HG10010686 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010686
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	heavy metal-associated isoprenylated plant protein 8
Location	Chr06: 24817175 .. 24817477 (+)
RNA-Seq Expression	HG10010686
Synteny	HG10010686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGTAGAAACAAATAAAGAGAGTTCAAAAGTGATAGTGAAGGGAATAGTGGATCCTCCAAAGCTAGTGGAATGTATTAAAAAGAAAATGGGAAAAAATGTTGAAATGTTCAATAAAAAACAAGAGAAACAAAGCCAACCTAATAAAGCTTCAGATCAAGACAAACCAGCCAACAAGAAAGATGCAAATCAAGACAATGAAAATTTTGTATTTAAATATCCTCCTCAATACTCTTTGCTTCATATTTACCCTAATCAAACTTTTAGTGATGATAATGTATTTTCTTGTTCTATTATGTAA

mRNA sequence

ATGACAGTAGAAACAAATAAAGAGAGTTCAAAAGTGATAGTGAAGGGAATAGTGGATCCTCCAAAGCTAGTGGAATGTATTAAAAAGAAAATGGGAAAAAATGTTGAAATGTTCAATAAAAAACAAGAGAAACAAAGCCAACCTAATAAAGCTTCAGATCAAGACAAACCAGCCAACAAGAAAGATGCAAATCAAGACAATGAAAATTTTGTATTTAAATATCCTCCTCAATACTCTTTGCTTCATATTTACCCTAATCAAACTTTTAGTGATGATAATGTATTTTCTTGTTCTATTATGTAA

Coding sequence (CDS)

ATGACAGTAGAAACAAATAAAGAGAGTTCAAAAGTGATAGTGAAGGGAATAGTGGATCCTCCAAAGCTAGTGGAATGTATTAAAAAGAAAATGGGAAAAAATGTTGAAATGTTCAATAAAAAACAAGAGAAACAAAGCCAACCTAATAAAGCTTCAGATCAAGACAAACCAGCCAACAAGAAAGATGCAAATCAAGACAATGAAAATTTTGTATTTAAATATCCTCCTCAATACTCTTTGCTTCATATTTACCCTAATCAAACTTTTAGTGATGATAATGTATTTTCTTGTTCTATTATGTAA

Protein sequence

MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANKKDANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM

Homology

[Close]

BLAST of HG10010686 vs. NCBI nr
Match: XP_038875116.1 (heavy metal-associated isoprenylated plant protein 8-like [Benincasa hispida])

HSP 1 Score: 144.4 bits (363), Expect = 5.2e-31
Identity = 79/101 (78.22%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPA-N 60
           MTVETNKESSKVIVKG VD PKLV+ IKKKMGKNVE F+KKQEKQSQP ++  + KPA N
Sbjct: 115 MTVETNKESSKVIVKGTVDAPKLVKYIKKKMGKNVEFFDKKQEKQSQPKES--ESKPANN 174

Query: 61  KKDANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KKD+NQD EN + KYPPQYSL+HIY +QTFSDDNVFSCSIM
Sbjct: 175 KKDSNQDKENVISKYPPQYSLVHIYLDQTFSDDNVFSCSIM 213

[Close]

BLAST of HG10010686 vs. NCBI nr
Match: XP_008460190.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo] >KAA0039828.1 heavy metal-associated isoprenylated plant protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 7.0e-28
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VETN+ESSKVIVKG++DPPKL+ECIKKKMGK VE+ N K++          +DK  N 
Sbjct: 150 MRVETNRESSKVIVKGMIDPPKLMECIKKKMGKEVEILNNKKD-------GKPEDKSNNN 209

Query: 61  KDANQDN-ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N++  +NF FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 210 KDSNEEKLDNFAFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 243

[Close]

BLAST of HG10010686 vs. NCBI nr
Match: KAE8646758.1 (hypothetical protein Csa_005466 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VET++ESSKVIVKG++DPPKL+ECIKK+MGK VE+FNKK E           DK +N 
Sbjct: 259 MRVETDRESSKVIVKGMIDPPKLMECIKKRMGKKVEIFNKKSE-----------DKSSNN 318

Query: 61  KDANQDN--ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N  +  ++F FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 319 KDSNVQHKLDHFTFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 349

[Close]

BLAST of HG10010686 vs. NCBI nr
Match: XP_031744129.1 (heavy metal-associated isoprenylated plant protein 8 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VET++ESSKVIVKG++DPPKL+ECIKK+MGK VE+FNKK E           DK +N 
Sbjct: 170 MRVETDRESSKVIVKGMIDPPKLMECIKKRMGKKVEIFNKKSE-----------DKSSNN 229

Query: 61  KDANQDN--ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N  +  ++F FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 230 KDSNVQHKLDHFTFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 260

[Close]

BLAST of HG10010686 vs. NCBI nr
Match: XP_023547413.1 (heavy metal-associated isoprenylated plant protein 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128.3 bits (321), Expect = 3.8e-26
Identity = 71/102 (69.61%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQ--SQPNKASDQDKPA 60
           M VE ++ESSKV VKGIVDPPKLVE IKKKM KNVE+ NKKQEK+  S        +   
Sbjct: 144 MAVEADRESSKVRVKGIVDPPKLVEAIKKKMKKNVEVVNKKQEKEEKSANKPGGGGNNNN 203

Query: 61  NKKDANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           N KD  Q+ ENF FKYPPQYSL HIYPNQTFSDDNVFSCSIM
Sbjct: 204 NNKDGKQEKENFAFKYPPQYSLHHIYPNQTFSDDNVFSCSIM 245

[Close]

BLAST of HG10010686 vs. ExPASy Swiss-Prot
Match: Q9M8T7 (Heavy metal-associated isoprenylated plant protein 8 OS=Arabidopsis thaliana OX=3702 GN=HIPP08 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-17
Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 2   TVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANKK 61
           +VE ++  S V+V+G++DPPKLVE IKKK+GK+ E+ ++  EK    NK     K  NKK
Sbjct: 155 SVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGKHAELLSQITEKGKDNNK-----KNNNKK 214

Query: 62  DANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           + +  N+  +F YPPQYS  H YP+Q FSD+NV SCSIM
Sbjct: 215 EESDGNK--IFSYPPQYSSQHAYPSQIFSDENVHSCSIM 246

[Close]

BLAST of HG10010686 vs. ExPASy TrEMBL
Match: A0A5A7TA65 (Heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001030 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.4e-28
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VETN+ESSKVIVKG++DPPKL+ECIKKKMGK VE+ N K++          +DK  N 
Sbjct: 150 MRVETNRESSKVIVKGMIDPPKLMECIKKKMGKEVEILNNKKD-------GKPEDKSNNN 209

Query: 61  KDANQDN-ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N++  +NF FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 210 KDSNEEKLDNFAFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 243

[Close]

BLAST of HG10010686 vs. ExPASy TrEMBL
Match: A0A1S3CBZ1 (heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=LOC103499075 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.4e-28
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VETN+ESSKVIVKG++DPPKL+ECIKKKMGK VE+ N K++          +DK  N 
Sbjct: 150 MRVETNRESSKVIVKGMIDPPKLMECIKKKMGKEVEILNNKKD-------GKPEDKSNNN 209

Query: 61  KDANQDN-ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N++  +NF FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 210 KDSNEEKLDNFAFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 243

[Close]

BLAST of HG10010686 vs. ExPASy TrEMBL
Match: A0A0A0KFC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094150 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANK 60
           M VET++ESSKVIVKG++DPPKL+ECIKK+MGK VE+FNKK E           DK +N 
Sbjct: 170 MRVETDRESSKVIVKGMIDPPKLMECIKKRMGKKVEIFNKKSE-----------DKSSNN 229

Query: 61  KDANQDN--ENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           KD+N  +  ++F FKYPPQYSLLHIYPNQTFSDDNVFSCSIM
Sbjct: 230 KDSNVQHKLDHFTFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 260

[Close]

BLAST of HG10010686 vs. ExPASy TrEMBL
Match: A0A6J1JSS5 (heavy metal-associated isoprenylated plant protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111488031 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 71/108 (65.74%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQ-PNK-------AS 60
           M VE ++ESSKV VKGIVDPPKLVE IKKKM KNVE+ NKKQEK+ +  NK         
Sbjct: 110 MAVEADRESSKVRVKGIVDPPKLVEAIKKKMKKNVEVVNKKQEKEEKSANKPGGGGGGGG 169

Query: 61  DQDKPANKKDANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           + +   + KD  Q+ ENF FKYPPQYSL HIYPNQTFSDDNVFSCSIM
Sbjct: 170 NDNNNNHNKDGKQEKENFAFKYPPQYSLHHIYPNQTFSDDNVFSCSIM 217

[Close]

BLAST of HG10010686 vs. ExPASy TrEMBL
Match: A0A6J1GPB4 (heavy metal-associated isoprenylated plant protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111456286 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.7e-25
Identity = 70/105 (66.67%), Postives = 78/105 (74.29%), Query Frame = 0


Query: 1   MTVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQ-PNK----ASDQD 60
           M VE ++ESSKV VKGIVDPPKLVE IKKKM KNVE+ NKKQEK+ +  NK        +
Sbjct: 144 MAVEADRESSKVRVKGIVDPPKLVEAIKKKMKKNVEVVNKKQEKEEKSANKPGGGGGGNN 203

Query: 61  KPANKKDANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
              N +D  Q+ EN  FKYPPQYSL HIYPNQTFSDDNVFSCSIM
Sbjct: 204 NNLNNQDGKQEKENLAFKYPPQYSLHHIYPNQTFSDDNVFSCSIM 248

[Close]

BLAST of HG10010686 vs. TAIR 10
Match: AT3G02960.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-18
Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 2   TVETNKESSKVIVKGIVDPPKLVECIKKKMGKNVEMFNKKQEKQSQPNKASDQDKPANKK 61
           +VE ++  S V+V+G++DPPKLVE IKKK+GK+ E+ ++  EK    NK     K  NKK
Sbjct: 155 SVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGKHAELLSQITEKGKDNNK-----KNNNKK 214

Query: 62  DANQDNENFVFKYPPQYSLLHIYPNQTFSDDNVFSCSIM 101
           + +  N+  +F YPPQYS  H YP+Q FSD+NV SCSIM
Sbjct: 215 EESDGNK--IFSYPPQYSSQHAYPSQIFSDENVHSCSIM 246

The following BLAST results are available for this feature:

BLAST of HG10010686 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875116.1	5.2e-31	78.22	heavy metal-associated isoprenylated plant protein 8-like [Benincasa hispida]	[more]
XP_008460190.1	7.0e-28	68.32	PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo] >...	[more]
KAE8646758.1	3.5e-27	67.65	hypothetical protein Csa_005466 [Cucumis sativus]	[more]
XP_031744129.1	3.5e-27	67.65	heavy metal-associated isoprenylated plant protein 8 [Cucumis sativus]	[more]
XP_023547413.1	3.8e-26	69.61	heavy metal-associated isoprenylated plant protein 8 [Cucurbita pepo subsp. pepo...	[more]

BLAST of HG10010686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8T7	2.6e-17	50.51	Heavy metal-associated isoprenylated plant protein 8 OS=Arabidopsis thaliana OX=...	[more]

BLAST of HG10010686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TA65	3.4e-28	68.32	Heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo var. makuwa...	[more]
A0A1S3CBZ1	3.4e-28	68.32	heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KFC0	1.7e-27	67.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094150 PE=3 SV=1	[more]
A0A6J1JSS5	1.2e-25	65.74	heavy metal-associated isoprenylated plant protein 8 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GPB4	2.7e-25	66.67	heavy metal-associated isoprenylated plant protein 8-like OS=Cucurbita moschata ...	[more]

BLAST of HG10010686 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02960.1	1.8e-18	50.51	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 1..45 e-value: 5.0E-5 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..68
None	No IPR available	PANTHER	PTHR46195:SF17	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 8	coord: 1..100
IPR044577	Heavy metal-associated isoprenylated plant protein 4/7/8/17/18/19	PANTHER	PTHR46195	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010686.1	HG10010686.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding