HG10010987 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010987
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlycine cleavage system H protein
LocationChr01: 1296954 .. 1303192 (+)
RNA-Seq ExpressionHG10010987
SyntenyHG10010987
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTGGTCGCCAAAGTTGATTGTTGGTGGTGGTCGTCGGTTGAGGTTGAAGGTGATGGTTGCTCAAGGTTTCATCAAAGTAAGTTGCCAGAGGTGGCTGGCGAAAGGCAATGGTAGCCACGACAACATGGTGGAAGTGAGGTAGAGAACTAGTGAGGACATTTTGGTAATTTTAAAAATTATACAAATTGGGGAGAGATTAACCATTAATAACTCAAAAGTCATTTTTCTAAAAGTTGATTTCAAGTGTTTCTCTTAAACCAACTTATTTTATAAACTCATTTTATCAAAAGCTATTTTGAGTGCGTGGTTGCAAAACACTTCAACTTTTTTCCAAAATAACTTTTTTTTTTCTCAAAATTTAACACTTGATAGTACTCGAAAAGTGCTATTCTAGGGTTTCTATTTACGCTAGTTTACCATGGAAATGGAGAGCTTTAGAGGTAATTAAGGAACATGGAAATGGGAGCCTGAGGACTATAAATCGAGTACTATCAAGAGAAGCTCAATGCTTCCAAGGCGCAATTTCAATGCGAGAAACAAGTGTGGTAGCATTATGACACCTCAAACAACAATGCACGATGCTTAAACCTAAGAGCAAGCATTGCAACTCTGTGGGAGAGCGTCGTAATGCTTCGAAAACAAAAGTACGCTTCAAAACAGGGTAGCATCGCGAGACTTACAACGTCATAATGTCTCAATAGTTTCATCTATTTATTCAGTTCGATGGTGTAAGGAAAGATGATTGAATTTCTTACCTAATAATGGTAAAGGAATTGTGAGAACACAAAGTTAATTATTTTGAAAAACAATAAATAAATAAACAATGCTATGTTTAAAAACGATTTGTTTGTTTGTTTTGTTTTGTGTTTTAATTAGACTTAATAAACAATACATACACCCACACTCATTCTTCTTCTTCTTTTTTATGAGTATTTTTTTAAACAAAAATTGAAGGCAACTTTTGAAAACTCAAAAAATAGTTTTTAAAAGTTTATCTTTTTCATTTTGGAATTTAGTTAAGTATCAAAAACTATGGTAAAGAAATCGTAAGAAAATAAAGGTAAAATTTTAAGAAAAAATGGTTATTAACTAAGACCTAAATAATTATCCAGATGAGTCTTAGAAATATATTAAACACTTTTTAAAGCTTTAAAGTTTAAAAATCTATTTAAACTAGTCTAAATTTGTAGTAGTCTAACCAAAACTTTAAAAGAAAAAAAAACTTAAAAATCAACAAACTCATACAAAAAAGAATACTTACATTAAAAAGTAAATATTTATATTTTTAAATGAATCCAAATTCTTGTGCTTAATATTGTGTATGTGTTTTTTCCGGAGAAAATATTCTTTATATTAATTCTATTTTGTTGATTTTCTTTAGGCCAAATCATAAAAAAAAAAAAAAATGTCCTTGAATTTTATATTTTGGGTAAAAAATACGTTTGAACTTTCAAAAGTTTTAAAAAATACCCTTAACCTGTCAAAAAGAGTTAAAAATACCTCAGCATTAATTTTGGATTAAAACTGTTAAAAAATACCCCTAAACTTTCAAAAGTTTCAAAAAAAATTCCCTTAAACTTTAAAAAAGTTCAAAAATACCTTCACTGTTAGTATATGAACAAAAACCATTGGCCTTGTTCGACGAGATTTTTGAAGAAATTTGATTCGTGGAATTTGAATTTTTTATTTGTATTAATTTCAGTATAGTATAGTGAGTACAATCTCTAATACACAATCTTTTGATGCTTTCTCTCAAAAAAATAAACTTTGCTATTTGGGCTTGTTGATCTTATTGAATGATCTGCCTTTGGGCTTGATGATCTTCTTGAAGGAAGAGCCTTTGAGCTTGATGATCTTCTTGGAGGATCAACCTTTGGGCTTGATGATCTTCTTGGAGGATCGACTTTTAGGCTTGATGATCTTCTTGAGGATCGACTTTCTGGTGTGTTCATCAGCTTGGATCGACCTATGGCTTGTTTATCAGCTTAGACGACATCTGGCTTGTTAATAAGCTTGGATCAGCCTCTAGCTTGTTGATCAACTTGGATATGTTTATGACTTTAAGAGCTTTAGAGAGTTTTCTAATCTTCTGGAAATCCTCTAAGCCTTAGTCTTTAGATCTTCAAGAGAGTATAAGTTGATCTTGGGAGCTTTAGAGCTTCAACATTCAATTATTCCTATCTTCAAAAAGTTGAGCTTCAGTCTTCTATCTTGAGGTCGACCAGAGCTTCAGAGTCTTGAAATCTTCAGAGCTTCCATCTTCAAGTCTTCAACACTTTGTTGCCAAATGCTTCCAACCTGTCCAAATGAAAGACTAAGACCGATATTTATATTTATAGAGGTTTCCCATGGGCTTTAGGTGGGCTTGGGTCCATTTTCTTTTGGGCTTGGGCTTGAGCTTGGGCTTGAGTCCAATATCTTTTCTTTGGCCCAAACTTCCACCATGGGCTTGAATTGTGTTGGATTTTTGGACCCGCGCAACTTTAATTACTCGGCCTGATCCACTTTATAATTCTCACGATGGACTTGGGCTTTCATTGCGATGACGTGGCGAAATTTGGTTGGCCGAAATTTCTCCTTCAACTAGCACCTCGTTGTAAAAAGAACTCTAAAATTAAGAAGGAAAAAAAGAAGAAAAAGGTTTAAAAATGCTCTTGCCATTATTATGGTGATCACATTGTGTGAGGTTTTCTTGAGTTCGAAAAGAACCAATTTTAAAATAAATTATATAGATATCCTCATTTTTTTATATAGATATTCTCATTTTTCTTCTATTTTTCCAATTCTTACACAAATTATCTCGACAACTAAAATAAAAACCAAAATTTTAAGTTATAACATAAAATCCCACAAAATCTCACATAATTCCAAAATTAATCCCTTTAAAACATACCAAAACGATAAATAGTCAAATAAAATAAAATATATTTGGCTATTAACACACACAATTACTACAACTTTGTTAAAACAATTCAATCCTAAAATTCCTTGGTGATTTCATTATTCACTTTCTTCTTATTATAGACAAAAAGCATATAATTTTTTTTTAAAATAAATAAATGTCAAAGTCAAACAATTAACAAAAAAGAGAGTAGGAGGGTATTGAAGAAGAGAGGGCAAAAAAGAACGAAAATAGATAAGTAAGATGGTATTAACAGTTTCTGTTCACATAACACTAAAGATATTTTTTATATTTTTTAAAAAGTTTTAACGGTATTTTTGACTAAGTTTGAAATACTATTTTAGACACAAGAGGTCTCCTTTTTTTAATTATTATTCTAATTTAAAATAAGGCTAAATTATAGTAAATACCCTTAAACTTTGTCATTTGTTTAAAAAATATCCTTGTGCTTTCCAAAGTTACAATATTACCCCTCAACTTTCATAAAAGTTTCAAAAGTACCCTTGGAATAGAAATTTTTTGAAGTTTTAACAGAAATCGAGACTTAGAACTATGTGACAATAATCTAAAATGATGTGATAATCTAAATTTTTGTTCTACGTAATTGTCATGCCATTTCGTATCTAATTTTTCGTCTAAATTTCTAACGATTTTCTACTCTAAAGGTATTTTTGAAACGTTTATGAAAGTTCAATGGTAATATTGTAACTTTTGAAAGTCTAAGAGTATCTTCTAAATAAATGGCAAAGGTAAGGGCATTTTTTATAATTTAACTTTAAAATATTTATAAAAAAAAAAAGTACTTTAGAGACTTTAAATCCATTCTTAAAATTCTAGAGACTATACGTGAATATTGTTTACAACTCGGGGCTAAATCGGTAATTTTCCAATTAAAAAGGTAAAATACCGTAAAATGTTAATACAGTAAGCGATACTACAATTACCGGCGGGTCATTATCAGCCCATAACTCTTCAGATGATGATGATGATATTGAAGAAAAAAGAGGCAAAATCACTCGAAGAAAGAAAAAAGATGAAGAAAAAGAAAAAAGAAAAAAAAAAAAAGCAATTTTTAGATTAGGCAGTCACTGCCCACCATCCGTCGAAGATAAAGCAATGTCGTAAAACAAAAGTTTTATAACTTTCTTTGGTGGTAGCAAAACAGAGGACGAAGAAGAAGAAACCAGAGCAAATTAAACCAAAGAAAAAAACTATGGCTCTTAGAATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTCTCATCATCTAAAACCCATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCTACCGGTAGTTTTTTGCTCTTTACTACTTTGCATGCAAACTGTTTGTGTAAATGCCTCTATGAAGTTTGAGTTCGTTTTTTACACTCTTGGTTCTTGTTTCTGTTCTGTTGTGTTGTTTAATTCTCAATTATGGTTATTCTTTTCTGGGTAAGATAAAAGGGGGTTATTTTACTTTATATTTCTATAAAGCTTATTGGTTGGATTTGCAGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCAACCGTTGGCATCACTGACCATGCTCAGGTGCCCTCTCTTTCTTCCATCTTTAAACGCCAATTTAACAACCCATGAAAATGATCATTTTCCAAATAATGTAACTCTTGTTTGCCTGAATTTTAGGTGAAATTGTAAGTTTGAGCCATGAACTTTTAGAATTGTGTCTATTTAATAGCGTTCTTTGAAAAGTTCATAATAAAATCTTTAAGTTCTTTAGAAAGTTCTTAATAAATCTTTAAGCCTCTATGCGTTTTCAATTTTGTGTCTTATAGGCTTATAGTGTTAACTTCGCTACTTTAATGGTGACATGATAGGTTGACTATAAGGGTTGCATTGGAAATCAACCTGTGTCGTGTTAGTGTCAAACGAATTAATCGTTGGGTCATATTAGACTAAAATTGAAAGTTTTGAGACTCATAAAAAAAAAACTTTTTATACTATAGGACTAGTCAGGCCCAAGGGGACTTAGCTTATAATTTTACCTAAATTTTACTTGGAATGATATTTGGATAAGGAAACTTGGTAGTTACACAATTCCTTTTGCTGTTACTCCCTCTTACCATGGAAACTGATTCAAGCTTTTGTTATAACAACTTTTACATCACTTCATTTTAGAAACTTTGCATTTATACTTGGTATTCAAATTTGGGTTGGAAGCATTTTGTTTTCATGCATCTTCACAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATTAACTCCCCAATCTCTGGTGAGATTGTTGAAATTAACCCACAGCTTAAGGAAACTCCTGGTTTGGTAATTCCAAATCCTCATATTCTTTTTTCCAATTCCTTGGACTCAGCATTTGTTTGATAAACTACTGTTGTTGGTTAAAACACGGTTCCGATTCCCATATTCTGCTAACTTTAATGTTTTCATTTGTGGGCATTCTGTCTGTTTCATTTTAGTTCATATGCTTTTTCCTAACGTACTTAATCTAGCCTTTGTACTTAGTTACTATGTAATTAGATATTTAACATATGCATTAGGTTCTCGCGTCCACAAAACTAGAGAGACTAAAATGAAACAAAGGAGAGCGTAGAAATTACATGTTACAAAAAAAGATGTGGTAAATTTAGTCTAAATATAGTATTGTTGGAATCTCTTGAATCCGTTACTTGGCGTTCCGAATAACCGTGCATGGGTTTTCGTTGCCCGATTAGCGAGGTGGGGTCTAGAGGTGATGCGCTCTGGTGGGGGCTCGAGGGCAACGCCCCTAAAACCTAATTTATATTTGTACATGATATATTTAAACTTTTGGGTCTAGGGTTTAGAGATGTGCTAAGACATAAACCCTCTGACCTTACTAGTGTCTCTATTATTTGTATTATCTGATATTTCTCTCTAATTATAAACTACTTTCTTCCTCTACCCGTAGATGTAGCTAACACACTGTTAGTGAACAACGTAAATGTGTGTGTCGATTTCTTCTTGTTCTTTATTCTTTGCTCATCGATGTTGTTTCTGTGCTAACATGTATATTATTGATTTGTTTGCTTTCATGTTCATGAAATGAAGATCAACTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTAGATTCCTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

mRNA sequence

ATGATGGTGGTCGCCAAAGTTGATTGTTGGTGGTGGTCGTCGGTTGAGGTTGAAGGTGATGGTTGCTCAAGGTTTCATCAAATTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCAACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATTAACTCCCCAATCTCTGGTGAGATTGTTGAAATTAACCCACAGCTTAAGGAAACTCCTGGTTTGATCAACTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTAGATTCCTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

Coding sequence (CDS)

ATGATGGTGGTCGCCAAAGTTGATTGTTGGTGGTGGTCGTCGGTTGAGGTTGAAGGTGATGGTTGCTCAAGGTTTCATCAAATTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCAACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATTAACTCCCCAATCTCTGGTGAGATTGTTGAAATTAACCCACAGCTTAAGGAAACTCCTGGTTTGATCAACTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTAGATTCCTTGCTTGGTCCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

Protein sequence

MMVVAKVDCWWWSSVEVEGDGCSRFHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH
Homology
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BLAST of HG10010987 vs. NCBI nr
Match: XP_038876916.1 (glycine cleavage system H protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLKE+PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKESPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. NCBI nr
Match: XP_008465945.1 (PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-66
Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLKETPGLINSSPYEGGWMIKVKPSNP ELDSLLGPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKETPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. NCBI nr
Match: XP_004148493.1 (glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1 hypothetical protein Csa_002081 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLKE+PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKESPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. NCBI nr
Match: KAG6571837.1 (Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV
Sbjct: 30  FSTVLDGLKYASSHEWVKHEGEVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 89

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLK++PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 90  ESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 149

Query: 145 YTKFCEEEDAAH 157
           YTK CEEEDAAH
Sbjct: 150 YTKHCEEEDAAH 161

[Close]
BLAST of HG10010987 vs. NCBI nr
Match: XP_022952526.1 (glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_022972003.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita maxima] >XP_023553680.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGEVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLK++PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTK CEEEDAAH
Sbjct: 154 YTKHCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.4e-62
Identity = 112/132 (84.85%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVDLPE+GGSV++   FGAV
Sbjct: 31  FSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAV 90

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSD+NSPISGEIVE+N +L ETPGLINSSPYE GWMIKVKPSNP+ELDSL+G KE
Sbjct: 91  ESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKE 150

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 151 YTKFCEEEDAAH 162

[Close]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.4e-62
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFVDLPE+GGSV++   FGAV
Sbjct: 31  FSSVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAV 90

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSD+NSPISGEIVE+N +L ETPGLINSSPYE GWMIKVKPSNP+ELDSL+G KE
Sbjct: 91  ESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLMGAKE 150

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEED+AH
Sbjct: 151 YTKFCEEEDSAH 162

[Close]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match: P46485 (Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia OX=4227 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-59
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 0 

Query: 22  CSRFHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSF 81
           C     +LDGLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE GGSV++   F
Sbjct: 30  CFSSAAVLDGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEVGGSVTKATGF 89

Query: 82  GAVESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLG 141
           GAVESVKATSD+NSPISGEIVE+N +L +TPGLIN SPYE GWMIKVKPSNP+ELDSL+G
Sbjct: 90  GAVESVKATSDVNSPISGEIVEVNSKLTKTPGLINKSPYEDGWMIKVKPSNPSELDSLMG 149

Query: 142 PKEYTKFCEEEDAA 156
           PKEYTKFCEEE AA
Sbjct: 150 PKEYTKFCEEEGAA 163

[Close]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.6e-59
Identity = 106/132 (80.30%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +L+GLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAV
Sbjct: 35  FSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAV 94

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATS+I SPISGE++E+N +L E+PGLINSSPYE GWMIKVKPS+PAEL++L+GPKE
Sbjct: 95  ESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKE 154

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 155 YTKFCEEEDAAH 166

[Close]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.7e-58
Identity = 107/132 (81.06%), Postives = 121/132 (91.67%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +L+GLKYA+SHEWVKHEGSVAT+GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAV
Sbjct: 34  FSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATS+I SPISGEI+E+N +L E+PGLINSSPYE GWMIKVKPS+PAEL+SL+GPKE
Sbjct: 94  ESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match: A0A1S3CQ17 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66
Identity = 126/132 (95.45%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLKETPGLINSSPYEGGWMIKVKPSNP ELDSLLGPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKETPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match: A0A0A0LI67 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.4e-66
Identity = 125/132 (94.70%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESG SVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLKE+PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKESPGLINSSPYEGGWMIKVKPSNPGELDSLLGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match: A0A6J1I8M1 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.4e-65
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGEVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLK++PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTK CEEEDAAH
Sbjct: 154 YTKHCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match: A0A6J1GKG7 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.4e-65
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEG VATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGEVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLK++PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTK CEEEDAAH
Sbjct: 154 YTKHCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match: A0A6J1JYK8 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 121/132 (91.67%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +LDGLKYASSHEWVKHEG VAT+GITDHAQDHLGEVVFVDLPESG  VSQGKSFGAV
Sbjct: 34  FSTVLDGLKYASSHEWVKHEGPVATIGITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATSDINSPISGEIVE+NPQLK++PGLINSSPYEGGWMIKVKPSNPAELDSL GPKE
Sbjct: 94  ESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 228.4 bits (581), Expect = 3.9e-60
Identity = 106/132 (80.30%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +L+GLKYA+SHEWVKHEGSVAT+GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAV
Sbjct: 35  FSSVLEGLKYANSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAV 94

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATS+I SPISGE++E+N +L E+PGLINSSPYE GWMIKVKPS+PAEL++L+GPKE
Sbjct: 95  ESVKATSEILSPISGEVIEVNTKLTESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKE 154

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 155 YTKFCEEEDAAH 166

[Close]
BLAST of HG10010987 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 225.3 bits (573), Expect = 3.3e-59
Identity = 107/132 (81.06%), Postives = 121/132 (91.67%), Query Frame = 0 

Query: 25  FHQILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAV 84
           F  +L+GLKYA+SHEWVKHEGSVAT+GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAV
Sbjct: 34  FSTVLEGLKYANSHEWVKHEGSVATIGITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAV 93

Query: 85  ESVKATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKE 144
           ESVKATS+I SPISGEI+E+N +L E+PGLINSSPYE GWMIKVKPS+PAEL+SL+GPKE
Sbjct: 94  ESVKATSEILSPISGEIIEVNKKLTESPGLINSSPYEDGWMIKVKPSSPAELESLMGPKE 153

Query: 145 YTKFCEEEDAAH 157
           YTKFCEEEDAAH
Sbjct: 154 YTKFCEEEDAAH 165

[Close]
BLAST of HG10010987 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-48
Identity = 88/129 (68.22%), Postives = 109/129 (84.50%), Query Frame = 0 

Query: 28  ILDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESV 87
           +L  LKYA SHEWVK +G+ AT GITDHAQDHLG+VV+V+LP+ G SVSQGKSFGAVESV
Sbjct: 28  VLKDLKYADSHEWVKIDGNKATFGITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESV 87

Query: 88  KATSDINSPISGEIVEINPQLKETPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTK 147
           KATSDINSP+SG++VE+N +L E+PGL+NSSPYE GW+IKV+ S+  E + L+   +Y+K
Sbjct: 88  KATSDINSPVSGKVVEVNEELTESPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSK 147

Query: 148 FCEEEDAAH 157
           FCEEEDA H
Sbjct: 148 FCEEEDAKH 156

The following BLAST results are available for this feature:
BLAST of HG10010987 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876916.12.6e-6695.45glycine cleavage system H protein, mitochondrial [Benincasa hispida][more]
XP_008465945.14.5e-6695.45PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo][more]
XP_004148493.11.3e-6594.70glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1... [more]
KAG6571837.11.1e-6493.18Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperm... [more]
XP_022952526.11.1e-6493.18glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_0... [more]
BLAST of HG10010987 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q397322.4e-6284.85Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN... [more]
P493595.4e-6284.09Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN... [more]
P464852.5e-5980.60Glycine cleavage system H protein, mitochondrial OS=Flaveria trinervia OX=4227 G... [more]
Q9LQL05.6e-5980.30Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P258554.7e-5881.06Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
BLAST of HG10010987 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CQ172.2e-6695.45Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 S... [more]
A0A0A0LI676.4e-6694.70Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=... [more]
A0A6J1I8M15.4e-6593.18Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE... [more]
A0A6J1GKG75.4e-6593.18Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 ... [more]
A0A6J1JYK82.7e-6491.67Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE... [more]
BLAST of HG10010987 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G32470.13.9e-6080.30Single hybrid motif superfamily protein [more]
AT2G35370.13.3e-5981.06glycine decarboxylase complex H [more]
AT2G35120.12.0e-4868.22Single hybrid motif superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 32..151
e-value: 1.1E-48
score: 164.1
IPR033753Glycine cleavage system H-protein/SimiateCDDcd06848GCS_Hcoord: 34..128
e-value: 2.443E-48
score: 149.606
NoneNo IPR availableGENE3D2.40.50.100coord: 19..152
e-value: 1.0E-53
score: 182.5
NoneNo IPR availablePANTHERPTHR11715:SF32GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 21..156
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMTIGR00527TIGR00527coord: 30..153
e-value: 4.1E-46
score: 154.2
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 21..156
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 29..150
score: 35.88562
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 72..101
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 47..129
score: 27.454716
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 28..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010987.1HG10010987.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019464 glycine decarboxylation via glycine cleavage system
biological_process GO:0009249 protein lipoylation
cellular_component GO:0005960 glycine cleavage complex
cellular_component GO:0005739 mitochondrion