HG10010665 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010665
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncalmodulin-binding transcription activator 4
LocationChr06: 24593403 .. 24595287 (-)
RNA-Seq ExpressionHG10010665
SyntenyHG10010665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACGCGGGTAAGTAATGGAGTCAGCAGTTTTTTTTTTTTTAATTTTTTTTAATTTTTTATTGAGTAAGTTTCGCAGAATATGGTTTTAACTAGTATTGGAAATGTTGCTCGCTGAATGTACAAAGTGTACGGTGGAAGTTATTTGTGATGATTGGTTCGTGTTTGATGAAGTGCTAGGTCATATTTCAGTTCTAGTGACATAAGCTGAGCTGTTTTCAGTTGATTCAGTGAAGAGGTGGCTGCGAGTTGTTGAAGTCACGTGTTTATCAAAAATTAACCCTCAAGCTACTGGGAATTGGCCTGTATTTGAATTAAAATGAAGGATTGTAAAAAACTGGAAAGAAACGGTGATGCTTTTAAGTTAATTTAAGACAATATATTTTCAGTAGCTTCGTTAAGTCTTACATTTTTTATATATTTCTTTTTCTTGCGCAGAATAATTAAGTATTTGGAAACTTTGATCCTTTGCACTCTAGTTTCTTGCGTGTATTTCGATCCTACTAAATGTTTTTCATTCTCAAAATAGCTGACCATGTATCTGATAGTGATTCATAAGTATGAAGGAAAAATGTTTTCTGCACAATCAGACAGCTAAGGTTTTGCTTCAGGACATCATTCTTTCGTATTTTGATGAATGTATTTTTATTTATTTATTTGATAAAAGACAACTTTTATTGAGAAAAAAAGAAAGAATATTAGGGCATACAAAATTGACGAATGTTACATGTAGCCCGATTAACTTAAAAATTTGTTTAAGTTGTTTGATTTTCCGCATGTTCATCACAGGGACTGTTGTGATATGATTCGGGAGGCCCTCCTCCATCAGCCCTTTCGAGAGAATGGTTGTTTTTTATGGCTTGTCGGGGTGTGCATTATATTGTGGGTGATTTGGAGGGAGCGTGGTAGTAGGGTGTTTAGAGGGTGGAGAGAGATCCTAGTGATGTTTGGTCCGTTGTTAGATTCCACGTTTTCCTTTGGGCTACGATTTCGAAAACCTTTTGTAATTATTTGTTATTCACTATTTTGTGTAGTCGACATCCCTTTTTCTTTAGTGGGATCTCCTTTTTTTTTTTTGTAGACTTGACTTTTTGTATGCCCTTGTATTCCTTCATTTTTTTATCAATGAAAGTTGTTATTTCTATTAAAAAAAACTTAGAAAATTTGTTTCACGTGCCAGCTATGCCCTCTTTCTATCTACCAGTTTGTCATCTTCGCGTGAGTAAGTTTTGTGATCAAAGTCCATTGCCCTGAAGTCCCCATGATCTCCTACATTGTATCTATACCAATTGTGTTGAGTCTCTACTTCTTTGGAACTACATTCAAGTTAACTTGGGAACTGAACTGAAATCTGTAAGCCTTTTCATATCATTATCTCAGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGCTCTTTATTTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTAAGTAACCTTTTTATCTATTATTTTCTTTGGAATGATTTTTGATGGCATAGCGTGCTAGTTGTTTTTTATACCGTTTGGATAATTATTGAACAATGGATTTGCAACAGGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCCCATGAACGACTTAAGGTTTTGTATCATGCAATCATTCCATTTAAACTCATTTTCCTATTTACCTTTTCTTCCTGCAGTAATGTACCAAGGTGTGGTTCTTGGCTAGACTAGTTTGTTTGCTTTTCTTTTCCTCCTCCTTATTAGGAAGGGATAGAGTTTGCGTAG

mRNA sequence

ATGATGAACGCGGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGCTCTTTATTTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCCCATGAACGACTTAAGGAAGGGATAGAGTTTGCGTAG

Coding sequence (CDS)

ATGATGAACGCGGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGCTCTTTATTTTACAGAATCATGAGAAATATCAGCTGACTGAGGAGGCCCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAGAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCCCATGAACGACTTAAGGAAGGGATAGAGTTTGCGTAG

Protein sequence

MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHSWRKKRDGRTVGEAHERLKEGIEFA
Homology
[Close]
BLAST of HG10010665 vs. NCBI nr
Match: XP_004140640.1 (calmodulin-binding transcription activator 4 isoform X1 [Cucumis sativus] >KGN46464.1 hypothetical protein Csa_005485 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. NCBI nr
Match: XP_038874570.1 (calmodulin-binding transcription activator 4 [Benincasa hispida] >XP_038874571.1 calmodulin-binding transcription activator 4 [Benincasa hispida] >XP_038874572.1 calmodulin-binding transcription activator 4 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 4.5e-42
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDINDLYREAQ+RWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINDLYREAQSRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. NCBI nr
Match: XP_022155420.1 (calmodulin-binding transcription activator 4 isoform X1 [Momordica charantia])

HSP 1 Score: 179.9 bits (455), Expect = 1.0e-41
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPK+PTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKKPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FR+DGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRKDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. NCBI nr
Match: XP_008459844.1 (PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 1.7e-41
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDIN LYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINYLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. NCBI nr
Match: XP_022954084.1 (calmodulin-binding transcription activator 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 176.8 bits (447), Expect = 8.5e-41
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMN GYD++DLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNDGYDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGH+WRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHNWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match: Q9FYG2 (Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana OX=3702 GN=CAMTA4 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.4e-31
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 0 

Query: 6   YDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 65
           Y+I+ LY+EA +RWLKPPEVLFILQNHE   LT  AP++PTSGSL LFNKRVL+FFR+DG
Sbjct: 36  YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95

Query: 66  HSWRKKRDGRTVGEAHERLKEG 88
           H WR+KRDGR + EAHERLK G
Sbjct: 96  HQWRRKRDGRAIAEAHERLKVG 117

[Close]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match: Q6NPP4 (Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana OX=3702 GN=CAMTA2 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 8.9e-25
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          DI  L  EAQ RWL+P E+  IL+NH+K+ +  E P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 14 DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHE+LK G
Sbjct: 74 NWRKKKDGKTVKEAHEKLKVG 94

[Close]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match: Q8GSA7 (Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana OX=3702 GN=CAMTA3 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 46/81 (56.79%), Postives = 68/81 (83.95%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          D+  +  EA+ RWL+PPE+  ILQN++++Q++ E P  P+SGS+F+F+++VLR+FR+DGH
Sbjct: 14 DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHERLK G
Sbjct: 74 NWRKKKDGKTVKEAHERLKAG 94

[Close]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match: Q9FY74 (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana OX=3702 GN=CAMTA1 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 4.4e-24
Identity = 47/81 (58.02%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          D+  L  EAQ RWL+P E+  ILQN+ K+ +  E+P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 17 DMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGH 76

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+T+ EAHE+LK G
Sbjct: 77 NWRKKKDGKTIREAHEKLKVG 97

[Close]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match: Q7XHR2 (Calmodulin-binding transcription activator CBT OS=Oryza sativa subsp. japonica OX=39947 GN=CBT PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-17
Identity = 38/79 (48.10%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 11  LYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHSWRK 70
           L  EA  RW +P E+  IL NH ++++  +   +P SG++ L++++V+R FR+DGH+W+K
Sbjct: 29  LVAEAAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKK 88

Query: 71  KRDGRTVGEAHERLKEGIE 90
           K+DGRTV EAHE+LK G E
Sbjct: 89  KKDGRTVQEAHEKLKIGNE 107

[Close]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match: A0A0A0KCA8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095310 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.5e-43
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match: A0A6J1DME8 (calmodulin-binding transcription activator 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022568 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.9e-42
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPK+PTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKKPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FR+DGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRKDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match: A0A1S3CB77 (calmodulin-binding transcription activator 4 OS=Cucumis melo OX=3656 GN=LOC103498844 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.3e-42
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMNAGYDIN LYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNAGYDINYLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGHSWRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHSWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match: A0A6J1GRG2 (calmodulin-binding transcription activator 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456456 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMN GYD++DLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNDGYDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGH+WRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHNWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match: A0A6J1GRV1 (calmodulin-binding transcription activator 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456456 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 

Query: 1  MMNAGYDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60
          MMN GYD++DLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF
Sbjct: 1  MMNDGYDVSDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRF 60

Query: 61 FRRDGHSWRKKRDGRTVGEAHERLKEG 88
          FRRDGH+WRKKRDGRTVGEAHERLK G
Sbjct: 61 FRRDGHNWRKKRDGRTVGEAHERLKVG 87

[Close]
BLAST of HG10010665 vs. TAIR 10
Match: AT1G67310.1 (Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains )

HSP 1 Score: 134.4 bits (337), Expect = 4.5e-32
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 0 

Query: 6   YDINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDG 65
           Y+I+ LY+EA +RWLKPPEVLFILQNHE   LT  AP++PTSGSL LFNKRVL+FFR+DG
Sbjct: 36  YEISTLYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDG 95

Query: 66  HSWRKKRDGRTVGEAHERLKEG 88
           H WR+KRDGR + EAHERLK G
Sbjct: 96  HQWRRKRDGRAIAEAHERLKVG 117

[Close]
BLAST of HG10010665 vs. TAIR 10
Match: AT5G64220.1 (Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains )

HSP 1 Score: 114.0 bits (284), Expect = 6.3e-26
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          DI  L  EAQ RWL+P E+  IL+NH+K+ +  E P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 14 DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHE+LK G
Sbjct: 74 NWRKKKDGKTVKEAHEKLKVG 94

[Close]
BLAST of HG10010665 vs. TAIR 10
Match: AT5G64220.2 (Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains )

HSP 1 Score: 114.0 bits (284), Expect = 6.3e-26
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          DI  L  EAQ RWL+P E+  IL+NH+K+ +  E P +P SGSLFLF+++VLR+FR+DGH
Sbjct: 14 DIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHE+LK G
Sbjct: 74 NWRKKKDGKTVKEAHEKLKVG 94

[Close]
BLAST of HG10010665 vs. TAIR 10
Match: AT2G22300.1 (signal responsive 1 )

HSP 1 Score: 113.6 bits (283), Expect = 8.3e-26
Identity = 46/81 (56.79%), Postives = 68/81 (83.95%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          D+  +  EA+ RWL+PPE+  ILQN++++Q++ E P  P+SGS+F+F+++VLR+FR+DGH
Sbjct: 14 DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHERLK G
Sbjct: 74 NWRKKKDGKTVKEAHERLKAG 94

[Close]
BLAST of HG10010665 vs. TAIR 10
Match: AT2G22300.2 (signal responsive 1 )

HSP 1 Score: 113.6 bits (283), Expect = 8.3e-26
Identity = 46/81 (56.79%), Postives = 68/81 (83.95%), Query Frame = 0 

Query: 7  DINDLYREAQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGH 66
          D+  +  EA+ RWL+PPE+  ILQN++++Q++ E P  P+SGS+F+F+++VLR+FR+DGH
Sbjct: 14 DVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGH 73

Query: 67 SWRKKRDGRTVGEAHERLKEG 88
          +WRKK+DG+TV EAHERLK G
Sbjct: 74 NWRKKKDGKTVKEAHERLKAG 94

The following BLAST results are available for this feature:
BLAST of HG10010665 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140640.11.6e-4298.85calmodulin-binding transcription activator 4 isoform X1 [Cucumis sativus] >KGN46... [more]
XP_038874570.14.5e-4297.70calmodulin-binding transcription activator 4 [Benincasa hispida] >XP_038874571.1... [more]
XP_022155420.11.0e-4196.55calmodulin-binding transcription activator 4 isoform X1 [Momordica charantia][more]
XP_008459844.11.7e-4197.70PREDICTED: calmodulin-binding transcription activator 4 [Cucumis melo][more]
XP_022954084.18.5e-4194.25calmodulin-binding transcription activator 4-like isoform X1 [Cucurbita moschata... [more]
BLAST of HG10010665 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FYG26.4e-3173.17Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q6NPP48.9e-2560.49Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q8GSA71.2e-2456.79Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9FY744.4e-2458.02Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q7XHR22.3e-1748.10Calmodulin-binding transcription activator CBT OS=Oryza sativa subsp. japonica O... [more]
BLAST of HG10010665 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCA87.5e-4398.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095310 PE=3 SV=1[more]
A0A6J1DME84.9e-4296.55calmodulin-binding transcription activator 4 isoform X1 OS=Momordica charantia O... [more]
A0A1S3CB778.3e-4297.70calmodulin-binding transcription activator 4 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A6J1GRG24.1e-4194.25calmodulin-binding transcription activator 4-like isoform X2 OS=Cucurbita moscha... [more]
A0A6J1GRV14.1e-4194.25calmodulin-binding transcription activator 4-like isoform X1 OS=Cucurbita moscha... [more]
BLAST of HG10010665 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67310.14.5e-3273.17Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains... [more]
AT5G64220.16.3e-2660.49Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains... [more]
AT5G64220.26.3e-2660.49Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains... [more]
AT2G22300.18.3e-2656.79signal responsive 1 [more]
AT2G22300.28.3e-2656.79signal responsive 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005559CG-1 DNA-binding domainSMARTSM01076CG_1_2coord: 11..90
e-value: 3.6E-25
score: 99.6
IPR005559CG-1 DNA-binding domainPFAMPF03859CG-1coord: 14..86
e-value: 3.5E-27
score: 94.5
IPR005559CG-1 DNA-binding domainPROSITEPS51437CG_1coord: 8..91
score: 46.13636
NoneNo IPR availablePANTHERPTHR23335:SF1CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4coord: 2..85
NoneNo IPR availablePANTHERPTHR23335CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTAcoord: 2..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010665.1HG10010665.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0003677 DNA binding