HG10010644 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10010644
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	major pollen allergen Ole e 6-like
Location	Chr06: 24346807 .. 24347085 (+)
RNA-Seq Expression	HG10010644
Synteny	HG10010644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGCTATGAAACTTGTTCGAAGGAATGCCTTGAAAAGGGCAATGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGGTACTTTCTCATCTTCTCTCTACATCTTTCTTCTAATATCGACCATGTTAAATTAG

mRNA sequence

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGCTATGAAACTTGTTCGAAGGAATGCCTTGAAAAGGGCAATGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGGTACTTTCTCATCTTCTCTCTACATCTTTCTTCTAATATCGACCATGTTAAATTAG

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGCTATGAAACTTGTTCGAAGGAATGCCTTGAAAAGGGCAATGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGGTACTTTCTCATCTTCTCTCTACATCTTTCTTCTAATATCGACCATGTTAAATTAG

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEEVDKYEAKFDAKYKSCYETCSKECLEKGNGESFCEVKCDEDCDEKETAGTFSSSLYIFLLISTMLN

Homology

[Close]

BLAST of HG10010644 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVDKYEAKFDAKYKSCYETCSKECLEKGNGESFC 60
          MAKKMIAVFLM IVV+AALQF TANEEV KYEAKFDAKYKSCYETC KECLEKGNG+SFC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60

Query: 61 EVKCDEDCDEKETA 75
          EVKCDEDCDEKETA
Sbjct: 61 EVKCDEDCDEKETA 74

[Close]

BLAST of HG10010644 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 1.9e-27
Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVDKYEAKFDAKYKSCYETCSKECLEKGNGESFC 60
          MAKKMIAVF M IVV+AALQFATANEEVDKYEAKFDAKYKSCYETC KECLE G+G++FC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60

Query: 61 EVKCDEDCDEKETAGTFSSSLY 83
          EVKCDEDCDEKE A      L+
Sbjct: 61 EVKCDEDCDEKEKADKLHIELH 82

[Close]

BLAST of HG10010644 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 5.4e-27
Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVDKYEAKFDAKYKSCYETCSKECLEKGNGESFC 60
          MAKK+IAVF M IVV+AA QFATANEEV+KYEAKF+AKYKSCYETC KECLE GNG+SFC
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATANEEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSFC 60

Query: 61 EVKCDEDCDEKETAGTFSSSLY 83
          EVKCDEDCDEKETA      L+
Sbjct: 61 EVKCDEDCDEKETADKLHIELH 82

[Close]

BLAST of HG10010644 vs. NCBI nr
Match: XP_038906482.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVDKYEAKFDAKYKSCYETCSKECLEKGNGESFC 60
          MAKK+IA+FLM IVV+ ALQF TANEEVDKYEAKF+AKYKSCYETC KECL+  NG+SFC
Sbjct: 1  MAKKIIAMFLMCIVVMGALQFGTANEEVDKYEAKFEAKYKSCYETCEKECLQNSNGQSFC 60

Query: 61 EVKCDEDCDEKETA 75
          EVKCDEDCDEKE A
Sbjct: 61 EVKCDEDCDEKEVA 74

[Close]

BLAST of HG10010644 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-25
Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANE-EVDKYEAKFDAKYKSCYETCSKECLEKGNGESF 60
          MAKKM+AVFLM IVVVAALQFATANE EV KYEAKFDAKYKSCYETC KECL  G+G+SF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCDEKETAGTFSSSLY 83
          CEVKCDEDCDEKE A      L+
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKLH 83

[Close]

BLAST of HG10010644 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-08
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0


Query: 36 DAKYKSCYETCSKECLEKGNGESFCEVKCDEDCDEKE 73
          +A++K CY+TC KEC +KGNG +FCE+KCD DC  K+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKD 38

[Close]

BLAST of HG10010644 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 65/84 (77.38%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANE--EVDKYEAKFDAKYKSCYETCSKECLEKG-NGE 60
          MAKKM+AVFLM IV+VA LQFA A E  EV KYEAKFDAKYKSCYETC KECL+KG NG+
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCDEKETAGTFSSSL 82
          SFCEVKCDEDC EKE AG    SL
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

[Close]

BLAST of HG10010644 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVDKYEAKFDAKYKSCYETCSKECLEKGNGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV KYEAKFDAKYKSC++TC KECLE G+G+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETAGTFSSSLY 83
          +CEVKCDEDC+EKE A      L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of HG10010644 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVDKYEAKFDAKYKSCYETCSKECLEKGNGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV KYEAKFDAKYKSC++TC KECLE G+G+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETAGTFSSSLY 83
          +CEVKCDEDC+EKE A      L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of HG10010644 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-23
Identity = 61/83 (73.49%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EEVDKYEAKFDAKYKSCYETCSKECLEKGNGESF 60
          MA KMIA+FLM IVVVAALQFA AN E+V KYEAKFDAKYKSC+ETC KECL  G+G+S+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCDEKETAGTFSSSLY 83
          CEVKCDEDCDEKE A      L+
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of HG10010644 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.3e-22
Identity = 63/85 (74.12%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEE--VDKYEAKFDAKYKSCYETCSKECLEKG-NGE 60
          MAKKM+AVFLM IVVVA LQF  ANEE  V KYEAKFDAKYKSCYETC KECL    NGE
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKETAGTFSSSLY 83
          SFCEVKCDEDC EKE A      L+
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

The following BLAST results are available for this feature:

BLAST of HG10010644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906682.1	1.3e-28	91.89	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038875643.1	1.9e-27	80.49	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]
XP_038906677.1	5.4e-27	79.27	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906482.1	1.3e-25	82.43	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038891517.1	1.7e-25	79.52	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]

BLAST of HG10010644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	7.7e-08	59.46	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of HG10010644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDR1	1.0e-23	77.38	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BCS2	1.3e-23	72.62	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	1.3e-23	72.62	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KPA7	3.0e-23	73.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A0A0K9Z9	3.3e-22	74.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]

BLAST of HG10010644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 36..80 e-value: 5.0E-15 score: 56.7
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 36..73
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 42..78 e-value: 3.4E-12 score: 46.1
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..75
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10010644.1	HG10010644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen