTGTGTTGTTGGTGGCCACTCCGTTTAATCGCCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCATCGTTGAACGTAAGATTTTTTATTTTGAAGTTTCTTCATCTATGGATGAAGTTAGGAAGAAAAGAAAAAACTATTTTTTTGATGATCAAAATGAATGGTTGAAATTATTACAAATTACAATTAGGTTAATTTACACCTTTAGGATTTTGGCCCTGAAACTTTCAAAATTACAAATTTAA

Coding sequence (CDS)

ATGTCAATGAGTCAAAACCCTCGACCTCGAATCGTCGTCAATGGCGGCTTCCCGAGGACGACCACCATGCATTACTACTGGTGCCGAATTTGTCGAAGAATTATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCTTTTTGCTCCAGAAATCTCCGTCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCAATTTAGCTGCTGGAAATCGCACGATTTCCCCCCCGATTGTCCCTCTGTGGGGATTCGAAGCCGATGAGTCTTGGATCACGCTCCGATTCTCCAGACCAGAGGCCAATTCCGGGATTGAGGCGATTCCGAGGGTGAAAATTACGAGGTATCATTTGGAGAAGGATTCGAATTGTGCGATTTGTAAAGAGGAATTTGAAATGGGAGGGGAAGTAAGGGAGTTGCCTTGCAAGCATTTCTACCATTCGGATTGTGTTGTTCCTTGGTTGAGGATCCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGTCGCTGCTGACGGCGAGGGGAGTGGGAGTGGTTTTAATGGCGGAATGGTTGAGGAATTAGGAGAAGAAGAAGGAGATGGAGAAGGAAGAGGGAATGGAGGGTGGTGGAACTTGGTGTGTTGTTGGTGGCCACTCCGTTTAATCGCCGATTGGGCTCGCCGCCTCCGGTTTGCTGATTCCGGTGATAGTTTCTTCATCGTTGAACGTAAGATTTTTTATTTTGAAGTTTCTTCATCTATGGATGAAGTTAGGAAGAAAAGAAAAAACTATTTTTTTGATGATCAAAATGAATGGTTGAAATTATTACAAATTACAATTAGGTTAATTTACACCTTTAGGATTTTGGCCCTGAAACTTTCAAAATTACAAATTTAA

Protein sequence

MSMSQNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPNLAAGNRTISPPIVPLWGFEADESWITLRFSRPEANSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGEGSGSGFNGGMVEELGEEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSGDSFFIVERKIFYFEVSSSMDEVRKKRKNYFFDDQNEWLKLLQITIRLIYTFRILALKLSKLQI
Homology
BLAST of HG10011109 vs. NCBI nr
Match: XP_038891846.1 (probable E3 ubiquitin-protein ligase RHC1A isoform X2 [Benincasa hispida])

HSP 1 Score: 450.3 bits (1157), Expect = 1.3e-122
Identity = 210/251 (83.67%), Postives = 221/251 (88.05%), Query Frame = 0

Query: 1   MSMSQNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHEL 60
           MSM QNPR RIV+NGG PRTTTMHYYWCRICRRIIRISLGNP+E SITCPFCSRNLRHEL
Sbjct: 1   MSMPQNPRSRIVINGGVPRTTTMHYYWCRICRRIIRISLGNPVENSITCPFCSRNLRHEL 60

Query: 61  DVARARNFPRLPNLAAGNRTISPPIVPLWGFEADESWITLRFSRPEANSGIEAIPRVKIT 120
           DVARARNFPRLP+ A GNRTISPPI+P +  E DESWITLRFSRP ANSGIEAIPRVKIT
Sbjct: 61  DVARARNFPRLPSFATGNRTISPPIIPRFE-ETDESWITLRFSRPPANSGIEAIPRVKIT 120

Query: 121 RYHLEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAA 180
             HLEKD NCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCR+T+ENI A 
Sbjct: 121 GNHLEKDLNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRHTVENIAAG 180

Query: 181 DGEGSGSGFNGGMVEEL-GEEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSGD 240
           D EGSG+G NGG  EE+  EEEG GEGRGN GWW+LVCCWWP R I DWARRLRFADSGD
Sbjct: 181 DDEGSGNGINGGRGEEIREEEEGGGEGRGN-GWWDLVCCWWPFRFIGDWARRLRFADSGD 240

Query: 241 SFFIVERKIFY 251
           SFF+VER   Y
Sbjct: 241 SFFVVERSWMY 249

BLAST of HG10011109 vs. NCBI nr
Match: XP_038891839.1 (probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Benincasa hispida])

HSP 1 Score: 447.6 bits (1150), Expect = 8.6e-122
Identity = 208/246 (84.55%), Postives = 219/246 (89.02%), Query Frame = 0

Query: 1   MSMSQNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHEL 60
           MSM QNPR RIV+NGG PRTTTMHYYWCRICRRIIRISLGNP+E SITCPFCSRNLRHEL
Sbjct: 1   MSMPQNPRSRIVINGGVPRTTTMHYYWCRICRRIIRISLGNPVENSITCPFCSRNLRHEL 60

Query: 61  DVARARNFPRLPNLAAGNRTISPPIVPLWGFEADESWITLRFSRPEANSGIEAIPRVKIT 120
           DVARARNFPRLP+ A GNRTISPPI+P +  E DESWITLRFSRP ANSGIEAIPRVKIT
Sbjct: 61  DVARARNFPRLPSFATGNRTISPPIIPRFE-ETDESWITLRFSRPPANSGIEAIPRVKIT 120

Query: 121 RYHLEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAA 180
             HLEKD NCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCR+T+ENI A 
Sbjct: 121 GNHLEKDLNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRHTVENIAAG 180

Query: 181 DGEGSGSGFNGGMVEEL-GEEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSGD 240
           D EGSG+G NGG  EE+  EEEG GEGRGN GWW+LVCCWWP R I DWARRLRFADSGD
Sbjct: 181 DDEGSGNGINGGRGEEIREEEEGGGEGRGN-GWWDLVCCWWPFRFIGDWARRLRFADSGD 240

Query: 241 SFFIVE 246
           SFF+VE
Sbjct: 241 SFFVVE 244

BLAST of HG10011109 vs. NCBI nr
Match: XP_008456082.1 (PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo])

HSP 1 Score: 427.9 bits (1099), Expect = 7.0e-116
Identity = 206/247 (83.40%), Postives = 211/247 (85.43%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-----EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSG 244
           GSGSGFNGG  EELG     EEEG+GEGRGN GWWNLVCCWWPLRLI DWARRLRFADSG
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEGEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFADSG 242

Query: 245 DSFFIVE 246
           DSFF+VE
Sbjct: 247 DSFFVVE 242

BLAST of HG10011109 vs. NCBI nr
Match: TYJ99740.1 (E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 7.0e-116
Identity = 207/251 (82.47%), Postives = 212/251 (84.46%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-------EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFAD 244
           GSGSGFNGG  EELG       EEE +GEGRGN GWWNLVCCWWPLRLI DWARRLRFAD
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEEEEEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFAD 246

Query: 245 SGDSFFIVERK 248
           SGDSFF+VERK
Sbjct: 247 SGDSFFVVERK 246

BLAST of HG10011109 vs. NCBI nr
Match: KAA0039066.1 (E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 424.1 bits (1089), Expect = 1.0e-114
Identity = 205/249 (82.33%), Postives = 210/249 (84.34%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-------EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFAD 244
           GSGSGFNGG  EELG       EEE +GEGRGN GWWNLVCCWWPLRLI DWARRLRFAD
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEEEEEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFAD 244

Query: 245 SGDSFFIVE 246
           SGDSFF+VE
Sbjct: 247 SGDSFFVVE 244

BLAST of HG10011109 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.7e-22
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 91  FEADESWITLRFSRPEANSGIEAIPRVKITRYHL-EKDSNCAICKEEFEMGGEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTL 175
           H YHSDC+VPWL  HN+CPVCR  L
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of HG10011109 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.8e-21
Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 0

Query: 92  EADESWITLRFSRPEANSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRELPCKHF 151
           EA  + I    + P + S IE++PRV+I+  H + ++NCA+C E FE G E RE+PCKH 
Sbjct: 177 EASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHI 236

Query: 152 YHSDCVVPWLRIHNTCPVCRYTL 175
           +H DC+VPWL I N+CPVCR+ L
Sbjct: 237 FHGDCIVPWLSIRNSCPVCRFEL 259

BLAST of HG10011109 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 0

Query: 92  EADESWITLRFSRPEANSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRELPCKHF 151
           EA  + I    + P + S IE++PRV+I+  H+  ++NCA+C E FE   E RE+PCKH 
Sbjct: 161 EASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHL 220

Query: 152 YHSDCVVPWLRIHNTCPVCRYTL 175
           +H DC+VPWL I N+CPVCR+ L
Sbjct: 221 FHDDCIVPWLSIRNSCPVCRFEL 243

BLAST of HG10011109 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-19
Identity = 49/120 (40.83%), Postives = 66/120 (55.00%), Query Frame = 0

Query: 105 PEANSGIEAIPRVKITRYHLE-KDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRI 164
           P   S I+A+P +KIT+ HL+  DS+C +CK+EFE+  E +++PC H YHSDC+VPWL  
Sbjct: 160 PAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQ 219

Query: 165 HNTCPVCRYTLENIVAADGEGSGSGFNGGMVEELGEEEGDGEGRGNGGWWNLVCCWWPLR 224
           HN+CPVCR  L +       GS S            +     GR N    N+    WP R
Sbjct: 220 HNSCPVCRKELPS------RGSSSSTQ-------SSQNRSTNGRENSRRRNIFSNLWPFR 266

BLAST of HG10011109 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.9e-19
Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 0

Query: 105 PEANSGIEAIPRVKITRYHLEKDSN-CAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRI 164
           P + S I+A+P VK+T+  L+ + N CA+C +EFE G +V+++PCKH +H DC++PWL +
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 165 HNTCPVCRYTL-------ENIV-----AADGEGSGSG-----FNGGMVEELGEEEGDGEG 212
           HN+CPVCR+ L       EN       + DG+GS  G     F+  +      ++G G G
Sbjct: 250 HNSCPVCRFELPTDDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFRRQDGSGSG 309

BLAST of HG10011109 vs. ExPASy TrEMBL
Match: A0A5D3BIU8 (E3 ubiquitin-protein ligase RNF126 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00160 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 207/251 (82.47%), Postives = 212/251 (84.46%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-------EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFAD 244
           GSGSGFNGG  EELG       EEE +GEGRGN GWWNLVCCWWPLRLI DWARRLRFAD
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEEEEEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFAD 246

Query: 245 SGDSFFIVERK 248
           SGDSFF+VERK
Sbjct: 247 SGDSFFVVERK 246

BLAST of HG10011109 vs. ExPASy TrEMBL
Match: A0A1S3C2I0 (uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 206/247 (83.40%), Postives = 211/247 (85.43%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-----EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSG 244
           GSGSGFNGG  EELG     EEEG+GEGRGN GWWNLVCCWWPLRLI DWARRLRFADSG
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEGEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFADSG 242

Query: 245 DSFFIVE 246
           DSFF+VE
Sbjct: 247 DSFFVVE 242

BLAST of HG10011109 vs. ExPASy TrEMBL
Match: A0A5A7TAK0 (E3 ubiquitin-protein ligase RNF126 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001620 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.9e-115
Identity = 205/249 (82.33%), Postives = 210/249 (84.34%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR RIVVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGFE-ADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGFE  DESWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------PISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCVVPWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEELG-------EEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFAD 244
           GSGSGFNGG  EELG       EEE +GEGRGN GWWNLVCCWWPLRLI DWARRLRFAD
Sbjct: 187 GSGSGFNGGRGEELGEEEEEEEEEEEEGEGRGN-GWWNLVCCWWPLRLIGDWARRLRFAD 244

Query: 245 SGDSFFIVE 246
           SGDSFF+VE
Sbjct: 247 SGDSFFVVE 244

BLAST of HG10011109 vs. ExPASy TrEMBL
Match: A0A0A0LC10 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 1.0e-112
Identity = 199/245 (81.22%), Postives = 206/245 (84.08%), Query Frame = 0

Query: 5   QNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 64
           QNPR R+VVNGGF RTT MHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR
Sbjct: 7   QNPRSRVVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVAR 66

Query: 65  ARNFPRLPNLAAGNRTISPPIVPLWGF-EADESWITLRFSRPEANSGIEAIPRVKITRYH 124
           ARNFPRLP        ISPPIV  WGF E D SWITL+F RP  NSGIE IPRV+IT  H
Sbjct: 67  ARNFPRLP-------AISPPIVQRWGFEETDASWITLQFPRPAVNSGIEEIPRVRITGKH 126

Query: 125 LEKDSNCAICKEEFEMGGEVRELPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGE 184
           LEKDSNCAICKEEFEMG EVRELPCKHFYHSDCV+PWLR+HNTCPVCRYTLENI     E
Sbjct: 127 LEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVIPWLRMHNTCPVCRYTLENI---GDE 186

Query: 185 GSGSGFNGGMVEEL-GEEEGDGEGRGNGGWWNLVCCWWPLRLIADWARRLRFADSGDSFF 244
           GSGSGFNGG  EE   EEE +GE RGN GWWNLVCCWWP RL+ DWARRLRFADSGDSFF
Sbjct: 187 GSGSGFNGGRGEEFREEEEEEGERRGN-GWWNLVCCWWPFRLVGDWARRLRFADSGDSFF 240

Query: 245 IVERK 248
            VERK
Sbjct: 247 AVERK 240

BLAST of HG10011109 vs. ExPASy TrEMBL
Match: A0A6J1D6G1 (probable E3 ubiquitin-protein ligase RHC1A isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017708 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 7.4e-87
Identity = 169/276 (61.23%), Postives = 187/276 (67.75%), Query Frame = 0

Query: 3   MSQNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDV 62
           MSQN RPRI +NGG  RTTT+HYYWCRICRRIIRIS GNPLEISI+CPFCSR LRHELDV
Sbjct: 1   MSQNLRPRIAINGGVHRTTTLHYYWCRICRRIIRISFGNPLEISISCPFCSRLLRHELDV 60

Query: 63  ARAR----------NFPRLPNLAAGNRTISPPIVPLWGFEAD-----ESWITLRFSRPEA 122
           ARAR          N  RLP+     R  S   +PLWGFE D     ESWITL+FSRP A
Sbjct: 61  ARARFHADPSGFLPNSSRLPD----PRPDSRRNLPLWGFEIDDGPSPESWITLQFSRPRA 120

Query: 123 -------------NSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRELPCKHFYHS 182
                        + GIEAIPRVKIT YHL KDS C ICKEEF +GGE RELPCKHFYHS
Sbjct: 121 LPESSDAPPDSRQDCGIEAIPRVKITEYHLGKDSICPICKEEFRIGGEARELPCKHFYHS 180

Query: 183 DCVVPWLRIHNTCPVCRYTLENIVAADGEGSGSGFNGGMVEELGEEEGDGEGRGNGGWWN 242
           DC+VPWLR+ NTCPVCR+TL+NI  A    +     G  VEE       G GR N GWW+
Sbjct: 181 DCIVPWLRLRNTCPVCRHTLQNIPVAVAVAAA----GTFVEE-------GGGRWN-GWWS 240

Query: 243 LVCCWWPLRLIADWARRLRFADSGDSFFIVERKIFY 251
            +C WWP R I  WARRLR+ADSGDSFF++E    Y
Sbjct: 241 SICSWWPFRSIGGWARRLRYADSGDSFFVIEHSWMY 260

BLAST of HG10011109 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 7.7e-36
Identity = 96/267 (35.96%), Postives = 122/267 (45.69%), Query Frame = 0

Query: 3   MSQNPRPRIVVNGGFPRTTTMHYYWCRICRRIIRI---SLGNPLEISITCPFCSR--NLR 62
           M+   RPR++VN G  RT T HY++CR C R IR+    L  P+     CPFCSR  NL 
Sbjct: 1   MTSAYRPRVIVN-GTRRTRTFHYFYCRHCSRTIRLRSFGLYGPI-----CPFCSREINLH 60

Query: 63  HELDVARARNFPRLPNLAAGNRTISPPIVPLWGFEADESWITL---------RFSR---- 122
            ELD+ R                   P  P W  ++D  WITL         RF+     
Sbjct: 61  DELDIMR-------------------PSRPYW--DSDTDWITLHLINEPRSNRFNHDDLV 120

Query: 123 -------------------PEANSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRE 182
                              P + S IEA+  V IT   L K+  CAICKEEFE+G E +E
Sbjct: 121 YNTDEEFADVMPSVQIGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKE 180

Query: 183 LPCKHFYHSDCVVPWLRIHNTCPVCRYTLENIVAADGEGSGSGFNGGMVEELGEEEGDGE 233
           L C H YHS C+V WL IHNTCP+CR+ +   V+      G  +N          + D  
Sbjct: 181 LKCLHLYHSSCIVSWLNIHNTCPICRFEVNLGVSESNVDEGGSYN---------IDNDRS 227

BLAST of HG10011109 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 91  FEADESWITLRFSRPEANSGIEAIPRVKITRYHL-EKDSNCAICKEEFEMGGEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTL 175
           H YHSDC+VPWL  HN+CPVCR  L
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of HG10011109 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 91  FEADESWITLRFSRPEANSGIEAIPRVKITRYHL-EKDSNCAICKEEFEMGGEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTL 175
           H YHSDC+VPWL  HN+CPVCR  L
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of HG10011109 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 91  FEADESWITLRFSRPEANSGIEAIPRVKITRYHL-EKDSNCAICKEEFEMGGEVRELPCK 150
           FE   +  T R   P   S I+A+P +KI + HL   DSNC +CK+EFE+G E +++PC 
Sbjct: 150 FEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCN 209

Query: 151 HFYHSDCVVPWLRIHNTCPVCRYTL 175
           H YHSDC+VPWL  HN+CPVCR  L
Sbjct: 210 HIYHSDCIVPWLVQHNSCPVCRQEL 234

BLAST of HG10011109 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-22
Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 0

Query: 92  EADESWITLRFSRPEANSGIEAIPRVKITRYHLEKDSNCAICKEEFEMGGEVRELPCKHF 151
           EA  + I    + P + S IE++PRV+I+  H + ++NCA+C E FE G E RE+PCKH 
Sbjct: 177 EASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHI 236

Query: 152 YHSDCVVPWLRIHNTCPVCRYTL 175
           +H DC+VPWL I N+CPVCR+ L
Sbjct: 237 FHGDCIVPWLSIRNSCPVCRFEL 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891846.11.3e-12283.67probable E3 ubiquitin-protein ligase RHC1A isoform X2 [Benincasa hispida][more]
XP_038891839.18.6e-12284.55probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Benincasa hispida][more]
XP_008456082.17.0e-11683.40PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo][more]
TYJ99740.17.0e-11682.47E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis melo var. makuwa][more]
KAA0039066.11.0e-11482.33E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
O221974.7e-2251.76Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q9SNB66.8e-2150.60E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ... [more]
Q940T51.2e-2049.40E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ... [more]
Q94AK41.7e-1940.83E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
Q8LPN74.9e-1939.20E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
Match NameE-valueIdentityDescription
A0A5D3BIU83.4e-11682.47E3 ubiquitin-protein ligase RNF126 isoform X2 OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3C2I03.4e-11683.40uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=... [more]
A0A5A7TAK04.9e-11582.33E3 ubiquitin-protein ligase RNF126 isoform X1 OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0LC101.0e-11281.22RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 P... [more]
A0A6J1D6G17.4e-8761.23probable E3 ubiquitin-protein ligase RHC1A isoform X3 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT1G68180.17.7e-3635.96RING/U-box superfamily protein [more]
AT2G40830.23.3e-2351.76RING-H2 finger C1A [more]
AT2G40830.13.3e-2351.76RING-H2 finger C1A [more]
AT2G40830.33.3e-2351.76RING-H2 finger C1A [more]
AT3G46620.14.8e-2250.60zinc finger (C3HC4-type RING finger) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 130..170
e-value: 3.8E-7
score: 39.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 129..171
e-value: 2.3E-12
score: 47.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 130..171
score: 12.25323
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 98..177
e-value: 2.2E-21
score: 77.3
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 24..228
NoneNo IPR availablePANTHERPTHR15710:SF116ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEINcoord: 24..228
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 130..171
e-value: 1.1943E-23
score: 88.914
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 111..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10011109.1HG10011109.1mRNA