HG10010841 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010841
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	arginase 1, mitochondrial-like
Location	Chr06: 26386524 .. 26386685 (+)
RNA-Seq Expression	HG10010841
Synteny	HG10010841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGTGTTAGGACGGAGAGGAATTCATTACTTTCAGAAACTAAATTCTGCAAATATTCCCACCGCATTGATTGAGAAGGGTCAAAATCGTGTTATTGAAGCATCTCTAACACTCATTCGCGAGAGAGCAAAGCTCAAGGTATGCTGGTCTGAGGAATAA

mRNA sequence

ATGTCAGTGTTAGGACGGAGAGGAATTCATTACTTTCAGAAACTAAATTCTGCAAATATTCCCACCGCATTGATTGAGAAGGGTCAAAATCGTGTTATTGAAGCATCTCTAACACTCATTCGCGAGAGAGCAAAGCTCAAGGTATGCTGGTCTGAGGAATAA

Coding sequence (CDS)

ATGTCAGTGTTAGGACGGAGAGGAATTCATTACTTTCAGAAACTAAATTCTGCAAATATTCCCACCGCATTGATTGAGAAGGGTCAAAATCGTGTTATTGAAGCATCTCTAACACTCATTCGCGAGAGAGCAAAGCTCAAGGTATGCTGGTCTGAGGAATAA

Protein sequence

MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLKVCWSEE

Homology

[Close]

BLAST of HG10010841 vs. NCBI nr
Match: XP_038875641.1 (arginase 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 92.8 bits (229), Expect = 9.4e-16
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. NCBI nr
Match: XP_038906761.1 (arginase 1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 92.8 bits (229), Expect = 9.4e-16
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. NCBI nr
Match: XP_023000235.1 (arginase 1, mitochondrial [Cucurbita maxima] >XP_023000236.1 arginase 1, mitochondrial [Cucurbita maxima] >XP_023000237.1 arginase 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLN+ANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNAANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. NCBI nr
Match: KAG6593716.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1   MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
           MSVLGRRGIHYFQKLN+ANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 728 MSVLGRRGIHYFQKLNAANIPTALIEKGQNRVIEASLTLIRERAKLK 774

[Close]

BLAST of HG10010841 vs. NCBI nr
Match: XP_022964547.1 (arginase 1, mitochondrial-like [Cucurbita moschata] >XP_022964548.1 arginase 1, mitochondrial-like [Cucurbita moschata] >XP_022964549.1 arginase 1, mitochondrial-like [Cucurbita moschata] >KAG7026054.1 Arginase 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLN+ANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNAANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. ExPASy Swiss-Prot
Match: G7JFU5 (Arginase, mitochondrial OS=Medicago truncatula OX=3880 GN=ARGAH PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.9e-11
Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MS + RRG HY Q+LNSAN+  AL+EK QNRVI+A+LT IRERAK K
Sbjct: 1  MSTIARRGFHYMQRLNSANVSPALLEKAQNRVIDAALTFIRERAKFK 47

[Close]

BLAST of HG10010841 vs. ExPASy Swiss-Prot
Match: P46637 (Arginase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ARGAH1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.1e-09
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 3  VLGRRGIHYFQKLNSA---NIPTALIEKGQNRVIEASLTLIRERAKLK 48
          ++GR+GI+Y  +LNSA   ++  + IEKGQNRVI+ASLTLIRERAKLK
Sbjct: 4  IIGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLK 51

[Close]

BLAST of HG10010841 vs. ExPASy Swiss-Prot
Match: Q9ZPF5 (Arginase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ARGAH2 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.0e-09
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 4  LGRRGIHYFQKLNSA------NIPTALIEKGQNRVIEASLTLIRERAKLK 48
          +G+RG+ YFQ+L +A      ++PT+L+E GQNRVI+ASLTLIRERAKLK
Sbjct: 4  IGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLK 53

[Close]

BLAST of HG10010841 vs. ExPASy Swiss-Prot
Match: B8AU84 (Arginase 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=B0616E02-H0507E05.7 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-07
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 5  GRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          G R IH+ ++L++A + T  +E+GQ+RVI+ASLTLIRERAKLK
Sbjct: 7  GTRWIHHVRRLSAAKVSTDALERGQSRVIDASLTLIRERAKLK 49

[Close]

BLAST of HG10010841 vs. ExPASy Swiss-Prot
Match: Q7X7N2 (Arginase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ARG1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.3e-07
Identity = 25/43 (58.14%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 5  GRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          G R IH+ ++L++A +    +E+GQ+RVI+ASLTLIRERAKLK
Sbjct: 7  GTRWIHHVRRLSAAKVSADALERGQSRVIDASLTLIRERAKLK 49

[Close]

BLAST of HG10010841 vs. ExPASy TrEMBL
Match: A0A6J1KHS8 (arginase 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111494518 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLN+ANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNAANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. ExPASy TrEMBL
Match: A0A6J1HNJ6 (arginase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464541 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLN+ANIPTALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNAANIPTALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. ExPASy TrEMBL
Match: A0A5D3DLV7 (Arginase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00540 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLNSANIP+ALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNSANIPSALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. ExPASy TrEMBL
Match: A0A0A0KCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077980 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLNSANIP+ALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNSANIPSALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. ExPASy TrEMBL
Match: A0A1S3CC82 (arginase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499015 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0


Query: 1  MSVLGRRGIHYFQKLNSANIPTALIEKGQNRVIEASLTLIRERAKLK 48
          MSVLGRRGIHYFQKLNSANIP+ALIEKGQNRVIEASLTLIRERAKLK
Sbjct: 1  MSVLGRRGIHYFQKLNSANIPSALIEKGQNRVIEASLTLIRERAKLK 47

[Close]

BLAST of HG10010841 vs. TAIR 10
Match: AT4G08900.1 (arginase )

HSP 1 Score: 61.6 bits (148), Expect = 2.2e-10
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0


Query: 3  VLGRRGIHYFQKLNSA---NIPTALIEKGQNRVIEASLTLIRERAKLK 48
          ++GR+GI+Y  +LNSA   ++  + IEKGQNRVI+ASLTLIRERAKLK
Sbjct: 4  IIGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLK 51

[Close]

BLAST of HG10010841 vs. TAIR 10
Match: AT4G08870.1 (Arginase/deacetylase superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-10
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 4  LGRRGIHYFQKLNSA------NIPTALIEKGQNRVIEASLTLIRERAKLK 48
          +G+RG+ YFQ+L +A      ++PT+L+E GQNRVI+ASLTLIRERAKLK
Sbjct: 4  IGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLK 53

[Close]

BLAST of HG10010841 vs. TAIR 10
Match: AT4G08870.2 (Arginase/deacetylase superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-10
Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 0


Query: 4  LGRRGIHYFQKLNSA------NIPTALIEKGQNRVIEASLTLIRERAKLK 48
          +G+RG+ YFQ+L +A      ++PT+L+E GQNRVI+ASLTLIRERAKLK
Sbjct: 4  IGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLK 53

The following BLAST results are available for this feature:

BLAST of HG10010841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875641.1	9.4e-16	100.00	arginase 1, mitochondrial [Benincasa hispida]	[more]
XP_038906761.1	9.4e-16	100.00	arginase 1, mitochondrial-like [Benincasa hispida]	[more]
XP_023000235.1	2.1e-15	97.87	arginase 1, mitochondrial [Cucurbita maxima] >XP_023000236.1 arginase 1, mitocho...	[more]
KAG6593716.1	2.1e-15	97.87	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022964547.1	2.1e-15	97.87	arginase 1, mitochondrial-like [Cucurbita moschata] >XP_022964548.1 arginase 1, ...	[more]

BLAST of HG10010841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G7JFU5	1.9e-11	68.09	Arginase, mitochondrial OS=Medicago truncatula OX=3880 GN=ARGAH PE=1 SV=2	[more]
P46637	3.1e-09	64.58	Arginase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ARGAH1 PE=1 SV=1	[more]
Q9ZPF5	4.0e-09	62.00	Arginase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ARGAH...	[more]
B8AU84	2.2e-07	60.47	Arginase 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=B0616E02-H05...	[more]
Q7X7N2	8.3e-07	58.14	Arginase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ARG1 PE=2 ...	[more]

BLAST of HG10010841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHS8	1.0e-15	97.87	arginase 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111494518 PE=3 SV=1	[more]
A0A6J1HNJ6	1.0e-15	97.87	arginase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464541 PE=...	[more]
A0A5D3DLV7	1.3e-15	97.87	Arginase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00540 PE=...	[more]
A0A0A0KCX8	1.3e-15	97.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077980 PE=3 SV=1	[more]
A0A1S3CC82	1.3e-15	97.87	arginase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499015 PE=3 SV=1	[more]

BLAST of HG10010841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08900.1	2.2e-10	64.58	arginase	[more]
AT4G08870.1	2.8e-10	62.00	Arginase/deacetylase superfamily protein	[more]
AT4G08870.2	2.8e-10	62.00	Arginase/deacetylase superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010841.1	HG10010841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
molecular_function	GO:0046872	metal ion binding