HG10010853 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010853
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	LOB domain-containing protein
Location	Chr06: 26501422 .. 26504058 (+)
RNA-Seq Expression	HG10010853
Synteny	HG10010853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGGTAAATTAAAATTTAATTGATTGAGTTATGTTCCGGTTGACTATATTTGTTCTCCCTACTTTTCTTTTCTAATTTTGCATAATTGTTACTAATTTTTCTAATTTGGAATTTTACTTGTTTCAAACAAAGGCTAGTTTTTTGAGCTATTTCAGAAATGGGAAGTTGAGTTTTAAAAAAATAGGGTGTTTGTTTCAGATTTGAAAACCCAAATAAGGAAACTTAAAATGGGATTTAGAGATGTAGGGCTGTTATGCCCTTAAATACTAGGCTACTGCCCTTAAATGGGTAAAGAAAAGCTAGTAATTTTAATTAGGATGGCAGTTTATTTATTTTTCCCTAGCGAGTTTACTGAAATCTAGAGCTATCAGTCCTTTGTTTGATTATTATCAAATCATTTCTTCGGCGGTTACTGCGGTAATATTCCCTAATCAAAATTACCTGTTTTTTTTTTTGGGAGTGTTTTGGGGTTTTTTTGTTTTATTATTATTATTATTATTGCAGTTATTCAGGAATTGGTCGGTCTATTGCCTTAAAGTTAAGCTTTTGATTAGAGAGACAAGAGTCATTTCCTACGTTTCCCCAATTTTTAGCTTCCTGTCAGTGTATCTTCTAAAAAACAATCTCAATGTCAATTGTATTCTTTACTTCAAATAATAATTTCTACACTTTTTTTCCCTTCTAAAACCATTAGTAATCGCTGTATTTTGTTTCTTATAAGGTTTTATTATGTTTTAAAAAAAAAAAAAAAAAAAAAAAAATTGGAATGGTTTCTTGAAAAAGTGTTTAGGTGATGATTTAGTTTCTATATGTTTAGAAATGTAATTATGCATGTCAGTTTTGGTAATTTGGAACTTTTTTTTTACCCACAATTTTTAATTTTCTGTTCTCTACATTTATGAATAGTTTTTAAATTTTAAACTAAAAACCTATTTTTTAAGATTTTTGTTTTTGTTGTTTTTATATTTGGATAAGATTTCAAAAGTATCAGTTACAAAAATAGGAAAAACAAATAAATTAGTATAATTTTGAAGAATATAAAACTAAAAATGAAGGTTCTATTAATTAAGGTATTTCATTATTGCTCATTTAAACAAGAGTTTTAACATTATGGTCTTGATTGTTACATTTATTTTTAAGTCTTTAATTGTTTAAAAATTAAGAAATGGAGTTGTCATAGAAAGGGGTATATATTTTAATTTTTTAATCTTGGTTATGTCTATAATATAAAGAGCTCTCTAATCCAAATACGACACAGTTCCAATAGTATTTTCTAAAAAATATTTATTTTTTTCCTATTTTTAGAAAAATATTTGATGTATACTTGGGAGTATATAGTACTTTTACTTTTCTTTACTGCATATTAGCTATACCTACTATATAAATGTCTGTGTACTATTAACAGTATGGTTGGTAAATATTTGTTTTAGAAAATATATAGTACAAAAATGAATTTTTATACTTTCTAATTTTCACTTTTAAAAATTAATTTACCTAGTATCGTACAAAAATTATTATTATTATTATTATTATTATTTTTGCATTGAAATATGTTTTAAGTTTTAACAATGTTTTTGTCAAAAGAAAATTTAACGTACGCTTTTTGTCGTTGAAAAATGCACGAATCCTTGTAGTACTAATACTATCTAATTTCTATATTTTCCATTATTATTGTATATTTTGTTATTTAAATACCTATCTTAAAACAAAAATTTTGAGAGTACAAAAATCAAAATGGAACGAAAATATATCATTATTTTTTTTTTCTAATGTAAGGTGAAAAGTTAAAAAAAAATTCCATTTTTTTCTTTTGTGAAGGCATTTTAAAGTGGGTAAAAAAAATAGAAATTAAATTGGAAGATTATTATTATTATTATTAGAAGGTTAATATATGTAAATAAAAAACTTTGGCAGGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGA

mRNA sequence

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGA

Coding sequence (CDS)

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCAGGAACTGCCAGTGCCGGCGGTGGTGTAGGTGGCGGCGGAGGAGGGCCATGTGGGGCTTGCAAGTTTTTGAGAAGAAAGTGTGTCCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCTCATTTCGCAGCGGTACACAAGGTGTTCGGAGCCAGCAACGTCTCGAAGCTTCTCCTTCATATTCCGGTCCATAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAAGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTTGCTCACATCTTCGCTCTTCAACAACAGGTGGTGAGTTTACAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACGCTGGAGCTTCCGTCGCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGGGCAACAAACGCCGCTTTCCATCTCGGACCTGCCGTCGGCCTCCTCCCTGCCGGCAACTTACGACTTGTCGTCCCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGCGGCGGTTCATCAACGGCGGCAGGAGAGGGTGATCTTCAAGCCCTGGCCCGCGAACTCCTCCATAGACACGGCGCTCCGCCGTGCTCCGGCGCCTCGTCGCCGCAATCGCTCTCTAAGTGA

Protein sequence

MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLSK

Homology

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BLAST of HG10010853 vs. NCBI nr
Match: XP_004145058.1 (LOB domain-containing protein 18 [Cucumis sativus] >KGN46236.1 hypothetical protein Csa_005401 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 231/241 (95.85%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTAS GG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AELTYLQAHLATLELPSPPNPPPPPPPPSFP  Q PLSISDLPSASSLPATYDLSSLFDP
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPA-QPPLSISDLPSASSLPATYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLS 240
           MAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPPCS ASSPQSLS
Sbjct: 181 MAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

Query: 241 K 242
           K
Sbjct: 241 K 240

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BLAST of HG10010853 vs. NCBI nr
Match: KAA0040004.1 (LOB domain-containing protein 18-like [Cucumis melo var. makuwa] >TYK24497.1 LOB domain-containing protein 18-like [Cucumis melo var. makuwa])

HSP 1 Score: 434.5 bits (1116), Expect = 6.0e-118
Identity = 231/241 (95.85%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTASAGG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASAGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AELTYLQAHLATLELPSPPNPPPPPPP SFP  Q PLSISDLPSASSLPATYDLSSLFDP
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPQSFPA-QPPLSISDLPSASSLPATYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLS 240
           MAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPPCS ASSPQSLS
Sbjct: 181 MAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

Query: 241 K 242
           K
Sbjct: 241 K 240

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BLAST of HG10010853 vs. NCBI nr
Match: XP_023548284.1 (LOB domain-containing protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.6 bits (1002), Expect = 1.0e-104
Identity = 211/242 (87.19%), Postives = 219/242 (90.50%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGG G+ +AGGG GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGG-GSGTAGGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQQQVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AEL+YLQAHLATLELPS      PPPPP+F   Q P+SISDLPSASSLP TYDLSSLFDP
Sbjct: 121 AELSYLQAHLATLELPS------PPPPPNF-AAQPPVSISDLPSASSLPVTYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQF-AGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSL 240
           MAQPAWAMQQQRLD RQF +GG GGSST AGEGDLQALAR LLHRHG PPCS ASSP SL
Sbjct: 181 MAQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARSLLHRHGGPPCSNASSPPSL 234

Query: 241 SK 242
           SK
Sbjct: 241 SK 234

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BLAST of HG10010853 vs. NCBI nr
Match: KAG7026047.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.4 bits (999), Expect = 2.2e-104
Identity = 214/253 (84.58%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-----GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GGGVG     GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDL 180
           QVVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  SLPATYDL
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPPSLPATYDL 180

Query: 181 SSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQALARELLHRHGAP 240
           SSLFDPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQALARELLHRHGAP
Sbjct: 181 SSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP 240

Query: 241 PCSGASSPQSLSK 242
           P S +SSP S+SK
Sbjct: 241 PSSDSSSPPSVSK 252

[Close]

BLAST of HG10010853 vs. NCBI nr
Match: KAG6593707.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.4 bits (999), Expect = 2.2e-104
Identity = 214/253 (84.58%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-----GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GGGVG     GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGVGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDL 180
           QVVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  SLPATYDL
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPPSLPATYDL 180

Query: 181 SSLFDPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQALARELLHRHGAP 240
           SSLFDPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQALARELLHRHGAP
Sbjct: 181 SSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP 240

Query: 241 PCSGASSPQSLSK 242
           P S +SSP S+SK
Sbjct: 241 PSSDSSSPPSVSK 252

[Close]

BLAST of HG10010853 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 2.5e-74
Identity = 162/232 (69.83%), Postives = 183/232 (78.88%), Query Frame = 0


Query: 9   GGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGA 68
           G GG G++  GG  GGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVFGA
Sbjct: 17  GCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGA 76

Query: 69  SNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQA 128
           SNVSKLLLHIPVH+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQVV+LQAE++YLQA
Sbjct: 77  SNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQA 136

Query: 129 HLATLELPSPPNPPPPPPPPS--FPGQQTPLSISDLP-SASSLPATYDLSSLFD-PMAQP 188
           HLA+LELP P   P P P P   F     PL+I+DLP S S LP+TYDL+S+FD   +  
Sbjct: 137 HLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTSSS 196

Query: 189 AWAMQQQR-LDPR-QFAGGGGGSSTAAGEG-----DLQALARELLHRHGAPP 230
           AWA QQ+R +DPR Q+      SS A G G     DLQALA ELLHR G+PP
Sbjct: 197 AWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQGSPP 248

[Close]

BLAST of HG10010853 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 5.5e-66
Identity = 150/233 (64.38%), Postives = 168/233 (72.10%), Query Frame = 0


Query: 8   SGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFG 67
           S  G P ++S      GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 68  ASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQ 127
           ASNVSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQVVSLQ EL+YLQ
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQ 121

Query: 128 AHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWA 187
           AHLATLEL   P P PP  P S  G    LSI+DLP+ S  P+ YDLSS+F+P+    WA
Sbjct: 122 AHLATLEL---PQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWA 181

Query: 188 MQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLH--RHGAPPCSGASSPQS 239
           MQQQ   P     G   SS   G G+LQALARE +H  +  A P  G S   S
Sbjct: 182 MQQQP-RPSDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

[Close]

BLAST of HG10010853 vs. ExPASy Swiss-Prot
Match: O81322 (LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42
Identity = 105/211 (49.76%), Postives = 134/211 (63.51%), Query Frame = 0


Query: 25  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRL 84
           G GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASN SKLL+ IP  +RL
Sbjct: 7   GCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRL 66

Query: 85  DAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLELPSPPNPPPP 144
           DAVVT+ YEA ARLRDPVYGCV HIFALQ QV++LQAEL Y+Q  L+TL+         P
Sbjct: 67  DAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQ-------GLP 126

Query: 145 PPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQ------- 204
           PP      +    S S++P  SS+ +  ++SS    +  P  + QQ++  P++       
Sbjct: 127 PPNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEVPTE 186

Query: 205 ---FAGGGGGSSTAAGEGDLQALARELLHRH 226
               +   G  +    +GDL ALARE   ++
Sbjct: 187 SVDLSTFFGLENPVDEDGDLNALAREFFTKY 208

[Close]

BLAST of HG10010853 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.3e-42
Identity = 106/211 (50.24%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 15  TASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 74
           T +  GG G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+
Sbjct: 3   TGNLNGG-GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKM 62

Query: 75  LLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLE 134
           LL +P+HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL ++QA L+T++
Sbjct: 63  LLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ 122

Query: 135 LPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLD 194
              P   P    PPS                            FDP     +AM+   LD
Sbjct: 123 -RFPLQSPQQMQPPS----------------------------FDPAHNNEYAMEPSNLD 181

Query: 195 PRQFAGGGGGSSTAAGEGDLQALARELLHRH 226
                G         G+GD Q LA + + R+
Sbjct: 183 --SVWGEEHLLQDGTGDGDFQELASQFVSRY 181

[Close]

BLAST of HG10010853 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 16  ASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL 75
           AS+G G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 76  LHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLA 132
           L++P+H R +AVVTI YEAQARL DPVYGCV+HIFALQQQV  LQ+++  ++A +A
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]

BLAST of HG10010853 vs. ExPASy TrEMBL
Match: A0A0A0KEN5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 231/241 (95.85%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTAS GG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASTGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AELTYLQAHLATLELPSPPNPPPPPPPPSFP  Q PLSISDLPSASSLPATYDLSSLFDP
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPA-QPPLSISDLPSASSLPATYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLS 240
           MAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPPCS ASSPQSLS
Sbjct: 181 MAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

Query: 241 K 242
           K
Sbjct: 241 K 240

[Close]

BLAST of HG10010853 vs. ExPASy TrEMBL
Match: A0A5D3DLI5 (LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00390 PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.9e-118
Identity = 231/241 (95.85%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGGPGTASAGG VG GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA
Sbjct: 1   MSANPSTSGGGGPGTASAGGSVGAGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AELTYLQAHLATLELPSPPNPPPPPPP SFP  Q PLSISDLPSASSLPATYDLSSLFDP
Sbjct: 121 AELTYLQAHLATLELPSPPNPPPPPPPQSFPA-QPPLSISDLPSASSLPATYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSLS 240
           MAQPAWAMQQQRLD RQFAGGGGGSSTA GEGDLQALARELL RHGAPPCS ASSPQSLS
Sbjct: 181 MAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHGAPPCSDASSPQSLS 240

Query: 241 K 242
           K
Sbjct: 241 K 240

[Close]

BLAST of HG10010853 vs. ExPASy TrEMBL
Match: A0A6J1KML3 (LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111494694 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.1e-104
Identity = 212/251 (84.46%), Postives = 220/251 (87.65%), Query Frame = 0


Query: 1   MSANPSTSGG--GGPGTASAGGGVG-GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 60
           MSANPSTSGG  GG G    GGG+G GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA
Sbjct: 1   MSANPSTSGGGSGGGGGGGVGGGLGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 60

Query: 61  HFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVV 120
           HFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVV
Sbjct: 61  HFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVV 120

Query: 121 SLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSL 180
           SLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  SLPATYDLSSL
Sbjct: 121 SLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPPSLPATYDLSSL 180

Query: 181 FDPMAQPAWAMQQQRLDPRQFAGGGGGS-------STAAGEGDLQALARELLHRHGAPPC 240
           FDPMAQPAW + QQRLDPRQF GGGGG        ST AGEGDLQALARELLHRHGAPP 
Sbjct: 181 FDPMAQPAWVLPQQRLDPRQFTGGGGGGGGGGSGLSTVAGEGDLQALARELLHRHGAPPS 240

Query: 241 SGASSPQSLSK 242
           S +SSP S+SK
Sbjct: 241 SDSSSPPSVSK 250

[Close]

BLAST of HG10010853 vs. ExPASy TrEMBL
Match: A0A6J1HHP1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464166 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 212/249 (85.14%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 1   MSANPSTSGGG-GPGTASAGGGVG-GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60
           MSANPSTSGGG G G    G G G GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH
Sbjct: 1   MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAH 60

Query: 61  FAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVS 120
           FAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQQVVS
Sbjct: 61  FAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVS 120

Query: 121 LQAELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLF 180
           LQAEL+YLQA LA+LELPSPPNPPPPPPPPSF G   PLSISDLPS  SLPATYDLSSLF
Sbjct: 121 LQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG-VPPLSISDLPSPPSLPATYDLSSLF 180

Query: 181 DPMAQPAWAMQQQRLDPRQFAGGGGGS------STAAGEGDLQALARELLHRHGAPPCSG 240
           DPMAQPAW + QQRLDPRQF GGGGGS      ST AGEGDLQALARELLHRHGAPP S 
Sbjct: 181 DPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSD 240

Query: 241 ASSPQSLSK 242
           +SSP S+SK
Sbjct: 241 SSSPPSVSK 248

[Close]

BLAST of HG10010853 vs. ExPASy TrEMBL
Match: A0A6J1H4Q1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460030 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.7e-103
Identity = 208/242 (85.95%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFA 60
           MSANPSTSGGGG      GGG GGGGGGPCGACKFLRRKC+PGCIFAPYFDSEQGA HFA
Sbjct: 1   MSANPSTSGGGG------GGGGGGGGGGPCGACKFLRRKCIPGCIFAPYFDSEQGAGHFA 60

Query: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQ 120
           AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYE+QARLRDPVYGCVAHIFALQ+QVVSLQ
Sbjct: 61  AVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQRQVVSLQ 120

Query: 121 AELTYLQAHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDP 180
           AEL+YLQAHLATLELPS      PPPPP+F   Q P+SISDLPSASSLP TYDLSSLFDP
Sbjct: 121 AELSYLQAHLATLELPS------PPPPPNF-AVQPPVSISDLPSASSLPVTYDLSSLFDP 180

Query: 181 MAQPAWAMQQQRLDPRQF-AGGGGGSSTAAGEGDLQALARELLHRHGAPPCSGASSPQSL 240
           MAQPAWAMQQQRLD RQF +GG GGSST AGEGDLQALAR LLHRHG PPCS ASSP SL
Sbjct: 181 MAQPAWAMQQQRLDHRQFSSGGAGGSSTTAGEGDLQALARALLHRHGGPPCSDASSPPSL 229

Query: 241 SK 242
           SK
Sbjct: 241 SK 229

[Close]

BLAST of HG10010853 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-75
Identity = 162/232 (69.83%), Postives = 183/232 (78.88%), Query Frame = 0


Query: 9   GGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGA 68
           G GG G++  GG  GGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A+FAAVHKVFGA
Sbjct: 17  GCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGA 76

Query: 69  SNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQA 128
           SNVSKLLLHIPVH+R DAVVTICYEAQAR+RDP+YGCVAHIFALQQQVV+LQAE++YLQA
Sbjct: 77  SNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQA 136

Query: 129 HLATLELPSPPNPPPPPPPPS--FPGQQTPLSISDLP-SASSLPATYDLSSLFD-PMAQP 188
           HLA+LELP P   P P P P   F     PL+I+DLP S S LP+TYDL+S+FD   +  
Sbjct: 137 HLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIFDQTTSSS 196

Query: 189 AWAMQQQR-LDPR-QFAGGGGGSSTAAGEG-----DLQALARELLHRHGAPP 230
           AWA QQ+R +DPR Q+      SS A G G     DLQALA ELLHR G+PP
Sbjct: 197 AWATQQRRFIDPRHQYGVSSSSSSVAVGLGGENSHDLQALAHELLHRQGSPP 248

[Close]

BLAST of HG10010853 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 252.3 bits (643), Expect = 3.9e-67
Identity = 150/233 (64.38%), Postives = 168/233 (72.10%), Query Frame = 0


Query: 8   SGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFG 67
           S  G P ++S      GGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFG
Sbjct: 2   SSSGNPSSSS------GGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFG 61

Query: 68  ASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQ 127
           ASNVSKLL H+P HKR DAVV+IC+EAQARLRDP+YGCV+HI +LQQQVVSLQ EL+YLQ
Sbjct: 62  ASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQ 121

Query: 128 AHLATLELPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWA 187
           AHLATLEL   P P PP  P S  G    LSI+DLP+ S  P+ YDLSS+F+P+    WA
Sbjct: 122 AHLATLEL---PQPQPPQVPVSSSGSLQALSITDLPTIS--PSVYDLSSIFEPVMSSTWA 181

Query: 188 MQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLH--RHGAPPCSGASSPQS 239
           MQQQ   P     G   SS   G G+LQALARE +H  +  A P  G S   S
Sbjct: 182 MQQQP-RPSDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

[Close]

BLAST of HG10010853 vs. TAIR 10
Match: AT4G00210.1 (LOB domain-containing protein 31 )

HSP 1 Score: 174.9 bits (442), Expect = 8.0e-44
Identity = 105/211 (49.76%), Postives = 134/211 (63.51%), Query Frame = 0


Query: 25  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRL 84
           G GGPCGACKFLRRKCV  C+FAPYFDS +G +HF AVHKVFGASN SKLL+ IP  +RL
Sbjct: 7   GCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRL 66

Query: 85  DAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLELPSPPNPPPP 144
           DAVVT+ YEA ARLRDPVYGCV HIFALQ QV++LQAEL Y+Q  L+TL+         P
Sbjct: 67  DAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQLSTLQ-------GLP 126

Query: 145 PPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQ------- 204
           PP      +    S S++P  SS+ +  ++SS    +  P  + QQ++  P++       
Sbjct: 127 PPNSQNNSRTEAASSSNVPLISSVDSKDNMSSSSSHI--PCMSQQQEQEQPKEAIEVPTE 186

Query: 205 ---FAGGGGGSSTAAGEGDLQALARELLHRH 226
               +   G  +    +GDL ALARE   ++
Sbjct: 187 SVDLSTFFGLENPVDEDGDLNALAREFFTKY 208

[Close]

BLAST of HG10010853 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 172.9 bits (437), Expect = 3.0e-43
Identity = 106/211 (50.24%), Postives = 129/211 (61.14%), Query Frame = 0


Query: 15  TASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 74
           T +  GG G GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+
Sbjct: 3   TGNLNGG-GRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKM 62

Query: 75  LLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLE 134
           LL +P+HKRLDAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL ++QA L+T++
Sbjct: 63  LLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQ 122

Query: 135 LPSPPNPPPPPPPPSFPGQQTPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLD 194
              P   P    PPS                            FDP     +AM+   LD
Sbjct: 123 -RFPLQSPQQMQPPS----------------------------FDPAHNNEYAMEPSNLD 181

Query: 195 PRQFAGGGGGSSTAAGEGDLQALARELLHRH 226
                G         G+GD Q LA + + R+
Sbjct: 183 --SVWGEEHLLQDGTGDGDFQELASQFVSRY 181

[Close]

BLAST of HG10010853 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 168.3 bits (425), Expect = 7.5e-42
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 16  ASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL 75
           AS+G G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 76  LHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLA 132
           L++P+H R +AVVTI YEAQARL DPVYGCV+HIFALQQQV  LQ+++  ++A +A
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

The following BLAST results are available for this feature:

BLAST of HG10010853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145058.1	2.1e-118	95.85	LOB domain-containing protein 18 [Cucumis sativus] >KGN46236.1 hypothetical prot...	[more]
KAA0040004.1	6.0e-118	95.85	LOB domain-containing protein 18-like [Cucumis melo var. makuwa] >TYK24497.1 LOB...	[more]
XP_023548284.1	1.0e-104	87.19	LOB domain-containing protein 18 [Cucurbita pepo subsp. pepo]	[more]
KAG7026047.1	2.2e-104	84.58	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6593707.1	2.2e-104	84.58	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of HG10010853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22131	2.5e-74	69.83	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
O81323	5.5e-66	64.38	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
O81322	1.1e-42	49.76	LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 S...	[more]
O22132	4.3e-42	50.24	LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 S...	[more]
Q9SLB7	1.1e-40	71.55	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of HG10010853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN5	1.0e-118	95.85	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV...	[more]
A0A5D3DLI5	2.9e-118	95.85	LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1KML3	4.1e-104	84.46	LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11149469...	[more]
A0A6J1HHP1	1.2e-103	85.14	LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464...	[more]
A0A6J1H4Q1	7.7e-103	85.95	LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460...	[more]

BLAST of HG10010853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45420.1	1.8e-75	69.83	LOB domain-containing protein 18	[more]
AT4G00220.1	3.9e-67	64.38	Lateral organ boundaries (LOB) domain family protein	[more]
AT4G00210.1	8.0e-44	49.76	LOB domain-containing protein 31	[more]
AT2G45410.1	3.0e-43	50.24	LOB domain-containing protein 19	[more]
AT2G42430.1	7.5e-42	71.55	lateral organ boundaries-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 29..127 e-value: 2.6E-38 score: 130.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 28..130 score: 22.913572
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..153
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..227
None	No IPR available	PANTHER	PTHR31529:SF4	LOB DOMAIN-CONTAINING PROTEIN 18	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010853.1	HG10010853.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus