HG10011095 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10011095
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	importin-4-like
Location	Chr01: 2414225 .. 2415810 (-)
RNA-Seq Expression	HG10011095
Synteny	HG10011095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTGGTTCTCAAAGAATTGGTGTCGTCAGAGGCAACTAATAGAAGGAATGCTGCATTTTGTGTTGGAGAGTTCTGCAAGAATGGGGGGGAGTCTACTTTGAAGTATCCTTGTCAATGCAATTATATTGATTTATTTACTTTCATCTCTTACTATCGTCTTGATAGTTTTAAAGCTGTTGTGTTGCCTGCCTAGGAACCTAATATTTTTATAATGTACTGATCATATGCTTATATTTTATTTTTCACATTCAACTTTTTGCTTTGAACTTTCTTTATAATCAACACCACCCTTTTTCTTAATCAATATCAGATATTATAATGATATATTTCGTGGACTCTACCCATTATTTGGGGAATCTGAGTCAGACAATGCTGTTAGGGATAATGCAGCTGGTGCAGTCGCAAGAATGATAATGGTGCACCCTGAAGCTGTCCCATTGAATCAGGTTAGTTTATCTTTGGTTACCCTTCCCTCCCCCCAGTTTTCTTCCTTCTGTATATGTAGGTCCTGGCTTAACTGTTTTATTTTGATCTTGTTTCTAGGTCCTCCAAGTTTTTCTGAAAGCTCTACCCTTAAAAGAAGATCACGAGGAGTCCATGTCCGTCTATGGTTGTGTGTCTACTCTTGTTTTGTCATCTAATCCTCAGGTATTTGTTCTGTTGGTCTTTAGCATGAATTTTGAAAATGCTTATTTATGGAGGGAATAGTTTTGTTTTTGGAGATAATTCAGGAATACACACTTTTTGTTGGCCACCCAATTACATTGTGAGGATAACTAGGAAACATTTGATCCTGCAATTGATTGTTACGGAAATTCATACCATATTGCCCCAAGTCTCCCATAGTGCACAGTAACACTGGGGGAAAGGTTTTTGTGCGCGAGGGACATTATGCATAAGTAACATACCCTTAGTGCATTTTGACAATGACAGAAGGACATATTTCATTATTTTCCAAAATTTAGGGCAAACGCCATTACAAATTCCAAAATTTAGGTCATCTGTACAAAAAACGTTGGTGGAAAAATGTTCATTTTTATTAAAATTTTACTGATATTTTCCCAGTTCATGTATCCAACATTTGGGGAAGTCTTCATAAACCTTTTACTTGATCTATGTTATAGGACCCAAATTGTATATGTATTGGACAACATGGGGAAGAAGTTTAGTGCCCTAATTAAACCTCAATGCCTAACACAATGTTTAAACGAGTAAGTTAGGGAGGGTATGAAACAGGAAATTGAGGAGAAAAAGCAAATAAATATTAATTGGAGGGCTAATTGATTTTGAGATGAACTAGAAGGCCCAAACTAAGTTTGTTCAGTATTAAAAACGAAATCTGGTTGAATATAGTTCTGCTAATTAGTGTGCCAATTGCAGATCCTTTCTTTGGTTCCGGAGTTGGTTAATATCTTTGCTCATGTTGTGGCATCGCCTATCGAAACGTCAGAAGTTAAGGCTCAAGTAGGCAGAGCTTTCTCTCATCTACTTTCACTCTATGGCCAACAAATGCAACCACTTTTGAGCAGTCTCCCACCTGCACATGCAAATGCCTTAGCTGCATATGCCCCTAAATGCTAA

mRNA sequence

ATGCCTTTGGTTCTCAAAGAATTGGTGTCGTCAGAGGCAACTAATAGAAGGAATGCTGCATTTTGTGTTGGAGAGTTCTGCAAGAATGGGGGGGAGTCTACTTTGAAATATTATAATGATATATTTCGTGGACTCTACCCATTATTTGGGGAATCTGAGTCAGACAATGCTGTTAGGGATAATGCAGCTGGTGCAGTCGCAAGAATGATAATGGTGCACCCTGAAGCTGTCCCATTGAATCAGGTCCTCCAAGTTTTTCTGAAAGCTCTACCCTTAAAAGAAGATCACGAGGAGTCCATGTCCGTCTATGGTTGTGTGTCTACTCTTGTTTTGTCATCTAATCCTCAGATCCTTTCTTTGGTTCCGGAGTTGGTTAATATCTTTGCTCATGTTGTGGCATCGCCTATCGAAACGTCAGAAGTTAAGGCTCAAGTAGGCAGAGCTTTCTCTCATCTACTTTCACTCTATGGCCAACAAATGCAACCACTTTTGAGCAGTCTCCCACCTGCACATGCAAATGCCTTAGCTGCATATGCCCCTAAATGCTAA

Coding sequence (CDS)

ATGCCTTTGGTTCTCAAAGAATTGGTGTCGTCAGAGGCAACTAATAGAAGGAATGCTGCATTTTGTGTTGGAGAGTTCTGCAAGAATGGGGGGGAGTCTACTTTGAAATATTATAATGATATATTTCGTGGACTCTACCCATTATTTGGGGAATCTGAGTCAGACAATGCTGTTAGGGATAATGCAGCTGGTGCAGTCGCAAGAATGATAATGGTGCACCCTGAAGCTGTCCCATTGAATCAGGTCCTCCAAGTTTTTCTGAAAGCTCTACCCTTAAAAGAAGATCACGAGGAGTCCATGTCCGTCTATGGTTGTGTGTCTACTCTTGTTTTGTCATCTAATCCTCAGATCCTTTCTTTGGTTCCGGAGTTGGTTAATATCTTTGCTCATGTTGTGGCATCGCCTATCGAAACGTCAGAAGTTAAGGCTCAAGTAGGCAGAGCTTTCTCTCATCTACTTTCACTCTATGGCCAACAAATGCAACCACTTTTGAGCAGTCTCCCACCTGCACATGCAAATGCCTTAGCTGCATATGCCCCTAAATGCTAA

Protein sequence

MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRDNAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSLVPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAPKC

Homology

[Close]

BLAST of HG10011095 vs. NCBI nr
Match: XP_038897499.1 (importin-4 [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 2.7e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 867  MPLVLKELASSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 926

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 927  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 986

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLS+LPPAHANALAAYAP
Sbjct: 987  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSNLPPAHANALAAYAP 1046

Query: 181  KC 183
            KC
Sbjct: 1047 KC 1048

[Close]

BLAST of HG10011095 vs. NCBI nr
Match: TYJ99765.1 (importin-4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 826  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 885

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 886  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 945

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 946  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1005

Query: 181  KC 183
            KC
Sbjct: 1006 KC 1007

[Close]

BLAST of HG10011095 vs. NCBI nr
Match: KAA0039026.1 (importin-4 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 864  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 923

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 924  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 983

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 984  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1043

Query: 181  KC 183
            KC
Sbjct: 1044 KC 1045

[Close]

BLAST of HG10011095 vs. NCBI nr
Match: XP_008456074.1 (PREDICTED: importin-4 isoform X1 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 865  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 924

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 925  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 984

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 985  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1044

Query: 181  KC 183
            KC
Sbjct: 1045 KC 1046

[Close]

BLAST of HG10011095 vs. NCBI nr
Match: XP_004146264.1 (importin-4 [Cucumis sativus] >KGN57585.1 hypothetical protein Csa_009977 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 7.8e-94
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 865  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 924

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 925  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 984

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLS+LPPAHANALAAYAP
Sbjct: 985  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSNLPPAHANALAAYAP 1044

Query: 181  KC 183
            KC
Sbjct: 1045 KC 1046

[Close]

BLAST of HG10011095 vs. ExPASy Swiss-Prot
Match: Q8TEX9 (Importin-4 OS=Homo sapiens OX=9606 GN=IPO4 PE=1 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 58/177 (32.77%), Postives = 88/177 (49.72%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            +P++L     ++   R NA F +G   ++GG    +++  +   L+PL      D  VRD
Sbjct: 901  LPVLLSTAQEADPEVRSNAIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLARERHDR-VRD 960

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            N  GA+AR++M  P   P  QVL   L ALPLKED EE +++    S L  SS  Q++ +
Sbjct: 961  NICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSSPDQVIDV 1020

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAA 178
             PEL+ I + ++A      + KA +    + L   +    Q  L SLP   A  L A
Sbjct: 1021 APELLRICSLILADNKIPPDTKAALLLLLTFLAKQHTDSFQAALGSLPVDKAQELQA 1076

[Close]

BLAST of HG10011095 vs. ExPASy Swiss-Prot
Match: O60100 (Probable importin subunit beta-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=kap123 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 45/135 (33.33%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 3    LVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRDNA 62
            L +  L  SE   R NAA+ +G  C+   E     Y +I + L P F +     A+ DNA
Sbjct: 898  LFMAALEDSEGEVRSNAAYSMGLLCQFSTEDLSSEYLNILQKLQPFFTQEVFRTAL-DNA 957

Query: 63   AGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSLVP 122
             G ++R+I+ +  A+P++QVL +    LPLKED+ E+  +Y  +  L    NP ++  + 
Sbjct: 958  IGCISRLILHNQNAIPVDQVLPIVFSKLPLKEDYLENAPLYHMILALYRQQNPCLVQHLG 1017

Query: 123  ELVNIFAHVVASPIE 138
            EL+ +FA V+    E
Sbjct: 1018 ELIPVFASVLTGSPE 1031

[Close]

BLAST of HG10011095 vs. ExPASy Swiss-Prot
Match: Q8VI75 (Importin-4 OS=Mus musculus OX=10090 GN=Ipo4 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 52/176 (29.55%), Postives = 82/176 (46.59%), Query Frame = 0


Query: 2    PLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRDN 61
            P++L     ++   R NA F +G   ++GG     ++  +   L PL      D  VRDN
Sbjct: 903  PVLLNNAREADPEVRSNAIFGLGVLAEHGGCPAQDHFPKLLGLLLPLLARERHDR-VRDN 962

Query: 62   AAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSLV 121
              GA+AR++M  P      QVL   L+ALPLKED EE +++    S L  ++  Q++ + 
Sbjct: 963  ICGALARVLMASPVGKTEPQVLATLLRALPLKEDMEEWLTIGHLFSFLHQNNPEQVVDVA 1022

Query: 122  PELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAA 178
             EL+ I + ++       + KA +    + L   +       L SLP   A  L A
Sbjct: 1023 SELLRICSLILPDNRIPPDTKAALLLLLTFLAKQHTDSFHTALGSLPNDKAQELQA 1077

[Close]

BLAST of HG10011095 vs. ExPASy Swiss-Prot
Match: P40069 (Importin subunit beta-4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KAP123 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-08
Identity = 41/143 (28.67%), Postives = 62/143 (43.36%), Query Frame = 0


Query: 3    LVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFG-------ESESD 62
            LV++         R NAA+ VG  C+         Y  + + LY L          +E D
Sbjct: 908  LVIRLTSDKSLEVRGNAAYGVGLLCEYASMDISAVYEPVLKALYELLSAADQKALAAEDD 967

Query: 63   NAVRD-------NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVST 122
             A R+       NA+G VARM + +   VPL Q +   L  LPL    EE   ++  +  
Sbjct: 968  EATREIIDRAYANASGCVARMALKNSALVPLEQTVPALLAHLPLNTGFEEYNPIFELIMK 1027

Query: 123  LVLSSNPQILSLVPELVNIFAHV 132
            L   ++P I +  P ++ IF+ V
Sbjct: 1028 LYQENSPVITNETPRIIEIFSAV 1050

[Close]

BLAST of HG10011095 vs. ExPASy Swiss-Prot
Match: Q8BKC5 (Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3)

HSP 1 Score: 45.4 bits (106), Expect = 7.8e-04
Identity = 30/122 (24.59%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 16   RRNAAFCVGEFCKNGGESTLKYYND----IFRGLYPLFGESESDNAVRDNAAGAVARMIM 75
            R+ AA+ +G   + GG++   +  D    + R +     +++ +    +N   AV +++ 
Sbjct: 922  RQAAAYGLGVMAQFGGDNYRPFCTDALPLLVRVIQAPEAKTKENVNATENCISAVGKIMK 981

Query: 76   VHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQIL----SLVPELVNI 130
              P+ V + +VL  +L  LPL ED EE++  +  +  L+ S++P +L    + +P++ +I
Sbjct: 982  FKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFSYLCDLIESNHPIVLGPNNTNLPKIFSI 1041

[Close]

BLAST of HG10011095 vs. ExPASy TrEMBL
Match: A0A5D3BN77 (Importin-4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00440 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 826  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 885

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 886  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 945

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 946  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1005

Query: 181  KC 183
            KC
Sbjct: 1006 KC 1007

[Close]

BLAST of HG10011095 vs. ExPASy TrEMBL
Match: A0A5A7TAG2 (Importin-4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001130 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 864  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 923

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 924  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 983

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 984  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1043

Query: 181  KC 183
            KC
Sbjct: 1044 KC 1045

[Close]

BLAST of HG10011095 vs. ExPASy TrEMBL
Match: A0A1S3C1Y9 (importin-4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496116 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 865  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 924

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 925  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 984

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 985  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 1044

Query: 181  KC 183
            KC
Sbjct: 1045 KC 1046

[Close]

BLAST of HG10011095 vs. ExPASy TrEMBL
Match: A0A0A0L6K4 (Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G219200 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.8e-94
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SS+ATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 865  MPLVLKELASSKATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 924

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 925  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 984

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLS+LPPAHANALAAYAP
Sbjct: 985  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSNLPPAHANALAAYAP 1044

Query: 181  KC 183
            KC
Sbjct: 1045 KC 1046

[Close]

BLAST of HG10011095 vs. ExPASy TrEMBL
Match: A0A6J1FWE4 (importin-4-like OS=Cucurbita moschata OX=3662 GN=LOC111447506 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL SSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD
Sbjct: 867  MPLVLKELASSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 926

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL
Sbjct: 927  NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 986

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYAP 180
            VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLS+YGQQMQPLLSSLPPAHANALAAYAP
Sbjct: 987  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSIYGQQMQPLLSSLPPAHANALAAYAP 1046

Query: 181  K 182
            K
Sbjct: 1047 K 1047

[Close]

BLAST of HG10011095 vs. TAIR 10
Match: AT4G27640.1 (ARM repeat superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-69
Identity = 129/179 (72.07%), Postives = 149/179 (83.24%), Query Frame = 0


Query: 1    MPLVLKELVSSEATNRRNAAFCVGEFCKNGGESTLKYYNDIFRGLYPLFGESESDNAVRD 60
            MPLVLKEL S EATNRRNAAFCVGE CKNGGE+ LKY+ D+ RG+ PLFG+SE D AVRD
Sbjct: 867  MPLVLKELGSPEATNRRNAAFCVGELCKNGGETALKYFGDVLRGISPLFGDSEPDLAVRD 926

Query: 61   NAAGAVARMIMVHPEAVPLNQVLQVFLKALPLKEDHEESMSVYGCVSTLVLSSNPQILSL 120
            NAAGA ARMI+VHP+ VPLNQVL VFL+ LPLKED EESM+VY C+ +LV SSNPQI S 
Sbjct: 927  NAAGATARMIVVHPQLVPLNQVLPVFLRGLPLKEDQEESMAVYTCIYSLVSSSNPQIFSH 986

Query: 121  VPELVNIFAHVVASPIETSEVKAQVGRAFSHLLSLYGQQMQPLLSSLPPAHANALAAYA 180
            VPELV IF  V+ SP+E  EVKA VGR FSHL+S+YG Q+QP++SSLPP+ AN LAA+A
Sbjct: 987  VPELVKIFGQVLESPVEKVEVKAIVGRTFSHLISVYGNQLQPIISSLPPSQANVLAAFA 1045

The following BLAST results are available for this feature:

BLAST of HG10011095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897499.1	2.7e-94	98.90	importin-4 [Benincasa hispida]	[more]
TYJ99765.1	3.5e-94	98.90	importin-4 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0039026.1	3.5e-94	98.90	importin-4 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008456074.1	3.5e-94	98.90	PREDICTED: importin-4 isoform X1 [Cucumis melo]	[more]
XP_004146264.1	7.8e-94	98.35	importin-4 [Cucumis sativus] >KGN57585.1 hypothetical protein Csa_009977 [Cucumi...	[more]

BLAST of HG10011095 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8TEX9	1.0e-16	32.77	Importin-4 OS=Homo sapiens OX=9606 GN=IPO4 PE=1 SV=2	[more]
O60100	1.4e-13	33.33	Probable importin subunit beta-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q8VI75	1.0e-11	29.55	Importin-4 OS=Mus musculus OX=10090 GN=Ipo4 PE=1 SV=1	[more]
P40069	3.1e-08	28.67	Importin subunit beta-4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
Q8BKC5	7.8e-04	24.59	Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3	[more]

BLAST of HG10011095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BN77	1.7e-94	98.90	Importin-4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A5A7TAG2	1.7e-94	98.90	Importin-4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A1S3C1Y9	1.7e-94	98.90	importin-4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496116 PE=4 SV=1	[more]
A0A0A0L6K4	3.8e-94	98.35	Importin N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_...	[more]
A0A6J1FWE4	1.1e-93	98.90	importin-4-like OS=Cucurbita moschata OX=3662 GN=LOC111447506 PE=4 SV=1	[more]

BLAST of HG10011095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27640.1	1.1e-69	72.07	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..179 e-value: 4.2E-27 score: 96.7
None	No IPR available	PANTHER	PTHR10527:SF71	BNAANNG11870D PROTEIN	coord: 3..179
IPR040122	Importin beta family	PANTHER	PTHR10527	IMPORTIN BETA	coord: 3..179
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10011095.1	HG10011095.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0061608	nuclear import signal receptor activity
molecular_function	GO:0008139	nuclear localization sequence binding
molecular_function	GO:0031267	small GTPase binding