HG10010786 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010786
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING/U-box superfamily protein
Location	Chr06: 25871034 .. 25871711 (+)
RNA-Seq Expression	HG10010786
Synteny	HG10010786

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACATATTGAAGAAGCCATTGCAGGCCATAAAACAAGAAGATTTGAAAGCCCTAACAATTCTCTATGATTGTGAATTATGCCATTTCCAATTCTCATCCTCATTGAAACTCACTGACAATTGCTCTCATACAATATGCAAACAATGCATTTCCAACCACATCAACTCAAAGCTTGAGATCGGCGCCATTGAGATCGTCTGCCCCGTCGCCGACTGCAAGGCGATTCTCGACCCGGTCTTGTGCCGTGACATGGTCGACGATCTGCCTTACCAGCAGTGGCTGGATCGCCTCTGCTGCAACACAATTGCCGGGCGGAGGAAATGCTATTGCCCTTACATAAATTGTAGGGCTTTGATCATCGACGAATGCAGCGGGCCGAGGTCGTTTGCGACGAAGTCGAAGTGTCCGGAATGCAAGGAGTGGGTGTGCTTCTCGTGCCAGACGGGGTGGCACGAAGGCGAAGCGTGTGATGTGCGAAGAAGAAGTGTTATTATAAGTATGAATGATATATTGTTCATGGGAATGATTGTAGGAAAGAACAAGAAGATTTCTTGTTGCCCTAAATGCCGAATGTATACTCAGCTTGTTCCTAAGATTGGCTTCTGCATTGTTAGTTGCAGGTACTTGCTTTTTCTAATGCTTCATAAAACTATATTTCATAGAATTTCTTAG

mRNA sequence

ATGGGCAACATATTGAAGAAGCCATTGCAGGCCATAAAACAAGAAGATTTGAAAGCCCTAACAATTCTCTATGATTGTGAATTATGCCATTTCCAATTCTCATCCTCATTGAAACTCACTGACAATTGCTCTCATACAATATGCAAACAATGCATTTCCAACCACATCAACTCAAAGCTTGAGATCGGCGCCATTGAGATCGTCTGCCCCGTCGCCGACTGCAAGGCGATTCTCGACCCGGTCTTGTGCCGTGACATGGTCGACGATCTGCCTTACCAGCAGTGGCTGGATCGCCTCTGCTGCAACACAATTGCCGGGCGGAGGAAATGCTATTGCCCTTACATAAATTGTAGGGCTTTGATCATCGACGAATGCAGCGGGCCGAGGTCGTTTGCGACGAAGTCGAAGTGTCCGGAATGCAAGGAGTGGGTGTGCTTCTCGTGCCAGACGGGGTGGCACGAAGGCGAAGCGTGTGATGTGCGAAGAAGAAGTGTTATTATAAGTATGAATGATATATTGTTCATGGGAATGATTGTAGGAAAGAACAAGAAGATTTCTTGTTGCCCTAAATGCCGAATGTATACTCAGCTTGTTCCTAAGATTGGCTTCTGCATTGTTAGTTGCAGGTACTTGCTTTTTCTAATGCTTCATAAAACTATATTTCATAGAATTTCTTAG

Coding sequence (CDS)

ATGGGCAACATATTGAAGAAGCCATTGCAGGCCATAAAACAAGAAGATTTGAAAGCCCTAACAATTCTCTATGATTGTGAATTATGCCATTTCCAATTCTCATCCTCATTGAAACTCACTGACAATTGCTCTCATACAATATGCAAACAATGCATTTCCAACCACATCAACTCAAAGCTTGAGATCGGCGCCATTGAGATCGTCTGCCCCGTCGCCGACTGCAAGGCGATTCTCGACCCGGTCTTGTGCCGTGACATGGTCGACGATCTGCCTTACCAGCAGTGGCTGGATCGCCTCTGCTGCAACACAATTGCCGGGCGGAGGAAATGCTATTGCCCTTACATAAATTGTAGGGCTTTGATCATCGACGAATGCAGCGGGCCGAGGTCGTTTGCGACGAAGTCGAAGTGTCCGGAATGCAAGGAGTGGGTGTGCTTCTCGTGCCAGACGGGGTGGCACGAAGGCGAAGCGTGTGATGTGCGAAGAAGAAGTGTTATTATAAGTATGAATGATATATTGTTCATGGGAATGATTGTAGGAAAGAACAAGAAGATTTCTTGTTGCCCTAAATGCCGAATGTATACTCAGCTTGTTCCTAAGATTGGCTTCTGCATTGTTAGTTGCAGGTACTTGCTTTTTCTAATGCTTCATAAAACTATATTTCATAGAATTTCTTAG

Protein sequence

MGNILKKPLQAIKQEDLKALTILYDCELCHFQFSSSLKLTDNCSHTICKQCISNHINSKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGMIVGKNKKISCCPKCRMYTQLVPKIGFCIVSCRYLLFLMLHKTIFHRIS

Homology

[Close]

BLAST of HG10010786 vs. NCBI nr
Match: XP_006362044.1 (PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Solanum tuberosum])

HSP 1 Score: 147.1 bits (370), Expect = 1.8e-31
Identity = 78/212 (36.79%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELCHFQF---SSSLKLTDNCSHTICKQCISNHIN 60
           MGN L+K    I++++L   +  + C++C       S+  K  + C H  C  CI+ +I+
Sbjct: 1   MGNTLQK----IQEDELPDESQPFCCKICMEPLLLPSTKFKNQNLCVHPFCIDCITRYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            KL    IEI CP   C   LDP+ CR++VD   + +W ++LC  ++ G  +CYCP  NC
Sbjct: 61  VKLVDNVIEIPCPFPTCNQFLDPIGCRNLVDSELFDKWSEKLCEYSVLGLTRCYCPNRNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
            ALI+DEC G    AT+SKCP CK   CF C+  WH    C+      +   ND++F  +
Sbjct: 121 SALILDECGG---VATRSKCPNCKRLFCFQCKLPWHAVFQCE--ESGALRDKNDVVFGKL 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSCR 210
              + KK   CPKCR + QL     F    CR
Sbjct: 181 --AERKKWQRCPKCRSFVQLSDGCRFITCRCR 201

[Close]

BLAST of HG10010786 vs. NCBI nr
Match: PIA50525.1 (hypothetical protein AQUCO_01300932v1 [Aquilegia coerulea])

HSP 1 Score: 146.0 bits (367), Expect = 4.0e-31
Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 0


Query: 10  QAIKQEDLKALTILYDCELCHFQFSSSLKLTDN---CSHTICKQCISNHINSKL-EIGAI 69
           Q  +QE+ +  T  +DC +C    SS  + T+     +H+ C  CI NHI +KL +    
Sbjct: 20  QQQQQEEEQDDTSSFDCAICLNYVSSKRRFTNENRCLAHSYCLDCIQNHIQAKLDDYNIA 79

Query: 70  EIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDEC 129
           EI CP  DC  +LDP++CR ++    +++W D+LC +T+   +K YCP  NC  LI++EC
Sbjct: 80  EIKCPALDCNEVLDPLVCRSVLSPRVFEKWCDKLCESTLTQCQKAYCPLQNCSTLILNEC 139

Query: 130 SGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGMIVGKNKKI 189
               +  TKS CP CK   CF+C+  WH G +CD  R   +   NDILF  ++  + ++ 
Sbjct: 140 ---EASVTKSNCPVCKRVFCFNCERPWHAGYSCDEARG--MTDRNDILFGALM--ETRRW 199

Query: 190 SCCPKCRMYTQLVPKIGFCIVSCRY 211
             CP C+   +L+   G  I+ CRY
Sbjct: 200 QRCPVCKHCVELIS--GCSIIVCRY 215

[Close]

BLAST of HG10010786 vs. NCBI nr
Match: XP_015082762.1 (probable E3 ubiquitin-protein ligase RNF217 [Solanum pennellii])

HSP 1 Score: 145.6 bits (366), Expect = 5.2e-31
Identity = 79/214 (36.92%), Postives = 113/214 (52.80%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELCHFQF---SSSLKLTDNCSHTICKQCISNHIN 60
           MGN LKK     ++ +L   +  + C++C       S+  K  + C H  C  CI+ +I+
Sbjct: 1   MGNALKK----FQEHELADESQPFCCKICMEPMLLPSTKFKNQNLCVHPFCIDCITTYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            KL    +EI CP  +C   LDP+ CR+++D   + +W ++LC  ++ G  +CYCPY NC
Sbjct: 61  VKLVDNVVEIPCPFPNCNHFLDPIGCRNLMDSDLFDKWSEKLCEYSVLGLTRCYCPYQNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
            ALI+DEC G    AT SKCP CK   CF C+  WH G  C+      +   ND  F GM
Sbjct: 121 SALILDECGG---VATLSKCPNCKRLFCFRCKIPWHAGFQCE--ESGALRDENDFTF-GM 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSCRYL 212
           +  + +K   CPKCR + QL          CRY+
Sbjct: 181 L-AEREKWQRCPKCRSFVQLSE-------GCRYI 196

[Close]

BLAST of HG10010786 vs. NCBI nr
Match: XP_016582061.1 (PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Capsicum annuum])

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-30
Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELC---HFQFSSSLKLTDNCSHTICKQCISNHIN 60
           MGN L+K         L+  +  + CE+C       S   K  + C H  C  CI  +I+
Sbjct: 1   MGNTLRK---------LRDKSQPFSCEICMEPMLLASKKFKNQNRCIHPFCIDCIVKYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            K+E   +EI CP  +C   LDP+ CR++V    + +W D+LC + + G   CYCP  NC
Sbjct: 61  FKVEDNVVEIRCPSLNCNNFLDPIFCRNLVGPELFVKWSDKLCESYVLGLTHCYCPNKNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
             LI+DEC G    A +S+CP CK + CF C+  WH G  C+ RR   ++  ND+ F  +
Sbjct: 121 SILILDECGGN---AKQSQCPNCKRFFCFQCKLPWHAGFKCEERRE--LMDKNDVAF--V 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSC 209
           ++ +  K   CP+CR++   +    F +  C
Sbjct: 181 VLAQRNKWKRCPRCRIFVSRIQGCQFIVCRC 195

[Close]

BLAST of HG10010786 vs. NCBI nr
Match: PHT93501.1 (hypothetical protein T459_01383, partial [Capsicum annuum])

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-30
Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELC---HFQFSSSLKLTDNCSHTICKQCISNHIN 60
           MGN L+K         L+  +  + CE+C       S   K  + C H  C  CI  +I+
Sbjct: 1   MGNTLRK---------LRDKSQPFSCEICMEPMLLASKKFKNQNRCIHPFCIDCIVKYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            K+E   +EI CP  +C   LDP+ CR++V    + +W D+LC + + G   CYCP  NC
Sbjct: 61  FKVEDNVVEIRCPSLNCNNFLDPIFCRNLVGPELFVKWSDKLCESYVLGLTHCYCPNKNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
             LI+DEC G    A +S+CP CK + CF C+  WH G  C+ RR   ++  ND+ F  +
Sbjct: 121 SILILDECGGN---AKQSQCPNCKRFFCFQCKLPWHAGFKCEERRE--LMDKNDVAF--V 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSC 209
           ++ +  K   CP+CR++   +    F +  C
Sbjct: 181 VLAQRNKWKRCPRCRIFVSRIQGCQFIVCRC 195

[Close]

BLAST of HG10010786 vs. ExPASy Swiss-Prot
Match: D3YYI7 (Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus OX=10090 GN=Rnf217 PE=3 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 9.9e-09
Identity = 40/165 (24.24%), Postives = 76/165 (46.06%), Query Frame = 0


Query: 43  CSHTICKQCISNHINSKLEIGAIEIVCPVADCKAILDP---VLCRDMVDDLPYQQWLD-- 102
           C   +C++C+  +++S++++G +EI CPV +C   L+    V      D + Y+ +L+  
Sbjct: 251 CKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTVVYNLTHEDSIKYKYFLELG 310

Query: 103 RLCCNTIAGRRKCYCPYINCRALIIDECSGPRSFATKS------KCPECKEWVCFSCQTG 162
           R+  +T        CP   C+     +  G     ++S      +CP C+   CF C + 
Sbjct: 311 RIDSSTKP------CP--QCKHFTTFKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSP 370

Query: 163 WHEGEACDVRRRSVIISMNDILFMGMIVGKNKKISCCPKCRMYTQ 197
           WHEG  C   ++   +  +   +   I    +    CPKC+++ Q
Sbjct: 371 WHEGVNCKEYKKGDKLLRH---WASEIEHGQRNAQKCPKCKIHIQ 404

[Close]

BLAST of HG10010786 vs. ExPASy TrEMBL
Match: A0A2G5E435 (RING-type domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01300932v1 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 0


Query: 10  QAIKQEDLKALTILYDCELCHFQFSSSLKLTDN---CSHTICKQCISNHINSKL-EIGAI 69
           Q  +QE+ +  T  +DC +C    SS  + T+     +H+ C  CI NHI +KL +    
Sbjct: 20  QQQQQEEEQDDTSSFDCAICLNYVSSKRRFTNENRCLAHSYCLDCIQNHIQAKLDDYNIA 79

Query: 70  EIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDEC 129
           EI CP  DC  +LDP++CR ++    +++W D+LC +T+   +K YCP  NC  LI++EC
Sbjct: 80  EIKCPALDCNEVLDPLVCRSVLSPRVFEKWCDKLCESTLTQCQKAYCPLQNCSTLILNEC 139

Query: 130 SGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGMIVGKNKKI 189
               +  TKS CP CK   CF+C+  WH G +CD  R   +   NDILF  ++  + ++ 
Sbjct: 140 ---EASVTKSNCPVCKRVFCFNCERPWHAGYSCDEARG--MTDRNDILFGALM--ETRRW 199

Query: 190 SCCPKCRMYTQLVPKIGFCIVSCRY 211
             CP C+   +L+   G  I+ CRY
Sbjct: 200 QRCPVCKHCVELIS--GCSIIVCRY 215

[Close]

BLAST of HG10010786 vs. ExPASy TrEMBL
Match: A0A0V0HAM4 (Putative E3 ubiquitin-protein ligase ARI3-like (Fragment) OS=Solanum chacoense OX=4108 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31
Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 34  SSSLKLTDNCSHTICKQCISNHINSKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQ 93
           S+  K  + C H  C  CI+ +I+ +L    +EI CP   C   LDP+ CRD+VD   + 
Sbjct: 8   STKFKNQNLCVHPFCIDCITRYISVELVDNVVEIPCPFPTCNQFLDPIGCRDLVDSELFD 67

Query: 94  QWLDRLCCNTIAGRRKCYCPYINCRALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWH 153
           +W ++LC  ++ G  +CYCP  NC ALI+DEC G    AT+SKCP CK   CF C+  WH
Sbjct: 68  KWSEKLCEYSVLGLTRCYCPNRNCSALILDECGG---VATRSKCPNCKRLFCFQCKLPWH 127

Query: 154 EGEACDVRRRSVIISMNDILFMGMIVGKNKKISCCPKCRMYTQLVPKIGFCIVSCR 210
            G  C+      +   ND+ F  +   + KK   CPKCR + QL     F    CR
Sbjct: 128 AGFQCE--ESGALRDKNDVAFGKL--AERKKWQRCPKCRSFVQLSEGCRFITCRCR 176

[Close]

BLAST of HG10010786 vs. ExPASy TrEMBL
Match: A0A1U8HFA4 (probable E3 ubiquitin-protein ligase RNF217 OS=Capsicum annuum OX=4072 GN=LOC107879551 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31
Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELC---HFQFSSSLKLTDNCSHTICKQCISNHIN 60
           MGN L+K         L+  +  + CE+C       S   K  + C H  C  CI  +I+
Sbjct: 1   MGNTLRK---------LRDKSQPFSCEICMEPMLLASKKFKNQNRCIHPFCIDCIVKYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            K+E   +EI CP  +C   LDP+ CR++V    + +W D+LC + + G   CYCP  NC
Sbjct: 61  FKVEDNVVEIRCPSLNCNNFLDPIFCRNLVGPELFVKWSDKLCESYVLGLTHCYCPNKNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
             LI+DEC G    A +S+CP CK + CF C+  WH G  C+ RR   ++  ND+ F  +
Sbjct: 121 SILILDECGGN---AKQSQCPNCKRFFCFQCKLPWHAGFKCEERRE--LMDKNDVAF--V 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSC 209
           ++ +  K   CP+CR++   +    F +  C
Sbjct: 181 VLAQRNKWKRCPRCRIFVSRIQGCQFIVCRC 195

[Close]

BLAST of HG10010786 vs. ExPASy TrEMBL
Match: A0A2G3AGY0 (Uncharacterized protein (Fragment) OS=Capsicum annuum OX=4072 GN=T459_01383 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31
Identity = 72/211 (34.12%), Postives = 109/211 (51.66%), Query Frame = 0


Query: 1   MGNILKKPLQAIKQEDLKALTILYDCELC---HFQFSSSLKLTDNCSHTICKQCISNHIN 60
           MGN L+K         L+  +  + CE+C       S   K  + C H  C  CI  +I+
Sbjct: 1   MGNTLRK---------LRDKSQPFSCEICMEPMLLASKKFKNQNRCIHPFCIDCIVKYIS 60

Query: 61  SKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINC 120
            K+E   +EI CP  +C   LDP+ CR++V    + +W D+LC + + G   CYCP  NC
Sbjct: 61  FKVEDNVVEIRCPSLNCNNFLDPIFCRNLVGPELFVKWSDKLCESYVLGLTHCYCPNKNC 120

Query: 121 RALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGM 180
             LI+DEC G    A +S+CP CK + CF C+  WH G  C+ RR   ++  ND+ F  +
Sbjct: 121 SILILDECGGN---AKQSQCPNCKRFFCFQCKLPWHAGFKCEERRE--LMDKNDVAF--V 180

Query: 181 IVGKNKKISCCPKCRMYTQLVPKIGFCIVSC 209
           ++ +  K   CP+CR++   +    F +  C
Sbjct: 181 VLAQRNKWKRCPRCRIFVSRIQGCQFIVCRC 195

[Close]

BLAST of HG10010786 vs. ExPASy TrEMBL
Match: A0A2G5E450 (RING-type domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01300932v1 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 74/204 (36.27%), Postives = 113/204 (55.39%), Query Frame = 0


Query: 10  QAIKQEDLKALTILYDCELCHFQFSSSLKLTDN---CSHTICKQCISNHINSKL-EIGAI 69
           Q  +QE+ +  T  +DC +C    SS  + T+     +H+ C  CI NHI +KL +    
Sbjct: 20  QQQQQEEEQDDTSSFDCAICLNYVSSKRRFTNENRCLAHSYCLDCIQNHIQAKLDDYNIA 79

Query: 70  EIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDEC 129
           EI CP  DC  +LDP++CR ++    +++W D+LC +T+   +K YCP  NC  LI++EC
Sbjct: 80  EIKCPALDCNEVLDPLVCRSVLSPRVFEKWCDKLCESTLTQCQKAYCPLQNCSTLILNEC 139

Query: 130 SGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVIISMNDILFMGMIVGKNKKI 189
               +  TKS CP CK   CF+C+  WH G +CD  R   +   NDILF  ++  + ++ 
Sbjct: 140 ---EASVTKSNCPVCKRVFCFNCERPWHAGYSCDEARG--MTDRNDILFGALM--ETRRW 199

Query: 190 SCCPKCRMYTQLVPKIGFCIVSCR 210
             CP C+   +L+   G  I+ CR
Sbjct: 200 QRCPVCKHCVELIS--GCSIIVCR 214

[Close]

BLAST of HG10010786 vs. TAIR 10
Match: AT3G53690.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-25
Identity = 63/193 (32.64%), Postives = 93/193 (48.19%), Query Frame = 0


Query: 8   PLQAIKQEDLKALTILYDCELCHFQFS--SSLKLTDNCSHTICKQCISNHINSKLEIGAI 67
           P+   K +   + T  +DCE+C    S   S ++   CSH  C  C+S +I +KL+   +
Sbjct: 97  PIHREKGQSSSSKTATFDCEICVDSKSIIESFRI-GGCSHFYCNDCVSKYIAAKLQDNIL 156

Query: 68  EIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDEC 127
            I CPV+ C   L+P  CR ++    + +W D LC   +   +K YCPY +C AL+  E 
Sbjct: 157 SIECPVSGCSGRLEPDQCRQILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEE 216

Query: 128 SGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDVRRRSVI--ISMNDILFMGMIVGKNK 187
           S  +     S+CP C   VC  C T WH    C+  ++        +DIL   M   K K
Sbjct: 217 SEVK--MKDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATM--AKQK 276

Query: 188 KISCCPKCRMYTQ 197
           K   CP C+ Y +
Sbjct: 277 KWKRCPSCKFYIE 284

[Close]

BLAST of HG10010786 vs. TAIR 10
Match: AT3G14250.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 56/191 (29.32%), Postives = 93/191 (48.69%), Query Frame = 0


Query: 26  CELCHFQFSSS--LKLTDNCSHTICKQCISNHINSKLEIGAIEIVCPVADCKAILDPVLC 85
           C +C  +  SS   + T NC+H  C  C   ++ +K++  A  I CP  +C  +++P  C
Sbjct: 95  CMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEPYTC 154

Query: 86  RDMVDDLPYQQWLDRLCCNTIAGRRKCYCPYINCRALIIDECSGPRSFATKSKCPECKEW 145
           RD++    + +W   LC + I+   K YCP+ +C A++++  +G  +  T+++C  C   
Sbjct: 155 RDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDAN-VTQTECRSCHRL 214

Query: 146 VCFSCQTGWHEGEACDVRRR-----SVIISMNDILFMGMIVGKNKKISCCPKCRMYTQLV 205
            C  C+  WH G  CD  +R           +D L + M   KNK+   CP C+ Y   V
Sbjct: 215 FCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQM--AKNKQWRRCPSCKFYVDKV 274

Query: 206 PKIGFCIVSCR 210
              G   + CR
Sbjct: 275 E--GCQHIKCR 280

[Close]

BLAST of HG10010786 vs. TAIR 10
Match: AT3G45470.1 (IBR domain containing protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 41/170 (24.12%), Postives = 68/170 (40.00%), Query Frame = 0


Query: 41  DNCSHTICKQCISNHINSKLEIGAIEIVCPVADCKAILDPVLCRDMVDDLPYQQWLDRLC 100
           D C H  C  C++  +  KL  G +   C   +CK  L    C  ++     + W   + 
Sbjct: 22  DKCLHRHCYPCVNQLVEVKLRNGTVP-TCLDYECKLKLSLENCFKVLKPKVIELWKHMMK 81

Query: 101 CNTIAGRRKCYCPYINCRALIIDECSGPRSFATKSKCPECKEWVCFSCQTGWHEGEACDV 160
             +I   ++ YCPYINC  L+        + +    C +C   VC  C+  WH   +C  
Sbjct: 82  EESIPLAKRIYCPYINCSTLMSKTEISRSNKSNDRACIKCSGLVCIDCKVPWHSDLSCAE 141

Query: 161 RRRSVIISMNDILFMGMIVGKNKKISCCPKCRMYTQLVPKIGFCIVSCRY 211
            ++     + D L +  ++  ++K   C KCR   +L          C Y
Sbjct: 142 YKKLHPDPVLDDLTL-KLLANDQKWRQCVKCRHLIELNQGCNHMTCRCGY 189

The following BLAST results are available for this feature:

BLAST of HG10010786 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_006362044.1	1.8e-31	36.79	PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Solanum tuberosum]	[more]
PIA50525.1	4.0e-31	36.59	hypothetical protein AQUCO_01300932v1 [Aquilegia coerulea]	[more]
XP_015082762.1	5.2e-31	36.92	probable E3 ubiquitin-protein ligase RNF217 [Solanum pennellii]	[more]
XP_016582061.1	1.5e-30	34.12	PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Capsicum annuum]	[more]
PHT93501.1	1.5e-30	34.12	hypothetical protein T459_01383, partial [Capsicum annuum]	[more]

BLAST of HG10010786 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D3YYI7	9.9e-09	24.24	Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus OX=10090 GN=Rnf217 P...	[more]

BLAST of HG10010786 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G5E435	1.9e-31	36.59	RING-type domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_013...	[more]
A0A0V0HAM4	7.3e-31	39.20	Putative E3 ubiquitin-protein ligase ARI3-like (Fragment) OS=Solanum chacoense O...	[more]
A0A1U8HFA4	7.3e-31	34.12	probable E3 ubiquitin-protein ligase RNF217 OS=Capsicum annuum OX=4072 GN=LOC107...	[more]
A0A2G3AGY0	7.3e-31	34.12	Uncharacterized protein (Fragment) OS=Capsicum annuum OX=4072 GN=T459_01383 PE=3...	[more]
A0A2G5E450	1.3e-30	36.27	RING-type domain-containing protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_013...	[more]

BLAST of HG10010786 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53690.1	1.6e-25	32.64	RING/U-box superfamily protein	[more]
AT3G14250.1	1.2e-22	29.32	RING/U-box superfamily protein	[more]
AT3G45470.1	1.4e-10	24.12	IBR domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 23..106 e-value: 5.7E-11 score: 44.2
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 24..213
None	No IPR available	PANTHER	PTHR11685:SF146	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 24..213
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 24..100
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 43..52
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 26..71 score: 9.243618
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 22..225 score: 11.734246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010786.1	HG10010786.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0004842	ubiquitin-protein transferase activity