HG10010750 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010750
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionXyloglucan galactosyltransferase KATAMARI1-like protein
LocationChr06: 25476126 .. 25476488 (-)
RNA-Seq ExpressionHG10010750
SyntenyHG10010750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTGAGAGGCGAGGACGAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCTTCAATGTCAGTCAGCCATGGAGGTGAGGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTAAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGTGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAATACTTCATCACTTCATCAAATTCCCAAGCTATGGAAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTTCTACTCTTTCTGTTACTTTTAGAAATGAAGATGCTTCATTCTTAA

mRNA sequence

ATGGAAGTGAGAGGCGAGGACGAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCTTCAATGTCAGTCAGCCATGGAGGTGAGGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTAAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGTGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAATACTTCATCACTTCATCAAATTCCCAAGCTATGGAAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTTCTACTCTTTCTGTTACTTTTAGAAATGAAGATGCTTCATTCTTAA

Coding sequence (CDS)

ATGGAAGTGAGAGGCGAGGACGAGGCATTCGAGCGGGTGAGGTTGGAAGGTGGAAACATAGGAGCTTCAATGTCAGTCAGCCATGGAGGTGAGGGTAAATTACACAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTAAACAATTCAACATTGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGTGTTTTCTTCTTCTTTGGAGATATGGAACCAAAATCACATCAAAATAATACTTCATCACTTCATCAAATTCCCAAGCTATGGAAATGGAGTTTAATGCTTCTTCTTCTTCTTCTTCTTCTACTCTTTCTGTTACTTTTAGAAATGAAGATGCTTCATTCTTAA

Protein sequence

MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWKWSLMLLLLLLLLLFLLLLEMKMLHS
Homology
BLAST of HG10010750 vs. NCBI nr
Match: KGN46369.1 (hypothetical protein Csa_004893 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 2.9e-44
Identity = 101/123 (82.11%), Postives = 107/123 (86.99%), Query Frame = 0

Query: 1   MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
           ME R E+EA E VRLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1   MEARDENEALEGVRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61  VKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWKWSLMLLLLLLL---LLFLLLLEMKM 120
           VKMGSPGVFF FGDMEPK HQN TSSLHQ PKLW+W LM+LLLL L   LLF+LLLE+KM
Sbjct: 61  VKMGSPGVFFLFGDMEPKLHQNKTSSLHQNPKLWQWGLMILLLLFLLLPLLFMLLLEIKM 120

BLAST of HG10010750 vs. NCBI nr
Match: KAA0039894.1 (xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa] >TYK24608.1 xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 8.4e-28
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0

Query: 1  MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          ME RGEDEA ER+RLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1  MEARGEDEAPERLRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61 VKMGSPGVFFFFG 74
          VKMGSPGVFF FG
Sbjct: 61 VKMGSPGVFFLFG 73

BLAST of HG10010750 vs. NCBI nr
Match: KAG6592845.1 (hypothetical protein SDJN03_12321, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.1 bits (253), Expect = 3.5e-18
Identity = 53/63 (84.13%), Postives = 54/63 (85.71%), Query Frame = 0

Query: 1  MEVRGED--EAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNG 60
          MEV  ED   AFERVRL G NIGASMSVSHG EGKL NCCCINIYVNSNIQGVNNSTLNG
Sbjct: 1  MEVGDEDGVGAFERVRLGGRNIGASMSVSHGSEGKLPNCCCINIYVNSNIQGVNNSTLNG 60

Query: 61 SEV 62
          SE+
Sbjct: 61 SEI 63

BLAST of HG10010750 vs. NCBI nr
Match: PON31494.1 (Transmembrane protein [Trema orientale])

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-15
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0

Query: 1   MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
           M      E+FER+ LEG N GAS S+  G   + H+CCCINIY+N+N+QG NNS L GSE
Sbjct: 1   MAPEASPESFERINLEGKNSGASFSLHRGDRSESHDCCCINIYINNNVQGANNSVLYGSE 60

Query: 61  VKMGSPGVFFFFGDM----------EPKSHQNNTSSLHQIPKLWKWSLMLLLLLLL 107
           V+M  PGV  FFGD+          + + ++ +T+S   +  L+ + + +LLLL L
Sbjct: 61  VQMRDPGVHLFFGDVKLGTKTKRTNKKRKNKRSTTSTTNVGSLFAFVISILLLLSL 116

BLAST of HG10010750 vs. NCBI nr
Match: KAG6662850.1 (hypothetical protein CIPAW_03G271500 [Carya illinoinensis])

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 0

Query: 9  AFERVRLEGGNIGASMSVSHGG-EGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPG 68
          +FE V L+G NIGA+M + +G   G+ H+CCCINIY+N+NIQGVNNS L+GSEVK+  PG
Sbjct: 9  SFEHVNLKGRNIGAAMFMPNGDTRGESHDCCCINIYINNNIQGVNNSILHGSEVKLRDPG 68

Query: 69 VFFFFGDME 77
          V  FFGD++
Sbjct: 69 VSLFFGDVK 77

BLAST of HG10010750 vs. ExPASy TrEMBL
Match: A0A0A0KBZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 101/123 (82.11%), Postives = 107/123 (86.99%), Query Frame = 0

Query: 1   MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
           ME R E+EA E VRLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1   MEARDENEALEGVRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61  VKMGSPGVFFFFGDMEPKSHQNNTSSLHQIPKLWKWSLMLLLLLLL---LLFLLLLEMKM 120
           VKMGSPGVFF FGDMEPK HQN TSSLHQ PKLW+W LM+LLLL L   LLF+LLLE+KM
Sbjct: 61  VKMGSPGVFFLFGDMEPKLHQNKTSSLHQNPKLWQWGLMILLLLFLLLPLLFMLLLEIKM 120

BLAST of HG10010750 vs. ExPASy TrEMBL
Match: A0A5A7T8V9 (Xyloglucan galactosyltransferase KATAMARI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001550 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.0e-28
Identity = 65/73 (89.04%), Postives = 67/73 (91.78%), Query Frame = 0

Query: 1  MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
          ME RGEDEA ER+RLEGGN+GASMSVSHGGE KL NCCCINIYVNSNIQGVNNSTLNG E
Sbjct: 1  MEARGEDEAPERLRLEGGNMGASMSVSHGGECKLPNCCCINIYVNSNIQGVNNSTLNGGE 60

Query: 61 VKMGSPGVFFFFG 74
          VKMGSPGVFF FG
Sbjct: 61 VKMGSPGVFFLFG 73

BLAST of HG10010750 vs. ExPASy TrEMBL
Match: A0A2P5A4P7 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_357670 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.9e-16
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 0

Query: 1   MEVRGEDEAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSE 60
           M      E+FER+ LEG N GAS S+  G   + H+CCCINIY+N+N+QG NNS L GSE
Sbjct: 1   MAPEASPESFERINLEGKNSGASFSLHRGDRSESHDCCCINIYINNNVQGANNSVLYGSE 60

Query: 61  VKMGSPGVFFFFGDM----------EPKSHQNNTSSLHQIPKLWKWSLMLLLLLLL 107
           V+M  PGV  FFGD+          + + ++ +T+S   +  L+ + + +LLLL L
Sbjct: 61  VQMRDPGVHLFFGDVKLGTKTKRTNKKRKNKRSTTSTTNVGSLFAFVISILLLLSL 116

BLAST of HG10010750 vs. ExPASy TrEMBL
Match: A0A6J5VQ84 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51728 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-14
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 5  GEDEAFERVRLEGGNIGASMSVSHGGEGKLH--NCCCINIYVNSNIQGVNNSTLNGSEVK 64
          G D+ FER+ LEG N GA+  +  G   + H  +CCCINIY+NSN+QG NNS L+GS VK
Sbjct: 6  GHDDFFERINLEGKNTGAAFFIQPGSGAETHSGDCCCINIYINSNVQGANNSFLDGSCVK 65

Query: 65 MGSPGVFFFFGDME 77
          M  PGV  FFGD++
Sbjct: 66 MKDPGVHLFFGDVK 79

BLAST of HG10010750 vs. ExPASy TrEMBL
Match: W9QZM7 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015890 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 9.7e-14
Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 0

Query: 8   EAFERVRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPG 67
           E+ ER++LEG N GAS S+  G     H+CCCINIY+N+NIQG NNS L  SEV M  PG
Sbjct: 56  ESSERIKLEGINAGASFSLDRGNGAAPHDCCCINIYINNNIQGANNSLLCESEVNMRDPG 115

Query: 68  VFFFFGDME----------PKSHQNNTSSLHQIPKLWKWSLMLLLLLLL 107
           V  FFGD++           +  + +TSS + +  L+ +   +LLLL L
Sbjct: 116 VHLFFGDVKLGKRSLGRKRKREKKRSTSSAYNLGSLFAFVFSILLLLSL 164

BLAST of HG10010750 vs. TAIR 10
Match: AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 28/81 (34.57%), Postives = 42/81 (51.85%), Query Frame = 0

Query: 6   EDEAFERVRLEGGNIGASMSV----SHGGEGKL--HNCCCINIYVNSNIQGVNNSTLNGS 65
           E++    + L G N+GA+M      +HG   +   H    ++ YVNSN Q VNNS + G+
Sbjct: 46  EEDGIRVITLSGSNLGATMKTELDNNHGDRDQNGDHELDFLSTYVNSNFQAVNNSIMIGA 105

Query: 66  EVKMGSPGVFF-FFGDMEPKS 80
           + +   PGV     GD+E  S
Sbjct: 106 KYETHDPGVHLDISGDVEKPS 126

BLAST of HG10010750 vs. TAIR 10
Match: AT2G20362.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.1e-04
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0

Query: 13  VRLEGGNIGASMSVSHGGEGKLHNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGVFFFF 72
           + L G N+GA M      +    + C INIYVNSN+Q    S L GS+VK+  PGV    
Sbjct: 17  INLNGRNVGAVMVAPRDVDIASQSGCRINIYVNSNVQATCGSALIGSKVKLRDPGVHLHI 76

Query: 73  GDMEPKSHQNNTSSLHQIPKLWKWSLMLLLLL-LLLLFLLLL 114
            D+  K  +++T S  +   L K  L L+ L  + L+F+L L
Sbjct: 77  DDV--KMTRDDTISRQKEMTLIKVGLCLVCLFNMFLVFILFL 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46369.12.9e-4482.11hypothetical protein Csa_004893 [Cucumis sativus][more]
KAA0039894.18.4e-2889.04xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuw... [more]
KAG6592845.13.5e-1884.13hypothetical protein SDJN03_12321, partial [Cucurbita argyrosperma subsp. sorori... [more]
PON31494.11.6e-1543.10Transmembrane protein [Trema orientale][more]
KAG6662850.11.4e-1460.87hypothetical protein CIPAW_03G271500 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBZ51.4e-4482.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1[more]
A0A5A7T8V94.0e-2889.04Xyloglucan galactosyltransferase KATAMARI1-like protein OS=Cucumis melo var. mak... [more]
A0A2P5A4P77.9e-1643.10Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_357670 PE=4 SV=1[more]
A0A6J5VQ845.7e-1455.41Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51728 PE=4 S... [more]
W9QZM79.7e-1444.95Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G63310.11.1e-0434.57unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G20362.13.1e-0437.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472OS01G0106600 PROTEINcoord: 1..85
NoneNo IPR availablePANTHERPTHR33472:SF9OXIDOREDUCTASES, ACTING ON NADH OR NADPH-RELATEDcoord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010750.1HG10010750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016757 glycosyltransferase activity