HG10010643 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10010643
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmajor pollen allergen Ole e 6-like
LocationChr06: 24342466 .. 24342720 (+)
RNA-Seq ExpressionHG10010643
SyntenyHG10010643
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAA

mRNA sequence

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAA

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGAACAATATGAGGCTAAATTTGATGCTAAATACAAATCTTGCTATGAAACTTGTTTGAAGGAATGTCTTGAAAAGGGCAGTGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAATGAAAAAGAAGCTGCTGGTACTCCCCTCTTCTCTCTATCTTTCTTCTAA

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKEAAGTPLFSLSFF
Homology
BLAST of HG10010643 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 3.2e-26
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKKMIAVFLM IVV+AALQF TANEEV +YEAKFDAKYKSCYETC KECLEKG+G+SFC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60

Query: 61 EVKCDEDCNEKEAA 75
          EVKCDEDC+EKE A
Sbjct: 61 EVKCDEDCDEKETA 74

BLAST of HG10010643 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 7.2e-26
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKKMIAVF M IVV+AALQFATANEEV++YEAKFDAKYKSCYETC KECLE GSG++FC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60

Query: 61 EVKCDEDCNEKEAA 75
          EVKCDEDC+EKE A
Sbjct: 61 EVKCDEDCDEKEKA 74

BLAST of HG10010643 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 123.2 bits (308), Expect = 1.0e-24
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVEQYEAKFDAKYKSCYETCLKECLEKGSGESFC 60
          MAKK+IAVF M IVV+AA QFATANEEVE+YEAKF+AKYKSCYETC KECLE G+G+SFC
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATANEEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSFC 60

Query: 61 EVKCDEDCNEKEAA 75
          EVKCDEDC+EKE A
Sbjct: 61 EVKCDEDCDEKETA 74

BLAST of HG10010643 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-24
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANE-EVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MAKKM+AVFLM IVVVAALQFATANE EV +YEAKFDAKYKSCYETC KECL  GSG+SF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCNEKEAA 75
          CEVKCDEDC+EKE A
Sbjct: 61 CEVKCDEDCDEKEVA 75

BLAST of HG10010643 vs. NCBI nr
Match: KAA0039791.1 (carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa] >TYK24706.1 carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 65/84 (77.38%), Postives = 72/84 (85.71%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANE--EVEQYEAKFDAKYKSCYETCLKECLEKG-SGE 60
          MAKKM+AVFLM IV+VA LQFA A E  EV +YEAKFDAKYKSCYETC KECL+KG +G+
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCNEKEAAGTPLFSL 82
          SFCEVKCDEDC+EKEAAG  L SL
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

BLAST of HG10010643 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-07
Identity = 21/37 (56.76%), Postives = 31/37 (83.78%), Query Frame = 0

Query: 36 DAKYKSCYETCLKECLEKGSGESFCEVKCDEDCNEKE 73
          +A++K CY+TC KEC +KG+G +FCE+KCD DC+ K+
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKD 38

BLAST of HG10010643 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.2e-24
Identity = 65/84 (77.38%), Postives = 72/84 (85.71%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANE--EVEQYEAKFDAKYKSCYETCLKECLEKG-SGE 60
          MAKKM+AVFLM IV+VA LQFA A E  EV +YEAKFDAKYKSCYETC KECL+KG +G+
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCNEKEAAGTPLFSL 82
          SFCEVKCDEDC+EKEAAG  L SL
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

BLAST of HG10010643 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-24
Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAA 75
          +CEVKCDEDCNEKE A
Sbjct: 61 YCEVKCDEDCNEKEVA 76

BLAST of HG10010643 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-24
Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN--EEVEQYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKMIA+FLM IVVVAALQFA+AN  +EV +YEAKFDAKYKSC++TC KECLE GSG+S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCNEKEAA 75
          +CEVKCDEDCNEKE A
Sbjct: 61 YCEVKCDEDCNEKEVA 76

BLAST of HG10010643 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22
Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EEVEQYEAKFDAKYKSCYETCLKECLEKGSGESF 60
          MA KMIA+FLM IVVVAALQFA AN E+V +YEAKFDAKYKSC+ETC KECL  GSG+S+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCNEKEAA 75
          CEVKCDEDC+EKEAA
Sbjct: 61 CEVKCDEDCDEKEAA 75

BLAST of HG10010643 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-21
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0

Query: 1  MAKKMIAVFLMFIVVVAALQFATANEEVE--QYEAKFDAKYKSCYETCLKECLEKGSGES 60
          MAKKM+AVFLM IVVV +LQFATAN+E E   YEAKFDAKYK+C+ TC KEC+E+GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 FCEVKCDEDCNEKEAA 75
          +CEVKCDEDC  KEAA
Sbjct: 61 YCEVKCDEDCGAKEAA 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906682.13.2e-2686.49major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038875643.17.2e-2685.14major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol... [more]
XP_038906677.11.0e-2482.43major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038891517.12.3e-2485.33major pollen allergen Ole e 6-like [Benincasa hispida][more]
KAA0039791.11.5e-2377.38carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa] >TYK24706.1 caroten... [more]
Match NameE-valueIdentityDescription
O241722.0e-0756.76Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7TDR17.2e-2477.38Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BCS29.4e-2480.26Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5309.4e-2480.26major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0KPA71.0e-2280.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1[more]
A0A0A0KDP72.0e-2175.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 36..77
e-value: 2.1E-14
score: 54.8
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 36..72
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 42..75
e-value: 2.0E-11
score: 43.7
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..74
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10010643.1HG10010643.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0051213 dioxygenase activity